Rmu_sc0003008.1_g000023

Potassium channel

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003008.1
OG0000499
Physical Location & Seq
Reverse (-)
91911 .. 97415
5505 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003008.1_g000023.1.cds

Sequence Viewer

Length: 1689 bp
atgactatctcaggctttggtaccggcgagagagttggtacatttattgacgccttttatgtggcttactgtacggtcttctcagttggtttcagcgatatttctcctccgaagtctcttactcggattctttgtgatgtgctgggattggtggttggacctattgtagtgatggtactcactcattttttgggtcggttagcatgcgagttggggcgacggatttcatcttgcttccgtatgagatatcgagtgtattcagctcttggtatgatcttgctggctctatttttggggatggccggcatttatatcttcgagtggctacacctagctggtggatctccatctccatctccatctccttccactatgttacctactgatgcatacgcatgggtcctctttgttgacatattccacctctcagttatgatgatgactaccactggatttggagatttcgccttcactactgcatctgggagagcgtttgccatagtatgggttcctttctctactatagtgtctatggttgcgagtacgttcttggctcagacttttttgttctatcttgcacgtatcattggagcttgccccaggggatccaccgtcactgacgagcatggaggatccagtttcgtcattcttagatacatttgtcatgttgatgatagtattagtatttcttttcagacagattcagtgttaggttttgagagcgctggccatggtcaagcttctctgcacctgcctccatcttcgatagagaaaaattctggcccttcccatggggtcgcagctatcgagcatgggtcagtccgtttgaggcggaattccgtttggctgccaactgaactggtggctgctggtggttgtaagatttgggatccagggcggttcacggattcgactgagccaggattggatagggttcggctggagtctgtcccccacggatggcggcgagggcactttcaaagggaccaggttgttgggatagcgctgaggtggttgggcgaggaactagtgttcgcccattgtggtggcacagatctgctggcatggggcttgtcgggttcagggccatggagggcagcgctggtgaaagtgtttggcgtcgtggtgacgagggtgggatcgaccttctccgatggattttgggtggggatatcagtgcggcccctcggatcagtggtgtttgggtgcggaggctctcgggtgccccagagaagaggtgctgctagggtggccatgagcttgggtgcccttatcagattcacatgggcttgggcctttgtcaaaggtgctttggcagacttgactgtgggctcgggccggatttggatccgtatttgggatcctggtcgcttacaaatccggatcttggatccgagacagttgcttatattgatatggtattggttctggttcttaggagttcgtttgctaattttcgagtttctgacaccctcggttactttcgaactcctggtgggcgaattacctcttctaggtgatcatatcaccgtattcagggcatcccttgacttgacttcttcatcaaacgctgtggatgaggagagcaccaacctcgtcacacacaaggttcttttctctgccttccggaaaaggacttcttgccttacggataagggctttggtgtggtctcttgcgtcaccgaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000325 GO:0003674 GO:0003824 GO:0004788 GO:0005215 GO:0005216 GO:0005261 GO:0005267 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0005886 GO:0005887 GO:0006725 GO:0006732 GO:0006766 GO:0006767 GO:0006772 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006996 GO:0008150 GO:0008152 GO:0008324 GO:0009058 GO:0009108 GO:0009229 GO:0009314 GO:0009416 GO:0009507 