Prupe.7G177500_v2.0.a1

Belongs to the 'GDSL' lipolytic enzyme family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
17552037 .. 17553625
1589 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G177500.1

Sequence Viewer

Length: 999 bp
ATGGCAAAGCAGATTTGTGCATTCTTCTTCTGCTTCTGGTGGTTTCTGTTTTGTCTGGGGCACATAGCCAATGCAGATGATCCAGTAACTATTTTCATCTTTGGAGACTCAACTGCTGATGTTGCGAGACTATTTGGCTACCAGAGAAGTCCGCCACCCTTCTTGTATATTCTCAACCGTACCTCCACTTTTAAAAGAGATATTCTGCAGGGGGTGAACTTTGCTTCAGGAGGATCCGGCATACTCAAAGATACCGGAAAATTCAGATATATCGAGGTTGTTCCACTCGGAGACCAAATCCAACAATTTGCGACAGTCCGGGGAAATTTCACAAAGTTGATGGGTCCCGAGGCGACTGATAAATTTCTTGCCAAGTCTTTGTTCATCATTAGTATCGGAAGCAACGACCTGTTCGACCATGTGGAACTTCCTTCCAATTCCTCTACCTCAGTTGATCCAGAGGATGAGTTCTTCTACATGGCAAATCTTCAATTCACGTACCGTAACCATTTAGAGGGTTTGTACAAGTTGGGAGCTCGGAAATTTGGGATTATAAGTGTTGCTCCAATTGGATGTTGCCCTCATGCACGTGTTTCAAATACGTCGGGTGTTTGCAGGGAGGAACTAAACAGGCTTGCTCAATCTTTTTTCATTTCACTGAAGGATCTTCTGCTCGAAATGAGCTCAAAGTTGAAAGGGATGAAATACTCACTCGGAAACGCTTATGAGATGACAATGAGCATCATTGAAGACCCATTAGCCTTTGGTTTTAAGGACATCCAATCAGCTTGTTGTGGAAATGGACAGTTAAATGGAGTAATCCCATGCATGCATTCCTTAAACCCCAACCTTTGTGCGAATCGGCATGAGTATTTGTTCTGGGACTTGTATCATCCAACTGAATATGCTTCCCGACTAGCAGCACTTACCCTCTATGGCGCAGGGACAAGATTTGTGGCACCCATGAATTTCAGTCAGTTGGCGGCTATTCCTGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

333

Amino Acids

37.07

Weight (kDa)

6.65

Isoelectric Point (pI)

