RchiOBHm_Chr6g0279511

GDSL esterase lipase At5g55050-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000448
Physical Location & Seq
Reverse (-)
42631279 .. 42636273
4995 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ25065

Sequence Viewer

Length: 2082 bp
ATGGAAAACAAATGGGTTCTTCCTCTAGCCCTATCCTTGTTTATAACTGTTCTTAGCTTGGCAGCAGCAGCTAAGCCAGTACTGCCACCAGTCTTCATATTTGGTGATTCAACAGCAGATGTCGGCACCAATAACTTCTTGCCGGCTAGCAAGGCAAGAGCTGACTTCCCCCCCAATGGCATTGACTTTCCTGGCACCTCAAAACCCACCGGAAGGTTCAGCAATGGCCTTAACAGTGCTGATTTTCTTGCCCGGTATTTTGGTTACAAGAGAAGTCCAAGCCCCTTTCTTTCTCTGAAAACTACTTCTCTTCAAAAGAAGAAGTTTAATGGTATCAACTTTGCTTCTGGAGGGTCTGGTCTTCTTGACACAACTGGACAGACAATGGCAAGTCACTTTCTTGGGGAACAACTGACATTGATGAAGTTTGGAACTGGAAATATTCCATTTGGTGCCTCATTCAAAAACCAGAAAAAATTTATCTCATTAACAGAGCAGATACAGCAATTTTCATCTGTCAAGAACAATCTTACGGCCTTGATGGGTTCGGTAGCAACTGAGAAGTTTCTTAAAGATTCTTTGATCTTCATCAGCACCGGCAGCAATGACCTTTTCGGATACTACCATTCAAAGAGTTCCATTCCGAAGGAAAAGTTCTTGTCCTCTTTAGAAGTAGCTTATGAGAATCACTTGAAGACTCTATACAATCTTGGAGCAAGGAAGTTTGGCATCATCAGCATTGCCCCGATTGGCTGCTGCCCATCTCAGAGGATTTTCAATGCTACTGGGGGATGTTTGGAAGAGCTGAATGATAATGCAATAGCTTTTCATTCAAGATTGGATGCCCTCTTGTGCAAGCTTAGCTCAGAATACAAGGGCATGAAGTACTCACTTGGAAATTCATATGAAATGACAATCAATGTCATACAGAACCCTCTTCCATTCAATTTTACACAAGTGGCAGCTGCATGTTGTGGAACTGGGAAGCTCAATGCTGAAAACTTCTGTAAACGAGGTGCAAATCTCTGTTTGAATCGCGATCAATACTTGTTCTGGGATCGATTTCATCCAACACAGGCTGCTTCTAAGTTGGCTGCTATTGCCCTCTACAGTGTTCTTCTATCCTTGGTCATAGCTGTTCTTAATTTAGCAGAAGCAGCTGTACCAGCAATCTTCATACTAGGTGACTCCACTGCTGATGTTGGCACCAACAACTTCTTGCCAGGTAGCATGGCCAGGGCTGATTTCCCCTACAATGGAATCGACTTTTGTAACTCAACACCCACTGGAAGGTTCAGCAATGGCCTTAATACAGCTGATTTTCTTGGCTTCAGCTTTGCTTCTGGAGGGTCTGGCCTCTTTGATACCACTGGACAAAGAATGACAAAAAATTGTATTCCACTAGCAGAGCAGATACAGCAATTTTCGTCTGTCCGGAGTAATCTCACCGCCTTAATGGGCCCGGTAGCAACTGAGACGTATCTTTCAAAGTCTTTGTTCTTCATCAGCATTGGCAGCAATGACATTTTCGAATACTACAGCTCAAACAGTTCAATTCCTAAGGAACAATTCTTGTCCTCTTTAGTACTCGCTTATGAGAATCACTTGAAGACGTTACTTAATCTTGGAGCAAGGAAGTTAGGAATTATCAGTGTCGCCCCGATTGGCTGCTGCCCATCTCAGAGATTTTTTAATGCTACTGGCGGCTGTATAGAGGAGCTGAATGATCATGCAAAAGCTTTCCATTCAAAGCTGGATGTGCTTATGCACAAGCTCAGCTCAGAATTTGAGGGCTTGAAGTACTCACTTGGAAATGCATTTGAAATGACTATAAATGTCATACAGAACCCTCTTGCATTCAATTTTACACAAGTGGCAGCTGCATGTTGTGGAACTGGGAAGCTCAATGCTGAAAACTTCTGTAAACCAGATGCAAATCTCTGTTCGAATCGCGATCAATACTTGTTCTGGGATCGATTTCATCCAACACAGGCTGCTTATAAGTTGGCTGCTGTAACCCTCTATGGTGGTGGACCACAATTTGTAACCCCAATTAATTTTGCTCAGTTGGCTGAGGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lipase_GDSL

