Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0000461

Physical Location & Seq

Genomic Coordinates Reverse (-)

57036528 .. 57039517

Gene Structure 2990 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00123240.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2556 bp

ATGCTCAAGAAAGCCATGATTGGCCCCAAAGGTTCAGGGCTAGAGAACTGGGACCCCTCTTCTTATTACTACTGCTCCTTCTCTGGAGTTTCATGTGACCACCAATCACGAGTTGTTGCTCTCAACGTGTCCGGTTTGCCTCTGTTTGGCTCGCTTCCGGCGGAGATTGGGCTTCTGAACAAGCTCGTCAACCTCACCATTGCCAACAACAACTTAACAGGGAGTCTTCCCCGGGAGATGGCCAACCTGACTTGTTTAAAGCTCATGAACATCTCCACCAACTTGTTCGTTGGAAGATTTCCTGGAGAAATCACGCTCAGAATGATAGAGCTTGAGGTTCTCGACGCCTATAATAACAACTTCACGGGTCCACTTCCTGTTGAGCTCGTCAAACTCAAAAAGATCAAACATCTACATCTTGGCGGGAACTTCTTCGCCGGAGAAATTCCCGAAAGTTATTCAAAGATTCAAAGCTTAGAATATTTGGGCCTGCAATTTAACTCACTTGGCGGAAAGTTTTCGCCCAGCTTGGCTCTGTTGAAGAATCTCAAGGAATTGTACGTTGGTTATGCCAACACTTATAGCGGTGGAATTCCACCTGAGTTGGGAACGATGGGGTCATTGCAAGTGCTTGACATGGCCAGCTGTAACCTCACCGGCACGATTCCGGCCAGTCTAGGCTTTTTGAAGAACTTACACACGTTGTTTCTACATATTAACCATTTGAGTGGTTATATACCTCCACAACTTTCAGGTATGGTGAGTCTGATGTCTTTGGATCTCTCTATAAACGAACTCACCGGAGAAATACCAGAAAGTCTCTCAGAGCTCAAGAACCTTACCCTACTCAACCTGCATAAGAACAATTTTTACGGCCCGATACCCAACTTCATCGGCGATCTTCCTCATCTGGAGGTGCTTCAACTTTGGGAGAACAACTTTACATTTGAACTACCTGAGAGTCTTGGCCGGAATGGAAGGCTCAAATGCCTCGATGTAGCCGGTAACCACCTCACCGGGTTCATTCCTCGGGATTTGATTGGGCTGAATGATAACTACTTGTCTGGAAAACTTCCATTGCAGATGTCGGGTGCCTCACTCGAAATTCTCACACTTTCCCGGAATCAGATTTCTGGAAAAATCCCATCCACCATTGGAACCCTCAAGAATTTGAAACATCTTTCGCTCGATGGGAACAGATTCTCCGGGCAAGTACCAACAGAAATCTTCAGTTTACAATTGCTTAGTAAACTCAACATGAGCACCAACAATATTGGTGGTGAAATTCCGGCTTCAATCTCTGGTTGTTCCTCTCTGACGTTCCTAGATTTTAGTCAAAACACTTTTGTTGGGGAAATCCCAAGAGGGATAAGTAAACTGAAAGTAATTCAGTTTCTTAATTTTTCAAGGAACAAGCTAACAGGTCCAATACCTGTGGAATTCATATACATGGGGAGCCTCACAAATTTGGATCTCTCCTATAACAATTTCATTGGCAGGATCCCAGCCGGAGGTCAGTTTTTATGGTCGAATGTTTCGTTTGAAGGAAATCCCAATCTGTGTTCGGCGGAAAAGGTGTTGTGCAGCTCTGATAACTACCCACGACCTCGAGACCATAAAGTCATCATCGTTGGACTGACTGGAGCTCTTCTAACTTTGCTACTCATGTTGCTTCTTATATATGTAGTTATCAGGGTTTATAGGAAGAGGAAGACCACAAAGATATATATGAGAAATGTGGTTCAGGGTTGGAAGCTAACAGTTTTCCAAGTACAGCTCAATCTCAACATAGAAGACGTTCTCCAGTGTCTAAAAGCAGAGAACATCATCGGCAGGGGTGGTGCTGGAATTGTCTACCGGGGGACAATGCCAAATGGTGGTGATATTGCAATCAAACAGCTGCAGAGGGATCAGGGATTTTCAGCTGAAATTGAAACATTGGGACAAATCAAGCACCGAAATATAGTGCGGCTGCTGGGGTACATGTCGAACAAGGACACGAATTTGTTGCTGTACGAGTACATGCCTAACGGTAGCTTGGGACAACTTTTGCGTGGGCCTAATGGAGGGCATTTGGAGTGGGAAATCAGGTACAAGATTGCTGTGGAAGCTGCCAAGGGATTGTGTTATCTCCACCATGACTGTTCGCCTCTGATTATACACAGGGATGTAAAGTCCCATAACATCTTGCTGGACTCTGGCTTTGAAGCTCATGTTGCTGACTTTGGGCTTGCCAAGTACTTTCAAGGACCAACAGATTGCATGTCTTCGCTTGCTGGTACCTTTGGTTACATTGCCCCAGTCGATGAAGCTGTGAACCTAGTAACTTGGGTAAGGAAAACGACATCAGAAATCCCTCAGTCATCCAATGCATCATCTGTACTAGCAGTTGTGGACTCTAGGCTCAGTGAGTTCCCATTGGCAGGTGTCGAGCATATGTACAAGATAGCGATGATGTGCGTCAAGAATCACAGCTCTTCAAGACCTACAATGAGGGAAGTAGTCTACTTGCTCACTAATCCTCCTCCTTCTGCTCCAGGCATGACAAACCCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000325 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009506 GO:0009791 GO:0009888 GO:0009908 GO:0009909 GO:0009934 GO:0009987 GO:0010073 GO:0010075 GO:0010080 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022414 GO:0022603 GO:0030054 GO:0032501 GO:0032502 GO:0033612 GO:0036211 GO:0036289 GO:0040008 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046777 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048608 GO:0048638 GO:0048731 GO:0048831 GO:0048832 GO:0048833 GO:0048856 GO:0050789 GO:0050793 GO:0051239 GO:0055044 GO:0061458 GO:0065007 GO:0071704 GO:0071944 GO:0090567 GO:0140096 GO:1901564 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

851

Amino Acids

93.56

Weight (kDa)

8.48

Isoelectric Point (pI)

36.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_14	PF23598	176 - 285	2.2e-07	Leucine-rich repeat region
LRR_14	PF23598	367 - 471	1.5e-09	Leucine-rich repeat region
PK_Tyr_Ser-Thr	PF07714	605 - 748	1.4e-25	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	606 - 767	2.4e-30	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000461)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75820
fragaria_vesca	FvH4_2g38230 FvH4_2g38230
malus_domestica	MD05G1138900.v1.1 MD05G1139100.v1.1 MD05G1139200.v1.1 MD08G1010700.v1.1 MD08G1241800.v1.1 MD15G1010800.v1.1
prunus_persica	Prupe.1G363300_v2.0.a1 Prupe.6G163000_v2.0.a1
pyrus_communis	pycom05g13420 pycom05g13430 pycom08g00930 pycom15g00920
rosa_chinensis	RchiOBHm_Chr2g0118991 RchiOBHm_Chr2g0119001 RchiOBHm_Chr2g0119031 RchiOBHm_Chr2g0119041 RchiOBHm_Chr2g0119051 RchiOBHm_Chr2g0119091 RchiOBHm_Chr2g0119101 RchiOBHm_Chr2g0119111 RchiOBHm_Chr2g0120661 RchiOBHm_Chr2g0173321 RchiOBHm_Chr3g0478281 RchiOBHm_Chr4g0421131 RchiOBHm_Chr6g0303151
rosa_laevigata	RLG00000011084 RLG00000011103 RLG00000018441 RLG00000018445 RLG00000018565 RLG00000018566 RLG00000018567 RLG00000018568 RLG00000018571
