Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0000461

Physical Location & Seq

Genomic Coordinates Forward (+)

34056559 .. 34062922

Gene Structure 6364 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG298100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2073 bp

ATGGTACTGGTAGGCTCCCCTTTTTGGCATAATCTCCTCCACATTTCTTTCATTTTCCTTTTCCTTCCACAATGTTGTTTCTGCGTTGGTGACCTTGACGCACTGTTGATGCTCAAGAAAGCCATGATTGGCCCCAAAGGTTCAGGGCTAGAGAACTGGGACCCCTCTTCTTATTACTACTGCTCCTTCTCTGGAGTTTCATGTGACCACCAATCACGAGTTGTTGCTCTCAACGTGTCCGGTTTGCCTCTGTTTGGCTCGCTTCCGGCGGAGATTGGGCTTCTGAACAAGCTCGTCAACCTCACCATTGCCAACAACAACTTAACAGGGAGTCTTCCCCGGGAGATGGCCAACCTGACTTGTTTAAAGCTCTTGAACATCTCCACGAACTTGTTCGTTGGAAGATTTCCCGGAGAAATCACGCTCAGAATGACAGAGCTTGAGGTTCTTGACGCCTGTGACAACAACTTCACTGGTCCACTTCCGGTAGAGCTCGTCAAACTCAAAAAGATCAAACATCTAAATCTTGGCGGGAACTACTTCGCCGGAGAAATTCCCGAAAGTTATTCAAAGATTCAAAGCTTAGAATATTTGGGCCTGCACGCTAACTCGCTTGGCGGAAAGTTTCCGCCCAGCTTGGCTCTGTTGCAGAATCTCAAGGAATTGTACGTTGGTTACGACAACACTTACAGCGGTGGAATTCCACCAGAGTTGGGAACGATGGAGTCGCTGCAAGTGCTTGACATGGCGAGCTGTAACCTCACCGGCACGATTCCTGTCAGTCTAGGCTTTTTGAAGAACTTACGCGCGTTGTTTCTACATATTAACCATTTGAGTGGTTATATACCTCCAAAACTTTCAGGTATGGTGAGTCTGATGTCTTTGGATCTCTCTATTAACGAACTCACCGGAGAAATACCAGAAAGTCTCTCGGAGCTCAAGAACCTTACCCTACTCAACCTGTTTAAGAACAATTTTTACGGCCCAATACCCAACTTCATCGGCGATCTTCCTCATCTGGAGGTGCTTCATCTTTGGCAGAACAACTTTACATTTGAACTACCTGAGAGTCTTGGCCGGAATGGAAGGCTCGAAGACCTCGATGTAGCCGGTAACCACCTCACCGGGTTGATTCCTCGAGATTTGTGCAAAGGAGGGAGGTTGAGGGCGTTGATTCTGATGAATAATCACTTCTTTGGGCCGATTCCGGAGGCATTGGGTCGGTGCAAGTCGCTCGGGCATATCCTATTGAAGAAAAACACACTCAACGGGACTATTCCTGCCGGAATCTTTAATAACTTACCTGATTTGATCAGGATTGAGCTGAATGATAACTACTTGTCTGGAAAACTTCCATTGCAGATGTCGGGTGCCTCACCCGAAATTCTCACACTTTCCCGGAATCAGATTTCTGGAAAAATCCCATCCACCATTGGAACCCTCAAGAATTTAAAACATCTTTCGCTAGATGGGAACAGATTCTCCGGGCAAGTACCAACAGAGATCTTCAGTTTACAATTGCTAAGTAAACTCAACATGAGCACCAACAATATTGGTGGTGAAATTCCGGCTTCAATCTCTGGTTGTTCCTCTCTGACGTTCCTAGATTTTAGTCAAAACACTTTTGTTGGGGAAATCCCAAGAGGGATAAGTAAGCTGAAAGTAATTCAGTTTCTTAATTTTTCAAGGAACAAGCTAACAGGTCCAATACCTGTGGAATTCATATACATGGGTAGCCTCACAAATTTGGATCTCTCCTATAACAATTTCATTGGTAGGATCCCAGCCGGAGGTCAGTTTTTATGGTCGAATGCTTGGTTTGAAGGAAATCCCAATCTGTGTTCGGCGGAAAAGGTGTTGTGCAGCTCTGATAACCACCCACGAGCTCGAGACCATAAACATCTGGAACTAGAGAGCAAAGTGGGAGATGGGAATCGACATCCTCGATCCAATTCGAAGAAGGGAACACGTCCTTGTACTCTCCATAAAATGGAGGAATCTACCAATTCCGCTTTGACACTGAGTTCTGCATCCCTGTCTTCAGCGCAGAGTCTGGTACTCCACCTTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000325 