Protein Analysis

693

Amino Acids

75.22

Weight (kDa)

8.6

Isoelectric Point (pI)

21.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lipase_GDSL PF00657 31 - 367 6.2e-30 GDSL-like Lipase/Acylhydrolase
Lipase_GDSL PF00657 391 - 671 1.7e-26 GDSL-like Lipase/Acylhydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000448)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10790 FvH4_1g10790 FvH4_1g10790 FvH4_1g10791 FvH4_1g10800 FvH4_2g15970 FvH4_2g15980 FvH4_2g15990
malus_domestica MD02G1121900.v1.1 MD05G1128700.v1.1 MD10G1131900.v1.1 MD15G1235500.v1.1 MD15G1235600.v1.1
prunus_persica Prupe.7G177500_v2.0.a1 Prupe.7G177600_v2.0.a1 Prupe.8G172800_v2.0.a1
pyrus_communis pycom05g12460 pycom05g12470 pycom10g11300
rosa_chinensis RchiOBHm_Chr2g0097971 RchiOBHm_Chr2g0098021 RchiOBHm_Chr2g0098061 RchiOBHm_Chr6g0257301 RchiOBHm_Chr6g0279511 RchiOBHm_Chr6g0279521
rosa_laevigata RLG00000013139 RLG00000013140 RLG00000013141 RLG00000016747 RLG00000016749 RLG00000016750 RLG00000016751 RLG00000016752
rosa_multiflora Rmu_sc0002648.1_g000005 Rmu_sc0002648.1_g000006 Rmu_sc0004649.1_g000019 Rmu_sc0004649.1_g000021 Rmu_sc0009572.1_g000002 Rmu_sc0013919.1_g000008 Rmu_sc0013919.1_g000009
rosa_roxburghii Rroxscaffold_2G00144370 Rroxscaffold_2G00144380 Rroxscaffold_2G00144390 Rroxscaffold_2G00144410 Rroxscaffold_4G00294600 Rroxscaffold_7G00188840 Rroxscaffold_7G00188850 Rroxscaffold_7G00188860
rosa_rugosa Rorug02G0069400 Rorug02G0069600 Rorug02G0069700 Rorug02G0069800 Rorug06G0098000.1 Rorug06G0125000 Rorug06G0125100 Rorug06G0125200
rosa_samantha Rh2AG116400 Rh2AG116800 Rh2AG116900 Rh2AG117000 Rh2BG119300 Rh2BG119500 Rh2BG119600 Rh2BG119700 Rh2BG119800 Rh2CG120900 Rh2CG121000 Rh2CG121200 Rh2CG121300 Rh2CG121400 Rh2CG121500 Rh2DG120600 Rh2DG121100 Rh2DG121200 Rh2DG121500 Rh6AG091200 Rh6AG234100 Rh6BG238400 Rh6BG238500 Rh6BG238600 Rh6CG078800 Rh6CG240400 Rh6CG240500 Rh6CG240600 Rh6DG074600 Rh6DG232000 Rh6DG232100