rosa_multiflora	Rmu_co8157004.1_g000001 Rmu_co8277963.1_g000001 Rmu_co8302039.1_g000001 Rmu_co8360703.1_g000001 Rmu_co8384839.1_g000001 Rmu_sc0000319.1_g000027 Rmu_sc0001653.1_g000012 Rmu_sc0001653.1_g000013 Rmu_sc0001653.1_g000021 Rmu_sc0001822.1_g000002 Rmu_sc0001822.1_g000008 Rmu_sc0001822.1_g000030 Rmu_sc0001844.1_g000003 Rmu_sc0008911.1_g000007 Rmu_sc0019499.1_g000001 Rmu_sc0025689.1_g000001
rosa_roxburghii	Rroxscaffold_2G00123240 Rroxscaffold_2G00123260 Rroxscaffold_2G00124530 Rroxscaffold_7G00164970 Rroxscaffold_7G00192210
rosa_rugosa	Rorug02G0220100 Rorug02G0220200 Rorug02G0230200 Rorug02G0230300 Rorug06G0319400
rosa_samantha	Rh2AG277100 Rh2AG277200 Rh2AG277700 Rh2AG277800 Rh2AG278100 Rh2AG278300 Rh2AG286600 Rh2BG289000 Rh2BG289200 Rh2BG298100 Rh2BG298200 Rh2CG275700 Rh2CG275900 Rh2CG623600 Rh2DG284200 Rh2DG303300 Rh2DG303400 Rh2DG303500 Rh2DG312000 Rh2DG312100 Rh6AG433400 Rh6BG469300 Rh6CG445900 Rh6DG432500
rosa_wichuraiana	Rw2G022080 Rw2G022990 Rw2G023000 Rw6G037580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2414
AasI	GACNNNNNNGTC	1 cut(s)	1619
Acc36I	ACCTGC	2 cut(s)	861, 2414
Acc65I	GGTACC	1 cut(s)	2279
AccB1I	GGYRCC	2 cut(s)	1091, 2279
AccB7I	CCANNNNNTGG	1 cut(s)	1877
AccI	GTMKAC	2 cut(s)	1854, 2505
AciI	CCGC	6 cut(s)	161, 423, 510, 585, 1568, 1969
AclWI	GGATC	5 cut(s)	786, 1479, 1495, 1508, 1917
AcoI	YGGCCR	4 cut(s)	240, 639, 669, 967
AcsI	RAATTY	8 cut(s)	444, 591, 1104, 1168, 1284, 1439, 1465, 2002
AcuI	CTGAAG	1 cut(s)	1213
AcyI	GRCGYC	1 cut(s)	345
AfiI	CCNNNNNNNGG	7 cut(s)	146, 238, 605, 1511, 1877, 2066, 2423
AflIII	ACRYGT	3 cut(s)	126, 699, 1983
AjnI	CCWGG	2 cut(s)	301, 2536
AjuI	GAANNNNNNNTTGG	2 cut(s)	546, 578
AloI	GAACNNNNNNTCC	2 cut(s)	1187, 1219
Alw21I	GWGCWC	4 cut(s)	387, 831, 1265, 1648
Alw26I	GTCTC	2 cut(s)	824, 1605
AlwI	GGATC	5 cut(s)	786, 1479, 1495, 1508, 1917
Ama87I	CYCGRG	3 cut(s)	231, 1029, 1608
AoxI	GGCC	8 cut(s)	22, 240, 487, 639, 669, 874, 967, 2057
ApeKI	GCWGC	4 cut(s)	1584, 1900, 1972, 2111
ApoI	RAATTY	8 cut(s)	444, 591, 1104, 1168, 1284, 1439, 1465, 2002
ArsI	GACNNNNNNTTYG	2 cut(s)	2186, 2218
Asp700I	GAANNNNTTC	4 cut(s)	431, 517, 1199, 1797
Asp718I	GGTACC	1 cut(s)	2279
AspS9I	GGNCC	8 cut(s)	23, 52, 368, 487, 875, 1424, 2057, 2249
AsuC2I	CCSGG	6 cut(s)	232, 233, 1018, 1120, 1207, 1859
AsuHPI	GGTGA	7 cut(s)	187, 646, 772, 790, 1006, 1292, 1892
AvaI	CYCGRG	3 cut(s)	231, 1029, 1608
AvaII	GGWCC	4 cut(s)	52, 368, 1424, 2249
BalI	TGGCCA	2 cut(s)	242, 641
BamHI	GGATCC	1 cut(s)	1500
BanI	GGYRCC	2 cut(s)	1091, 2279
