pycom05g15160

Potassium channel

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
18669228 .. 18670464
1237 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g15160.3

Sequence Viewer

Length: 1059 bp
ATGGGTGTGGTGCGTGTTGTGGTACTAGTTCTTGCATTCGGAATTGGGATGATTGCTCACTTTAGTCAGGTTAAGGGTAGTGTTAAGAAGGGATTCCGGGGCTTTGTCCAGTCTCTATATTTTGTTGTTGTTACTATAACAACAATAGGATATGGAGACTACTTTCCCAATACGAGTACCTCGAAGTGGTTAATGGTATTAGTCTCAGTGGTTTTGGCAAATCCAAGTATGTGTATTATTGATAAAATCATAGGCAAGCTCATATCTAGGATTGTTTCCAAGAGTAGATTTTATCAGAGGCCTAGGCAGTATCAGATCGGTTCGACGACATTTTGTACGTTTATCCTAGTGGTAATTATAGGGCCTGCAGTAATACACCTATTGGAGGTGAAGCAGATGAATTATGCAGAGGTGTATTACTTTAACGCTATATCGTTGATGACGGTTGGGTACGGCGATTTTGCGTTCAAATCTACCGGTGGACAGCTTTTCACTTCGTTTTATCTGCTATTTGGACCACTGCTGGTAGTCCGATATTTGGAGTTCGTGGTTTGCTCTTTTCTCCGACAGTGGACGGGACCAACCTTAGAACAACAGTTACAAGAAGACAAGGCAGCTATAGCAGTTGGTCAAGCTCTTCCAGTGGCAGTAGAGATAAGAAACCAACCAGGAGTAACACAAGATGTGCTGTCAAAAGTAACGGAAGCATCGGAAAGGACTGTGGCATCACAACGACAGACACAAGAATTGATTCAAGCATTGAAGAGAACCCAAGGGGCACAAGAACGACTACGTACTGCCTACAATGGTCACGGACGGTTCACAAGGGACCTAGTCTATGAGCTTCAGAACAACAAGGAGCTGATCGAAACCCACATGGAAGGTAGAGATCCGAGGATGTCTTCTACTGTACACGAATTCTCAACTTGCTCAGCCATTGTGAAAGGAAGGTTTCCATGGCAAGTTCTTGCAGAGGCAGCCCTGCAGAATCTCGATAGTTTTGCCTGTTTGTGTCTTGTCGGAGTGCATAAGTATTCTCGTAACTACTGGCATTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000325 GO:0003674 GO:0003824 GO:0004788 GO:0005215 GO:0005216 GO:0005242 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0005886 GO:0005887 GO:0006725 GO:0006732 GO:0006766 GO:0006767 GO:0006772 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006873 GO:0006875 GO:0008150 GO:0008152 GO:0008324 GO:0009058 GO:0009108 GO:0009229 GO:0009705 GO:0009987 GO:0010029 GO:0010119 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015276 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0016043 GO:0016740 GO:0016772 GO:0016778 GO:0017144 GO:0018130 GO:0019438 GO:0019637 GO:0019725 GO:0022607 GO:0022803 GO:0022832 GO:0022834 GO:0022836 GO:0022838 GO:0022839 GO:0022840 GO:0022841 GO:0022842 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0030004 GO:0030007 GO:0030322 GO:0031004 GO:0031090 GO:0031224 GO:0031226 GO:0032991 GO:0034220 GO:0034641 GO:0042357 GO:0042391 GO:0042592 GO:0042723 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044249 GO:0044271 GO:0044272 GO:0044281 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0046483 GO:0046873 GO:0048580 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0051179 GO:0051186 GO:0051188 GO:0051234 GO:0051239 GO:0051259 GO:0051260 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0055082 GO:0055085 GO:0065003 GO:0065007 GO:0065008 GO:0071704 GO:0071804 GO:0071805 GO:0071840 GO:0071944 GO:0072527 GO:0072528 GO:0090407 GO:0090533 GO:0098533 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0098796 GO:0098805 GO:0099094 GO:1900140 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1902494 GO:1902495 GO:1904949 GO:1990351 GO:2000026
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

353

Amino Acids

39.65

Weight (kDa)

9.37

Isoelectric Point (pI)

