Rmu_sc0019499.1_g000001

Receptor protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0019499.1
Physical Location & Seq
Reverse (-)
2 .. 528
527 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0019499.1_g000001.1.cds

Sequence Viewer

Length: 527 bp
atggtaatgtctcccattattcttcacattattctcatcttcctcctctgctccacttgttgcggaagcggaaatggtgatcttgaagcgctgctgaagctcaaggcctccatgattggtcccaaaggttccggccttcacgattggaaaacgacgtcgttgatgtctccctcggcgcactgtctatttactggggttacatgcgacggcgaattccgagtagtggctctcaacgtgtcgggtctgcctctgttcggaaaggttgcgccggagattgggcttctcactaaggtcgtgaacctcacaatcgccgacaacaacttcactgggaagcttccggcggagataggcaatctgacggctctgaggcacttgaacatttctaacaacttgttcgtcggaaagttccccggagaaatcacgacgcggatgacggagctggaggtcatcgacgcctataacaacaacttcaatggcccacttcccgtcgagctcatcagtctcaaaaatctcaaatatcttcatct

Protein Analysis

176

Amino Acids

18.96

Weight (kDa)

6.94

Isoelectric Point (pI)

31.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000461)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G75820
fragaria_vesca FvH4_2g38230 FvH4_2g38230
malus_domestica MD05G1138900.v1.1 MD05G1139100.v1.1 MD05G1139200.v1.1 MD08G1010700.v1.1 MD08G1241800.v1.1 MD15G1010800.v1.1
prunus_persica Prupe.1G363300_v2.0.a1 Prupe.6G163000_v2.0.a1
pyrus_communis pycom05g13420 pycom05g13430 pycom08g00930 pycom15g00920
rosa_chinensis RchiOBHm_Chr2g0118991 RchiOBHm_Chr2g0119001 RchiOBHm_Chr2g0119031 RchiOBHm_Chr2g0119041 RchiOBHm_Chr2g0119051 RchiOBHm_Chr2g0119091 RchiOBHm_Chr2g0119101 RchiOBHm_Chr2g0119111 RchiOBHm_Chr2g0120661 RchiOBHm_Chr2g0173321 RchiOBHm_Chr3g0478281 RchiOBHm_Chr4g0421131 RchiOBHm_Chr6g0303151
rosa_laevigata RLG00000011084 RLG00000011103 RLG00000018441 RLG00000018445 RLG00000018565 RLG00000018566 RLG00000018567 RLG00000018568 RLG00000018571
rosa_multiflora Rmu_co8157004.1_g000001 Rmu_co8277963.1_g000001 Rmu_co8302039.1_g000001 Rmu_co8360703.1_g000001 Rmu_co8384839.1_g000001 Rmu_sc0000319.1_g000027 Rmu_sc0001653.1_g000012 Rmu_sc0001653.1_g000013 Rmu_sc0001653.1_g000021 Rmu_sc0001822.1_g000002 Rmu_sc0001822.1_g000008 Rmu_sc0001822.1_g000030 Rmu_sc0001844.1_g000003 Rmu_sc0008911.1_g000007 Rmu_sc0019499.1_g000001 Rmu_sc0025689.1_g000001