BanII	GRGCYC	3 cut(s)	387, 831, 1648
BauI	CACGAG	1 cut(s)	108
BbsI	GAAGAC	4 cut(s)	218, 1718, 1800, 2259
Bbv12I	GWGCWC	4 cut(s)	387, 831, 1265, 1648
BbvI	GCAGC	4 cut(s)	1596, 1887, 1959, 2098
BccI	CCATC	4 cut(s)	232, 607, 1153, 1184
BceAI	ACGGC	1 cut(s)	889
BcgI	CGANNNNNNTGC	2 cut(s)	1990, 2024
BciT130I	CCWGG	2 cut(s)	303, 2538
BcnI	CCSGG	6 cut(s)	232, 233, 1018, 1120, 1207, 1859
BcoDI	GTCTC	2 cut(s)	824, 1605
BfaI	CTAG	6 cut(s)	41, 677, 1325, 2321, 2384, 2400
BfmI	CTRYAG	1 cut(s)	1901
BfuAI	ACCTGC	2 cut(s)	861, 2414
BisI	GCNGC	5 cut(s)	1585, 1901, 1970, 1973, 2112
BlsI	GCNGC	5 cut(s)	1586, 1902, 1971, 1974, 2113
BmcAI	AGTACT	1 cut(s)	2240
Bme1390I	CCNGG	8 cut(s)	232, 233, 303, 1018, 1120, 1207, 1859, 2538
Bme18I	GGWCC	4 cut(s)	52, 368, 1424, 2249
BmeT110I	CYCGRG	3 cut(s)	231, 1029, 1608
BmgT120I	GGNCC	8 cut(s)	23, 52, 368, 487, 875, 1424, 2057, 2249
BmiI	GGNNCC	9 cut(s)	25, 53, 54, 369, 1093, 1159, 1457, 1502, 2281
BmrFI	CCNGG	8 cut(s)	232, 233, 303, 1018, 1120, 1207, 1859, 2538
BmrI	ACTGGG	2 cut(s)	58, 2294
BmsI	GCATC	1 cut(s)	2381
BmuI	ACTGGG	2 cut(s)	58, 2294
BpiI	GAAGAC	4 cut(s)	218, 1718, 1800, 2259
BpmI	CTGGAG	6 cut(s)	105, 324, 932, 1662, 1787, 2520
BpuEI	CTTGAG	4 cut(s)	353, 533, 815, 1148
BpuMI	CCSGG	6 cut(s)	232, 233, 1018, 1120, 1207, 1859
BsaHI	GRCGYC	1 cut(s)	345
BsaI	GGTCTC	1 cut(s)	1605
BsaJI	CCNNGG	5 cut(s)	230, 231, 1028, 1858, 2115
BsaWI	WCCGGW	2 cut(s)	131, 800
BsaXI	ACNNNNNCTCC	6 cut(s)	59, 89, 1187, 1217, 2506, 2536
Bsc4I	CCNNNNNNNGG	7 cut(s)	146, 238, 605, 1511, 1877, 2066, 2423
Bse118I	RCCGGY	2 cut(s)	656, 1001
Bse1I	ACTGG	5 cut(s)	53, 672, 1645, 1804, 2300
Bse3DI	GCAATG	4 cut(s)	198, 620, 1076, 2292
BseBI	CCWGG	2 cut(s)	303, 2538
BseDI	CCNNGG	5 cut(s)	230, 231, 1028, 1858, 2115
BseGI	GGATG	3 cut(s)	1145, 2173, 2363
BseLI	CCNNNNNNNGG	7 cut(s)	146, 238, 605, 1511, 1877, 2066, 2423
BseMI	GCAATG	4 cut(s)	198, 620, 1076, 2292
BseMII	CTCAG	6 cut(s)	331, 591, 837, 948, 2372, 2419
BseNI	ACTGG	5 cut(s)	53, 672, 1645, 1804, 2300
BseRI	GAGGAG	1 cut(s)	2514
BseXI	GCAGC	4 cut(s)	1596, 1887, 1959, 2098
BseYI	CCCAGC	3 cut(s)	524, 1504, 1975
BsgI	GTGCAG	1 cut(s)	1603
BshFI	GGCC	8 cut(s)	24, 242, 489, 641, 671, 876, 969, 2059
BshNI	GGYRCC	2 cut(s)	1091, 2279
BsiHKAI	GWGCWC	4 cut(s)	387, 831, 1265, 1648
BsiHKCI	CYCGRG	3 cut(s)	231, 1029, 1608
BslFI	GGGAC	5 cut(s)	65, 1876, 1956, 2055, 2161
BslI	CCNNNNNNNGG	7 cut(s)	146, 238, 605, 1511, 1877, 2066, 2423
BsmAI	GTCTC	2 cut(s)	824, 1605