32.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000499)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02510
fragaria_vesca FvH4_6g16970 FvH4_6g16980 FvH4_7g01220 FvH4_7g01220 FvH4_7g01220 FvH4_7g01240
malus_domestica MD05G1161500.v1.1
pyrus_communis pycom05g15160
rosa_chinensis RchiOBHm_Chr1g0316711 RchiOBHm_Chr1g0316801 RchiOBHm_Chr1g0316871 RchiOBHm_Chr1g0316881 RchiOBHm_Chr1g0316951 RchiOBHm_Chr3g0470991 RchiOBHm_Chr4g0402171
rosa_laevigata RLG00000001679 RLG00000001680 RLG00000007591 RLG00000009108 RLG00000024215 RLG00000024221 RLG00000030636 RLG00000030640 RLG00000030642 RLG00000030648 RLG00000030651 RLG00000030658 RLG00000030667
rosa_multiflora Rmu_sc0000839.1_g000010 Rmu_sc0002667.1_g000003 Rmu_sc0003008.1_g000023 Rmu_sc0003008.1_g000047 Rmu_sc0005604.1_g000001 Rmu_sc0005939.1_g000001 Rmu_sc0006790.1_g000011 Rmu_sc0007472.1_g000004 Rmu_sc0017515.1_g000001 Rmu_sc0019753.1_g000003 Rmu_sc0020172.1_g000001 Rmu_sc0023783.1_g000001
rosa_roxburghii Rroxscaffold_4G00330760 Rroxscaffold_4G00330800 Rroxscaffold_4G00330810 Rroxscaffold_4G00330950
rosa_rugosa Rorug01G0011200 Rorug01G0011500 Rorug01G0011600 Rorug01G0012300 Rorug01G0012300 Rorug01G0012400 Rorug01G0012500 Rorug01G0012600 Rorug01G0012600 Rorug01G0013400 Rorug01G0013400 Rorug01G0013500
rosa_samantha Rh1AG021100 Rh1AG022800 Rh1AG023300 Rh1AG023500 Rh1AG024000 Rh1AG024300 Rh1BG016000 Rh1BG016300 Rh1BG021300 Rh1BG021500 Rh1CG020300 Rh1CG022500 Rh1DG016300 Rh1DG016400 Rh1DG017300 Rh1DG017400 Rh1DG017700 Rh1DG017800 Rh1DG018200 Rh1DG019100 Rh1DG019900 Rh1DG020200 Rh1DG020800 Rh1DG021300 Rh1DG021400 Rh1DG021800 Rh3DG186400
rosa_wichuraiana Rw1G001370 Rw1G001480 Rw1G001650 Rw1G001680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 884
AcsI RAATTY 1 cut(s) 917
AcuI CTGAAG 1 cut(s) 830
AfaI GTAC 6 cut(s) 24, 178, 337, 452, 796, 912
AfiI CCNNNNNNNGG 3 cut(s) 186, 385, 538
AgeI ACCGGT 1 cut(s) 476
AgsI TTSAA 3 cut(s) 469, 755, 763
AhlI ACTAGT 1 cut(s) 25
AjnI CCWGG 1 cut(s) 667
AluBI AGCT 6 cut(s) 259, 487, 617, 635, 844, 862
AluI AGCT 6 cut(s) 259, 487, 617, 635, 844, 862
Alw26I GTCTC 3 cut(s) 117, 150, 208
AlwI GGATC 1 cut(s) 884
AoxI GGCC 2 cut(s) 299, 362
ApeKI GCWGC 2 cut(s) 614, 977
ApoI RAATTY 1 cut(s) 917
AsiGI ACCGGT 1 cut(s) 476
Asp700I GAANNNNTTC 2 cut(s) 92, 750
AspA2I CCTAGG 1 cut(s) 302
AspS9I GGNCC 4 cut(s) 362, 515, 578, 829
AsuC2I CCSGG 1 cut(s) 98
AsuHPI GGTGA 1 cut(s) 400
AvaII GGWCC 3 cut(s) 515, 578, 829
AvrII CCTAGG 1 cut(s) 302
BaeGI GKGCMC 1 cut(s) 781
BbsI GAAGAC 2 cut(s) 612, 894
