Prupe.8G195800_v2.0.a1

quinone-oxidoreductase homolog, chloroplastic

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
18779315 .. 18781679
2365 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G195800.2

Sequence Viewer

Length: 1002 bp
ATGGCAGCAGCCATGGCGTCGAAGCTTATGCATGCGGTTCAGTACGACAGCTACGGTGGAGGAGCTTCTGGTTTAAAGCATGCGGAGGTTCCAGTCCCCACTCCAAAGAAAGGTGATATCTTGCTGAAATTGGAAGCTGCTAGTTTAAACCCAGTTGATTGGAAAATTCAGAAAGGCATGTTTCGGCCTCTTTTGCCACGCAAATTCCCTCATATACCTGTTACTGATGTTGCTGGAGAGGTTGTAGAAGTTGGACAAGGGGTCCAAAAGTTCAAACCGGGCGACAAAGTTGTGGCATTTCTCACCCACACTAATGGAGGTGGACTAGCTGAATTTGCTGCAGCTAGTGAGAGCTTGACAGTTGCCAGGCCACCTGAAGTTTCAGCGGCTGATGGTGCAGGCTTACCTGTTGCTGGTCTCACAGCTCACCAGGCTCTCACCCAAGCTGCAGGGGTCAAGCTTGACGGATCTGGCCAGCAAAAGAACATATTGATTACTGCTGCCTCTGGTGGTGTGGGTCAGTATGCAGTCCAACTAGCAAAGCTCGGAAACACTCATGTTACAGCCACGTGCAGTGCTCGTAACATCGAATTTGTCAAGAGCTTGGGGGCAGATGAGGTTCTCGACTACAAGACCCCAGAAGGAGCAGCTCTGAATAGTCCATCTGGTAGGAAATATGATGCTGTGGTCCATTGTGCTACGGGCATTCCCTGGTCAACTTTCGAGCCTAATTTGAGCGCCAACGGGAAGGTTATAGACCTTACTCCTAGTCCAAGTGCCTTTGCTACTTTTGCTCTGAAGAAACTCACCTTCTCCAAGAAGCAGCTGGTGCCACTGTTCATGAGTGCCAAGAGTGAGAACCTTGATTATCTTGTCAAGTTAGTGAAGGAAGGAAAGCTCAAGACTGTGATCGACTCGAAGCATCCTCTGAGCAAGGCTGAAGATGGTTGGGCTAAGAGTATTGATGGACATGCAACTGGGAAGATAATTGTGGAGCCTTAA

Protein Analysis

334

Amino Acids

34.82

Weight (kDa)

9.07

Isoelectric Point (pI)

