Prupe.7G177600_v2.0.a1

Belongs to the 'GDSL' lipolytic enzyme family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000448
Physical Location & Seq
Reverse (-)
17555420 .. 17557245
1826 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G177600.1

Sequence Viewer

Length: 1104 bp
ATGGCCAAAGGGTTGAGATCAGTATTTTCTGTCTGGTTGATTGTGTTGTATCTGGGCATGCTTGGTCTGCATGAATGCTATCAGCCAAGAGTGCCAGGAGTTTATATTTTTGGTGATTCGACTGTTGATGTTGGGACCAACCATTACTTGACTGAGTCTGAGTGTAGATCAAGGGCTGATTTCCTTTATAATGGGATTGATTTTCCTCACTCTATACCAACAGGCAGATTTAGCAACGGCTTCAACATTGTTGATTATATTGCCATCTTTCTGGGTTTCAAGATGAGCCCGCCACCTTTTCTCTCTCTTTTAGACAAGAATAAGCAATTGCCCAAAAGGATGATCAGATTGCTAAGTAGGGGAGTTAACTTCGCCTCAGGAGGATCTGGAATTCTAGATGATACTGGAAAACAGTGGGGAAAGGTGATTCCCTTTGGAGAACAGGTGGAGCAATTTGCAATAGTACGCAACAAGATCTCAGAATTATTAGGTGAAGAGGGTGCAGCGGCTAATATATCCGAGTCTCTCTTCCTCATCAGCGTTGGAAGCAATGACATCTTAGAACATTTTGCTTATAACCAATCTGGACAAGCCTACATCACCACTCTCATGTCCACTTATGAAAGTCGTTTAAGGAATCTATTTGATATCGGAGCCAAAAAATTTGGGATTATTAGCGTTGCACCAATCGGGTGCATCCCGTTGATACATAGTGTTACTCAAACTAGGGATTGTTTTGGGCCCATGAATGAGCATGCTCAATTGTTCTACAAGGCACTGCATGACATGTTGCTTAAGTTAAGCTCAGAATGCAAAGGGATGATGTATGCTCTTGCAGATGCTTATAATATGACCACACCCATTCTCGAAAACCCTCAGAAATTTGGTTTTAATGAGGTGACAAAAGCTTGCTGCGGAAAAGGAAATTTCAATGCTGAGGAGCCATGTACACCAAACGCGAAAGTGTGTAAATATCACAACGAGTACTTGTTCTGGGACCAATATCATCCAACACAAGCTGCGTCTTATCTTGCAGCTCTAGCTGTTTTTGGTAATCATGAGTTTGTGGTACCCATCACTTTTGGTCAATTGGTATCTCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lipase_GDSL

Protein Analysis

368

Amino Acids

40.82

Weight (kDa)

6.36

Isoelectric Point (pI)