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009506 GO:0009791 GO:0009888 GO:0009908 GO:0009909 GO:0009934 GO:0009987 GO:0010073 GO:0010075 GO:0010080 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022414 GO:0022603 GO:0030054 GO:0032501 GO:0032502 GO:0033612 GO:0036211 GO:0036289 GO:0040008 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046777 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048608 GO:0048638 GO:0048731 GO:0048831 GO:0048832 GO:0048833 GO:0048856 GO:0050789 GO:0050793 GO:0051239 GO:0055044 GO:0061458 GO:0065007 GO:0071704 GO:0071944 GO:0090567 GO:0140096 GO:1901564 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

690

Amino Acids

75.57

Weight (kDa)

7.58

Isoelectric Point (pI)

37.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	31 - 69	1.7e-08	Leucine rich repeat N-terminal domain
LRR_14	PF23598	164 - 277	2.6e-10	Leucine-rich repeat region
LRR_8	PF13855	338 - 398	3.8e-06	Leucine rich repeat
LRR_14	PF23598	475 - 564	3e-09	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000461)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75820
fragaria_vesca	FvH4_2g38230 FvH4_2g38230
malus_domestica	MD05G1138900.v1.1 MD05G1139100.v1.1 MD05G1139200.v1.1 MD08G1010700.v1.1 MD08G1241800.v1.1 MD15G1010800.v1.1
prunus_persica	Prupe.1G363300_v2.0.a1 Prupe.6G163000_v2.0.a1
pyrus_communis	pycom05g13420 pycom05g13430 pycom08g00930 pycom15g00920
rosa_chinensis	RchiOBHm_Chr2g0118991 RchiOBHm_Chr2g0119001 RchiOBHm_Chr2g0119031 RchiOBHm_Chr2g0119041 RchiOBHm_Chr2g0119051 RchiOBHm_Chr2g0119091 RchiOBHm_Chr2g0119101 RchiOBHm_Chr2g0119111 RchiOBHm_Chr2g0120661 RchiOBHm_Chr2g0173321 RchiOBHm_Chr3g0478281 RchiOBHm_Chr4g0421131 RchiOBHm_Chr6g0303151
rosa_laevigata	RLG00000011084 RLG00000011103 RLG00000018441 RLG00000018445 RLG00000018565 RLG00000018566 RLG00000018567 RLG00000018568 RLG00000018571
rosa_multiflora	Rmu_co8157004.1_g000001 Rmu_co8277963.1_g000001 Rmu_co8302039.1_g000001 Rmu_co8360703.1_g000001 Rmu_co8384839.1_g000001 Rmu_sc0000319.1_g000027 Rmu_sc0001653.1_g000012 Rmu_sc0001653.1_g000013 Rmu_sc0001653.1_g000021 Rmu_sc0001822.1_g000002 Rmu_sc0001822.1_g000008 Rmu_sc0001822.1_g000030 Rmu_sc0001844.1_g000003 Rmu_sc0008911.1_g000007 Rmu_sc0019499.1_g000001 Rmu_sc0025689.1_g000001