rosa_roxburghii Rroxscaffold_2G00123240 Rroxscaffold_2G00123260 Rroxscaffold_2G00124530 Rroxscaffold_7G00164970 Rroxscaffold_7G00192210
rosa_rugosa Rorug02G0220100 Rorug02G0220200 Rorug02G0230200 Rorug02G0230300 Rorug06G0319400
rosa_samantha Rh2AG277100 Rh2AG277200 Rh2AG277700 Rh2AG277800 Rh2AG278100 Rh2AG278300 Rh2AG286600 Rh2BG289000 Rh2BG289200 Rh2BG298100 Rh2BG298200 Rh2CG275700 Rh2CG275900 Rh2CG623600 Rh2DG284200 Rh2DG303300 Rh2DG303400 Rh2DG303500 Rh2DG312000 Rh2DG312100 Rh6AG433400 Rh6BG469300 Rh6CG445900 Rh6DG432500
rosa_wichuraiana Rw2G022080 Rw2G022990 Rw2G023000 Rw6G037580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 158
AccII CGCG 1 cut(s) 427
AciI CCGC 4 cut(s) 63, 69, 341, 427
AcsI RAATTY 1 cut(s) 212
AcuI CTGAAG 1 cut(s) 116
AcyI GRCGYC 2 cut(s) 155, 453
AfeI AGCGCT 1 cut(s) 90
AfiI CCNNNNNNNGG 3 cut(s) 223, 254, 275
AflIII ACRYGT 1 cut(s) 234
AgsI TTSAA 3 cut(s) 86, 376, 472
AluBI AGCT 4 cut(s) 100, 334, 439, 493
AluI AGCT 4 cut(s) 100, 334, 439, 493
Alw21I GWGCWC 1 cut(s) 495
Alw26I GTCTC 3 cut(s) 15, 171, 506
Aor51HI AGCGCT 1 cut(s) 90
AoxI GGCC 3 cut(s) 105, 133, 475
ApeKI GCWGC 1 cut(s) 91
ApoI RAATTY 1 cut(s) 212
AspLEI GCGC 3 cut(s) 91, 178, 268
AspS9I GGNCC 2 cut(s) 119, 476
AsuC2I CCSGG 1 cut(s) 411
AsuHPI GGTGA 1 cut(s) 89
AvaII GGWCC 1 cut(s) 119
BanII GRGCYC 1 cut(s) 495
Bbv12I GWGCWC 1 cut(s) 495
BbvI GCAGC 1 cut(s) 78
BceAI ACGGC 2 cut(s) 223, 375
BcnI CCSGG 1 cut(s) 411
BcoDI GTCTC 3 cut(s) 15, 171, 506
BfoI RGCGCY 1 cut(s) 92
BisI GCNGC 1 cut(s) 92
BlsI GCNGC 1 cut(s) 93
Bme1390I CCNGG 1 cut(s) 411
Bme18I GGWCC 1 cut(s) 119
BmgT120I GGNCC 2 cut(s) 119, 476
BmiI GGNNCC 2 cut(s) 121, 130
BmrFI CCNGG 1 cut(s) 411
BmrI ACTGGG 2 cut(s) 201, 336
BmuI ACTGGG 2 cut(s) 201, 336
BpmI CTGGAG 1 cut(s) 461
BpuEI CTTGAG 1 cut(s) 86
BpuMI CCSGG 1 cut(s) 411
BsaHI GRCGYC 2 cut(s) 155, 453
BsaJI CCNNGG 2 cut(s) 171, 409
Bsc4I CCNNNNNNNGG 3 cut(s) 223, 254, 275
Bse1I ACTGG 2 cut(s) 196, 331
BseDI CCNNGG 2 cut(s) 171, 409
BseGI GGATG 1 cut(s) 435
BseLI CCNNNNNNNGG 3 cut(s) 223, 254, 275
BseMII CTCAG 1 cut(s) 356
BseNI ACTGG 2 cut(s) 196, 331
BseRI GAGGAG 1 cut(s) 35
BseXI GCAGC 1 cut(s) 78
Bsh1236I CGCG 1 cut(s) 427