29.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000313)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G13010
fragaria_vesca FvH4_2g18240 FvH4_2g18280 FvH4_2g18310 FvH4_2g18320 FvH4_2g18330 FvH4_2g18340 FvH4_2g18350
malus_domestica MD05G1166800.v1.1 MD05G1167200.v1.1 MD05G1167300.v1.1 MD05G1167400.v1.1 MD05G1167600.v1.1 MD05G1168000.v1.1 MD05G1168200.v1.1 MD05G1168400.v1.1 MD05G1168600.v1.1 MD05G1168700.v1.1 MD05G1168800.v1.1 MD10G1156900.v1.1 MD10G1157000.v1.1 MD10G1157100.v1.1 MD10G1157200.v1.1
prunus_persica Prupe.8G195100_v2.0.a1 Prupe.8G195100_v2.0.a1 Prupe.8G195300_v2.0.a1 Prupe.8G195600_v2.0.a1 Prupe.8G195700_v2.0.a1 Prupe.8G195700_v2.0.a1 Prupe.8G195800_v2.0.a1 Prupe.8G195800_v2.0.a1 Prupe.8G195900_v2.0.a1 Prupe.8G195900_v2.0.a1 Prupe.8G195900_v2.0.a1 Prupe.8G195900_v2.0.a1 Prupe.8G196000_v2.0.a1 Prupe.8G196000_v2.0.a1
pyrus_communis pycom05g15560 pycom05g15600 pycom05g15610 pycom05g15620 pycom05g15630 pycom10g13550 pycom10g13570
rosa_chinensis RchiOBHm_Chr6g0283611 RchiOBHm_Chr6g0283631 RchiOBHm_Chr6g0283641 RchiOBHm_Chr6g0283661 RchiOBHm_Chr6g0283681 RchiOBHm_Chr6g0283691 RchiOBHm_Chr6g0283701 RchiOBHm_Chr6g0283711 RchiOBHm_Chr6g0283721
rosa_laevigata RLG00000012804 RLG00000012807 RLG00000012811
rosa_multiflora Rmu_co8263921.1_g000001 Rmu_sc0001521.1_g000009 Rmu_sc0002906.1_g000002 Rmu_sc0002906.1_g000011 Rmu_sc0002906.1_g000013 Rmu_sc0005719.1_g000016 Rmu_sc0005719.1_g000022 Rmu_sc0029460.1_g000001
rosa_roxburghii Rroxscaffold_7G00185240 Rroxscaffold_7G00185250 Rroxscaffold_7G00185270 Rroxscaffold_7G00185280 Rroxscaffold_7G00185290 Rroxscaffold_7G00185330 Rroxscaffold_7G00185350
rosa_rugosa Rorug06G0156100 Rorug06G0156300 Rorug06G0156400 Rorug06G0156500 Rorug06G0156600 Rorug06G0156700 Rorug06G0156800 Rorug06G0156900 Rorug06G0157000
rosa_samantha Rh6AG267900 Rh6AG268100 Rh6AG268200 Rh6AG268400 Rh6AG268600 Rh6AG268700 Rh6AG268900 Rh6AG269100 Rh6BG270700 Rh6BG270900 Rh6BG271000 Rh6BG271200 Rh6BG271400 Rh6BG271500 Rh6CG270200 Rh6CG270400 Rh6CG270500 Rh6CG270800 Rh6CG270900 Rh6CG271000 Rh6CG271100 Rh6CG271300 Rh6DG263900 Rh6DG264100 Rh6DG264200 Rh6DG264400 Rh6DG264600 Rh6DG264800 Rh6DG265200
rosa_wichuraiana Rw6G023210 Rw6G023220 Rw6G023230 Rw6G023240 Rw6G023250 Rw6G023260 Rw6G023270 Rw6G023280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 829