rosa_roxburghii	Rroxscaffold_2G00123240 Rroxscaffold_2G00123260 Rroxscaffold_2G00124530 Rroxscaffold_7G00164970 Rroxscaffold_7G00192210
rosa_rugosa	Rorug02G0220100 Rorug02G0220200 Rorug02G0230200 Rorug02G0230300 Rorug06G0319400
rosa_samantha	Rh2AG277100 Rh2AG277200 Rh2AG277700 Rh2AG277800 Rh2AG278100 Rh2AG278300 Rh2AG286600 Rh2BG289000 Rh2BG289200 Rh2BG298100 Rh2BG298200 Rh2CG275700 Rh2CG275900 Rh2CG623600 Rh2DG284200 Rh2DG303300 Rh2DG303400 Rh2DG303500 Rh2DG312000 Rh2DG312100 Rh6AG433400 Rh6BG469300 Rh6CG445900 Rh6DG432500
rosa_wichuraiana	Rw2G022080 Rw2G022990 Rw2G023000 Rw6G037580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1370
AccB7I	CCANNNNNTGG	1 cut(s)	1990
AccII	CGCG	2 cut(s)	807, 809
AccIII	TCCGGA	1 cut(s)	1207
AciI	CCGC	7 cut(s)	269, 531, 618, 629, 693, 1847, 2010
AclWI	GGATC	5 cut(s)	894, 1758, 1774, 1787, 1941
AcoI	YGGCCR	2 cut(s)	348, 1075
AcsI	RAATTY	7 cut(s)	552, 699, 1383, 1447, 1563, 1718, 1744
AcuI	CTGAAG	2 cut(s)	1492, 2025
AcyI	GRCGYC	1 cut(s)	453
AfaI	GTAC	5 cut(s)	6, 668, 1494, 1978, 2058
AfiI	CCNNNNNNNGG	6 cut(s)	24, 254, 346, 713, 1790, 1990
AflIII	ACRYGT	2 cut(s)	234, 1967
AgsI	TTSAA	9 cut(s)	376, 570, 578, 796, 1058, 1252, 1575, 1686, 1823
AjiI	CACGTC	1 cut(s)	1970
AjuI	GAANNNNNNNTTGG	2 cut(s)	654, 686
AloI	GAACNNNNNNTCC	2 cut(s)	1466, 1498
Alw21I	GWGCWC	4 cut(s)	495, 939, 1544, 1888
Alw26I	GTCTC	2 cut(s)	932, 1884
AlwI	GGATC	5 cut(s)	894, 1758, 1774, 1787, 1941
AlwNI	CAGNNNCTG	1 cut(s)	2053
Ama87I	CYCGRG	4 cut(s)	339, 1137, 1235, 1887
Aor13HI	TCCGGA	1 cut(s)	1207
AoxI	GGCC	6 cut(s)	130, 348, 595, 982, 1075, 1199
ApeKI	GCWGC	2 cut(s)	730, 1863
ApoI	RAATTY	7 cut(s)	552, 699, 1383, 1447, 1563, 1718, 1744
Asp700I	GAANNNNTTC	3 cut(s)	392, 539, 1478
AspLEI	GCGC	2 cut(s)	809, 2047
AspS9I	GGNCC	7 cut(s)	131, 160, 476, 595, 983, 1199, 1703
AsuC2I	CCSGG	6 cut(s)	340, 341, 411, 1126, 1399, 1486
AsuHPI	GGTGA	8 cut(s)	101, 295, 754, 880, 898, 1114, 1368, 1571
AsuII	TTCGAA	1 cut(s)	1955
AvaI	CYCGRG	4 cut(s)	339, 1137, 1235, 1887
AvaII	GGWCC	3 cut(s)	160, 476, 1703
BalI	TGGCCA	1 cut(s)	350