BshFI GGCC 3 cut(s) 107, 135, 477
BsiHKAI GWGCWC 1 cut(s) 495
BsiSI CCGG 4 cut(s) 132, 269, 338, 411
BslFI GGGAC 1 cut(s) 105
BslI CCNNNNNNNGG 3 cut(s) 223, 254, 275
BsmAI GTCTC 3 cut(s) 15, 171, 506
BsmFI GGGAC 1 cut(s) 105
BsnI GGCC 3 cut(s) 107, 135, 477
Bsp1286I GDGCHC 1 cut(s) 495
Bsp143I GATC 1 cut(s) 79
BspACI CCGC 4 cut(s) 63, 69, 341, 427
BspANI GGCC 3 cut(s) 107, 135, 477
BspCNI CTCAG 1 cut(s) 357
BspFNI CGCG 1 cut(s) 427
BspLI GGNNCC 2 cut(s) 121, 130
BsrI ACTGG 2 cut(s) 196, 331
BssECI CCNNGG 2 cut(s) 171, 409
BssMI GATC 1 cut(s) 79
BssNI GRCGYC 2 cut(s) 155, 453
Bst4CI ACNGT 1 cut(s) 182
BstACI GRCGYC 2 cut(s) 155, 453
BstDEI CTNAG 2 cut(s) 288, 365
BstF5I GGATG 1 cut(s) 435
BstFNI CGCG 1 cut(s) 427
BstH2I RGCGCY 1 cut(s) 92
BstHHI GCGC 3 cut(s) 91, 178, 268
BstKTI GATC 1 cut(s) 82
BstMAI GTCTC 3 cut(s) 15, 171, 506
BstMBI GATC 1 cut(s) 79
BstMWI GCNNNNNNNGC 1 cut(s) 97
BstNSI RCATGY 1 cut(s) 204
BstSCI CCNGG 1 cut(s) 409
BstUI CGCG 1 cut(s) 427
BstV1I GCAGC 1 cut(s) 78
BsuRI GGCC 3 cut(s) 107, 135, 477
BtsCI GGATG 1 cut(s) 435
BtsIMutI CAGTG 2 cut(s) 178, 324
CfoI GCGC 3 cut(s) 91, 178, 268
Cfr13I GGNCC 2 cut(s) 119, 476
CseI GACGC 2 cut(s) 433, 461
CviAII CATG 2 cut(s) 112, 201
DdeI CTNAG 2 cut(s) 288, 365
DpnI GATC 1 cut(s) 81
DpnII GATC 1 cut(s) 79
EciI GGCGGA 1 cut(s) 356
Ecl136II GAGCTC 1 cut(s) 493
Eco147I AGGCCT 1 cut(s) 107
Eco24I GRGCYC 1 cut(s) 495
Eco47I GGWCC 1 cut(s) 119
Eco47III AGCGCT 1 cut(s) 90
Eco53kI GAGCTC 1 cut(s) 493
Eco57I CTGAAG 1 cut(s) 116
EcoICRI GAGCTC 1 cut(s) 493
EcoRI GAATTC 1 cut(s) 212
EcoT38I GRGCYC 1 cut(s) 495
FaeI CATG 2 cut(s) 115, 204
FaiI YATR 3 cut(s) 113, 202, 459
FaqI GGGAC 1 cut(s) 105
FatI CATG 2 cut(s) 111, 200
Fnu4HI GCNGC 1 cut(s) 92
FokI GGATG 1 cut(s) 442
FriOI GRGCYC 1 cut(s) 495
Fsp4HI GCNGC 1 cut(s) 92
GlaI GCGC 3 cut(s) 90, 177, 267
GluI GCNGC 1 cut(s) 92
GsuI CTGGAG 1 cut(s) 461
HaeII RGCGCY 1 cut(s) 92
HaeIII GGCC 3 cut(s) 107, 135, 477
HapII CCGG 4 cut(s) 132, 269, 338, 411
HgaI GACGC 2 cut(s) 433, 461
HhaI GCGC 3 cut(s) 91, 178, 268
Hin1I GRCGYC 2 cut(s) 155, 453
Hin1II CATG 2 cut(s) 115, 204
Hin6I GCGC 3 cut(s) 89, 176, 266
HinP1I GCGC 3 cut(s) 89, 176, 266