BsmFI	GGGAC	5 cut(s)	65, 1876, 1956, 2055, 2161
BsnI	GGCC	8 cut(s)	24, 242, 489, 641, 671, 876, 969, 2059
Bso31I	GGTCTC	1 cut(s)	1605
BsoBI	CYCGRG	3 cut(s)	231, 1029, 1608
Bsp1286I	GDGCHC	4 cut(s)	387, 831, 1265, 1648
Bsp1407I	TGTACA	1 cut(s)	2439
Bsp143I	GATC	6 cut(s)	402, 778, 898, 1471, 1500, 1909
BspACI	CCGC	6 cut(s)	161, 423, 510, 585, 1568, 1969
BspANI	GGCC	8 cut(s)	24, 242, 489, 641, 671, 876, 969, 2059
BspCNI	CTCAG	6 cut(s)	330, 592, 836, 949, 2371, 2418
BspHI	TCATGA	1 cut(s)	264
BspLI	GGNNCC	9 cut(s)	25, 53, 54, 369, 1093, 1159, 1457, 1502, 2281
BspMAI	CTGCAG	1 cut(s)	1905
BspMI	ACCTGC	2 cut(s)	861, 2414
BspPI	GGATC	5 cut(s)	786, 1479, 1495, 1508, 1917
BspQI	GCTCTTC	2 cut(s)	1653, 2482
BspT107I	GGYRCC	2 cut(s)	1091, 2279
BspTNI	GGTCTC	1 cut(s)	1605
BsrDI	GCAATG	4 cut(s)	198, 620, 1076, 2292
BsrFI	RCCGGY	2 cut(s)	656, 1001
BsrGI	TGTACA	1 cut(s)	2439
BsrI	ACTGG	5 cut(s)	53, 672, 1645, 1804, 2300
BssAI	RCCGGY	2 cut(s)	656, 1001
BssECI	CCNNGG	5 cut(s)	230, 231, 1028, 1858, 2115
BssMI	GATC	6 cut(s)	402, 778, 898, 1471, 1500, 1909
BssNI	GRCGYC	1 cut(s)	345
BssSI	CACGAG	1 cut(s)	108
BssT1I	CCWWGG	1 cut(s)	2115
Bst2BI	CACGAG	1 cut(s)	108
Bst2UI	CCWGG	2 cut(s)	303, 2538
Bst4CI	ACNGT	3 cut(s)	1762, 2033, 2144
Bst6I	CTCTTC	4 cut(s)	64, 1653, 1700, 2482
BstACI	GRCGYC	1 cut(s)	345
BstAUI	TGTACA	1 cut(s)	2439
BstC8I	GCNNGC	5 cut(s)	152, 491, 643, 2232, 2274
BstDEI	CTNAG	9 cut(s)	317, 475, 600, 823, 957, 1244, 2358, 2405, 2553
BstEII	GGTNACC	1 cut(s)	1004
BstENI	CCTNNNNNAGG	1 cut(s)	2064
BstF5I	GGATG	3 cut(s)	1145, 2173, 2363
BstKTI	GATC	6 cut(s)	405, 781, 901, 1474, 1503, 1912
BstMAI	GTCTC	2 cut(s)	824, 1605
BstMBI	GATC	6 cut(s)	402, 778, 898, 1471, 1500, 1909
BstMWI	GCNNNNNNNGC	2 cut(s)	2108, 2216
BstNI	CCWGG	2 cut(s)	303, 2538
BstNSI	RCATGY	3 cut(s)	1987, 2026, 2266
BstPI	GGTNACC	1 cut(s)	1004
BstSCI	CCNGG	8 cut(s)	230, 231, 301, 1016, 1118, 1205, 1857, 2536
BstSFI	CTRYAG	1 cut(s)	1901
BstV1I	GCAGC	4 cut(s)	1596, 1887, 1959, 2098
BstV2I	GAAGAC	4 cut(s)	218, 1718, 1800, 2259
BstX2I	RGATCY	3 cut(s)	778, 1471, 1500
BstXI	CCANNNNNNTGG	1 cut(s)	728
BstYI	RGATCY	3 cut(s)	778, 1471, 1500
BsuRI	GGCC	8 cut(s)	24, 242, 489, 641, 671, 876, 969, 2059
BtgZI	GCGATG	1 cut(s)	2465
BtsCI	GGATG	3 cut(s)	1145, 2173, 2363
BtsIMutI	CAGTG	2 cut(s)	1811, 2413
BveI	ACCTGC	2 cut(s)	861, 2414
Cac8I	GCNNGC	5 cut(s)	152, 491, 643, 2232, 2274
CciI	TCATGA	1 cut(s)	264
Cfr10I	RCCGGY	2 cut(s)	656, 1001