BamHI	GGATCC	1 cut(s)	1779
BanI	GGYRCC	1 cut(s)	1370
BanII	GRGCYC	3 cut(s)	495, 939, 1888
BauI	CACGAG	2 cut(s)	216, 1881
BbsI	GAAGAC	3 cut(s)	326, 1101, 2031
Bbv12I	GWGCWC	4 cut(s)	495, 939, 1544, 1888
BbvI	GCAGC	2 cut(s)	717, 1875
BccI	CCATC	5 cut(s)	340, 715, 1432, 1463, 1922
BceAI	ACGGC	1 cut(s)	997
BcgI	CGANNNNNNTGC	4 cut(s)	1128, 1162, 1216, 1250
BclI	TGATCA	1 cut(s)	1311
BcnI	CCSGG	6 cut(s)	340, 341, 411, 1126, 1399, 1486
BcoDI	GTCTC	2 cut(s)	932, 1884
BfaI	CTAG	5 cut(s)	149, 785, 1466, 1604, 1910
BglII	AGATCT	1 cut(s)	1503
BisI	GCNGC	2 cut(s)	731, 1864
BlsI	GCNGC	2 cut(s)	732, 1865
Bme1390I	CCNGG	6 cut(s)	340, 341, 411, 1126, 1399, 1486
Bme18I	GGWCC	3 cut(s)	160, 476, 1703
BmeT110I	CYCGRG	4 cut(s)	339, 1137, 1235, 1887
BmgBI	CACGTC	1 cut(s)	1970
BmgT120I	GGNCC	7 cut(s)	131, 160, 476, 595, 983, 1199, 1703
BmiI	GGNNCC	7 cut(s)	16, 133, 161, 162, 1372, 1438, 1781
BmrFI	CCNGG	6 cut(s)	340, 341, 411, 1126, 1399, 1486
BmrI	ACTGGG	1 cut(s)	166
BmsI	GCATC	2 cut(s)	99, 2039
BmuI	ACTGGG	1 cut(s)	166
BpiI	GAAGAC	3 cut(s)	326, 1101, 2031
BpmI	CTGGAG	2 cut(s)	213, 1040
Bpu14I	TTCGAA	1 cut(s)	1955
BpuEI	CTTGAG	5 cut(s)	98, 461, 641, 923, 1427
BpuMI	CCSGG	6 cut(s)	340, 341, 411, 1126, 1399, 1486
BsaBI	GATNNNNATC	1 cut(s)	1932
BsaHI	GRCGYC	1 cut(s)	453
BsaI	GGTCTC	1 cut(s)	1884
BsaJI	CCNNGG	2 cut(s)	338, 339
BsaWI	WCCGGW	4 cut(s)	239, 484, 908, 1207
BsaXI	ACNNNNNCTCC	4 cut(s)	167, 197, 1466, 1496
Bsc4I	CCNNNNNNNGG	6 cut(s)	24, 254, 346, 713, 1790, 1990
Bse118I	RCCGGY	2 cut(s)	764, 1109
Bse1I	ACTGG	3 cut(s)	12, 161, 478
Bse3DI	GCAATG	2 cut(s)	306, 1355
Bse8I	GATNNNNATC	1 cut(s)	1932
BseAI	TCCGGA	1 cut(s)	1207
BseDI	CCNNGG	2 cut(s)	338, 339
BseGI	GGATG	3 cut(s)	1424, 1939, 2030
BseJI	GATNNNNATC	1 cut(s)	1932
BseLI	CCNNNNNNNGG	6 cut(s)	24, 254, 346, 713, 1790, 1990
BseMI	GCAATG	2 cut(s)	306, 1355
BseMII	CTCAG	3 cut(s)	439, 1056, 2012
BseNI	ACTGG	3 cut(s)	12, 161, 478
BseRI	GAGGAG	1 cut(s)	26
BseXI	GCAGC	2 cut(s)	717, 1875
BseYI	CCCAGC	2 cut(s)	632, 1783
BsgI	GTGCAG	2 cut(s)	584, 1882
Bsh1236I	CGCG	2 cut(s)	807, 809
BshFI	GGCC	6 cut(s)	132, 350, 597, 984, 1077, 1201
BshNI	GGYRCC	1 cut(s)	1370
BsiHKAI	GWGCWC	4 cut(s)	495, 939, 1544, 1888
BsiHKCI	CYCGRG	4 cut(s)	339, 1137, 1235, 1887
BslFI	GGGAC	2 cut(s)	173, 1285