rosa_wichuraiana Rw2G009120 Rw2G009130 Rw2G009140 Rw6G020420 Rw6G020430 Rw6G020440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 44, 2001
AccB1I GGYRCC 4 cut(s) 125, 194, 452, 1205
AccII CGCG 2 cut(s) 1038, 1953
AccIII TCCGGA 1 cut(s) 1434
AciI CCGC 2 cut(s) 1449, 1704
AclWI GGATC 2 cut(s) 1065, 1980
AcoI YGGCCR 1 cut(s) 1233
AcsI RAATTY 3 cut(s) 476, 898, 1784
AcuI CTGAAG 1 cut(s) 1315
AfaI GTAC 5 cut(s) 81, 887, 1164, 1587, 1802
AfiI CCNNNNNNNGG 4 cut(s) 176, 213, 1256, 1290
AjnI CCWGG 3 cut(s) 190, 1222, 1235
Alw26I GTCTC 1 cut(s) 1469
AlwI GGATC 2 cut(s) 1065, 1980
Aor13HI TCCGGA 1 cut(s) 1434
AoxI GGCC 6 cut(s) 226, 534, 1233, 1303, 1354, 1459
ApaI GGGCCC 1 cut(s) 1463
ApoI RAATTY 3 cut(s) 476, 898, 1784
AseI ATTAAT 1 cut(s) 2055
AspS9I GGNCC 3 cut(s) 1459, 1460, 2033
AsuC2I CCSGG 2 cut(s) 253, 1463
AsuHPI GGTGA 3 cut(s) 116, 1196, 1438
AsuII TTCGAA 2 cut(s) 1530, 1946
AsuNHI GCTAGC 1 cut(s) 146
AvaII GGWCC 1 cut(s) 2033
AxyI CCTNAGG 1 cut(s) 1560
BaeGI GKGCMC 1 cut(s) 1463
BalI TGGCCA 1 cut(s) 1235
BanI GGYRCC 4 cut(s) 125, 194, 452, 1205
BanII GRGCYC 1 cut(s) 1463
BarI GAAGNNNNNNTAC 4 cut(s) 686, 718, 1146, 1178
BbsI GAAGAC 4 cut(s) 85, 353, 701, 1616
BbvCI CCTCAGC 1 cut(s) 2073
BccI CCATC 3 cut(s) 535, 769, 1684
BceAI ACGGC 1 cut(s) 549
BciT130I CCWGG 3 cut(s) 192, 1224, 1237
BciVI GTATCC 1 cut(s) 611
BclI TGATCA 1 cut(s) 1726
BcnI CCSGG 2 cut(s) 253, 1463
BcoDI GTCTC 1 cut(s) 1469
BfaI CTAG 4 cut(s) 26, 147, 1181, 1403
BfmI CTRYAG 2 cut(s) 1108, 1537
BfuI GTATCC 1 cut(s) 611
BlpI GCTNAGC 3 cut(s) 72, 860, 1775
BmcAI AGTACT 4 cut(s) 81, 887, 1587, 1802
Bme1390I CCNGG 5 cut(s) 192, 253, 1224, 1237, 1463
Bme18I GGWCC 1 cut(s) 2033
BmgT120I GGNCC 3 cut(s) 1459, 1460, 2033
BmiI GGNNCC 5 cut(s) 127, 196, 454, 1207, 1461
BmrFI CCNGG 5 cut(s) 192, 253, 1224, 1237, 1463
BmrI ACTGGG 3 cut(s) 795, 990, 1905
BmsI GCATC 3 cut(s) 738, 832, 1921
BmtI GCTAGC 1 cut(s) 150
BmuI ACTGGG 3 cut(s) 795, 990, 1905
BpiI GAAGAC 4 cut(s) 85, 353, 701, 1616