41.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000448)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g10790 FvH4_1g10790 FvH4_1g10790 FvH4_1g10791 FvH4_1g10800 FvH4_2g15970 FvH4_2g15980 FvH4_2g15990
malus_domestica MD02G1121900.v1.1 MD05G1128700.v1.1 MD10G1131900.v1.1 MD15G1235500.v1.1 MD15G1235600.v1.1
prunus_persica Prupe.7G177500_v2.0.a1 Prupe.7G177600_v2.0.a1 Prupe.8G172800_v2.0.a1
pyrus_communis pycom05g12460 pycom05g12470 pycom10g11300
rosa_chinensis RchiOBHm_Chr2g0097971 RchiOBHm_Chr2g0098021 RchiOBHm_Chr2g0098061 RchiOBHm_Chr6g0257301 RchiOBHm_Chr6g0279511 RchiOBHm_Chr6g0279521
rosa_laevigata RLG00000013139 RLG00000013140 RLG00000013141 RLG00000016747 RLG00000016749 RLG00000016750 RLG00000016751 RLG00000016752
rosa_multiflora Rmu_sc0002648.1_g000005 Rmu_sc0002648.1_g000006 Rmu_sc0004649.1_g000019 Rmu_sc0004649.1_g000021 Rmu_sc0009572.1_g000002 Rmu_sc0013919.1_g000008 Rmu_sc0013919.1_g000009
rosa_roxburghii Rroxscaffold_2G00144370 Rroxscaffold_2G00144380 Rroxscaffold_2G00144390 Rroxscaffold_2G00144410 Rroxscaffold_4G00294600 Rroxscaffold_7G00188840 Rroxscaffold_7G00188850 Rroxscaffold_7G00188860
rosa_rugosa Rorug02G0069400 Rorug02G0069600 Rorug02G0069700 Rorug02G0069800 Rorug06G0098000.1 Rorug06G0125000 Rorug06G0125100 Rorug06G0125200
rosa_samantha Rh2AG116400 Rh2AG116800 Rh2AG116900 Rh2AG117000 Rh2BG119300 Rh2BG119500 Rh2BG119600 Rh2BG119700 Rh2BG119800 Rh2CG120900 Rh2CG121000 Rh2CG121200 Rh2CG121300 Rh2CG121400 Rh2CG121500 Rh2DG120600 Rh2DG121100 Rh2DG121200 Rh2DG121500 Rh6AG091200 Rh6AG234100 Rh6BG238400 Rh6BG238500 Rh6BG238600 Rh6CG078800 Rh6CG240400 Rh6CG240500 Rh6CG240600 Rh6DG074600 Rh6DG232000 Rh6DG232100
rosa_wichuraiana Rw2G009120 Rw2G009130 Rw2G009140 Rw6G020420 Rw6G020430 Rw6G020440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 189, 576, 846
Acc65I GGTACC 1 cut(s) 1069
AccB1I GGYRCC 1 cut(s) 1069
AccII CGCG 1 cut(s) 959
AciI CCGC 3 cut(s) 290, 506, 915
AclWI GGATC 1 cut(s) 391
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 4 cut(s) 390, 662, 881, 925
AfaI GTAC 4 cut(s) 465, 949, 986, 1071
AflII CTTAAG 1 cut(s) 794
AflIII ACRYGT 1 cut(s) 786
AgsI TTSAA 3 cut(s) 244, 280, 931
AjnI CCWGG 1 cut(s) 94
AluBI AGCT 5 cut(s) 804, 908, 1019, 1037, 1043
AluI AGCT 5 cut(s) 804, 908, 1019, 1037, 1043
Alw26I GTCTC 1 cut(s) 528
AlwI GGATC 1 cut(s) 391
AoxI GGCC 2 cut(s) 3, 740
ApaI GGGCCC 1 cut(s) 744
ApeKI GCWGC 4 cut(s) 503, 912, 1019, 1034
ApoI RAATTY 4 cut(s) 390, 662, 881, 925
Asp718I GGTACC 1 cut(s) 1069
AspS9I GGNCC 4 cut(s) 135, 740, 741, 997
AsuHPI GGTGA 5 cut(s) 125, 436, 503, 592, 910
AvaII GGWCC 2 cut(s) 135, 997
AxyI CCTNAGG 1 cut(s) 376