BslI	CCNNNNNNNGG	6 cut(s)	24, 254, 346, 713, 1790, 1990
BsmAI	GTCTC	2 cut(s)	932, 1884
BsmFI	GGGAC	2 cut(s)	173, 1285
BsmI	GAATGC	1 cut(s)	1816
BsnI	GGCC	6 cut(s)	132, 350, 597, 984, 1077, 1201
Bso31I	GGTCTC	1 cut(s)	1884
BsoBI	CYCGRG	4 cut(s)	339, 1137, 1235, 1887
Bsp119I	TTCGAA	1 cut(s)	1955
Bsp1286I	GDGCHC	4 cut(s)	495, 939, 1544, 1888
Bsp13I	TCCGGA	1 cut(s)	1207
Bsp143I	GATC	8 cut(s)	510, 886, 1006, 1311, 1503, 1750, 1779, 1946
BspACI	CCGC	7 cut(s)	269, 531, 618, 629, 693, 1847, 2010
BspANI	GGCC	6 cut(s)	132, 350, 597, 984, 1077, 1201
BspCNI	CTCAG	3 cut(s)	438, 1057, 2013
BspEI	TCCGGA	1 cut(s)	1207
BspFNI	CGCG	2 cut(s)	807, 809
BspLI	GGNNCC	7 cut(s)	16, 133, 161, 162, 1372, 1438, 1781
BspPI	GGATC	5 cut(s)	894, 1758, 1774, 1787, 1941
BspT104I	TTCGAA	1 cut(s)	1955
BspT107I	GGYRCC	1 cut(s)	1370
BspTNI	GGTCTC	1 cut(s)	1884
BsrDI	GCAATG	2 cut(s)	306, 1355
BsrFI	RCCGGY	2 cut(s)	764, 1109
BsrI	ACTGG	3 cut(s)	12, 161, 478
BssAI	RCCGGY	2 cut(s)	764, 1109
BssECI	CCNNGG	2 cut(s)	338, 339
BssMI	GATC	8 cut(s)	510, 886, 1006, 1311, 1503, 1750, 1779, 1946
BssNI	GRCGYC	1 cut(s)	453
BssSI	CACGAG	2 cut(s)	216, 1881
Bst2BI	CACGAG	2 cut(s)	216, 1881
Bst4CI	ACNGT	1 cut(s)	105
Bst6I	CTCTTC	1 cut(s)	172
BstACI	GRCGYC	1 cut(s)	453
BstBI	TTCGAA	1 cut(s)	1955
BstC8I	GCNNGC	4 cut(s)	260, 599, 603, 751
BstDEI	CTNAG	5 cut(s)	425, 583, 1065, 1523, 2021
BstEII	GGTNACC	2 cut(s)	89, 1112
BstF5I	GGATG	3 cut(s)	1424, 1939, 2030
BstFNI	CGCG	2 cut(s)	807, 809
BstHHI	GCGC	2 cut(s)	809, 2047
BstKTI	GATC	8 cut(s)	513, 889, 1009, 1314, 1506, 1753, 1782, 1949
BstMAI	GTCTC	2 cut(s)	932, 1884
BstMBI	GATC	8 cut(s)	510, 886, 1006, 1311, 1503, 1750, 1779, 1946
BstMWI	GCNNNNNNNGC	1 cut(s)	736
BstPI	GGTNACC	2 cut(s)	89, 1112
BstSCI	CCNGG	6 cut(s)	338, 339, 409, 1124, 1397, 1484
BstUI	CGCG	2 cut(s)	807, 809
BstV1I	GCAGC	2 cut(s)	717, 1875
BstV2I	GAAGAC	3 cut(s)	326, 1101, 2031
BstX2I	RGATCY	4 cut(s)	886, 1503, 1750, 1779
BstXI	CCANNNNNNTGG	1 cut(s)	836
BstYI	RGATCY	4 cut(s)	886, 1503, 1750, 1779
BsuRI	GGCC	6 cut(s)	132, 350, 597, 984, 1077, 1201
BtrI	CACGTC	1 cut(s)	1970
BtsCI	GGATG	3 cut(s)	1424, 1939, 2030
BtsIMutI	CAGTG	3 cut(s)	101, 471, 2018
Cac8I	GCNNGC	4 cut(s)	260, 599, 603, 751
CaiI	CAGNNNCTG	1 cut(s)	2053
CfoI	GCGC	2 cut(s)	809, 2047