38.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000448)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10790 FvH4_1g10790 FvH4_1g10790 FvH4_1g10791 FvH4_1g10800 FvH4_2g15970 FvH4_2g15980 FvH4_2g15990
malus_domestica MD02G1121900.v1.1 MD05G1128700.v1.1 MD10G1131900.v1.1 MD15G1235500.v1.1 MD15G1235600.v1.1
prunus_persica Prupe.7G177500_v2.0.a1 Prupe.7G177600_v2.0.a1 Prupe.8G172800_v2.0.a1
pyrus_communis pycom05g12460 pycom05g12470 pycom10g11300
rosa_chinensis RchiOBHm_Chr2g0097971 RchiOBHm_Chr2g0098021 RchiOBHm_Chr2g0098061 RchiOBHm_Chr6g0257301 RchiOBHm_Chr6g0279511 RchiOBHm_Chr6g0279521
rosa_laevigata RLG00000013139 RLG00000013140 RLG00000013141 RLG00000016747 RLG00000016749 RLG00000016750 RLG00000016751 RLG00000016752
rosa_multiflora Rmu_sc0002648.1_g000005 Rmu_sc0002648.1_g000006 Rmu_sc0004649.1_g000019 Rmu_sc0004649.1_g000021 Rmu_sc0009572.1_g000002 Rmu_sc0013919.1_g000008 Rmu_sc0013919.1_g000009
rosa_roxburghii Rroxscaffold_2G00144370 Rroxscaffold_2G00144380 Rroxscaffold_2G00144390 Rroxscaffold_2G00144410 Rroxscaffold_4G00294600 Rroxscaffold_7G00188840 Rroxscaffold_7G00188850 Rroxscaffold_7G00188860
rosa_rugosa Rorug02G0069400 Rorug02G0069600 Rorug02G0069700 Rorug02G0069800 Rorug06G0098000.1 Rorug06G0125000 Rorug06G0125100 Rorug06G0125200
rosa_samantha Rh2AG116400 Rh2AG116800 Rh2AG116900 Rh2AG117000 Rh2BG119300 Rh2BG119500 Rh2BG119600 Rh2BG119700 Rh2BG119800 Rh2CG120900 Rh2CG121000 Rh2CG121200 Rh2CG121300 Rh2CG121400 Rh2CG121500 Rh2DG120600 Rh2DG121100 Rh2DG121200 Rh2DG121500 Rh6AG091200 Rh6AG234100 Rh6BG238400 Rh6BG238500 Rh6BG238600 Rh6CG078800 Rh6CG240400 Rh6CG240500 Rh6CG240600 Rh6DG074600 Rh6DG232000 Rh6DG232100
rosa_wichuraiana Rw2G009120 Rw2G009130 Rw2G009140 Rw6G020420 Rw6G020430 Rw6G020440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 554
AccB1I GGYRCC 1 cut(s) 958
AciI CCGC 2 cut(s) 152, 983
AclWI GGATC 5 cut(s) 74, 228, 241, 449, 672
AcsI RAATTY 5 cut(s) 260, 325, 362, 542, 967
AcuI CTGAAG 2 cut(s) 210, 680
AcvI CACGTG 1 cut(s) 590
AfaI GTAC 3 cut(s) 181, 500, 524
AfiI CCNNNNNNNGG 1 cut(s) 514
AflIII ACRYGT 1 cut(s) 589
AgsI TTSAA 4 cut(s) 491, 597, 694, 749
AjuI GAANNNNNNNTTGG 2 cut(s) 365, 397
AluBI AGCT 3 cut(s) 536, 684, 788
AluI AGCT 3 cut(s) 536, 684, 788
Alw21I GWGCWC 2 cut(s) 538, 686
Alw26I GTCTC 3 cut(s) 99, 121, 285
AlwI GGATC 5 cut(s) 74, 228, 241, 449, 672
Ama87I CYCGRG 1 cut(s) 347
ApeKI GCWGC 1 cut(s) 920
ApoI RAATTY 5 cut(s) 260, 325, 362, 542, 967
AspLEI GCGC 1 cut(s) 941
AspS9I GGNCC 1 cut(s) 344