GO:0009532 GO:0009533 GO:0009534 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009657 GO:0009668 GO:0009705 GO:0009987 GO:0010027 GO:0010196 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0016043 GO:0016740 GO:0016772 GO:0016778 GO:0017144 GO:0018130 GO:0019438 GO:0019637 GO:0022607 GO:0022803 GO:0022838 GO:0022840 GO:0022841 GO:0022842 GO:0022857 GO:0022890 GO:0030001 GO:0030322 GO:0031090 GO:0031224 GO:0031226 GO:0031976 GO:0031984 GO:0034220 GO:0034641 GO:0042357 GO:0042391 GO:0042723 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044249 GO:0044271 GO:0044272 GO:0044281 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0046483 GO:0046873 GO:0050896 GO:0051179 GO:0051186 GO:0051188 GO:0051234 GO:0051259 GO:0051260 GO:0055085 GO:0061024 GO:0065003 GO:0065007 GO:0065008 GO:0071704 GO:0071804 GO:0071805 GO:0071840 GO:0071944 GO:0072527 GO:0072528 GO:0090407 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1990066
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ion_trans_2

Protein Analysis

562

Amino Acids

61.42

Weight (kDa)

8.77

Isoelectric Point (pI)

37.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000499)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G02510
fragaria_vesca FvH4_6g16970 FvH4_6g16980 FvH4_7g01220 FvH4_7g01220 FvH4_7g01220 FvH4_7g01240
malus_domestica MD05G1161500.v1.1
pyrus_communis pycom05g15160
rosa_chinensis RchiOBHm_Chr1g0316711 RchiOBHm_Chr1g0316801 RchiOBHm_Chr1g0316871 RchiOBHm_Chr1g0316881 RchiOBHm_Chr1g0316951 RchiOBHm_Chr3g0470991 RchiOBHm_Chr4g0402171
rosa_laevigata RLG00000001679 RLG00000001680 RLG00000007591 RLG00000009108 RLG00000024215 RLG00000024221 RLG00000030636 RLG00000030640 RLG00000030642 RLG00000030648 RLG00000030651 RLG00000030658 RLG00000030667
rosa_multiflora Rmu_sc0000839.1_g000010 Rmu_sc0002667.1_g000003 Rmu_sc0003008.1_g000023 Rmu_sc0003008.1_g000047 Rmu_sc0005604.1_g000001 Rmu_sc0005939.1_g000001 Rmu_sc0006790.1_g000011 Rmu_sc0007472.1_g000004 Rmu_sc0017515.1_g000001 Rmu_sc0019753.1_g000003 Rmu_sc0020172.1_g000001 Rmu_sc0023783.1_g000001
rosa_roxburghii Rroxscaffold_4G00330760 Rroxscaffold_4G00330800 Rroxscaffold_4G00330810 Rroxscaffold_4G00330950
rosa_rugosa Rorug01G0011200 Rorug01G0011500 Rorug01G0011600 Rorug01G0012300 Rorug01G0012300 Rorug01G0012400 Rorug01G0012500 Rorug01G0012600 Rorug01G0012600 Rorug01G0013400 Rorug01G0013400 Rorug01G0013500