BbvI GCAGC 2 cut(s) 626, 989
BceAI ACGGC 1 cut(s) 469
BcgI CGANNNNNNTGC 2 cut(s) 983, 1017
BciT130I CCWGG 1 cut(s) 669
BcnI CCSGG 1 cut(s) 98
BcoDI GTCTC 3 cut(s) 117, 150, 208
BcuI ACTAGT 1 cut(s) 25
BfaI CTAG 5 cut(s) 26, 267, 303, 347, 833
BfmI CTRYAG 3 cut(s) 366, 618, 983
BisI GCNGC 2 cut(s) 615, 978
BlnI CCTAGG 1 cut(s) 302
BlpI GCTNAGC 1 cut(s) 931
BlsI GCNGC 2 cut(s) 616, 979
Bme1390I CCNGG 2 cut(s) 98, 669
Bme18I GGWCC 3 cut(s) 515, 578, 829
BmgT120I GGNCC 4 cut(s) 362, 515, 578, 829
BmiI GGNNCC 2 cut(s) 579, 830
BmrFI CCNGG 2 cut(s) 98, 669
BmsI GCATC 2 cut(s) 716, 734
BpiI GAAGAC 2 cut(s) 612, 894
Bpu1102I GCTNAGC 1 cut(s) 931
BpuMI CCSGG 1 cut(s) 98
BsaAI YACGTR 1 cut(s) 794
BsaJI CCNNGG 5 cut(s) 97, 302, 772, 893, 956
BsaWI WCCGGW 1 cut(s) 476
Bsc4I CCNNNNNNNGG 3 cut(s) 186, 385, 538
Bse118I RCCGGY 1 cut(s) 476
Bse1I ACTGG 3 cut(s) 109, 641, 1052
BseBI CCWGG 1 cut(s) 669
BseDI CCNNGG 5 cut(s) 97, 302, 772, 893, 956
BseGI GGATG 2 cut(s) 54, 903
BseLI CCNNNNNNNGG 3 cut(s) 186, 385, 538
BseMII CTCAG 2 cut(s) 219, 945
BseNI ACTGG 3 cut(s) 109, 641, 1052
BseSI GKGCMC 1 cut(s) 781
BseXI GCAGC 2 cut(s) 626, 989
BshFI GGCC 2 cut(s) 301, 364
BshTI ACCGGT 1 cut(s) 476
BsiSI CCGG 2 cut(s) 97, 477
BslFI GGGAC 2 cut(s) 591, 842
BslI CCNNNNNNNGG 3 cut(s) 186, 385, 538
BsmAI GTCTC 3 cut(s) 117, 150, 208
BsmFI GGGAC 2 cut(s) 591, 842
BsmI GAATGC 1 cut(s) 35
BsnI GGCC 2 cut(s) 301, 364
Bsp1286I GDGCHC 1 cut(s) 781
Bsp1407I TGTACA 1 cut(s) 910
Bsp143I GATC 3 cut(s) 315, 864, 889
Bsp1720I GCTNAGC 1 cut(s) 931
Bsp19I CCATGG 1 cut(s) 956
BspANI GGCC 2 cut(s) 301, 364
BspCNI CTCAG 2 cut(s) 218, 944
BspLI GGNNCC 2 cut(s) 579, 830
BspMAI CTGCAG 2 cut(s) 370, 987
BspPI GGATC 1 cut(s) 884
BspQI GCTCTTC 1 cut(s) 642
BsrFI RCCGGY 1 cut(s) 476
BsrGI TGTACA 1 cut(s) 910
BsrI ACTGG 3 cut(s) 109, 641, 1052
BssAI RCCGGY 1 cut(s) 476
BssECI CCNNGG 5 cut(s) 97, 302, 772, 893, 956
BssMI GATC 3 cut(s) 315, 864, 889
BssT1I CCWWGG 3 cut(s) 302, 772, 956
Bst2UI CCWGG 1 cut(s) 669
Bst4CI ACNGT 6 cut(s) 445, 570, 597, 721, 819, 910
Bst6I CTCTTC 2 cut(s) 642, 758
BstAUI TGTACA 1 cut(s) 910
BstBAI YACGTR 1 cut(s) 794
BstC8I GCNNGC 2 cut(s) 257, 366
BstDEI CTNAG 3 cut(s) 205, 586, 931
BstDSI CCRYGG 1 cut(s) 956
BstENI CCTNNNNNAGG 1 cut(s) 383
BstF5I GGATG 2 cut(s) 54, 903
BstKTI GATC 3 cut(s) 318, 867, 892
BstMAI GTCTC 3 cut(s) 117, 150, 208
BstMBI GATC 3 cut(s) 315, 864, 889
BstMWI GCNNNNNNNGC 2 cut(s) 620, 977
BstNI CCWGG 1 cut(s) 669
BstSCI CCNGG 2 cut(s) 96, 667
BstSFI CTRYAG 3 cut(s) 366, 618, 983