HindIII AAGCTT 1 cut(s) 332
HpaII CCGG 4 cut(s) 132, 269, 338, 411
HphI GGTGA 1 cut(s) 89
Hpy166II GTNNAC 1 cut(s) 298
Hpy188I TCNGA 5 cut(s) 218, 257, 357, 366, 401
Hpy188III TCNNGA 4 cut(s) 83, 140, 295, 421
Hpy8I GTNNAC 1 cut(s) 298
Hpy99I CGWCG 7 cut(s) 157, 160, 209, 401, 427, 455, 491
HpyAV CCTTC 1 cut(s) 146
HpyCH4III ACNGT 1 cut(s) 182
HpyCH4IV ACGT 2 cut(s) 155, 234
HpyF10VI GCNNNNNNNGC 1 cut(s) 97
HpyF3I CTNAG 2 cut(s) 288, 365
HpySE526I ACGT 2 cut(s) 155, 234
Hsp92I GRCGYC 2 cut(s) 155, 453
Hsp92II CATG 2 cut(s) 115, 204
HspAI GCGC 3 cut(s) 89, 176, 266
Kzo9I GATC 1 cut(s) 79
LmnI GCTCC 2 cut(s) 56, 436
LpnPI CCDG 7 cut(s) 145, 177, 282, 312, 351, 424, 425
Lsp1109I GCAGC 1 cut(s) 78
MaeII ACGT 2 cut(s) 155, 234
MaeIII GTNAC 1 cut(s) 196
MalI GATC 1 cut(s) 81
MboI GATC 1 cut(s) 79
MboII GAAGA 3 cut(s) 14, 31, 512
MhlI GDGCHC 1 cut(s) 495
MluCI AATT 1 cut(s) 212
MmeI TCCRAC 1 cut(s) 379
MnlI CCTC 8 cut(s) 53, 56, 118, 181, 258, 311, 360, 436
MspI CCGG 4 cut(s) 132, 269, 338, 411
MspR9I CCNGG 1 cut(s) 411
MvnI CGCG 1 cut(s) 427
MwoI GCNNNNNNNGC 1 cut(s) 97
NciI CCSGG 1 cut(s) 411
NdeII GATC 1 cut(s) 79
NlaIII CATG 2 cut(s) 115, 204
NlaIV GGNNCC 2 cut(s) 121, 130
NmeAIII GCCGAG 1 cut(s) 152
NspI RCATGY 1 cut(s) 204
PceI AGGCCT 1 cut(s) 107
PkrI GCNGC 1 cut(s) 93
Psp124BI GAGCTC 1 cut(s) 495
PspN4I GGNNCC 2 cut(s) 121, 130
PspPI GGNCC 2 cut(s) 119, 476
SacI GAGCTC 1 cut(s) 495
SatI GCNGC 1 cut(s) 92
Sau3AI GATC 1 cut(s) 79
Sau96I GGNCC 2 cut(s) 119, 476
ScrFI CCNGG 1 cut(s) 411
SduI GDGCHC 1 cut(s) 495
SinI GGWCC 1 cut(s) 119
SmlI CTYRAG 1 cut(s) 101
SmoI CTYRAG 1 cut(s) 101
Sse9I AATT 1 cut(s) 212
SseBI AGGCCT 1 cut(s) 107
SsiI CCGC 4 cut(s) 63, 69, 341, 427
SstI GAGCTC 1 cut(s) 495
StuI AGGCCT 1 cut(s) 107
StyD4I CCNGG 1 cut(s) 409
TaaI ACNGT 1 cut(s) 182
TaiI ACGT 2 cut(s) 158, 237
TaqI TCGA 2 cut(s) 450, 489
TasI AATT 1 cut(s) 212
TscAI CASTG 2 cut(s) 185, 331
TseI GCWGC 1 cut(s) 91
TspDTI ATGAA 1 cut(s) 512
TspGWI ACGGA 1 cut(s) 449
TspRI CASTG 2 cut(s) 185, 331
VpaK11BI GGWCC 1 cut(s) 119
XapI RAATTY 1 cut(s) 212
XceI RCATGY 1 cut(s) 204
ZraI GACGTC 1 cut(s) 156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.