AsuC2I CCSGG 1 cut(s) 320
AsuHPI GGTGA 1 cut(s) 226
AvaI CYCGRG 1 cut(s) 347
AvaII GGWCC 1 cut(s) 344
BaeGI GKGCMC 1 cut(s) 63
BamHI GGATCC 1 cut(s) 233
BanI GGYRCC 1 cut(s) 958
BanII GRGCYC 2 cut(s) 538, 686
BbrPI CACGTG 1 cut(s) 590
BbsI GAAGAC 1 cut(s) 756
Bbv12I GWGCWC 2 cut(s) 538, 686
BbvI GCAGC 1 cut(s) 932
BccI CCATC 1 cut(s) 334
BcnI CCSGG 1 cut(s) 320
BcoDI GTCTC 3 cut(s) 99, 121, 285
BfaI CTAG 1 cut(s) 917
BfmI CTRYAG 1 cut(s) 206
BisI GCNGC 2 cut(s) 921, 984
BlsI GCNGC 2 cut(s) 922, 985
Bme1390I CCNGG 1 cut(s) 320
Bme18I GGWCC 1 cut(s) 344
BmeT110I CYCGRG 1 cut(s) 347
BmgT120I GGNCC 1 cut(s) 344
BmiI GGNNCC 4 cut(s) 235, 345, 346, 960
BmrFI CCNGG 1 cut(s) 320
BmsI GCATC 1 cut(s) 750
BpiI GAAGAC 1 cut(s) 756
BpuMI CCSGG 1 cut(s) 320
BsaAI YACGTR 2 cut(s) 498, 590
BsaI GGTCTC 1 cut(s) 285
BsaJI CCNNGG 2 cut(s) 319, 348
BsaWI WCCGGW 1 cut(s) 254
BsaXI ACNNNNNCTCC 2 cut(s) 167, 197
Bsc4I CCNNNNNNNGG 1 cut(s) 514
Bse1I ACTGG 1 cut(s) 83
BseDI CCNNGG 2 cut(s) 319, 348
BseGI GGATG 5 cut(s) 469, 578, 705, 777, 892
BseLI CCNNNNNNNGG 1 cut(s) 514
BseMII CTCAG 1 cut(s) 462
BseNI ACTGG 1 cut(s) 83
BseSI GKGCMC 1 cut(s) 63
BseXI GCAGC 1 cut(s) 932
BshNI GGYRCC 1 cut(s) 958
BsiHKAI GWGCWC 2 cut(s) 538, 686
BsiHKCI CYCGRG 1 cut(s) 347
BsiSI CCGG 3 cut(s) 237, 255, 319
BslFI GGGAC 3 cut(s) 330, 896, 958
BslI CCNNNNNNNGG 1 cut(s) 514
BsmAI GTCTC 3 cut(s) 99, 121, 285
BsmFI GGGAC 3 cut(s) 330, 896, 958
BsmI GAATGC 2 cut(s) 20, 832
Bso31I GGTCTC 1 cut(s) 285
BsoBI CYCGRG 1 cut(s) 347
Bsp1286I GDGCHC 3 cut(s) 63, 538, 686
Bsp1407I TGTACA 1 cut(s) 522
Bsp143I GATC 4 cut(s) 79, 233, 454, 664
BspACI CCGC 2 cut(s) 152, 983
BspCNI CTCAG 1 cut(s) 461
BspLI GGNNCC 4 cut(s) 235, 345, 346, 960
BspMAI CTGCAG 1 cut(s) 210
BspPI GGATC 5 cut(s) 74, 228, 241, 449, 672
BspT107I GGYRCC 1 cut(s) 958
BspTNI GGTCTC 1 cut(s) 285
BsrGI TGTACA 1 cut(s) 522
BsrI ACTGG 1 cut(s) 83
BssECI CCNNGG 2 cut(s) 319, 348
BssMI GATC 4 cut(s) 79, 233, 454, 664
Bst4CI ACNGT 4 cut(s) 179, 316, 503, 807
BstAUI TGTACA 1 cut(s) 522
BstBAI YACGTR 2 cut(s) 498, 590
BstC8I GCNNGC 2 cut(s) 636, 830
BstDEI CTNAG 1 cut(s) 448
BstF5I GGATG 5 cut(s) 469, 578, 705, 777, 892
BstHHI GCGC 1 cut(s) 941
BstKTI GATC 4 cut(s) 82, 236, 457, 667
BstMAI GTCTC 3 cut(s) 99, 121, 285
BstMBI GATC 4 cut(s) 79, 233, 454, 664
BstMWI GCNNNNNNNGC 1 cut(s) 122
BstNSI RCATGY 1 cut(s) 832
BstSCI CCNGG 1 cut(s) 318
BstSFI CTRYAG 1 cut(s) 206
BstSLI GKGCMC 1 cut(s) 63
BstV1I GCAGC 1 cut(s) 932
BstV2I GAAGAC 1 cut(s) 756
BstX2I RGATCY 2 cut(s) 233, 664