BstSLI GKGCMC 1 cut(s) 781
BstSNI TACGTA 1 cut(s) 794
BstV1I GCAGC 2 cut(s) 626, 989
BstV2I GAAGAC 2 cut(s) 612, 894
BstX2I RGATCY 1 cut(s) 889
BstYI RGATCY 1 cut(s) 889
BsuRI GGCC 2 cut(s) 301, 364
BtgI CCRYGG 1 cut(s) 956
BtsCI GGATG 2 cut(s) 54, 903
BtsI GCAGTG 1 cut(s) 518
BtsIMutI CAGTG 4 cut(s) 213, 518, 575, 648
Cac8I GCNNGC 2 cut(s) 257, 366
Cfr10I RCCGGY 1 cut(s) 476
Cfr13I GGNCC 4 cut(s) 362, 515, 578, 829
Csp6I GTAC 6 cut(s) 23, 177, 336, 451, 795, 911
CspAI ACCGGT 1 cut(s) 476
CviAII CATG 2 cut(s) 877, 957
CviQI GTAC 6 cut(s) 23, 177, 336, 451, 795, 911
DdeI CTNAG 3 cut(s) 205, 586, 931
DpnI GATC 3 cut(s) 317, 866, 891
DpnII GATC 3 cut(s) 315, 864, 889
Eam1104I CTCTTC 2 cut(s) 642, 758
EarI CTCTTC 2 cut(s) 642, 758
Eco105I TACGTA 1 cut(s) 794
Eco130I CCWWGG 3 cut(s) 302, 772, 956
Eco147I AGGCCT 1 cut(s) 301
Eco47I GGWCC 3 cut(s) 515, 578, 829
Eco57I CTGAAG 1 cut(s) 830
EcoNI CCTNNNNNAGG 1 cut(s) 383
EcoO109I RGGNCCY 2 cut(s) 362, 829
EcoRI GAATTC 1 cut(s) 917
EcoRII CCWGG 1 cut(s) 667
EcoT14I CCWWGG 3 cut(s) 302, 772, 956
ErhI CCWWGG 3 cut(s) 302, 772, 956
FaeI CATG 2 cut(s) 880, 960
FaqI GGGAC 2 cut(s) 591, 842
FatI CATG 2 cut(s) 876, 956
Fnu4HI GCNGC 2 cut(s) 615, 978
FokI GGATG 2 cut(s) 61, 910
Fsp4HI GCNGC 2 cut(s) 615, 978
FspBI CTAG 5 cut(s) 26, 267, 303, 347, 833
GluI GCNGC 2 cut(s) 615, 978
HaeIII GGCC 2 cut(s) 301, 364
HapII CCGG 2 cut(s) 97, 477
Hin1II CATG 2 cut(s) 880, 960
HinfI GANTC 3 cut(s) 93, 751, 988
HpaII CCGG 2 cut(s) 97, 477
HphI GGTGA 1 cut(s) 400
Hpy166II GTNNAC 4 cut(s) 482, 573, 822, 913
Hpy188I TCNGA 9 cut(s) 41, 297, 315, 533, 566, 712, 849, 894, 1022
Hpy188III TCNNGA 1 cut(s) 992
Hpy8I GTNNAC 4 cut(s) 482, 573, 822, 913
Hpy99I CGWCG 1 cut(s) 328
HpyAV CCTTC 3 cut(s) 82, 875, 942
HpyCH4III ACNGT 6 cut(s) 445, 570, 597, 721, 819, 910
HpyCH4IV ACGT 2 cut(s) 338, 793
HpyCH4V TGCA 6 cut(s) 35, 368, 407, 971, 985, 1027
HpyF10VI GCNNNNNNNGC 2 cut(s) 620, 977
HpyF3I CTNAG 3 cut(s) 205, 586, 931
HpySE526I ACGT 2 cut(s) 338, 793
Hsp92II CATG 2 cut(s) 880, 960
Kzo9I GATC 3 cut(s) 315, 864, 889
LguI GCTCTTC 1 cut(s) 642
LmnI GCTCC 1 cut(s) 859
Lsp1109I GCAGC 2 cut(s) 626, 989
LweI GCATC 2 cut(s) 716, 734
MaeI CTAG 5 cut(s) 26, 267, 303, 347, 833
MaeII ACGT 2 cut(s) 338, 793
MaeIII GTNAC 6 cut(s) 130, 597, 673, 697, 809, 1040
MalI GATC 3 cut(s) 317, 866, 891
MboI GATC 3 cut(s) 315, 864, 889
MboII GAAGA 4 cut(s) 617, 629, 775, 894
MflI RGATCY 1 cut(s) 889
MhlI GDGCHC 1 cut(s) 781
MluCI AATT 5 cut(s) 42, 354, 400, 746, 917