rosa_samantha Rh1AG021100 Rh1AG022800 Rh1AG023300 Rh1AG023500 Rh1AG024000 Rh1AG024300 Rh1BG016000 Rh1BG016300 Rh1BG021300 Rh1BG021500 Rh1CG020300 Rh1CG022500 Rh1DG016300 Rh1DG016400 Rh1DG017300 Rh1DG017400 Rh1DG017700 Rh1DG017800 Rh1DG018200 Rh1DG019100 Rh1DG019900 Rh1DG020200 Rh1DG020800 Rh1DG021300 Rh1DG021400 Rh1DG021800 Rh3DG186400
rosa_wichuraiana Rw1G001370 Rw1G001480 Rw1G001650 Rw1G001680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 759
Acc36I ACCTGC 1 cut(s) 759
Acc65I GGTACC 1 cut(s) 20
AccB1I GGYRCC 3 cut(s) 20, 1222, 1265
AccB7I CCANNNNNTGG 1 cut(s) 504
AccIII TCCGGA 2 cut(s) 1380, 1626
AciI CCGC 5 cut(s) 832, 898, 964, 1180, 1209
AcoI YGGCCR 3 cut(s) 300, 727, 1251
AcsI RAATTY 2 cut(s) 775, 835
AcyI GRCGYC 2 cut(s) 51, 1119
AfaI GTAC 5 cut(s) 22, 40, 73, 177, 544
AfeI AGCGCT 3 cut(s) 724, 1005, 1101
AfiI CCNNNNNNNGG 7 cut(s) 504, 791, 960, 1357, 1387, 1514, 1536
AgsI TTSAA 1 cut(s) 980
AhlI ACTAGT 1 cut(s) 1027
AjnI CCWGG 6 cut(s) 599, 892, 919, 987, 1363, 1491
AloI GAACNNNNNNTCC 2 cut(s) 1016, 1048
AluBI AGCT 6 cut(s) 263, 335, 593, 740, 803, 1260
AluI AGCT 6 cut(s) 263, 335, 593, 740, 803, 1260
Alw21I GWGCWC 1 cut(s) 1589
Alw26I GTCTC 3 cut(s) 120, 1390, 1675
Ama87I CYCGRG 2 cut(s) 1218, 1333
Aor13HI TCCGGA 2 cut(s) 1380, 1626
Aor51HI AGCGCT 3 cut(s) 724, 1005, 1101
AoxI GGCC 8 cut(s) 300, 727, 781, 1085, 1181, 1251, 1293, 1336
ApeKI GCWGC 5 cut(s) 800, 847, 866, 1097, 1241
ApoI RAATTY 2 cut(s) 775, 835
Asp718I GGTACC 1 cut(s) 20
AspLEI GCGC 3 cut(s) 725, 1006, 1102
AspS9I GGNCC 8 cut(s) 158, 400, 782, 985, 1085, 1182, 1293, 1336
AsuHPI GGTGA 5 cut(s) 1117, 1138, 1519, 1529, 1672
AsuII TTCGAA 1 cut(s) 1485
AvaI CYCGRG 2 cut(s) 1218, 1333
AvaII GGWCC 3 cut(s) 158, 400, 985
BaeGI GKGCMC 3 cut(s) 975, 1227, 1270
BaeI ACNNNNGTAYC 2 cut(s) 646, 679
BalI TGGCCA 2 cut(s) 729, 1253
BamHI GGATCC 6 cut(s) 605, 632, 889, 1347, 1360, 1390
BanI GGYRCC 3 cut(s) 20, 1222, 1265
BanII GRGCYC 1 cut(s) 1334
BbsI GAAGAC 1 cut(s) 70
Bbv12I GWGCWC 1 cut(s) 1589
BbvCI CCTCAGC 1 cut(s) 1007
BbvI GCAGC 5 cut(s) 812, 834, 853, 1109, 1228
BccI CCATC 8 cut(s) 166, 292, 355, 361, 367, 766, 954, 1148
BcgI CGANNNNNNTGC 4 cut(s) 1384, 1418, 1576, 1610
BciT130I CCWGG 6 cut(s) 601, 894, 921, 989, 1365, 1493
BclI TGATCA 1 cut(s) 1519
BcoDI GTCTC 3 cut(s) 120, 1390, 1675
BcuI ACTAGT 1 cut(s) 1027
BfaI CTAG 4 cut(s) 332, 1028, 1245, 1514
BfmI CTRYAG 1 cut(s) 522