BstYI RGATCY 2 cut(s) 233, 664
BtsCI GGATG 5 cut(s) 469, 578, 705, 777, 892
BtsIMutI CAGTG 1 cut(s) 656
Cac8I GCNNGC 2 cut(s) 636, 830
CfoI GCGC 1 cut(s) 941
Cfr13I GGNCC 1 cut(s) 344
Csp6I GTAC 3 cut(s) 180, 499, 523
CspCI CAANNNNNGTGG 4 cut(s) 144, 179, 936, 971
CviAII CATG 7 cut(s) 419, 478, 584, 825, 829, 866, 964
CviJI RGCY 8 cut(s) 68, 138, 536, 634, 684, 761, 788, 986
CviKI_1 RGCY 8 cut(s) 68, 138, 536, 634, 684, 761, 788, 986
CviQI GTAC 3 cut(s) 180, 499, 523
DdeI CTNAG 1 cut(s) 448
DpnI GATC 4 cut(s) 81, 235, 456, 666
DpnII GATC 4 cut(s) 79, 233, 454, 664
DraI TTTAAA 1 cut(s) 193
EciI GGCGGA 1 cut(s) 141
Ecl136II GAGCTC 2 cut(s) 536, 684
Eco24I GRGCYC 2 cut(s) 538, 686
Eco31I GGTCTC 1 cut(s) 285
Eco47I GGWCC 1 cut(s) 344
Eco53kI GAGCTC 2 cut(s) 536, 684
Eco57I CTGAAG 2 cut(s) 210, 680
Eco72I CACGTG 1 cut(s) 590
Eco88I CYCGRG 1 cut(s) 347
EcoICRI GAGCTC 2 cut(s) 536, 684
EcoO109I RGGNCCY 1 cut(s) 344
EcoT22I ATGCAT 2 cut(s) 830, 834
EcoT38I GRGCYC 2 cut(s) 538, 686
FaeI CATG 7 cut(s) 422, 481, 587, 828, 832, 869, 967
FaqI GGGAC 3 cut(s) 330, 896, 958
FatI CATG 7 cut(s) 418, 477, 583, 824, 828, 865, 963
Fnu4HI GCNGC 2 cut(s) 921, 984
FokI GGATG 5 cut(s) 476, 585, 712, 764, 879
FriOI GRGCYC 2 cut(s) 538, 686
Fsp4HI GCNGC 2 cut(s) 921, 984
FspBI CTAG 1 cut(s) 917
GlaI GCGC 1 cut(s) 940
GluI GCNGC 2 cut(s) 921, 984
HapII CCGG 3 cut(s) 237, 255, 319
HhaI GCGC 1 cut(s) 941
Hin1II CATG 7 cut(s) 422, 481, 587, 828, 832, 869, 967
Hin6I GCGC 1 cut(s) 939
HinP1I GCGC 1 cut(s) 939
HinfI GANTC 2 cut(s) 107, 859
HpaII CCGG 3 cut(s) 237, 255, 319
HphI GGTGA 1 cut(s) 226
Hpy166II GTNNAC 1 cut(s) 217
Hpy188I TCNGA 5 cut(s) 266, 290, 398, 540, 716
Hpy188III TCNNGA 4 cut(s) 228, 347, 458, 912
Hpy8I GTNNAC 1 cut(s) 217
Hpy99I CGWCG 1 cut(s) 607
HpyAV CCTTC 3 cut(s) 169, 441, 655
HpyCH4III ACNGT 4 cut(s) 179, 316, 503, 807
HpyCH4IV ACGT 3 cut(s) 497, 589, 602
HpyCH4V TGCA 7 cut(s) 20, 74, 208, 587, 615, 828, 832
HpyF10VI GCNNNNNNNGC 1 cut(s) 122
HpyF3I CTNAG 1 cut(s) 448
HpySE526I ACGT 3 cut(s) 497, 589, 602
Hsp92II CATG 7 cut(s) 422, 481, 587, 828, 832, 869, 967
HspAI GCGC 1 cut(s) 939
KflI GGGWCCC 1 cut(s) 344
Kzo9I GATC 4 cut(s) 79, 233, 454, 664
LmnI GCTCC 2 cut(s) 533, 568
Lsp1109I GCAGC 1 cut(s) 932
LweI GCATC 1 cut(s) 750
MaeI CTAG 1 cut(s) 917
MaeII ACGT 3 cut(s) 497, 589, 602
MaeIII GTNAC 2 cut(s) 85, 503
MalI GATC 4 cut(s) 81, 235, 456, 666
MboI GATC 4 cut(s) 79, 233, 454, 664
MboII GAAGA 6 cut(s) 16, 19, 463, 479, 659, 761
MfeI CAATTG 1 cut(s) 567
