Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000461

Physical Location & Seq

Genomic Coordinates Forward (+)

31333760 .. 31334947

Gene Structure 1188 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ49178

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1188 bp

ATGGTGGTACGCTCCGGTTTTTGGCATAATCTCCTCCACATTTCTTTCATTTTCCTTTTGCTTCCACAATGTTGTTTCTGCGGTAGTGACCTTGACACACTATTGATACTCAAGAAAGCCATGATTGGACCCCAAGGTTCAGGGAAAGACGACTGGGAGCGCTCTTCCCACAACTACTGCTCCTTCTCTGGAGTTTCATGTGACCACCAGTCACGAGTGGTTGCTCTTAACGTTTCCAGTTTGCATCTGTTTGGCTCGGTTCCCGCGGAGATTGGACTTCTGAACAAGCTCGTCAACCTCACCCTTGCCGACAACAGCTTAGGAGGGAGCCTTCCCCGGGAGATCGCCAACCTGACTTCTTTAAGGCTCTTGAACATCTCCAACCACTTGTTTAGTGGAAGATTTCCCGGAGAAATGACAGAGCTTGAGGTTCTCGATGCCTATATTAACGACTTCACTGGTCAACTTCCGGTAGATCAGCTCGTTAATCTCAAAAAGCTCAAACATCTAGATCTTGGCGGTAACCAATTCACCGGAGAAATTCCCGGAAATTATTCAATGATTCAAAGCTTGGAGTATCTAGGCCTCAACGGTATCGGGCTCACCGGAAAGTTCCCTTCCAGTTTGGCTCAGTTGAAGAATCTCAAGGAATTGCACGTGGTCTATAACAAATTCGAAGGTGGACTTCCTGAGTTGGGAACGATGGAGTCGTTGCAAGTGCTTGACATGGTCAACTGTAACCTCAACGGCACGATTCCTATCAGTCTAGGCTTTTTGAAGAACTTACGCGCGTTGGATCTCTCAAATAACGAACTCTCCGGAGAAATACCGGAGAGTTTCTCAAAGCTCAAGAATCTTATCCTTCTCAACCTGTGTGAAAACAATCTCTACGGCCAGATAACTCCAGAACTTTCAGGTATGGTGAGTCTGACGGCTTTAGATCTGTCTTATAACAAATTCACCGGAGAAATACCGGAGAGTTTCTCAGAGCTCAAGAACCTTAGCCTTCTCACACTGTCTAGCAACAATCTCTACGGCCAGATACCCAACTTCATCGGTGATCTTCCTCATCTGGAGGCGCTTCTAGTTTCGGAGAACAACTTCACATTTGCTCTACCGGAGAGTCTTGGCCGGAATGGAAGGTTCAAAGACCTCGATGTAAGCGGAAACCACCTTTTACCGGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000325 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009506 GO:0009791 GO:0009888 GO:0009908 GO:0009909 GO:0009934 GO:0009987 GO:0010073 GO:0010075 GO:0010080 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022414 GO:0022603 GO:0030054 GO:0032501 GO:0032502 GO:0033612 GO:0036211 GO:0036289 GO:0040008 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046777 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048608 GO:0048638 GO:0048731 GO:0048831 GO:0048832 GO:0048833 GO:0048856 GO:0050789 GO:0050793 GO:0051239 GO:0055044 GO:0061458 GO:0065007 GO:0071704 GO:0071944 GO:0090567 GO:0140096 GO:1901564 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

395

Amino Acids

43.3

Weight (kDa)

5.21

Isoelectric Point (pI)