BpmI CTGGAG 2 cut(s) 369, 1365
Bpu10I CCTNAGC 1 cut(s) 2073
Bpu1102I GCTNAGC 3 cut(s) 72, 860, 1775
Bpu14I TTCGAA 2 cut(s) 1530, 1946
BpuMI CCSGG 2 cut(s) 253, 1463
Bsa29I ATCGAT 2 cut(s) 1060, 1975
BsaBI GATNNNNATC 2 cut(s) 587, 1935
BsaJI CCNNGG 2 cut(s) 1125, 1236
BsaWI WCCGGW 2 cut(s) 209, 1434
Bsc4I CCNNNNNNNGG 4 cut(s) 176, 213, 1256, 1290
Bse118I RCCGGY 2 cut(s) 142, 596
Bse21I CCTNAGG 1 cut(s) 1560
Bse3DI GCAATG 5 cut(s) 229, 610, 738, 1306, 1525
Bse8I GATNNNNATC 2 cut(s) 587, 1935
BseAI TCCGGA 1 cut(s) 1434
BseBI CCWGG 3 cut(s) 192, 1224, 1237
BseCI ATCGAT 2 cut(s) 1060, 1975
BseDI CCNNGG 2 cut(s) 1125, 1236
BseGI GGATG 5 cut(s) 797, 847, 1066, 1762, 1981
BseJI GATNNNNATC 2 cut(s) 587, 1935
BseLI CCNNNNNNNGG 4 cut(s) 176, 213, 1256, 1290
BseMI GCAATG 5 cut(s) 229, 610, 738, 1306, 1525
BseMII CTCAG 9 cut(s) 549, 779, 879, 1464, 1694, 1789, 1794, 2064, 2078
BseRI GAGGAG 1 cut(s) 1730
BseSI GKGCMC 1 cut(s) 1463
Bsh1236I CGCG 2 cut(s) 1038, 1953
BshFI GGCC 6 cut(s) 228, 536, 1235, 1305, 1356, 1461
BshNI GGYRCC 4 cut(s) 125, 194, 452, 1205
BshVI ATCGAT 2 cut(s) 1060, 1975
BsiSI CCGG 6 cut(s) 143, 210, 253, 597, 1435, 1463
BslI CCNNNNNNNGG 4 cut(s) 176, 213, 1256, 1290
BsmAI GTCTC 1 cut(s) 1469
BsmBI CGTCTC 1 cut(s) 1469
BsmI GAATGC 1 cut(s) 1856
BsnI GGCC 6 cut(s) 228, 536, 1235, 1305, 1356, 1461
Bsp119I TTCGAA 2 cut(s) 1530, 1946
Bsp120I GGGCCC 1 cut(s) 1459
Bsp1286I GDGCHC 1 cut(s) 1463
Bsp13I TCCGGA 1 cut(s) 1434
Bsp143I GATC 6 cut(s) 582, 1039, 1057, 1726, 1954, 1972
Bsp1720I GCTNAGC 3 cut(s) 72, 860, 1775
Bsp68I TCGCGA 2 cut(s) 1038, 1953
BspACI CCGC 2 cut(s) 1449, 1704
BspANI GGCC 6 cut(s) 228, 536, 1235, 1305, 1356, 1461
BspCNI CTCAG 9 cut(s) 550, 778, 878, 1465, 1693, 1788, 1793, 2065, 2077
BspDI ATCGAT 2 cut(s) 1060, 1975
BspEI TCCGGA 1 cut(s) 1434
BspFNI CGCG 2 cut(s) 1038, 1953
BspLI GGNNCC 5 cut(s) 127, 196, 454, 1207, 1461
BspOI GCTAGC 1 cut(s) 150
BspPI GGATC 2 cut(s) 1065, 1980
BspQI GCTCTTC 1 cut(s) 795
BspT104I TTCGAA 2 cut(s) 1530, 1946
BspT107I GGYRCC 4 cut(s) 125, 194, 452, 1205
BsrDI GCAATG 5 cut(s) 229, 610, 738, 1306, 1525
BsrFI RCCGGY 2 cut(s) 142, 596