Cfr10I	RCCGGY	2 cut(s)	764, 1109
Cfr13I	GGNCC	7 cut(s)	131, 160, 476, 595, 983, 1199, 1703
Cfr9I	CCCGGG	1 cut(s)	339
CseI	GACGC	2 cut(s)	107, 461
Csp6I	GTAC	5 cut(s)	5, 667, 1493, 1977, 2057
CspCI	CAANNNNNGTGG	7 cut(s)	693, 728, 1537, 1572, 1695, 1730, 2051
CviAII	CATG	5 cut(s)	124, 201, 745, 1537, 1729
CviQI	GTAC	5 cut(s)	5, 667, 1493, 1977, 2057
DdeI	CTNAG	5 cut(s)	425, 583, 1065, 1523, 2021
DpnI	GATC	8 cut(s)	512, 888, 1008, 1313, 1505, 1752, 1781, 1948
DpnII	GATC	8 cut(s)	510, 886, 1006, 1311, 1503, 1750, 1779, 1946
DraI	TTTAAA	2 cut(s)	366, 1452
EaeI	YGGCCR	2 cut(s)	348, 1075
Eam1104I	CTCTTC	1 cut(s)	172
EarI	CTCTTC	1 cut(s)	172
EciI	GGCGGA	4 cut(s)	284, 618, 633, 1862
Ecl136II	GAGCTC	3 cut(s)	493, 937, 1886
Eco24I	GRGCYC	3 cut(s)	495, 939, 1888
Eco31I	GGTCTC	1 cut(s)	1884
Eco47I	GGWCC	3 cut(s)	160, 476, 1703
Eco53kI	GAGCTC	3 cut(s)	493, 937, 1886
Eco57I	CTGAAG	2 cut(s)	1492, 2025
Eco88I	CYCGRG	4 cut(s)	339, 1137, 1235, 1887
Eco91I	GGTNACC	2 cut(s)	89, 1112
EcoICRI	GAGCTC	3 cut(s)	493, 937, 1886
EcoO109I	RGGNCCY	1 cut(s)	160
EcoO65I	GGTNACC	2 cut(s)	89, 1112
EcoRI	GAATTC	2 cut(s)	699, 1718
EcoT38I	GRGCYC	3 cut(s)	495, 939, 1888
FaeI	CATG	5 cut(s)	127, 204, 748, 1540, 1732
FaqI	GGGAC	2 cut(s)	173, 1285
FatI	CATG	5 cut(s)	123, 200, 744, 1536, 1728
FauI	CCCGC	1 cut(s)	524
FbaI	TGATCA	1 cut(s)	1311
Fnu4HI	GCNGC	2 cut(s)	731, 1864
FokI	GGATG	3 cut(s)	1411, 1926, 2017
FriOI	GRGCYC	3 cut(s)	495, 939, 1888
Fsp4HI	GCNGC	2 cut(s)	731, 1864
FspBI	CTAG	5 cut(s)	149, 785, 1466, 1604, 1910
GlaI	GCGC	2 cut(s)	808, 2046
GluI	GCNGC	2 cut(s)	731, 1864
GsaI	CCCAGC	2 cut(s)	636, 1787
GsuI	CTGGAG	2 cut(s)	213, 1040
HaeIII	GGCC	6 cut(s)	132, 350, 597, 984, 1077, 1201
HgaI	GACGC	2 cut(s)	107, 461
HhaI	GCGC	2 cut(s)	809, 2047
Hin1I	GRCGYC	1 cut(s)	453
Hin1II	CATG	5 cut(s)	127, 204, 748, 1540, 1732
Hin6I	GCGC	2 cut(s)	807, 2045
HinP1I	GCGC	2 cut(s)	807, 2045
HincII	GTYRAC	1 cut(s)	298
HindII	GTYRAC	1 cut(s)	298
HindIII	AAGCTT	1 cut(s)	580
HphI	GGTGA	8 cut(s)	101, 295, 754, 880, 898, 1114, 1368, 1571
Hpy166II	GTNNAC	4 cut(s)	298, 479, 1514, 1529
Hpy188I	TCNGA	8 cut(s)	285, 428, 876, 934, 1179, 1407, 1596, 1870
Hpy8I	GTNNAC	4 cut(s)	298, 479, 1514, 1529
HpyAV	CCTTC	5 cut(s)	74, 196, 1080, 1817, 1954
HpyCH4III	ACNGT	1 cut(s)	105