AciI CCGC 3 cut(s) 35, 83, 386
AclWI GGATC 1 cut(s) 475
AcoI YGGCCR 1 cut(s) 472
AcsI RAATTY 4 cut(s) 165, 203, 332, 590
AcuI CTGAAG 3 cut(s) 396, 818, 960
AcvI CACGTG 1 cut(s) 570
AcyI GRCGYC 1 cut(s) 17
AfaI GTAC 1 cut(s) 44
AfiI CCNNNNNNNGG 2 cut(s) 110, 413
AgsI TTSAA 1 cut(s) 274
AhdI GACNNNNNGTC 1 cut(s) 260
AjnI CCWGG 3 cut(s) 365, 429, 710
Alw21I GWGCWC 1 cut(s) 580
Alw26I GTCTC 1 cut(s) 422
AlwI GGATC 1 cut(s) 475
AlwNI CAGNNNCTG 1 cut(s) 389
AoxI GGCC 3 cut(s) 185, 368, 472
ApeKI GCWGC 9 cut(s) 5, 8, 137, 338, 341, 446, 500, 647, 823
ApoI RAATTY 4 cut(s) 165, 203, 332, 590
AspLEI GCGC 1 cut(s) 740
AspS9I GGNCC 2 cut(s) 262, 688
AsuC2I CCSGG 1 cut(s) 279
AsuHPI GGTGA 5 cut(s) 125, 295, 419, 430, 799
AvaII GGWCC 2 cut(s) 262, 688
BalI TGGCCA 1 cut(s) 474
BanI GGYRCC 1 cut(s) 829
BbrPI CACGTG 1 cut(s) 570
Bbv12I GWGCWC 1 cut(s) 580
BbvI GCAGC 9 cut(s) 17, 20, 124, 325, 353, 433, 487, 659, 835
BccI CCATC 4 cut(s) 386, 670, 938, 959
BcgI CGANNNNNNTGC 2 cut(s) 10, 44
BciT130I CCWGG 3 cut(s) 367, 431, 712
BcnI CCSGG 1 cut(s) 279
BcoDI GTCTC 1 cut(s) 422
BfaI CTAG 5 cut(s) 141, 326, 345, 536, 768
BfmI CTRYAG 2 cut(s) 339, 447
BfoI RGCGCY 1 cut(s) 741
Bme1390I CCNGG 4 cut(s) 279, 367, 431, 712
Bme18I GGWCC 2 cut(s) 262, 688
BmeRI GACNNNNNGTC 1 cut(s) 260
BmgT120I GGNCC 2 cut(s) 262, 688
BmiI GGNNCC 4 cut(s) 90, 263, 831, 996
BmrFI CCNGG 4 cut(s) 279, 367, 431, 712
BmrI ACTGGG 2 cut(s) 146, 987
BmsI GCATC 2 cut(s) 670, 931
BmuI ACTGGG 2 cut(s) 146, 987
BpmI CTGGAG 1 cut(s) 255
BpuEI CTTGAG 1 cut(s) 884
BpuMI CCSGG 1 cut(s) 279
BsaAI YACGTR 1 cut(s) 570
BsaHI GRCGYC 1 cut(s) 17
BsaI GGTCTC 1 cut(s) 422
BsaJI CCNNGG 2 cut(s) 12, 710
BsaXI ACNNNNNCTCC 2 cut(s) 228, 258
Bsc4I CCNNNNNNNGG 2 cut(s) 110, 413
Bse1I ACTGG 3 cut(s) 92, 152, 982
BseBI CCWGG 3 cut(s) 367, 431, 712
BseDI CCNNGG 2 cut(s) 12, 710
BseGI GGATG 1 cut(s) 922
BseLI CCNNNNNNNGG 2 cut(s) 110, 413
BseMII CTCAG 1 cut(s) 920
BseNI ACTGG 3 cut(s) 92, 152, 982
BseRI GAGGAG 1 cut(s) 75
BseXI GCAGC 9 cut(s) 17, 20, 124, 325, 353, 433, 487, 659, 835
BsgI GTGCAG 2 cut(s) 417, 592
BshFI GGCC 3 cut(s) 187, 370, 474
BshNI GGYRCC 1 cut(s) 829
BsiHKAI GWGCWC 1 cut(s) 580
BsiSI CCGG 1 cut(s) 278
BslFI GGGAC 1 cut(s) 80