32.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	29 - 68	3.3e-06	Leucine rich repeat N-terminal domain
LRR_14	PF23598	85 - 171	4e-07	Leucine-rich repeat region
LRR_14	PF23598	143 - 282	1.1e-12	Leucine-rich repeat region
LRR_8	PF13855	261 - 320	1.1e-08	Leucine rich repeat
LRR_8	PF13855	305 - 344	3.1e-06	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000461)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75820
fragaria_vesca	FvH4_2g38230 FvH4_2g38230
malus_domestica	MD05G1138900.v1.1 MD05G1139100.v1.1 MD05G1139200.v1.1 MD08G1010700.v1.1 MD08G1241800.v1.1 MD15G1010800.v1.1
prunus_persica	Prupe.1G363300_v2.0.a1 Prupe.6G163000_v2.0.a1
pyrus_communis	pycom05g13420 pycom05g13430 pycom08g00930 pycom15g00920
rosa_chinensis	RchiOBHm_Chr2g0118991 RchiOBHm_Chr2g0119001 RchiOBHm_Chr2g0119031 RchiOBHm_Chr2g0119041 RchiOBHm_Chr2g0119051 RchiOBHm_Chr2g0119091 RchiOBHm_Chr2g0119101 RchiOBHm_Chr2g0119111 RchiOBHm_Chr2g0120661 RchiOBHm_Chr2g0173321 RchiOBHm_Chr3g0478281 RchiOBHm_Chr4g0421131 RchiOBHm_Chr6g0303151
rosa_laevigata	RLG00000011084 RLG00000011103 RLG00000018441 RLG00000018445 RLG00000018565 RLG00000018566 RLG00000018567 RLG00000018568 RLG00000018571
rosa_multiflora	Rmu_co8157004.1_g000001 Rmu_co8277963.1_g000001 Rmu_co8302039.1_g000001 Rmu_co8360703.1_g000001 Rmu_co8384839.1_g000001 Rmu_sc0000319.1_g000027 Rmu_sc0001653.1_g000012 Rmu_sc0001653.1_g000013 Rmu_sc0001653.1_g000021 Rmu_sc0001822.1_g000002 Rmu_sc0001822.1_g000008 Rmu_sc0001822.1_g000030 Rmu_sc0001844.1_g000003 Rmu_sc0008911.1_g000007 Rmu_sc0019499.1_g000001 Rmu_sc0025689.1_g000001
rosa_roxburghii	Rroxscaffold_2G00123240 Rroxscaffold_2G00123260 Rroxscaffold_2G00124530 Rroxscaffold_7G00164970 Rroxscaffold_7G00192210
rosa_rugosa	Rorug02G0220100 Rorug02G0220200 Rorug02G0230200 Rorug02G0230300 Rorug06G0319400
rosa_samantha	Rh2AG277100 Rh2AG277200 Rh2AG277700 Rh2AG277800 Rh2AG278100 Rh2AG278300 Rh2AG286600 Rh2BG289000 Rh2BG289200 Rh2BG298100 Rh2BG298200 Rh2CG275700 Rh2CG275900 Rh2CG623600 Rh2DG284200 Rh2DG303300 Rh2DG303400 Rh2DG303500 Rh2DG312000 Rh2DG312100 Rh6AG433400 Rh6BG469300 Rh6CG445900 Rh6DG432500
rosa_wichuraiana	Rw2G022080 Rw2G022990 Rw2G023000 Rw6G037580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	951
AccII	CGCG	3 cut(s)	266, 789, 791
AccIII	TCCGGA	1 cut(s)	818
AciI	CCGC	5 cut(s)	81, 264, 266, 519, 1164
AclI	AACGTT	1 cut(s)	231
AclWI	GGATC	1 cut(s)	804