BfoI RGCGCY 3 cut(s) 726, 1007, 1103
BfuAI ACCTGC 1 cut(s) 759
BglII AGATCT 1 cut(s) 1054
BisI GCNGC 7 cut(s) 801, 848, 867, 965, 1098, 1181, 1242
BlsI GCNGC 7 cut(s) 802, 849, 868, 966, 1099, 1182, 1243
Bme1390I CCNGG 6 cut(s) 601, 894, 921, 989, 1365, 1493
Bme18I GGWCC 3 cut(s) 158, 400, 985
BmeT110I CYCGRG 2 cut(s) 1218, 1333
BmgT120I GGNCC 8 cut(s) 158, 400, 782, 985, 1085, 1182, 1293, 1336
BmrFI CCNGG 6 cut(s) 601, 894, 921, 989, 1365, 1493
BmsI GCATC 3 cut(s) 376, 488, 1550
BpiI GAAGAC 1 cut(s) 70
BpmI CTGGAG 1 cut(s) 962
Bpu10I CCTNAGC 1 cut(s) 1007
Bpu14I TTCGAA 1 cut(s) 1485
BsaAI YACGTR 1 cut(s) 581
BsaBI GATNNNNATC 2 cut(s) 346, 1346
BsaHI GRCGYC 2 cut(s) 51, 1119
BsaI GGTCTC 1 cut(s) 1675
BsaJI CCNNGG 9 cut(s) 599, 600, 730, 790, 893, 955, 1088, 1186, 1473
BsaWI WCCGGW 2 cut(s) 1380, 1626
Bsc4I CCNNNNNNNGG 7 cut(s) 504, 791, 960, 1357, 1387, 1514, 1536
Bse118I RCCGGY 2 cut(s) 23, 302
Bse1I ACTGG 3 cut(s) 454, 636, 864
Bse8I GATNNNNATC 2 cut(s) 346, 1346
BseAI TCCGGA 2 cut(s) 1380, 1626
BseBI CCWGG 6 cut(s) 601, 894, 921, 989, 1365, 1493
BseDI CCNNGG 9 cut(s) 599, 600, 730, 790, 893, 955, 1088, 1186, 1473
BseGI GGATG 4 cut(s) 303, 965, 1541, 1582
BseJI GATNNNNATC 2 cut(s) 346, 1346
BseLI CCNNNNNNNGG 7 cut(s) 504, 791, 960, 1357, 1387, 1514, 1536
BseMII CTCAG 6 cut(s) 24, 96, 441, 569, 906, 998
BseNI ACTGG 3 cut(s) 454, 636, 864
BseRI GAGGAG 2 cut(s) 96, 1595
BseSI GKGCMC 3 cut(s) 975, 1227, 1270
BseXI GCAGC 5 cut(s) 812, 834, 853, 1109, 1228
BseYI CCCAGC 1 cut(s) 142
BsgI GTGCAG 1 cut(s) 731
BshFI GGCC 8 cut(s) 302, 729, 783, 1087, 1183, 1253, 1295, 1338
BshNI GGYRCC 3 cut(s) 20, 1222, 1265
BsiHKAI GWGCWC 1 cut(s) 1589
BsiHKCI CYCGRG 2 cut(s) 1218, 1333
BsiSI CCGG 5 cut(s) 24, 303, 1339, 1381, 1627
BslFI GGGAC 2 cut(s) 935, 998
BslI CCNNNNNNNGG 7 cut(s) 504, 791, 960, 1357, 1387, 1514, 1536
BsmAI GTCTC 3 cut(s) 120, 1390, 1675
BsmFI GGGAC 2 cut(s) 935, 998
BsnI GGCC 8 cut(s) 302, 729, 783, 1087, 1183, 1253, 1295, 1338
Bso31I GGTCTC 1 cut(s) 1675
BsoBI CYCGRG 2 cut(s) 1218, 1333
Bsp119I TTCGAA 1 cut(s) 1485
Bsp1286I GDGCHC 5 cut(s) 975, 1227, 1270, 1334, 1589
Bsp13I TCCGGA 2 cut(s) 1380, 1626
Bsp19I CCATGG 3 cut(s) 730, 790, 1088
BspACI CCGC 5 cut(s) 832, 898, 964, 1180, 1209
BspANI GGCC 8 cut(s) 302, 729, 783, 1087, 1183, 1253, 1295, 1338
BspCNI CTCAG 6 cut(s) 23, 95, 440, 568, 907, 999
BspEI TCCGGA 2 cut(s) 1380, 1626