BslI CCNNNNNNNGG 2 cut(s) 110, 413
BsmAI GTCTC 1 cut(s) 422
BsmFI GGGAC 1 cut(s) 80
BsmI GAATGC 1 cut(s) 705
BsnI GGCC 3 cut(s) 187, 370, 474
Bso31I GGTCTC 1 cut(s) 422
Bsp1286I GDGCHC 1 cut(s) 580
Bsp143I GATC 2 cut(s) 467, 909
Bsp19I CCATGG 1 cut(s) 12
BspACI CCGC 3 cut(s) 35, 83, 386
BspANI GGCC 3 cut(s) 187, 370, 474
BspCNI CTCAG 1 cut(s) 921
BspHI TCATGA 1 cut(s) 840
BspLI GGNNCC 4 cut(s) 90, 263, 831, 996
BspMAI CTGCAG 2 cut(s) 343, 451
BspPI GGATC 1 cut(s) 475
BspT107I GGYRCC 1 cut(s) 829
BspTNI GGTCTC 1 cut(s) 422
BsrI ACTGG 3 cut(s) 92, 152, 982
BssECI CCNNGG 2 cut(s) 12, 710
BssMI GATC 2 cut(s) 467, 909
BssNI GRCGYC 1 cut(s) 17
BssT1I CCWWGG 1 cut(s) 12
Bst2UI CCWGG 3 cut(s) 367, 431, 712
Bst4CI ACNGT 4 cut(s) 56, 361, 837, 907
BstACI GRCGYC 1 cut(s) 17
BstAPI GCANNNNNTGC 1 cut(s) 829
BstBAI YACGTR 1 cut(s) 570
BstC8I GCNNGC 4 cut(s) 33, 81, 400, 476
BstDEI CTNAG 2 cut(s) 929, 954
BstDSI CCRYGG 1 cut(s) 12
BstF5I GGATG 1 cut(s) 922
BstH2I RGCGCY 1 cut(s) 741
BstHHI GCGC 1 cut(s) 740
BstKTI GATC 2 cut(s) 470, 912
BstMAI GTCTC 1 cut(s) 422
BstMBI GATC 2 cut(s) 467, 909
BstMWI GCNNNNNNNGC 7 cut(s) 14, 193, 335, 395, 431, 791, 829
BstNI CCWGG 3 cut(s) 367, 431, 712
BstNSI RCATGY 4 cut(s) 35, 83, 181, 974
BstSCI CCNGG 4 cut(s) 277, 365, 429, 710
BstSFI CTRYAG 2 cut(s) 339, 447
BstV1I GCAGC 9 cut(s) 17, 20, 124, 325, 353, 433, 487, 659, 835
BstX2I RGATCY 1 cut(s) 467
BstXI CCANNNNNNTGG 2 cut(s) 159, 314
BstYI RGATCY 1 cut(s) 467
BsuRI GGCC 3 cut(s) 187, 370, 474
BtgI CCRYGG 1 cut(s) 12
BtsCI GGATG 1 cut(s) 922
BtsI GCAGTG 1 cut(s) 580
BtsIMutI CAGTG 2 cut(s) 580, 833
Cac8I GCNNGC 4 cut(s) 33, 81, 400, 476
CaiI CAGNNNCTG 1 cut(s) 389
CciI TCATGA 1 cut(s) 840
CfoI GCGC 1 cut(s) 740
Cfr13I GGNCC 2 cut(s) 262, 688
CseI GACGC 1 cut(s) 6
Csp6I GTAC 1 cut(s) 43
CviAII CATG 7 cut(s) 13, 32, 80, 178, 557, 841, 971
CviQI GTAC 1 cut(s) 43
DdeI CTNAG 2 cut(s) 929, 954
DpnI GATC 2 cut(s) 469, 911
DpnII GATC 2 cut(s) 467, 909
DraI TTTAAA 2 cut(s) 75, 147
DriI GACNNNNNGTC 1 cut(s) 260
EaeI YGGCCR 1 cut(s) 472
Eam1105I GACNNNNNGTC 1 cut(s) 260
Eco130I CCWWGG 1 cut(s) 12
Eco31I GGTCTC 1 cut(s) 422
Eco32I GATATC 1 cut(s) 118
Eco47I GGWCC 2 cut(s) 262, 688
Eco57I CTGAAG 3 cut(s) 396, 818, 960
Eco72I CACGTG 1 cut(s) 570