BaeGI GKGCMC 1 cut(s) 744
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 1 cut(s) 1069
BanII GRGCYC 2 cut(s) 290, 744
BbvCI CCTCAGC 1 cut(s) 936
BbvI GCAGC 4 cut(s) 515, 899, 1006, 1046
BccI CCATC 2 cut(s) 272, 1082
BceAI ACGGC 1 cut(s) 253
BciT130I CCWGG 1 cut(s) 96
BclI TGATCA 1 cut(s) 342
BcoDI GTCTC 1 cut(s) 528
BfaI CTAG 3 cut(s) 395, 726, 1040
BfrI CTTAAG 1 cut(s) 794
BglII AGATCT 1 cut(s) 474
BisI GCNGC 5 cut(s) 504, 507, 913, 1020, 1035
BlsI GCNGC 5 cut(s) 505, 508, 914, 1021, 1036
BmcAI AGTACT 1 cut(s) 986
Bme1390I CCNGG 1 cut(s) 96
Bme18I GGWCC 2 cut(s) 135, 997
BmgT120I GGNCC 4 cut(s) 135, 740, 741, 997
BmiI GGNNCC 6 cut(s) 136, 655, 742, 942, 998, 1071
BmrFI CCNGG 1 cut(s) 96
BmsI GCATC 2 cut(s) 705, 829
Bpu10I CCTNAGC 1 cut(s) 936
BsaXI ACNNNNNCTCC 2 cut(s) 429, 459
Bse1I ACTGG 1 cut(s) 409
Bse21I CCTNAGG 1 cut(s) 376
Bse3DI GCAATG 1 cut(s) 556
BseBI CCWGG 1 cut(s) 96
BseGI GGATG 4 cut(s) 345, 696, 825, 1006
BseMI GCAATG 1 cut(s) 556
BseMII CTCAG 7 cut(s) 144, 150, 390, 492, 819, 890, 927
BseNI ACTGG 1 cut(s) 409
BseRI GAGGAG 1 cut(s) 953
BseSI GKGCMC 1 cut(s) 744
BseXI GCAGC 4 cut(s) 515, 899, 1006, 1046
BsgI GTGCAG 1 cut(s) 522
Bsh1236I CGCG 1 cut(s) 959
BshFI GGCC 2 cut(s) 5, 742
BshNI GGYRCC 1 cut(s) 1069
BslFI GGGAC 2 cut(s) 148, 1010
BsmAI GTCTC 1 cut(s) 528
BsmFI GGGAC 2 cut(s) 148, 1010
BsmI GAATGC 2 cut(s) 80, 815
BsnI GGCC 2 cut(s) 5, 742
Bsp120I GGGCCC 1 cut(s) 740
Bsp1286I GDGCHC 2 cut(s) 290, 744
Bsp1407I TGTACA 1 cut(s) 947
Bsp143I GATC 5 cut(s) 17, 167, 342, 383, 474
BspACI CCGC 3 cut(s) 290, 506, 915
BspANI GGCC 2 cut(s) 5, 742
BspCNI CTCAG 7 cut(s) 145, 151, 389, 491, 818, 889, 928
BspFNI CGCG 1 cut(s) 959
BspHI TCATGA 1 cut(s) 1057
BspLI GGNNCC 6 cut(s) 136, 655, 742, 942, 998, 1071
BspPI GGATC 1 cut(s) 391
BspT107I GGYRCC 1 cut(s) 1069
BspTI CTTAAG 1 cut(s) 794
BsrDI GCAATG 1 cut(s) 556
BsrGI TGTACA 1 cut(s) 947
BsrI ACTGG 1 cut(s) 409
BssMI GATC 5 cut(s) 17, 167, 342, 383, 474
Bst2UI CCWGG 1 cut(s) 96
Bst4CI ACNGT 2 cut(s) 124, 414
Bst6I CTCTTC 2 cut(s) 489, 533
BstAFI CTTAAG 1 cut(s) 794
BstAUI TGTACA 1 cut(s) 947
BstC8I GCNNGC 4 cut(s) 59, 290, 756, 910
BstDEI CTNAG 9 cut(s) 153, 159, 353, 376, 478, 559, 805, 876, 936
BstF5I GGATG 4 cut(s) 345, 696, 825, 1006
BstFNI CGCG 1 cut(s) 959
BstKTI GATC 5 cut(s) 20, 170, 345, 386, 477
BstMAI GTCTC 1 cut(s) 528
BstMBI GATC 5 cut(s) 17, 167, 342, 383, 474
BstMWI GCNNNNNNNGC 6 cut(s) 67, 91, 231, 546, 810, 1040
BstNI CCWGG 1 cut(s) 96
BstNSI RCATGY 3 cut(s) 61, 758, 790
BstSCI CCNGG 1 cut(s) 94
BstSLI GKGCMC 1 cut(s) 744
BstUI CGCG 1 cut(s) 959
BstV1I GCAGC 4 cut(s) 515, 899, 1006, 1046
BstX2I RGATCY 2 cut(s) 383, 474