Cfr13I	GGNCC	8 cut(s)	23, 52, 368, 487, 875, 1424, 2057, 2249
Cfr9I	CCCGGG	1 cut(s)	231
CseI	GACGC	2 cut(s)	353, 2449
CspCI	CAANNNNNGTGG	6 cut(s)	585, 620, 1258, 1293, 1416, 1451
DdeI	CTNAG	9 cut(s)	317, 475, 600, 823, 957, 1244, 2358, 2405, 2553
DpnI	GATC	6 cut(s)	404, 780, 900, 1473, 1502, 1911
DpnII	GATC	6 cut(s)	402, 778, 898, 1471, 1500, 1909
DraI	TTTAAA	1 cut(s)	258
DrdI	GACNNNNNNGTC	1 cut(s)	1619
DseDI	GACNNNNNNGTC	1 cut(s)	1619
EaeI	YGGCCR	4 cut(s)	240, 639, 669, 967
Eam1104I	CTCTTC	4 cut(s)	64, 1653, 1700, 2482
EarI	CTCTTC	4 cut(s)	64, 1653, 1700, 2482
EciI	GGCGGA	3 cut(s)	176, 525, 1583
Ecl136II	GAGCTC	3 cut(s)	385, 829, 1646
Eco130I	CCWWGG	1 cut(s)	2115
Eco24I	GRGCYC	3 cut(s)	387, 831, 1648
Eco31I	GGTCTC	1 cut(s)	1605
Eco47I	GGWCC	4 cut(s)	52, 368, 1424, 2249
Eco53kI	GAGCTC	3 cut(s)	385, 829, 1646
Eco57I	CTGAAG	1 cut(s)	1213
Eco88I	CYCGRG	3 cut(s)	231, 1029, 1608
Eco91I	GGTNACC	1 cut(s)	1004
EcoICRI	GAGCTC	3 cut(s)	385, 829, 1646
EcoNI	CCTNNNNNAGG	1 cut(s)	2064
EcoO109I	RGGNCCY	1 cut(s)	52
EcoO65I	GGTNACC	1 cut(s)	1004
EcoRI	GAATTC	2 cut(s)	591, 1439
EcoRII	CCWGG	2 cut(s)	301, 2536
EcoT14I	CCWWGG	1 cut(s)	2115
EcoT22I	ATGCAT	1 cut(s)	2374
EcoT38I	GRGCYC	3 cut(s)	387, 831, 1648
ErhI	CCWWGG	1 cut(s)	2115
FaqI	GGGAC	5 cut(s)	65, 1876, 1956, 2055, 2161
FauI	CCCGC	1 cut(s)	416
FauNDI	CATATG	1 cut(s)	2436
FblI	GTMKAC	2 cut(s)	1854, 2505
Fnu4HI	GCNGC	5 cut(s)	1585, 1901, 1970, 1973, 2112
FokI	GGATG	3 cut(s)	1132, 2180, 2350
FriOI	GRGCYC	3 cut(s)	387, 831, 1648
Fsp4HI	GCNGC	5 cut(s)	1585, 1901, 1970, 1973, 2112
FspBI	CTAG	6 cut(s)	41, 677, 1325, 2321, 2384, 2400
GluI	GCNGC	5 cut(s)	1585, 1901, 1970, 1973, 2112
GsaI	CCCAGC	3 cut(s)	528, 1508, 1979
GsuI	CTGGAG	6 cut(s)	105, 324, 932, 1662, 1787, 2520
HaeIII	GGCC	8 cut(s)	24, 242, 489, 641, 671, 876, 969, 2059
HgaI	GACGC	2 cut(s)	353, 2449
Hin1I	GRCGYC	1 cut(s)	345
HincII	GTYRAC	1 cut(s)	190
HindII	GTYRAC	1 cut(s)	190
HindIII	AAGCTT	1 cut(s)	472
HphI	GGTGA	7 cut(s)	187, 646, 772, 790, 1006, 1292, 1892
Hpy166II	GTNNAC	9 cut(s)	190, 371, 1235, 1250, 1376, 1855, 2317, 2395, 2506
Hpy188I	TCNGA	9 cut(s)	177, 320, 768, 826, 1128, 1317, 1591, 2154, 2350
Hpy8I	GTNNAC	9 cut(s)	190, 371, 1235, 1250, 1376, 1855, 2317, 2395, 2506
Hpy99I	CGWCG	1 cut(s)	347
HpyAV	CCTTC	4 cut(s)	88, 972, 1538, 2538
HpyCH4III	ACNGT	3 cut(s)	1762, 2033, 2144
HpyCH4IV	ACGT	5 cut(s)	126, 561, 701, 1319, 1797
HpyCH4V	TGCA	9 cut(s)	493, 625, 856, 1081, 1584, 1889, 1903, 2262, 2372