BssAI RCCGGY 2 cut(s) 142, 596
BssECI CCNNGG 2 cut(s) 1125, 1236
BssMI GATC 6 cut(s) 582, 1039, 1057, 1726, 1954, 1972
BssT1I CCWWGG 1 cut(s) 1125
Bst2UI CCWGG 3 cut(s) 192, 1224, 1237
Bst4CI ACNGT 4 cut(s) 49, 236, 1112, 1550
Bst6I CTCTTC 3 cut(s) 315, 795, 942
BstBI TTCGAA 2 cut(s) 1530, 1946
BstC8I GCNNGC 3 cut(s) 144, 148, 857
BstF5I GGATG 5 cut(s) 797, 847, 1066, 1762, 1981
BstFNI CGCG 2 cut(s) 1038, 1953
BstKTI GATC 6 cut(s) 585, 1042, 1060, 1729, 1957, 1975
BstMAI GTCTC 1 cut(s) 1469
BstMBI GATC 6 cut(s) 582, 1039, 1057, 1726, 1954, 1972
BstNI CCWGG 3 cut(s) 192, 1224, 1237
BstNSI RCATGY 2 cut(s) 972, 1887
BstSCI CCNGG 5 cut(s) 190, 251, 1222, 1235, 1461
BstSFI CTRYAG 2 cut(s) 1108, 1537
BstSLI GKGCMC 1 cut(s) 1463
BstUI CGCG 2 cut(s) 1038, 1953
BstV2I GAAGAC 4 cut(s) 85, 353, 701, 1616
Bsu15I ATCGAT 2 cut(s) 1060, 1975
Bsu36I CCTNAGG 1 cut(s) 1560
BsuI GTATCC 1 cut(s) 611
BsuRI GGCC 6 cut(s) 228, 536, 1235, 1305, 1356, 1461
BsuTUI ATCGAT 2 cut(s) 1060, 1975
BtsCI GGATG 5 cut(s) 797, 847, 1066, 1762, 1981
BtsI GCAGTG 1 cut(s) 1191
BtsIMutI CAGTG 6 cut(s) 241, 1117, 1191, 1284, 1368, 1657
BtuMI TCGCGA 2 cut(s) 1038, 1953
Cac8I GCNNGC 3 cut(s) 144, 148, 857
Cfr10I RCCGGY 2 cut(s) 142, 596
Cfr13I GGNCC 3 cut(s) 1459, 1460, 2033
ClaI ATCGAT 2 cut(s) 1060, 1975
Csp6I GTAC 5 cut(s) 80, 886, 1163, 1586, 1801
CviAII CATG 5 cut(s) 880, 969, 1231, 1730, 1884
CviQI GTAC 5 cut(s) 80, 886, 1163, 1586, 1801
DpnI GATC 6 cut(s) 584, 1041, 1059, 1728, 1956, 1974
DpnII GATC 6 cut(s) 582, 1039, 1057, 1726, 1954, 1972
EaeI YGGCCR 1 cut(s) 1233
Eam1104I CTCTTC 3 cut(s) 315, 795, 942
EarI CTCTTC 3 cut(s) 315, 795, 942
Eco130I CCWWGG 1 cut(s) 1125
Eco24I GRGCYC 1 cut(s) 1463
Eco47I GGWCC 1 cut(s) 2033
Eco57I CTGAAG 1 cut(s) 1315
Eco81I CCTNAGG 1 cut(s) 1560
EcoRII CCWGG 3 cut(s) 190, 1222, 1235
EcoT14I CCWWGG 1 cut(s) 1125
EcoT22I ATGCAT 1 cut(s) 1819
EcoT38I GRGCYC 1 cut(s) 1463
ErhI CCWWGG 1 cut(s) 1125
Esp3I CGTCTC 1 cut(s) 1469
FaeI CATG 5 cut(s) 883, 972, 1234, 1733, 1887
FatI CATG 5 cut(s) 879, 968, 1230, 1729, 1883
FauNDI CATATG 1 cut(s) 904
FbaI TGATCA 1 cut(s) 1726