BspMI ACCTGC 1 cut(s) 759
BspT104I TTCGAA 1 cut(s) 1485
BspT107I GGYRCC 3 cut(s) 20, 1222, 1265
BspTNI GGTCTC 1 cut(s) 1675
BsrFI RCCGGY 2 cut(s) 23, 302
BsrI ACTGG 3 cut(s) 454, 636, 864
BssAI RCCGGY 2 cut(s) 23, 302
BssECI CCNNGG 9 cut(s) 599, 600, 730, 790, 893, 955, 1088, 1186, 1473
BssNI GRCGYC 2 cut(s) 51, 1119
BssT1I CCWWGG 3 cut(s) 730, 790, 1088
Bst2UI CCWGG 6 cut(s) 601, 894, 921, 989, 1365, 1493
Bst4CI ACNGT 6 cut(s) 71, 76, 613, 1327, 1401, 1531
Bst6I CTCTTC 2 cut(s) 1228, 1515
BstACI GRCGYC 2 cut(s) 51, 1119
BstBAI YACGTR 1 cut(s) 581
BstBI TTCGAA 1 cut(s) 1485
BstC8I GCNNGC 6 cut(s) 205, 282, 304, 595, 727, 1062
BstDEI CTNAG 8 cut(s) 10, 82, 427, 555, 650, 915, 1007, 1435
BstDSI CCRYGG 4 cut(s) 730, 790, 955, 1088
BstENI CCTNNNNNAGG 1 cut(s) 1512
BstF5I GGATG 4 cut(s) 303, 965, 1541, 1582
BstH2I RGCGCY 3 cut(s) 726, 1007, 1103
BstHHI GCGC 3 cut(s) 725, 1006, 1102
BstMAI GTCTC 3 cut(s) 120, 1390, 1675
BstMWI GCNNNNNNNGC 2 cut(s) 970, 1250
BstNI CCWGG 6 cut(s) 601, 894, 921, 989, 1365, 1493
BstNSI RCATGY 1 cut(s) 207
BstSCI CCNGG 6 cut(s) 599, 892, 919, 987, 1363, 1491
BstSFI CTRYAG 1 cut(s) 522
BstSLI GKGCMC 3 cut(s) 975, 1227, 1270
BstV1I GCAGC 5 cut(s) 812, 834, 853, 1109, 1228
BstV2I GAAGAC 1 cut(s) 70
BstX2I RGATCY 9 cut(s) 341, 605, 632, 889, 1054, 1347, 1360, 1383, 1390
BstXI CCANNNNNNTGG 3 cut(s) 995, 1046, 1261
BstYI RGATCY 9 cut(s) 341, 605, 632, 889, 1054, 1347, 1360, 1383, 1390
BsuRI GGCC 8 cut(s) 302, 729, 783, 1087, 1183, 1253, 1295, 1338
BtgI CCRYGG 4 cut(s) 730, 790, 955, 1088
BtsCI GGATG 4 cut(s) 303, 965, 1541, 1582
BtsIMutI CAGTG 5 cut(s) 447, 615, 711, 1182, 1200
BveI ACCTGC 1 cut(s) 759
Cac8I GCNNGC 6 cut(s) 205, 282, 304, 595, 727, 1062
CfoI GCGC 3 cut(s) 725, 1006, 1102
Cfr10I RCCGGY 2 cut(s) 23, 302
Cfr13I GGNCC 8 cut(s) 158, 400, 782, 985, 1085, 1182, 1293, 1336
CseI GACGC 3 cut(s) 59, 1108, 1666
CsiI ACCWGGT 1 cut(s) 987
Csp6I GTAC 5 cut(s) 21, 39, 72, 176, 543
CspCI CAANNNNNGTGG 4 cut(s) 436, 471, 1554, 1589
CviQI GTAC 5 cut(s) 21, 39, 72, 176, 543
DdeI CTNAG 8 cut(s) 10, 82, 427, 555, 650, 915, 1007, 1435
EaeI YGGCCR 3 cut(s) 300, 727, 1251
Eam1104I CTCTTC 2 cut(s) 1228, 1515
EarI CTCTTC 2 cut(s) 1228, 1515
EciI GGCGGA 1 cut(s) 847
Eco130I CCWWGG 3 cut(s) 730, 790, 1088
Eco24I GRGCYC 1 cut(s) 1334
Eco31I GGTCTC 1 cut(s) 1675
Eco32I GATATC 2 cut(s) 248, 1173
Eco47I GGWCC 3 cut(s) 158, 400, 985