EcoRII CCWGG 3 cut(s) 365, 429, 710
EcoRV GATATC 1 cut(s) 118
EcoT14I CCWWGG 1 cut(s) 12
EcoT22I ATGCAT 1 cut(s) 33
ErhI CCWWGG 1 cut(s) 12
FaeI CATG 7 cut(s) 16, 35, 83, 181, 560, 844, 974
FaqI GGGAC 1 cut(s) 80
FatI CATG 7 cut(s) 12, 31, 79, 177, 556, 840, 970
FokI GGATG 1 cut(s) 909
FspBI CTAG 5 cut(s) 141, 326, 345, 536, 768
GlaI GCGC 1 cut(s) 739
GsuI CTGGAG 1 cut(s) 255
HaeII RGCGCY 1 cut(s) 741
HaeIII GGCC 3 cut(s) 187, 370, 474
HapII CCGG 1 cut(s) 278
HgaI GACGC 1 cut(s) 6
HhaI GCGC 1 cut(s) 740
Hin1I GRCGYC 1 cut(s) 17
Hin1II CATG 7 cut(s) 16, 35, 83, 181, 560, 844, 974
Hin6I GCGC 1 cut(s) 738
HinP1I GCGC 1 cut(s) 738
HincII GTYRAC 1 cut(s) 717
HindII GTYRAC 1 cut(s) 717
HindIII AAGCTT 2 cut(s) 23, 458
HinfI GANTC 1 cut(s) 914
HpaII CCGG 1 cut(s) 278
HphI GGTGA 5 cut(s) 125, 295, 419, 430, 799
Hpy166II GTNNAC 2 cut(s) 323, 717
Hpy188I TCNGA 5 cut(s) 171, 548, 654, 798, 930
Hpy188III TCNNGA 4 cut(s) 598, 623, 841, 901
Hpy8I GTNNAC 2 cut(s) 323, 717
Hpy99I CGWCG 1 cut(s) 22
HpyAV CCTTC 5 cut(s) 635, 742, 820, 880, 884
HpyCH4III ACNGT 4 cut(s) 56, 361, 837, 907
HpyCH4IV ACGT 1 cut(s) 569
HpyCH4V TGCA 7 cut(s) 31, 341, 398, 449, 527, 573, 974
HpyF10VI GCNNNNNNNGC 7 cut(s) 14, 193, 335, 395, 431, 791, 829
HpyF3I CTNAG 2 cut(s) 929, 954
HpySE526I ACGT 1 cut(s) 569
Hsp92I GRCGYC 1 cut(s) 17
Hsp92II CATG 7 cut(s) 16, 35, 83, 181, 560, 844, 974
HspAI GCGC 1 cut(s) 738
Kzo9I GATC 2 cut(s) 467, 909
LmnI GCTCC 3 cut(s) 62, 644, 994
Lsp1109I GCAGC 9 cut(s) 17, 20, 124, 325, 353, 433, 487, 659, 835
LweI GCATC 2 cut(s) 670, 931
MaeI CTAG 5 cut(s) 141, 326, 345, 536, 768
MaeII ACGT 1 cut(s) 569
MaeIII GTNAC 3 cut(s) 220, 559, 581
MalI GATC 2 cut(s) 469, 911
MboI GATC 2 cut(s) 467, 909
MboII GAAGA 3 cut(s) 811, 953, 994
MflI RGATCY 1 cut(s) 467
MhlI GDGCHC 1 cut(s) 580
MlsI TGGCCA 1 cut(s) 474
MluCI AATT 7 cut(s) 128, 165, 203, 332, 590, 730, 987
MluNI TGGCCA 1 cut(s) 474
MlyI GAGTC 1 cut(s) 908
MmeI TCCRAC 2 cut(s) 232, 556
MnlI CCTC 9 cut(s) 53, 79, 198, 219, 232, 311, 514, 610, 936
Mox20I TGGCCA 1 cut(s) 474
Mph1103I ATGCAT 1 cut(s) 33
MscI TGGCCA 1 cut(s) 474
MseI TTAA 3 cut(s) 74, 146, 1000
MslI CAYNNNNRTG 1 cut(s) 312
Msp20I TGGCCA 1 cut(s) 474
MspA1I CMGCKG 2 cut(s) 386, 826
MspI CCGG 1 cut(s) 278