AcoI	YGGCCR	3 cut(s)	892, 1036, 1129
AcsI	RAATTY	3 cut(s)	540, 671, 956
AcvI	CACGTG	1 cut(s)	658
AfaI	GTAC	1 cut(s)	9
AfeI	AGCGCT	1 cut(s)	161
AfiI	CCNNNNNNNGG	4 cut(s)	21, 337, 695, 1180
AgsI	TTSAA	6 cut(s)	373, 558, 566, 637, 778, 1147
AhdI	GACNNNNNGTC	1 cut(s)	208
AluBI	AGCT	8 cut(s)	289, 318, 424, 481, 499, 570, 847, 991
AluI	AGCT	8 cut(s)	289, 318, 424, 481, 499, 570, 847, 991
Alw21I	GWGCWC	1 cut(s)	993
AlwI	GGATC	1 cut(s)	804
Ama87I	CYCGRG	1 cut(s)	336
Aor13HI	TCCGGA	1 cut(s)	818
Aor51HI	AGCGCT	1 cut(s)	161
AoxI	GGCC	4 cut(s)	583, 892, 1036, 1129
ApoI	RAATTY	3 cut(s)	540, 671, 956
Asp700I	GAANNNNTTC	2 cut(s)	553, 1100
AspLEI	GCGC	3 cut(s)	162, 791, 1081
AspS9I	GGNCC	1 cut(s)	128
AsuC2I	CCSGG	4 cut(s)	337, 338, 408, 546
AsuHPI	GGTGA	6 cut(s)	292, 523, 595, 934, 952, 1070
AsuII	TTCGAA	1 cut(s)	675
AvaI	CYCGRG	1 cut(s)	336
AvaII	GGWCC	1 cut(s)	128
BanII	GRGCYC	2 cut(s)	603, 993
BauI	CACGAG	1 cut(s)	213
BbrPI	CACGTG	1 cut(s)	658
Bbv12I	GWGCWC	1 cut(s)	993
BccI	CCATC	1 cut(s)	697
BceAI	ACGGC	4 cut(s)	763, 907, 948, 1051
BcnI	CCSGG	4 cut(s)	337, 338, 408, 546
BfaI	CTAG	5 cut(s)	509, 581, 767, 1020, 1085
BfoI	RGCGCY	2 cut(s)	163, 1082
BglII	AGATCT	2 cut(s)	511, 940
Bme1390I	CCNGG	4 cut(s)	337, 338, 408, 546
Bme18I	GGWCC	1 cut(s)	128
BmeRI	GACNNNNNGTC	1 cut(s)	208
BmeT110I	CYCGRG	1 cut(s)	336
BmgT120I	GGNCC	1 cut(s)	128
BmiI	GGNNCC	3 cut(s)	130, 261, 329
BmrFI	CCNGG	4 cut(s)	337, 338, 408, 546
BmrI	ACTGGG	1 cut(s)	163
BmsI	GCATC	2 cut(s)	253, 427
BmuI	ACTGGG	1 cut(s)	163
BplI	GAGNNNNNCTC	4 cut(s)	824, 856, 968, 1000
BpmI	CTGGAG	3 cut(s)	210, 888, 1094
Bpu10I	CCTNAGC	2 cut(s)	319, 1001
Bpu14I	TTCGAA	1 cut(s)	675
BpuEI	CTTGAG	5 cut(s)	95, 446, 629, 833, 977
BpuMI	CCSGG	4 cut(s)	337, 338, 408, 546
BsaAI	YACGTR	1 cut(s)	658
BsaBI	GATNNNNATC	1 cut(s)	758
BsaJI	CCNNGG	4 cut(s)	133, 264, 335, 336
BsaWI	WCCGGW	9 cut(s)	14, 469, 533, 605, 818, 829, 962, 973, 1117
BsaXI	ACNNNNNCTCC	4 cut(s)	164, 194, 800, 830
Bsc4I	CCNNNNNNNGG	4 cut(s)	21, 337, 695, 1180
Bse118I	RCCGGY	1 cut(s)	1180
Bse1I	ACTGG	5 cut(s)	158, 208, 237, 463, 621
Bse8I	GATNNNNATC	1 cut(s)	758
BseAI	TCCGGA	1 cut(s)	818
BseDI	CCNNGG	4 cut(s)	133, 264, 335, 336
BseJI	GATNNNNATC	1 cut(s)	758
BseLI	CCNNNNNNNGG	4 cut(s)	21, 337, 695, 1180
BseMII	CTCAG	3 cut(s)	644, 681, 999
BseNI	ACTGG	5 cut(s)	158, 208, 237, 463, 621
BseRI	GAGGAG	1 cut(s)	23
Bsh1236I	CGCG	3 cut(s)	266, 789, 791