Eco47III AGCGCT 3 cut(s) 724, 1005, 1101
Eco88I CYCGRG 2 cut(s) 1218, 1333
EcoNI CCTNNNNNAGG 1 cut(s) 1512
EcoO109I RGGNCCY 1 cut(s) 400
EcoRI GAATTC 1 cut(s) 835
EcoRII CCWGG 6 cut(s) 599, 892, 919, 987, 1363, 1491
EcoRV GATATC 2 cut(s) 248, 1173
EcoT14I CCWWGG 3 cut(s) 730, 790, 1088
EcoT22I ATGCAT 1 cut(s) 391
EcoT38I GRGCYC 1 cut(s) 1334
ErhI CCWWGG 3 cut(s) 730, 790, 1088
FalI AAGNNNNNCTT 2 cut(s) 1624, 1656
FaqI GGGAC 2 cut(s) 935, 998
FbaI TGATCA 1 cut(s) 1519
Fnu4HI GCNGC 7 cut(s) 801, 848, 867, 965, 1098, 1181, 1242
FokI GGATG 4 cut(s) 310, 972, 1528, 1589
FriOI GRGCYC 1 cut(s) 1334
Fsp4HI GCNGC 7 cut(s) 801, 848, 867, 965, 1098, 1181, 1242
FspBI CTAG 4 cut(s) 332, 1028, 1245, 1514
GlaI GCGC 3 cut(s) 724, 1005, 1101
GluI GCNGC 7 cut(s) 801, 848, 867, 965, 1098, 1181, 1242
GsaI CCCAGC 1 cut(s) 146
GsuI CTGGAG 1 cut(s) 962
HaeII RGCGCY 3 cut(s) 726, 1007, 1103
HaeIII GGCC 8 cut(s) 302, 729, 783, 1087, 1183, 1253, 1295, 1338
HapII CCGG 5 cut(s) 24, 303, 1339, 1381, 1627
HgaI GACGC 3 cut(s) 59, 1108, 1666
HhaI GCGC 3 cut(s) 725, 1006, 1102
Hin1I GRCGYC 2 cut(s) 51, 1119
Hin6I GCGC 3 cut(s) 723, 1004, 1100
HinP1I GCGC 3 cut(s) 723, 1004, 1100
HincII GTYRAC 1 cut(s) 412
HindII GTYRAC 1 cut(s) 412
HindIII AAGCTT 1 cut(s) 738
HinfI GANTC 5 cut(s) 127, 701, 908, 944, 1278
HpaII CCGG 5 cut(s) 24, 303, 1339, 1381, 1627
HphI GGTGA 5 cut(s) 1117, 1138, 1519, 1529, 1672
Hpy166II GTNNAC 2 cut(s) 412, 903
Hpy188I TCNGA 9 cut(s) 111, 126, 558, 696, 1153, 1190, 1277, 1395, 1467
Hpy188III TCNNGA 2 cut(s) 1381, 1627
Hpy8I GTNNAC 2 cut(s) 412, 903
Hpy99I CGWCG 2 cut(s) 222, 1124
HpyAV CCTTC 5 cut(s) 375, 478, 795, 1156, 1633
HpyCH4III ACNGT 6 cut(s) 71, 76, 613, 1327, 1401, 1531
HpyCH4IV ACGT 2 cut(s) 545, 580
HpyCH4V TGCA 4 cut(s) 389, 479, 578, 748
HpyF10VI GCNNNNNNNGC 2 cut(s) 970, 1250
HpyF3I CTNAG 8 cut(s) 10, 82, 427, 555, 650, 915, 1007, 1435
HpySE526I ACGT 2 cut(s) 545, 580
Hsp92I GRCGYC 2 cut(s) 51, 1119
HspAI GCGC 3 cut(s) 723, 1004, 1100
Kpn2I TCCGGA 2 cut(s) 1380, 1626
KpnI GGTACC 1 cut(s) 24
KroI GCCGGC 1 cut(s) 302
KroNI GCCGGC 1 cut(s) 304
Ksp22I TGATCA 1 cut(s) 1519
LmnI GCTCC 1 cut(s) 590
Lsp1109I GCAGC 5 cut(s) 812, 834, 853, 1109, 1228
LweI GCATC 3 cut(s) 376, 488, 1550
MabI ACCWGGT 1 cut(s) 987
MaeI CTAG 4 cut(s) 332, 1028, 1245, 1514
MaeII ACGT 2 cut(s) 545, 580
MaeIII GTNAC 6 cut(s) 375, 613, 1126, 1477, 1597, 1678
MboII GAAGA 6 cut(s) 70, 307, 753, 1245, 1502, 1551