MmeI TCCRAC 2 cut(s) 589, 1000
MnlI CCTC 6 cut(s) 190, 291, 379, 403, 888, 967
MroXI GAANNNNTTC 2 cut(s) 92, 750
MseI TTAA 4 cut(s) 72, 84, 191, 423
MspI CCGG 2 cut(s) 97, 477
MspR9I CCNGG 2 cut(s) 98, 669
Mva1269I GAATGC 1 cut(s) 35
MvaI CCWGG 1 cut(s) 669
MwoI GCNNNNNNNGC 2 cut(s) 620, 977
NciI CCSGG 1 cut(s) 98
NcoI CCATGG 1 cut(s) 956
NdeII GATC 3 cut(s) 315, 864, 889
NlaIII CATG 2 cut(s) 880, 960
NlaIV GGNNCC 2 cut(s) 579, 830
NmuCI GTSAC 1 cut(s) 809
PceI AGGCCT 1 cut(s) 301
PciSI GCTCTTC 1 cut(s) 642
PcsI WCGNNNNNNNCGW 1 cut(s) 179
PctI GAATGC 1 cut(s) 35
PdmI GAANNNNTTC 2 cut(s) 92, 750
PfeI GAWTC 3 cut(s) 93, 751, 988
PflFI GACNNNGTC 1 cut(s) 833
PinAI ACCGGT 1 cut(s) 476
PkrI GCNGC 2 cut(s) 616, 979
Ppu21I YACGTR 1 cut(s) 794
PpuMI RGGWCCY 1 cut(s) 829
Psp5II RGGWCCY 1 cut(s) 829
Psp6I CCWGG 1 cut(s) 667
PspGI CCWGG 1 cut(s) 667
PspN4I GGNNCC 2 cut(s) 579, 830
PspPI GGNCC 4 cut(s) 362, 515, 578, 829
PspPPI RGGWCCY 1 cut(s) 829
PsrI GAACNNNNNNTAC 2 cut(s) 582, 614
PstI CTGCAG 2 cut(s) 370, 987
PsuI RGATCY 1 cut(s) 889
PsyI GACNNNGTC 1 cut(s) 833
RsaI GTAC 6 cut(s) 24, 178, 337, 452, 796, 912
RsaNI GTAC 6 cut(s) 23, 177, 336, 451, 795, 911
SapI GCTCTTC 1 cut(s) 642
SaqAI TTAA 4 cut(s) 72, 84, 191, 423
SatI GCNGC 2 cut(s) 615, 978
Sau3AI GATC 3 cut(s) 315, 864, 889
Sau96I GGNCC 4 cut(s) 362, 515, 578, 829
ScrFI CCNGG 2 cut(s) 98, 669
SduI GDGCHC 1 cut(s) 781
SfaNI GCATC 2 cut(s) 716, 734
SfcI CTRYAG 3 cut(s) 366, 618, 983
SinI GGWCC 3 cut(s) 515, 578, 829
SnaBI TACGTA 1 cut(s) 794
SpeI ACTAGT 1 cut(s) 25
Sse9I AATT 5 cut(s) 42, 354, 400, 746, 917
SseBI AGGCCT 1 cut(s) 301
SspMI CTAG 5 cut(s) 26, 267, 303, 347, 833
StuI AGGCCT 1 cut(s) 301
StyD4I CCNGG 2 cut(s) 96, 667
StyI CCWWGG 3 cut(s) 302, 772, 956
TaaI ACNGT 6 cut(s) 445, 570, 597, 721, 819, 910
TaiI ACGT 2 cut(s) 341, 796
TaqI TCGA 4 cut(s) 182, 323, 867, 993
TasI AATT 5 cut(s) 42, 354, 400, 746, 917
TatI WGTACW 1 cut(s) 910
TfiI GAWTC 3 cut(s) 93, 751, 988
Tru1I TTAA 4 cut(s) 72, 84, 191, 423
Tru9I TTAA 4 cut(s) 72, 84, 191, 423
TscAI CASTG 4 cut(s) 213, 525, 575, 648
TseFI GTSAC 1 cut(s) 809
TseI GCWGC 2 cut(s) 614, 977
Tsp45I GTSAC 1 cut(s) 809
TspDTI ATGAA 1 cut(s) 413
TspGWI ACGGA 2 cut(s) 716, 828
TspRI CASTG 4 cut(s) 213, 525, 575, 648
Tth111I GACNNNGTC 1 cut(s) 833
VpaK11BI GGWCC 3 cut(s) 515, 578, 829
XagI CCTNNNNNAGG 1 cut(s) 383
XapI RAATTY 1 cut(s) 917
XmaJI CCTAGG 1 cut(s) 302
XmnI GAANNNNTTC 2 cut(s) 92, 750
XspI CTAG 5 cut(s) 26, 267, 303, 347, 833
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.