BstXI CCANNNNNNTGG 1 cut(s) 271
BstYI RGATCY 2 cut(s) 383, 474
Bsu36I CCTNAGG 1 cut(s) 376
BsuRI GGCC 2 cut(s) 5, 742
BtsCI GGATG 4 cut(s) 345, 696, 825, 1006
BtsI GCAGTG 1 cut(s) 776
BtsIMutI CAGTG 2 cut(s) 419, 776
Cac8I GCNNGC 4 cut(s) 59, 290, 756, 910
CciI TCATGA 1 cut(s) 1057
Cfr13I GGNCC 4 cut(s) 135, 740, 741, 997
CseI GACGC 1 cut(s) 1011
Csp6I GTAC 4 cut(s) 464, 948, 985, 1070
CviQI GTAC 4 cut(s) 464, 948, 985, 1070
DdeI CTNAG 9 cut(s) 153, 159, 353, 376, 478, 559, 805, 876, 936
DpnI GATC 5 cut(s) 19, 169, 344, 385, 476
DpnII GATC 5 cut(s) 17, 167, 342, 383, 474
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 2 cut(s) 489, 533
EarI CTCTTC 2 cut(s) 489, 533
Eco24I GRGCYC 2 cut(s) 290, 744
Eco32I GATATC 1 cut(s) 649
Eco47I GGWCC 2 cut(s) 135, 997
Eco81I CCTNAGG 1 cut(s) 376
EcoRI GAATTC 1 cut(s) 390
EcoRII CCWGG 1 cut(s) 94
EcoRV GATATC 1 cut(s) 649
EcoT38I GRGCYC 2 cut(s) 290, 744
FaqI GGGAC 2 cut(s) 148, 1010
FauI CCCGC 1 cut(s) 297
FbaI TGATCA 1 cut(s) 342
Fnu4HI GCNGC 5 cut(s) 504, 507, 913, 1020, 1035
FokI GGATG 4 cut(s) 352, 683, 832, 993
FriOI GRGCYC 2 cut(s) 290, 744
Fsp4HI GCNGC 5 cut(s) 504, 507, 913, 1020, 1035
FspBI CTAG 3 cut(s) 395, 726, 1040
GluI GCNGC 5 cut(s) 504, 507, 913, 1020, 1035
HaeIII GGCC 2 cut(s) 5, 742
HgaI GACGC 1 cut(s) 1011
HincII GTYRAC 1 cut(s) 367
HindII GTYRAC 1 cut(s) 367
HindIII AAGCTT 1 cut(s) 906
HinfI GANTC 5 cut(s) 116, 155, 427, 521, 637
HpaI GTTAAC 1 cut(s) 367
HphI GGTGA 5 cut(s) 125, 436, 503, 592, 910
Hpy166II GTNNAC 3 cut(s) 367, 615, 950
Hpy188I TCNGA 7 cut(s) 160, 347, 481, 520, 653, 808, 879
Hpy188III TCNNGA 7 cut(s) 280, 378, 387, 395, 585, 866, 1058
Hpy8I GTNNAC 3 cut(s) 367, 615, 950
HpyCH4III ACNGT 2 cut(s) 124, 414
HpyCH4V TGCA 9 cut(s) 70, 458, 503, 683, 696, 781, 813, 836, 1034
HpyF10VI GCNNNNNNNGC 6 cut(s) 67, 91, 231, 546, 810, 1040
HpyF3I CTNAG 9 cut(s) 153, 159, 353, 376, 478, 559, 805, 876, 936
KpnI GGTACC 1 cut(s) 1073
Ksp22I TGATCA 1 cut(s) 342
KspAI GTTAAC 1 cut(s) 367
Kzo9I GATC 5 cut(s) 17, 167, 342, 383, 474
LmnI GCTCC 3 cut(s) 448, 653, 940
Lsp1109I GCAGC 4 cut(s) 515, 899, 1006, 1046
LweI GCATC 2 cut(s) 705, 829
MaeI CTAG 3 cut(s) 395, 726, 1040
MaeIII GTNAC 2 cut(s) 715, 898
MalI GATC 5 cut(s) 19, 169, 344, 385, 476
MboI GATC 5 cut(s) 17, 167, 342, 383, 474
MboII GAAGA 2 cut(s) 506, 520
MfeI CAATTG 3 cut(s) 326, 761, 1088
MflI RGATCY 2 cut(s) 383, 474
MhlI GDGCHC 2 cut(s) 290, 744
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 9 cut(s) 326, 390, 452, 482, 662, 761, 881, 925, 1088
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 2 cut(s) 164, 530
MmeI TCCRAC 2 cut(s) 523, 1034
MnlI CCTC 8 cut(s) 216, 374, 385, 490, 542, 885, 889, 931