FokI GGATG 5 cut(s) 804, 854, 1053, 1769, 1968
FriOI GRGCYC 1 cut(s) 1463
FspBI CTAG 4 cut(s) 26, 147, 1181, 1403
GsuI CTGGAG 2 cut(s) 369, 1365
HaeIII GGCC 6 cut(s) 228, 536, 1235, 1305, 1356, 1461
HapII CCGG 6 cut(s) 143, 210, 253, 597, 1435, 1463
Hin1II CATG 5 cut(s) 883, 972, 1234, 1733, 1887
HindIII AAGCTT 2 cut(s) 857, 1737
HinfI GANTC 9 cut(s) 107, 575, 685, 697, 1033, 1187, 1260, 1600, 1948
HpaII CCGG 6 cut(s) 143, 210, 253, 597, 1435, 1463
HphI GGTGA 3 cut(s) 116, 1196, 1438
Hpy166II GTNNAC 3 cut(s) 1010, 1925, 2033
Hpy188I TCNGA 7 cut(s) 297, 617, 645, 768, 868, 1683, 1783
Hpy188III TCNNGA 8 cut(s) 348, 365, 520, 834, 1037, 1344, 1435, 1952
Hpy8I GTNNAC 3 cut(s) 1010, 1925, 2033
HpyAV CCTTC 3 cut(s) 207, 640, 1284
HpyCH4III ACNGT 4 cut(s) 49, 236, 1112, 1550
HpyCH4IV ACGT 2 cut(s) 1478, 1613
HpySE526I ACGT 2 cut(s) 1478, 1613
Hsp92II CATG 5 cut(s) 883, 972, 1234, 1733, 1887
Kpn2I TCCGGA 1 cut(s) 1434
KroI GCCGGC 1 cut(s) 142
KroNI GCCGGC 1 cut(s) 144
Ksp22I TGATCA 1 cut(s) 1726
Kzo9I GATC 6 cut(s) 582, 1039, 1057, 1726, 1954, 1972
LguI GCTCTTC 1 cut(s) 795
LmnI GCTCC 3 cut(s) 713, 1628, 1717
LweI GCATC 3 cut(s) 738, 832, 1921
MaeI CTAG 4 cut(s) 26, 147, 1181, 1403
MaeII ACGT 2 cut(s) 1478, 1613
MaeIII GTNAC 7 cut(s) 263, 392, 1184, 1271, 1614, 2014, 2044
MalI GATC 6 cut(s) 584, 1041, 1059, 1728, 1956, 1974
MboI GATC 6 cut(s) 582, 1039, 1057, 1726, 1954, 1972
MhlI GDGCHC 1 cut(s) 1463
MlsI TGGCCA 1 cut(s) 1235
MluNI TGGCCA 1 cut(s) 1235
MlyI GAGTC 2 cut(s) 691, 1181
MmeI TCCRAC 2 cut(s) 1094, 2009
Mox20I TGGCCA 1 cut(s) 1235
Mph1103I ATGCAT 1 cut(s) 1819
MroI TCCGGA 1 cut(s) 1434
MroNI GCCGGC 1 cut(s) 142
MscI TGGCCA 1 cut(s) 1235
Msp20I TGGCCA 1 cut(s) 1235
MspA1I CMGCKG 4 cut(s) 965, 1160, 1316, 1880
MspI CCGG 6 cut(s) 143, 210, 253, 597, 1435, 1463
MspR9I CCNGG 5 cut(s) 192, 253, 1224, 1237, 1463
Mva1269I GAATGC 1 cut(s) 1856
MvaI CCWGG 3 cut(s) 192, 1224, 1237
MvnI CGCG 2 cut(s) 1038, 1953
NaeI GCCGGC 1 cut(s) 144
NciI CCSGG 2 cut(s) 253, 1463
NdeI CATATG 1 cut(s) 904
NdeII GATC 6 cut(s) 582, 1039, 1057, 1726, 1954, 1972
NgoMIV GCCGGC 1 cut(s) 142
NheI GCTAGC 1 cut(s) 146