BshFI	GGCC	4 cut(s)	585, 894, 1038, 1131
BsiHKAI	GWGCWC	1 cut(s)	993
BsiHKCI	CYCGRG	1 cut(s)	336
BslI	CCNNNNNNNGG	4 cut(s)	21, 337, 695, 1180
BsnI	GGCC	4 cut(s)	585, 894, 1038, 1131
BsoBI	CYCGRG	1 cut(s)	336
Bsp119I	TTCGAA	1 cut(s)	675
Bsp1286I	GDGCHC	2 cut(s)	603, 993
Bsp13I	TCCGGA	1 cut(s)	818
Bsp143I	GATC	6 cut(s)	342, 475, 511, 796, 940, 1060
BspACI	CCGC	5 cut(s)	81, 264, 266, 519, 1164
BspANI	GGCC	4 cut(s)	585, 894, 1038, 1131
BspCNI	CTCAG	3 cut(s)	643, 682, 998
BspEI	TCCGGA	1 cut(s)	818
BspFNI	CGCG	3 cut(s)	266, 789, 791
BspLI	GGNNCC	3 cut(s)	130, 261, 329
BspPI	GGATC	1 cut(s)	804
BspQI	GCTCTTC	1 cut(s)	169
BspT104I	TTCGAA	1 cut(s)	675
BsrFI	RCCGGY	1 cut(s)	1180
BsrI	ACTGG	5 cut(s)	158, 208, 237, 463, 621
BssAI	RCCGGY	1 cut(s)	1180
BssECI	CCNNGG	4 cut(s)	133, 264, 335, 336
BssMI	GATC	6 cut(s)	342, 475, 511, 796, 940, 1060
BssSI	CACGAG	1 cut(s)	213
BssT1I	CCWWGG	1 cut(s)	133
Bst2BI	CACGAG	1 cut(s)	213
Bst4CI	ACNGT	3 cut(s)	593, 737, 1017
Bst6I	CTCTTC	1 cut(s)	169
BstBAI	YACGTR	1 cut(s)	658
BstBI	TTCGAA	1 cut(s)	675
BstDEI	CTNAG	5 cut(s)	319, 630, 690, 985, 1001
BstDSI	CCRYGG	1 cut(s)	264
BstEII	GGTNACC	1 cut(s)	521
BstFNI	CGCG	3 cut(s)	266, 789, 791
BstH2I	RGCGCY	2 cut(s)	163, 1082
BstHHI	GCGC	3 cut(s)	162, 791, 1081
BstKTI	GATC	6 cut(s)	345, 478, 514, 799, 943, 1063
BstMBI	GATC	6 cut(s)	342, 475, 511, 796, 940, 1060
BstPI	GGTNACC	1 cut(s)	521
BstSCI	CCNGG	4 cut(s)	335, 336, 406, 544
BstUI	CGCG	3 cut(s)	266, 789, 791
BstX2I	RGATCY	3 cut(s)	511, 796, 940
BstYI	RGATCY	3 cut(s)	511, 796, 940
BsuRI	GGCC	4 cut(s)	585, 894, 1038, 1131
BtgI	CCRYGG	1 cut(s)	264
BtsIMutI	CAGTG	2 cut(s)	456, 1013
CfoI	GCGC	3 cut(s)	162, 791, 1081
Cfr10I	RCCGGY	1 cut(s)	1180
Cfr13I	GGNCC	1 cut(s)	128
Cfr42I	CCGCGG	1 cut(s)	267
Cfr9I	CCCGGG	1 cut(s)	336
Csp6I	GTAC	1 cut(s)	8
CviAII	CATG	3 cut(s)	121, 198, 727
CviQI	GTAC	1 cut(s)	8
DdeI	CTNAG	5 cut(s)	319, 630, 690, 985, 1001
DpnI	GATC	6 cut(s)	344, 477, 513, 798, 942, 1062
DpnII	GATC	6 cut(s)	342, 475, 511, 796, 940, 1060
DriI	GACNNNNNGTC	1 cut(s)	208
EaeI	YGGCCR	3 cut(s)	892, 1036, 1129
Eam1104I	CTCTTC	1 cut(s)	169
Eam1105I	GACNNNNNGTC	1 cut(s)	208
EarI	CTCTTC	1 cut(s)	169
Ecl136II	GAGCTC	1 cut(s)	991
Eco130I	CCWWGG	1 cut(s)	133
Eco147I	AGGCCT	1 cut(s)	585
Eco24I	GRGCYC	2 cut(s)	603, 993
Eco47I	GGWCC	1 cut(s)	128
Eco47III	AGCGCT	1 cut(s)	161
Eco53kI	GAGCTC	1 cut(s)	991
Eco72I	CACGTG	1 cut(s)	658
Eco88I	CYCGRG	1 cut(s)	336