HpyF10VI	GCNNNNNNNGC	2 cut(s)	2108, 2216
HpyF3I	CTNAG	9 cut(s)	317, 475, 600, 823, 957, 1244, 2358, 2405, 2553
HpySE526I	ACGT	5 cut(s)	126, 561, 701, 1319, 1797
Hsp92I	GRCGYC	1 cut(s)	345
KflI	GGGWCCC	1 cut(s)	52
KpnI	GGTACC	1 cut(s)	2283
Kzo9I	GATC	6 cut(s)	402, 778, 898, 1471, 1500, 1909
LguI	GCTCTTC	2 cut(s)	1653, 2482
LmnI	GCTCC	4 cut(s)	80, 1455, 1643, 2539
Lsp1109I	GCAGC	4 cut(s)	1596, 1887, 1959, 2098
LweI	GCATC	1 cut(s)	2381
MaeI	CTAG	6 cut(s)	41, 677, 1325, 2321, 2384, 2400
MaeII	ACGT	5 cut(s)	126, 561, 701, 1319, 1797
MaeIII	GTNAC	5 cut(s)	95, 647, 1004, 2288, 2323
MalI	GATC	6 cut(s)	404, 780, 900, 1473, 1502, 1911
MboI	GATC	6 cut(s)	402, 778, 898, 1471, 1500, 1909
MfeI	CAATTG	1 cut(s)	1238
MflI	RGATCY	3 cut(s)	778, 1471, 1500
MhlI	GDGCHC	4 cut(s)	387, 831, 1265, 1648
MlsI	TGGCCA	2 cut(s)	242, 641
MluNI	TGGCCA	2 cut(s)	242, 641
MlyI	GAGTC	5 cut(s)	232, 772, 970, 2189, 2390
MmeI	TCCRAC	3 cut(s)	271, 1612, 1730
Mox20I	TGGCCA	2 cut(s)	242, 641
Mph1103I	ATGCAT	1 cut(s)	2374
MroXI	GAANNNNTTC	4 cut(s)	431, 517, 1199, 1797
MscI	TGGCCA	2 cut(s)	242, 641
MseI	TTAA	5 cut(s)	215, 257, 498, 717, 1398
MslI	CAYNNNNRTG	3 cut(s)	726, 1448, 2166
Msp20I	TGGCCA	2 cut(s)	242, 641
MspA1I	CMGCKG	3 cut(s)	645, 1900, 1925
MspR9I	CCNGG	8 cut(s)	232, 233, 303, 1018, 1120, 1207, 1859, 2538
MunI	CAATTG	1 cut(s)	1238
MvaI	CCWGG	2 cut(s)	303, 2538
MwoI	GCNNNNNNNGC	2 cut(s)	2108, 2216
NciI	CCSGG	6 cut(s)	232, 233, 1018, 1120, 1207, 1859
NdeI	CATATG	1 cut(s)	2436
NdeII	GATC	6 cut(s)	402, 778, 898, 1471, 1500, 1909
NlaIV	GGNNCC	9 cut(s)	25, 53, 54, 369, 1093, 1159, 1457, 1502, 2281
NmuCI	GTSAC	1 cut(s)	95
NsiI	ATGCAT	1 cut(s)	2374
NspI	RCATGY	3 cut(s)	1987, 2026, 2266
PaeR7I	CTCGAG	1 cut(s)	1608
PagI	TCATGA	1 cut(s)	264
PaqCI	CACCTGC	1 cut(s)	2414
PciI	ACATGT	1 cut(s)	1983
PciSI	GCTCTTC	2 cut(s)	1653, 2482
PcsI	WCGNNNNNNNCGW	1 cut(s)	1535
PdmI	GAANNNNTTC	4 cut(s)	431, 517, 1199, 1797
PfeI	GAWTC	6 cut(s)	466, 544, 664, 1123, 1200, 2467
PflMI	CCANNNNNTGG	1 cut(s)	1877
PfoI	TCCNGGA	2 cut(s)	301, 1118
PkrI	GCNGC	5 cut(s)	1586, 1902, 1971, 1974, 2113
PleI	GAGTC	5 cut(s)	231, 771, 969, 2189, 2390
PpsI	GAGTC	5 cut(s)	231, 771, 969, 2189, 2390
PpuMI	RGGWCCY	1 cut(s)	52
PscI	ACATGT	1 cut(s)	1983
Psp124BI	GAGCTC	3 cut(s)	387, 831, 1648
Psp5II	RGGWCCY	1 cut(s)	52
Psp6I	CCWGG	2 cut(s)	301, 2536
PspEI	GGTNACC	1 cut(s)	1004
PspFI	CCCAGC	3 cut(s)	524, 1504, 1975
PspGI	CCWGG	2 cut(s)	301, 2536
PspN4I	GGNNCC	9 cut(s)	25, 53, 54, 369, 1093, 1159, 1457, 1502, 2281