MspR9I CCNGG 4 cut(s) 279, 367, 431, 712
MssI GTTTAAAC 1 cut(s) 147
Mva1269I GAATGC 1 cut(s) 705
MvaI CCWGG 3 cut(s) 367, 431, 712
MwoI GCNNNNNNNGC 7 cut(s) 14, 193, 335, 395, 431, 791, 829
NciI CCSGG 1 cut(s) 279
NcoI CCATGG 1 cut(s) 12
NdeII GATC 2 cut(s) 467, 909
NlaIII CATG 7 cut(s) 16, 35, 83, 181, 560, 844, 974
NlaIV GGNNCC 4 cut(s) 90, 263, 831, 996
NsiI ATGCAT 1 cut(s) 33
NspI RCATGY 4 cut(s) 35, 83, 181, 974
PaeI GCATGC 2 cut(s) 35, 83
PagI TCATGA 1 cut(s) 840
PctI GAATGC 1 cut(s) 705
PleI GAGTC 1 cut(s) 908
PmaCI CACGTG 1 cut(s) 570
PmeI GTTTAAAC 1 cut(s) 147
PmlI CACGTG 1 cut(s) 570
PpsI GAGTC 1 cut(s) 908
Ppu21I YACGTR 1 cut(s) 570
Psp6I CCWGG 3 cut(s) 365, 429, 710
PspCI CACGTG 1 cut(s) 570
PspGI CCWGG 3 cut(s) 365, 429, 710
PspN4I GGNNCC 4 cut(s) 90, 263, 831, 996
PspPI GGNCC 2 cut(s) 262, 688
PstI CTGCAG 2 cut(s) 343, 451
PstNI CAGNNNCTG 1 cut(s) 389
PsuI RGATCY 1 cut(s) 467
PvuII CAGCTG 1 cut(s) 826
RsaI GTAC 1 cut(s) 44
RsaNI GTAC 1 cut(s) 43
RseI CAYNNNNRTG 1 cut(s) 312
SaqAI TTAA 3 cut(s) 74, 146, 1000
Sau3AI GATC 2 cut(s) 467, 909
Sau96I GGNCC 2 cut(s) 262, 688
SchI GAGTC 1 cut(s) 908
ScrFI CCNGG 4 cut(s) 279, 367, 431, 712
SduI GDGCHC 1 cut(s) 580
SfaNI GCATC 2 cut(s) 670, 931
SfcI CTRYAG 2 cut(s) 339, 447
SinI GGWCC 2 cut(s) 262, 688
SmiMI CAYNNNNRTG 1 cut(s) 312
SmlI CTYRAG 1 cut(s) 899
SmoI CTYRAG 1 cut(s) 899
SphI GCATGC 2 cut(s) 35, 83
Sse9I AATT 7 cut(s) 128, 165, 203, 332, 590, 730, 987
SsiI CCGC 3 cut(s) 35, 83, 386
SspMI CTAG 5 cut(s) 141, 326, 345, 536, 768
StyD4I CCNGG 4 cut(s) 277, 365, 429, 710
StyI CCWWGG 1 cut(s) 12
TaaI ACNGT 4 cut(s) 56, 361, 837, 907
TaiI ACGT 1 cut(s) 572
TaqI TCGA 6 cut(s) 20, 588, 624, 723, 912, 917
TasI AATT 7 cut(s) 128, 165, 203, 332, 590, 730, 987
TauI GCSGC 1 cut(s) 389
Tru1I TTAA 3 cut(s) 74, 146, 1000
Tru9I TTAA 3 cut(s) 74, 146, 1000
TscAI CASTG 2 cut(s) 580, 840
TseI GCWGC 9 cut(s) 5, 8, 137, 338, 341, 446, 500, 647, 823
TspDTI ATGAA 1 cut(s) 829
TspGWI ACGGA 1 cut(s) 480
TspRI CASTG 2 cut(s) 580, 840
VpaK11BI GGWCC 2 cut(s) 262, 688
XapI RAATTY 4 cut(s) 165, 203, 332, 590
XceI RCATGY 4 cut(s) 35, 83, 181, 974
XcmI CCANNNNNNNNNTGG 1 cut(s) 823
XspI CTAG 5 cut(s) 141, 326, 345, 536, 768
Zsp2I ATGCAT 1 cut(s) 33
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.