Eco91I	GGTNACC	1 cut(s)	521
EcoICRI	GAGCTC	1 cut(s)	991
EcoO65I	GGTNACC	1 cut(s)	521
EcoT14I	CCWWGG	1 cut(s)	133
EcoT38I	GRGCYC	2 cut(s)	603, 993
ErhI	CCWWGG	1 cut(s)	133
FaeI	CATG	3 cut(s)	124, 201, 730
FaiI	YATR	8 cut(s)	27, 122, 199, 444, 666, 728, 920, 951
FalI	AAGNNNNNCTT	2 cut(s)	669, 701
FatI	CATG	3 cut(s)	120, 197, 726
FauI	CCCGC	1 cut(s)	271
FriOI	GRGCYC	2 cut(s)	603, 993
FspBI	CTAG	5 cut(s)	509, 581, 767, 1020, 1085
GlaI	GCGC	3 cut(s)	161, 790, 1080
GsuI	CTGGAG	3 cut(s)	210, 888, 1094
HaeII	RGCGCY	2 cut(s)	163, 1082
HaeIII	GGCC	4 cut(s)	585, 894, 1038, 1131
HhaI	GCGC	3 cut(s)	162, 791, 1081
Hin1II	CATG	3 cut(s)	124, 201, 730
Hin6I	GCGC	3 cut(s)	160, 789, 1079
HinP1I	GCGC	3 cut(s)	160, 789, 1079
HincII	GTYRAC	3 cut(s)	295, 464, 733
HindII	GTYRAC	3 cut(s)	295, 464, 733
HindIII	AAGCTT	1 cut(s)	568
HinfI	GANTC	7 cut(s)	562, 640, 707, 754, 853, 925, 1123
HphI	GGTGA	6 cut(s)	292, 523, 595, 934, 952, 1070
Hpy166II	GTNNAC	4 cut(s)	295, 464, 683, 733
Hpy188I	TCNGA	4 cut(s)	282, 930, 988, 1093
Hpy8I	GTNNAC	4 cut(s)	295, 464, 683, 733
HpyAV	CCTTC	7 cut(s)	193, 341, 627, 671, 872, 1016, 1134
HpyCH4III	ACNGT	3 cut(s)	593, 737, 1017
HpyCH4IV	ACGT	2 cut(s)	231, 657
HpyCH4V	TGCA	3 cut(s)	244, 655, 715
HpyF3I	CTNAG	5 cut(s)	319, 630, 690, 985, 1001
HpySE526I	ACGT	2 cut(s)	231, 657
Hsp92II	CATG	3 cut(s)	124, 201, 730
HspAI	GCGC	3 cut(s)	160, 789, 1079
Kpn2I	TCCGGA	1 cut(s)	818
KspI	CCGCGG	1 cut(s)	267
Kzo9I	GATC	6 cut(s)	342, 475, 511, 796, 940, 1060
LguI	GCTCTTC	1 cut(s)	169
LmnI	GCTCC	4 cut(s)	17, 157, 185, 327
LweI	GCATC	2 cut(s)	253, 427
MaeI	CTAG	5 cut(s)	509, 581, 767, 1020, 1085
MaeII	ACGT	2 cut(s)	231, 657
MaeIII	GTNAC	5 cut(s)	86, 200, 210, 521, 737
MalI	GATC	6 cut(s)	344, 477, 513, 798, 942, 1062
MboI	GATC	6 cut(s)	342, 475, 511, 796, 940, 1060
MboII	GAAGA	5 cut(s)	156, 411, 649, 790, 1055
MflI	RGATCY	3 cut(s)	511, 796, 940
MhlI	GDGCHC	2 cut(s)	603, 993
MluCI	AATT	6 cut(s)	527, 540, 550, 650, 671, 956
MlyI	GAGTC	3 cut(s)	716, 934, 1132
MmeI	TCCRAC	2 cut(s)	405, 774
MnlI	CCTC	9 cut(s)	44, 308, 317, 421, 596, 752, 1069, 1077, 1163
MroI	TCCGGA	1 cut(s)	818
MroXI	GAANNNNTTC	2 cut(s)	553, 1100
MseI	TTAA	4 cut(s)	228, 362, 447, 486
MspA1I	CMGCKG	1 cut(s)	266
MspR9I	CCNGG	4 cut(s)	337, 338, 408, 546
MvnI	CGCG	3 cut(s)	266, 789, 791
NciI	CCSGG	4 cut(s)	337, 338, 408, 546
NdeII	GATC	6 cut(s)	342, 475, 511, 796, 940, 1060