HpyCH4IV	ACGT	4 cut(s)	234, 669, 1598, 1969
HpyCH4V	TGCA	8 cut(s)	601, 649, 733, 1149, 1227, 1360, 1863, 2030
HpyF10VI	GCNNNNNNNGC	1 cut(s)	736
HpyF3I	CTNAG	5 cut(s)	425, 583, 1065, 1523, 2021
HpySE526I	ACGT	4 cut(s)	234, 669, 1598, 1969
Hsp92I	GRCGYC	1 cut(s)	453
Hsp92II	CATG	5 cut(s)	127, 204, 748, 1540, 1732
HspAI	GCGC	2 cut(s)	807, 2045
KflI	GGGWCCC	1 cut(s)	160
Kpn2I	TCCGGA	1 cut(s)	1207
Ksp22I	TGATCA	1 cut(s)	1311
Kzo9I	GATC	8 cut(s)	510, 886, 1006, 1311, 1503, 1750, 1779, 1946
LmnI	GCTCC	3 cut(s)	20, 188, 934
Lsp1109I	GCAGC	2 cut(s)	717, 1875
LweI	GCATC	2 cut(s)	99, 2039
MaeI	CTAG	5 cut(s)	149, 785, 1466, 1604, 1910
MaeII	ACGT	4 cut(s)	234, 669, 1598, 1969
MaeIII	GTNAC	6 cut(s)	89, 203, 458, 674, 755, 1112
MalI	GATC	8 cut(s)	512, 888, 1008, 1313, 1505, 1752, 1781, 1948
MboI	GATC	8 cut(s)	510, 886, 1006, 1311, 1503, 1750, 1779, 1946
MfeI	CAATTG	1 cut(s)	1517
MflI	RGATCY	4 cut(s)	886, 1503, 1750, 1779
MhlI	GDGCHC	4 cut(s)	495, 939, 1544, 1888
MlsI	TGGCCA	1 cut(s)	350
MluNI	TGGCCA	1 cut(s)	350
MlyI	GAGTC	5 cut(s)	340, 734, 880, 1078, 2059
MmeI	TCCRAC	1 cut(s)	379
Mox20I	TGGCCA	1 cut(s)	350
MroI	TCCGGA	1 cut(s)	1207
MroXI	GAANNNNTTC	3 cut(s)	392, 539, 1478
MscI	TGGCCA	1 cut(s)	350
MseI	TTAA	8 cut(s)	323, 365, 825, 897, 966, 1293, 1451, 1677
MslI	CAYNNNNRTG	2 cut(s)	834, 1727
Msp20I	TGGCCA	1 cut(s)	350
MspA1I	CMGCKG	1 cut(s)	693
MspR9I	CCNGG	6 cut(s)	340, 341, 411, 1126, 1399, 1486
MunI	CAATTG	1 cut(s)	1517
Mva1269I	GAATGC	1 cut(s)	1816
MvnI	CGCG	2 cut(s)	807, 809
MwoI	GCNNNNNNNGC	1 cut(s)	736
NciI	CCSGG	6 cut(s)	340, 341, 411, 1126, 1399, 1486
NdeII	GATC	8 cut(s)	510, 886, 1006, 1311, 1503, 1750, 1779, 1946
NlaIII	CATG	5 cut(s)	127, 204, 748, 1540, 1732
NlaIV	GGNNCC	7 cut(s)	16, 133, 161, 162, 1372, 1438, 1781
NmuCI	GTSAC	3 cut(s)	89, 203, 458
NspV	TTCGAA	1 cut(s)	1955
PaeR7I	CTCGAG	2 cut(s)	1137, 1887
PcsI	WCGNNNNNNNCGW	3 cut(s)	675, 1098, 1942
PctI	GAATGC	1 cut(s)	1816
PdmI	GAANNNNTTC	3 cut(s)	392, 539, 1478
PflMI	CCANNNNNTGG	1 cut(s)	1990
PfoI	TCCNGGA	2 cut(s)	409, 1397
PkrI	GCNGC	2 cut(s)	732, 1865
PleI	GAGTC	5 cut(s)	339, 733, 879, 1077, 2058
PpsI	GAGTC	5 cut(s)	339, 733, 879, 1077, 2058
PpuMI	RGGWCCY	1 cut(s)	160
Psp124BI	GAGCTC	3 cut(s)	495, 939, 1888
Psp5II	RGGWCCY	1 cut(s)	160
PspEI	GGTNACC	2 cut(s)	89, 1112