PspPI	GGNCC	8 cut(s)	23, 52, 368, 487, 875, 1424, 2057, 2249
PspPPI	RGGWCCY	1 cut(s)	52
PsrI	GAACNNNNNNTAC	2 cut(s)	854, 886
PstI	CTGCAG	1 cut(s)	1905
PsuI	RGATCY	3 cut(s)	778, 1471, 1500
PvuII	CAGCTG	3 cut(s)	645, 1900, 1925
RseI	CAYNNNNRTG	3 cut(s)	726, 1448, 2166
SacI	GAGCTC	3 cut(s)	387, 831, 1648
SapI	GCTCTTC	2 cut(s)	1653, 2482
SaqAI	TTAA	5 cut(s)	215, 257, 498, 717, 1398
SatI	GCNGC	5 cut(s)	1585, 1901, 1970, 1973, 2112
Sau3AI	GATC	6 cut(s)	402, 778, 898, 1471, 1500, 1909
Sau96I	GGNCC	8 cut(s)	23, 52, 368, 487, 875, 1424, 2057, 2249
ScaI	AGTACT	1 cut(s)	2240
SchI	GAGTC	5 cut(s)	232, 772, 970, 2189, 2390
ScrFI	CCNGG	8 cut(s)	232, 233, 303, 1018, 1120, 1207, 1859, 2538
SduI	GDGCHC	4 cut(s)	387, 831, 1265, 1648
SfaNI	GCATC	1 cut(s)	2381
SfcI	CTRYAG	1 cut(s)	1901
Sfr274I	CTCGAG	1 cut(s)	1608
SinI	GGWCC	4 cut(s)	52, 368, 1424, 2249
SlaI	CTCGAG	1 cut(s)	1608
SmaI	CCCGGG	1 cut(s)	233
SmiMI	CAYNNNNRTG	3 cut(s)	726, 1448, 2166
SmlI	CTYRAG	6 cut(s)	5, 332, 548, 830, 1163, 1608
SmoI	CTYRAG	6 cut(s)	5, 332, 548, 830, 1163, 1608
SsiI	CCGC	6 cut(s)	161, 423, 510, 585, 1568, 1969
SspI	AATATT	2 cut(s)	482, 1273
SspMI	CTAG	6 cut(s)	41, 677, 1325, 2321, 2384, 2400
SstI	GAGCTC	3 cut(s)	387, 831, 1648
StyD4I	CCNGG	8 cut(s)	230, 231, 301, 1016, 1118, 1205, 1857, 2536
StyI	CCWWGG	1 cut(s)	2115
TaaI	ACNGT	3 cut(s)	1762, 2033, 2144
TaiI	ACGT	5 cut(s)	129, 564, 704, 1322, 1800
TaqI	TCGA	9 cut(s)	342, 993, 1101, 1188, 1529, 1609, 1988, 2304, 2430
TatI	WGTACW	5 cut(s)	1771, 2019, 2238, 2380, 2439
TauI	GCSGC	1 cut(s)	1972
TfiI	GAWTC	6 cut(s)	466, 544, 664, 1123, 1200, 2467
Tru1I	TTAA	5 cut(s)	215, 257, 498, 717, 1398
Tru9I	TTAA	5 cut(s)	215, 257, 498, 717, 1398
TscAI	CASTG	2 cut(s)	1811, 2413
TseFI	GTSAC	1 cut(s)	95
TseI	GCWGC	4 cut(s)	1584, 1900, 1972, 2111
Tsp45I	GTSAC	1 cut(s)	95
TspDTI	ATGAA	7 cut(s)	81, 281, 880, 1012, 1432, 1480, 2322
TspMI	CCCGGG	1 cut(s)	231
TspRI	CASTG	2 cut(s)	1811, 2413
Van91I	CCANNNNNTGG	1 cut(s)	1877
VpaK11BI	GGWCC	4 cut(s)	52, 368, 1424, 2249
XagI	CCTNNNNNAGG	1 cut(s)	2064
XapI	RAATTY	8 cut(s)	444, 591, 1104, 1168, 1284, 1439, 1465, 2002
XceI	RCATGY	3 cut(s)	1987, 2026, 2266
XhoI	CTCGAG	1 cut(s)	1608
XmaI	CCCGGG	1 cut(s)	231
XmiI	GTMKAC	2 cut(s)	1854, 2505
XmnI	GAANNNNTTC	4 cut(s)	431, 517, 1199, 1797
XspI	CTAG	6 cut(s)	41, 677, 1325, 2321, 2384, 2400
ZrmI	AGTACT	1 cut(s)	2240
Zsp2I	ATGCAT	1 cut(s)	2374

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.