NlaIII CATG 5 cut(s) 883, 972, 1234, 1733, 1887
NlaIV GGNNCC 5 cut(s) 127, 196, 454, 1207, 1461
NmuCI GTSAC 2 cut(s) 392, 1184
NruI TCGCGA 2 cut(s) 1038, 1953
NsiI ATGCAT 1 cut(s) 1819
NspI RCATGY 2 cut(s) 972, 1887
NspV TTCGAA 2 cut(s) 1530, 1946
PciSI GCTCTTC 1 cut(s) 795
PctI GAATGC 1 cut(s) 1856
PdiI GCCGGC 1 cut(s) 144
PfeI GAWTC 7 cut(s) 107, 575, 685, 1033, 1260, 1600, 1948
PleI GAGTC 2 cut(s) 691, 1181
PpsI GAGTC 2 cut(s) 691, 1181
PshBI ATTAAT 1 cut(s) 2055
PsiI TTATAA 2 cut(s) 44, 2001
Psp6I CCWGG 3 cut(s) 190, 1222, 1235
PspGI CCWGG 3 cut(s) 190, 1222, 1235
PspN4I GGNNCC 5 cut(s) 127, 196, 454, 1207, 1461
PspOMI GGGCCC 1 cut(s) 1459
PspPI GGNCC 3 cut(s) 1459, 1460, 2033
PvuII CAGCTG 4 cut(s) 965, 1160, 1316, 1880
RruI TCGCGA 2 cut(s) 1038, 1953
RsaI GTAC 5 cut(s) 81, 887, 1164, 1587, 1802
RsaNI GTAC 5 cut(s) 80, 886, 1163, 1586, 1801
SapI GCTCTTC 1 cut(s) 795
Sau3AI GATC 6 cut(s) 582, 1039, 1057, 1726, 1954, 1972
Sau96I GGNCC 3 cut(s) 1459, 1460, 2033
ScaI AGTACT 4 cut(s) 81, 887, 1587, 1802
SchI GAGTC 2 cut(s) 691, 1181
ScrFI CCNGG 5 cut(s) 192, 253, 1224, 1237, 1463
SduI GDGCHC 1 cut(s) 1463
SfaNI GCATC 3 cut(s) 738, 832, 1921
SfcI CTRYAG 2 cut(s) 1108, 1537
SfuI TTCGAA 2 cut(s) 1530, 1946
SinI GGWCC 1 cut(s) 2033
SsiI CCGC 2 cut(s) 1449, 1704
SspI AATATT 1 cut(s) 442
SspMI CTAG 4 cut(s) 26, 147, 1181, 1403
StyD4I CCNGG 5 cut(s) 190, 251, 1222, 1235, 1461
StyI CCWWGG 1 cut(s) 1125
TaaI ACNGT 4 cut(s) 49, 236, 1112, 1550
TaiI ACGT 2 cut(s) 1481, 1616
TaqI TCGA 5 cut(s) 1060, 1263, 1530, 1946, 1975
TatI WGTACW 4 cut(s) 79, 885, 1585, 1800
TauI GCSGC 1 cut(s) 1707
TfiI GAWTC 7 cut(s) 107, 575, 685, 1033, 1260, 1600, 1948
TscAI CASTG 6 cut(s) 241, 1117, 1198, 1291, 1375, 1657
TseFI GTSAC 2 cut(s) 392, 1184
Tsp45I GTSAC 2 cut(s) 392, 1184
TspRI CASTG 6 cut(s) 241, 1117, 1198, 1291, 1375, 1657
VpaK11BI GGWCC 1 cut(s) 2033
VspI ATTAAT 1 cut(s) 2055
XapI RAATTY 3 cut(s) 476, 898, 1784
XceI RCATGY 2 cut(s) 972, 1887
XspI CTAG 4 cut(s) 26, 147, 1181, 1403
ZrmI AGTACT 4 cut(s) 81, 887, 1587, 1802
Zsp2I ATGCAT 1 cut(s) 1819
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.