NlaIII	CATG	3 cut(s)	124, 201, 730
NlaIV	GGNNCC	3 cut(s)	130, 261, 329
NmuCI	GTSAC	3 cut(s)	86, 200, 210
NspV	TTCGAA	1 cut(s)	675
PceI	AGGCCT	1 cut(s)	585
PciSI	GCTCTTC	1 cut(s)	169
PcsI	WCGNNNNNNNCGW	1 cut(s)	707
PdmI	GAANNNNTTC	2 cut(s)	553, 1100
PfeI	GAWTC	4 cut(s)	562, 640, 754, 853
PflFI	GACNNNGTC	1 cut(s)	728
PfoI	TCCNGGA	2 cut(s)	406, 544
PleI	GAGTC	3 cut(s)	715, 933, 1131
PmaCI	CACGTG	1 cut(s)	658
PmlI	CACGTG	1 cut(s)	658
PpsI	GAGTC	3 cut(s)	715, 933, 1131
Ppu21I	YACGTR	1 cut(s)	658
PsiI	TTATAA	1 cut(s)	951
Psp124BI	GAGCTC	1 cut(s)	993
Psp1406I	AACGTT	1 cut(s)	231
PspCI	CACGTG	1 cut(s)	658
PspEI	GGTNACC	1 cut(s)	521
PspN4I	GGNNCC	3 cut(s)	130, 261, 329
PspPI	GGNCC	1 cut(s)	128
PsuI	RGATCY	3 cut(s)	511, 796, 940
PsyI	GACNNNGTC	1 cut(s)	728
RsaI	GTAC	1 cut(s)	9
RsaNI	GTAC	1 cut(s)	8
SacI	GAGCTC	1 cut(s)	993
SacII	CCGCGG	1 cut(s)	267
SapI	GCTCTTC	1 cut(s)	169
SaqAI	TTAA	4 cut(s)	228, 362, 447, 486
Sau3AI	GATC	6 cut(s)	342, 475, 511, 796, 940, 1060
Sau96I	GGNCC	1 cut(s)	128
SchI	GAGTC	3 cut(s)	716, 934, 1132
ScrFI	CCNGG	4 cut(s)	337, 338, 408, 546
SduI	GDGCHC	2 cut(s)	603, 993
SfaNI	GCATC	2 cut(s)	253, 427
Sfr303I	CCGCGG	1 cut(s)	267
SfuI	TTCGAA	1 cut(s)	675
SgrBI	CCGCGG	1 cut(s)	267
SinI	GGWCC	1 cut(s)	128
SmaI	CCCGGG	1 cut(s)	338
SmlI	CTYRAG	5 cut(s)	110, 425, 644, 848, 992
SmoI	CTYRAG	5 cut(s)	110, 425, 644, 848, 992
Sse9I	AATT	6 cut(s)	527, 540, 550, 650, 671, 956
SseBI	AGGCCT	1 cut(s)	585
SsiI	CCGC	5 cut(s)	81, 264, 266, 519, 1164
SspMI	CTAG	5 cut(s)	509, 581, 767, 1020, 1085
SstI	GAGCTC	1 cut(s)	993
StuI	AGGCCT	1 cut(s)	585
StyD4I	CCNGG	4 cut(s)	335, 336, 406, 544
StyI	CCWWGG	1 cut(s)	133
TaaI	ACNGT	3 cut(s)	593, 737, 1017
TaiI	ACGT	2 cut(s)	234, 660
TaqI	TCGA	3 cut(s)	435, 675, 1155
TasI	AATT	6 cut(s)	527, 540, 550, 650, 671, 956
TfiI	GAWTC	4 cut(s)	562, 640, 754, 853
Tru1I	TTAA	4 cut(s)	228, 362, 447, 486
Tru9I	TTAA	4 cut(s)	228, 362, 447, 486
TscAI	CASTG	2 cut(s)	463, 1020
TseFI	GTSAC	3 cut(s)	86, 200, 210
Tsp45I	GTSAC	3 cut(s)	86, 200, 210
TspDTI	ATGAA	3 cut(s)	37, 186, 1042
TspMI	CCCGGG	1 cut(s)	336
TspRI	CASTG	2 cut(s)	463, 1020
Tth111I	GACNNNGTC	1 cut(s)	728
VpaK11BI	GGWCC	1 cut(s)	128
XapI	RAATTY	3 cut(s)	540, 671, 956
XbaI	TCTAGA	1 cut(s)	508
XcmI	CCANNNNNNNNNTGG	1 cut(s)	392
XmaI	CCCGGG	1 cut(s)	336
XmnI	GAANNNNTTC	2 cut(s)	553, 1100
XspI	CTAG	5 cut(s)	509, 581, 767, 1020, 1085

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.