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 5 cut(s) 366, 632, 795, 800, 891
MslI CAYNNNNRTG 1 cut(s) 608
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 506
MspCI CTTAAG 1 cut(s) 794
MspR9I CCNGG 1 cut(s) 96
MunI CAATTG 3 cut(s) 326, 761, 1088
Mva1269I GAATGC 2 cut(s) 80, 815
MvaI CCWGG 1 cut(s) 96
MvnI CGCG 1 cut(s) 959
MwoI GCNNNNNNNGC 6 cut(s) 67, 91, 231, 546, 810, 1040
NdeII GATC 5 cut(s) 17, 167, 342, 383, 474
NlaIV GGNNCC 6 cut(s) 136, 655, 742, 942, 998, 1071
NmuCI GTSAC 1 cut(s) 898
NspI RCATGY 3 cut(s) 61, 758, 790
PaeI GCATGC 2 cut(s) 61, 758
PagI TCATGA 1 cut(s) 1057
PciI ACATGT 1 cut(s) 786
PctI GAATGC 2 cut(s) 80, 815
PfeI GAWTC 3 cut(s) 116, 427, 637
PflFI GACNNNGTC 1 cut(s) 154
PkrI GCNGC 5 cut(s) 505, 508, 914, 1021, 1036
PleI GAGTC 2 cut(s) 163, 529
PpsI GAGTC 2 cut(s) 163, 529
PscI ACATGT 1 cut(s) 786
PsiI TTATAA 3 cut(s) 189, 576, 846
Psp6I CCWGG 1 cut(s) 94
PspGI CCWGG 1 cut(s) 94
PspN4I GGNNCC 6 cut(s) 136, 655, 742, 942, 998, 1071
PspOMI GGGCCC 1 cut(s) 740
PspPI GGNCC 4 cut(s) 135, 740, 741, 997
PsuI RGATCY 2 cut(s) 383, 474
PsyI GACNNNGTC 1 cut(s) 154
RsaI GTAC 4 cut(s) 465, 949, 986, 1071
RsaNI GTAC 4 cut(s) 464, 948, 985, 1070
RseI CAYNNNNRTG 1 cut(s) 608
SaqAI TTAA 5 cut(s) 366, 632, 795, 800, 891
SatI GCNGC 5 cut(s) 504, 507, 913, 1020, 1035
Sau3AI GATC 5 cut(s) 17, 167, 342, 383, 474
Sau96I GGNCC 4 cut(s) 135, 740, 741, 997
ScaI AGTACT 1 cut(s) 986
SchI GAGTC 2 cut(s) 164, 530
ScrFI CCNGG 1 cut(s) 96
SduI GDGCHC 2 cut(s) 290, 744
SfaNI GCATC 2 cut(s) 705, 829
SinI GGWCC 2 cut(s) 135, 997
SmiMI CAYNNNNRTG 1 cut(s) 608
SmlI CTYRAG 1 cut(s) 794
SmoI CTYRAG 1 cut(s) 794
SphI GCATGC 2 cut(s) 61, 758
Sse9I AATT 9 cut(s) 326, 390, 452, 482, 662, 761, 881, 925, 1088
SsiI CCGC 3 cut(s) 290, 506, 915
SspMI CTAG 3 cut(s) 395, 726, 1040
StyD4I CCNGG 1 cut(s) 94
TaaI ACNGT 2 cut(s) 124, 414
TaqI TCGA 2 cut(s) 119, 867
TasI AATT 9 cut(s) 326, 390, 452, 482, 662, 761, 881, 925, 1088
TatI WGTACW 2 cut(s) 947, 984
TauI GCSGC 1 cut(s) 509
TfiI GAWTC 3 cut(s) 116, 427, 637
Tru1I TTAA 5 cut(s) 366, 632, 795, 800, 891
Tru9I TTAA 5 cut(s) 366, 632, 795, 800, 891
TscAI CASTG 2 cut(s) 419, 783
TseFI GTSAC 1 cut(s) 898
TseI GCWGC 4 cut(s) 503, 912, 1019, 1034
Tsp45I GTSAC 1 cut(s) 898
TspDTI ATGAA 3 cut(s) 87, 636, 761
TspRI CASTG 2 cut(s) 419, 783
Tth111I GACNNNGTC 1 cut(s) 154
Vha464I CTTAAG 1 cut(s) 794
VpaK11BI GGWCC 2 cut(s) 135, 997
XapI RAATTY 4 cut(s) 390, 662, 881, 925
XbaI TCTAGA 1 cut(s) 394
XceI RCATGY 3 cut(s) 61, 758, 790
XspI CTAG 3 cut(s) 395, 726, 1040
ZrmI AGTACT 1 cut(s) 986
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.