PspFI	CCCAGC	2 cut(s)	632, 1783
PspN4I	GGNNCC	7 cut(s)	16, 133, 161, 162, 1372, 1438, 1781
PspPI	GGNCC	7 cut(s)	131, 160, 476, 595, 983, 1199, 1703
PspPPI	RGGWCCY	1 cut(s)	160
PsrI	GAACNNNNNNTAC	2 cut(s)	962, 994
PstNI	CAGNNNCTG	1 cut(s)	2053
PsuI	RGATCY	4 cut(s)	886, 1503, 1750, 1779
RsaI	GTAC	5 cut(s)	6, 668, 1494, 1978, 2058
RsaNI	GTAC	5 cut(s)	5, 667, 1493, 1977, 2057
RseI	CAYNNNNRTG	2 cut(s)	834, 1727
SacI	GAGCTC	3 cut(s)	495, 939, 1888
SaqAI	TTAA	8 cut(s)	323, 365, 825, 897, 966, 1293, 1451, 1677
SatI	GCNGC	2 cut(s)	731, 1864
Sau3AI	GATC	8 cut(s)	510, 886, 1006, 1311, 1503, 1750, 1779, 1946
Sau96I	GGNCC	7 cut(s)	131, 160, 476, 595, 983, 1199, 1703
SchI	GAGTC	5 cut(s)	340, 734, 880, 1078, 2059
ScrFI	CCNGG	6 cut(s)	340, 341, 411, 1126, 1399, 1486
SduI	GDGCHC	4 cut(s)	495, 939, 1544, 1888
SfaNI	GCATC	2 cut(s)	99, 2039
Sfr274I	CTCGAG	2 cut(s)	1137, 1887
SfuI	TTCGAA	1 cut(s)	1955
SinI	GGWCC	3 cut(s)	160, 476, 1703
SlaI	CTCGAG	2 cut(s)	1137, 1887
SmaI	CCCGGG	1 cut(s)	341
SmiMI	CAYNNNNRTG	2 cut(s)	834, 1727
SmlI	CTYRAG	7 cut(s)	113, 440, 656, 938, 1137, 1442, 1887
SmoI	CTYRAG	7 cut(s)	113, 440, 656, 938, 1137, 1442, 1887
SsiI	CCGC	7 cut(s)	269, 531, 618, 629, 693, 1847, 2010
SspI	AATATT	2 cut(s)	590, 1552
SspMI	CTAG	5 cut(s)	149, 785, 1466, 1604, 1910
SstI	GAGCTC	3 cut(s)	495, 939, 1888
StyD4I	CCNGG	6 cut(s)	338, 339, 409, 1124, 1397, 1484
TaaI	ACNGT	1 cut(s)	105
TaiI	ACGT	4 cut(s)	237, 672, 1601, 1972
TaqI	TCGA	8 cut(s)	1092, 1101, 1138, 1808, 1888, 1936, 1945, 1955
TatI	WGTACW	1 cut(s)	1976
Tru1I	TTAA	8 cut(s)	323, 365, 825, 897, 966, 1293, 1451, 1677
Tru9I	TTAA	8 cut(s)	323, 365, 825, 897, 966, 1293, 1451, 1677
TscAI	CASTG	3 cut(s)	108, 478, 2025
TseFI	GTSAC	3 cut(s)	89, 203, 458
TseI	GCWGC	2 cut(s)	730, 1863
Tsp45I	GTSAC	3 cut(s)	89, 203, 458
TspDTI	ATGAA	7 cut(s)	40, 189, 988, 1019, 1196, 1711, 1759
TspMI	CCCGGG	1 cut(s)	339
TspRI	CASTG	3 cut(s)	108, 478, 2025
Van91I	CCANNNNNTGG	1 cut(s)	1990
VpaK11BI	GGWCC	3 cut(s)	160, 476, 1703
XapI	RAATTY	7 cut(s)	552, 699, 1383, 1447, 1563, 1718, 1744
XhoI	CTCGAG	2 cut(s)	1137, 1887
XmaI	CCCGGG	1 cut(s)	339
XmnI	GAANNNNTTC	3 cut(s)	392, 539, 1478
XspI	CTAG	5 cut(s)	149, 785, 1466, 1604, 1910

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.