MflI RGATCY 2 cut(s) 233, 664
MhlI GDGCHC 3 cut(s) 63, 538, 686
MluCI AATT 9 cut(s) 260, 305, 325, 362, 436, 491, 542, 567, 967
MlyI GAGTC 1 cut(s) 101
MmeI TCCRAC 2 cut(s) 325, 920
Mph1103I ATGCAT 2 cut(s) 830, 834
MseI TTAA 5 cut(s) 192, 771, 809, 839, 997
MslI CAYNNNNRTG 1 cut(s) 588
MspI CCGG 3 cut(s) 237, 255, 319
MspR9I CCNGG 1 cut(s) 320
MunI CAATTG 1 cut(s) 567
Mva1269I GAATGC 2 cut(s) 20, 832
MwoI GCNNNNNNNGC 1 cut(s) 122
NciI CCSGG 1 cut(s) 320
NdeII GATC 4 cut(s) 79, 233, 454, 664
NlaIII CATG 7 cut(s) 422, 481, 587, 828, 832, 869, 967
NlaIV GGNNCC 4 cut(s) 235, 345, 346, 960
NsiI ATGCAT 2 cut(s) 830, 834
NspI RCATGY 1 cut(s) 832
PaeI GCATGC 1 cut(s) 832
PcsI WCGNNNNNNNCGW 2 cut(s) 402, 411
PctI GAATGC 2 cut(s) 20, 832
PfeI GAWTC 1 cut(s) 859
PkrI GCNGC 2 cut(s) 922, 985
PleI GAGTC 1 cut(s) 101
PmaCI CACGTG 1 cut(s) 590
PmlI CACGTG 1 cut(s) 590
PpsI GAGTC 1 cut(s) 101
Ppu21I YACGTR 2 cut(s) 498, 590
PpuMI RGGWCCY 1 cut(s) 344
PsiI TTATAA 1 cut(s) 554
Psp124BI GAGCTC 2 cut(s) 538, 686
Psp5II RGGWCCY 1 cut(s) 344
PspCI CACGTG 1 cut(s) 590
PspN4I GGNNCC 4 cut(s) 235, 345, 346, 960
PspPI GGNCC 1 cut(s) 344
PspPPI RGGWCCY 1 cut(s) 344
PstI CTGCAG 1 cut(s) 210
PsuI RGATCY 2 cut(s) 233, 664
RsaI GTAC 3 cut(s) 181, 500, 524
RsaNI GTAC 3 cut(s) 180, 499, 523
RseI CAYNNNNRTG 1 cut(s) 588
SacI GAGCTC 2 cut(s) 538, 686
SaqAI TTAA 5 cut(s) 192, 771, 809, 839, 997
SatI GCNGC 2 cut(s) 921, 984
Sau3AI GATC 4 cut(s) 79, 233, 454, 664
Sau96I GGNCC 1 cut(s) 344
SchI GAGTC 1 cut(s) 101
ScrFI CCNGG 1 cut(s) 320
SduI GDGCHC 3 cut(s) 63, 538, 686
SfaNI GCATC 1 cut(s) 750
SfcI CTRYAG 1 cut(s) 206
SinI GGWCC 1 cut(s) 344
SmiMI CAYNNNNRTG 1 cut(s) 588
SphI GCATGC 1 cut(s) 832
Sse9I AATT 9 cut(s) 260, 305, 325, 362, 436, 491, 542, 567, 967
SsiI CCGC 2 cut(s) 152, 983
SspMI CTAG 1 cut(s) 917
SstI GAGCTC 2 cut(s) 538, 686
StyD4I CCNGG 1 cut(s) 318
TaaI ACNGT 4 cut(s) 179, 316, 503, 807
TaiI ACGT 3 cut(s) 500, 592, 605
TaqI TCGA 3 cut(s) 273, 414, 675
TasI AATT 9 cut(s) 260, 305, 325, 362, 436, 491, 542, 567, 967
TatI WGTACW 1 cut(s) 522
TauI GCSGC 1 cut(s) 986
TfiI GAWTC 1 cut(s) 859
Tru1I TTAA 5 cut(s) 192, 771, 809, 839, 997
Tru9I TTAA 5 cut(s) 192, 771, 809, 839, 997
TscAI CASTG 1 cut(s) 663
TseI GCWGC 1 cut(s) 920
TspDTI ATGAA 5 cut(s) 85, 373, 640, 716, 980
TspRI CASTG 1 cut(s) 663
VpaK11BI GGWCC 1 cut(s) 344
XapI RAATTY 5 cut(s) 260, 325, 362, 542, 967
XceI RCATGY 1 cut(s) 832
XspI CTAG 1 cut(s) 917
Zsp2I ATGCAT 2 cut(s) 830, 834
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.