MflI RGATCY 9 cut(s) 341, 605, 632, 889, 1054, 1347, 1360, 1383, 1390
MhlI GDGCHC 5 cut(s) 975, 1227, 1270, 1334, 1589
MlsI TGGCCA 2 cut(s) 729, 1253
MluCI AATT 4 cut(s) 775, 835, 1452, 1502
MluNI TGGCCA 2 cut(s) 729, 1253
MlyI GAGTC 1 cut(s) 953
MmeI TCCRAC 1 cut(s) 136
Mox20I TGGCCA 2 cut(s) 729, 1253
Mph1103I ATGCAT 1 cut(s) 391
MroI TCCGGA 2 cut(s) 1380, 1626
MroNI GCCGGC 1 cut(s) 302
MscI TGGCCA 2 cut(s) 729, 1253
MslI CAYNNNNRTG 3 cut(s) 394, 669, 1044
Msp20I TGGCCA 2 cut(s) 729, 1253
MspI CCGG 5 cut(s) 24, 303, 1339, 1381, 1627
MspR9I CCNGG 6 cut(s) 601, 894, 921, 989, 1365, 1493
MvaI CCWGG 6 cut(s) 601, 894, 921, 989, 1365, 1493
MwoI GCNNNNNNNGC 2 cut(s) 970, 1250
NaeI GCCGGC 1 cut(s) 304
NcoI CCATGG 3 cut(s) 730, 790, 1088
NgoMIV GCCGGC 1 cut(s) 302
NmuCI GTSAC 4 cut(s) 613, 1126, 1597, 1678
NsiI ATGCAT 1 cut(s) 391
NspI RCATGY 1 cut(s) 207
NspV TTCGAA 1 cut(s) 1485
PaeI GCATGC 1 cut(s) 207
PaqCI CACCTGC 1 cut(s) 759
PasI CCCWGGG 1 cut(s) 600
PcsI WCGNNNNNNNCGW 1 cut(s) 804
PdiI GCCGGC 1 cut(s) 304
PfeI GAWTC 4 cut(s) 127, 701, 908, 1278
PflMI CCANNNNNTGG 1 cut(s) 504
PkrI GCNGC 7 cut(s) 802, 849, 868, 966, 1099, 1182, 1243
PleI GAGTC 1 cut(s) 952
PpsI GAGTC 1 cut(s) 952
Ppu21I YACGTR 1 cut(s) 581
PpuMI RGGWCCY 1 cut(s) 400
Psp5II RGGWCCY 1 cut(s) 400
Psp6I CCWGG 6 cut(s) 599, 892, 919, 987, 1363, 1491
PspFI CCCAGC 1 cut(s) 142
PspGI CCWGG 6 cut(s) 599, 892, 919, 987, 1363, 1491
PspPI GGNCC 8 cut(s) 158, 400, 782, 985, 1085, 1182, 1293, 1336
PspPPI RGGWCCY 1 cut(s) 400
PsuI RGATCY 9 cut(s) 341, 605, 632, 889, 1054, 1347, 1360, 1383, 1390
RsaI GTAC 5 cut(s) 22, 40, 73, 177, 544
RsaNI GTAC 5 cut(s) 21, 39, 72, 176, 543
RseI CAYNNNNRTG 3 cut(s) 394, 669, 1044
SatI GCNGC 7 cut(s) 801, 848, 867, 965, 1098, 1181, 1242
Sau96I GGNCC 8 cut(s) 158, 400, 782, 985, 1085, 1182, 1293, 1336
SchI GAGTC 1 cut(s) 953
ScrFI CCNGG 6 cut(s) 601, 894, 921, 989, 1365, 1493
SduI GDGCHC 5 cut(s) 975, 1227, 1270, 1334, 1589
SexAI ACCWGGT 1 cut(s) 987
SfaNI GCATC 3 cut(s) 376, 488, 1550
SfcI CTRYAG 1 cut(s) 522
SfuI TTCGAA 1 cut(s) 1485
SinI GGWCC 3 cut(s) 158, 400, 985
SmiMI CAYNNNNRTG 3 cut(s) 394, 669, 1044
SpeI ACTAGT 1 cut(s) 1027
SphI GCATGC 1 cut(s) 207
Sse9I AATT 4 cut(s) 775, 835, 1452, 1502
SsiI CCGC 5 cut(s) 832, 898, 964, 1180, 1209
SspMI CTAG 4 cut(s) 332, 1028, 1245, 1514
StyD4I CCNGG 6 cut(s) 599, 892, 919, 987, 1363, 1491
StyI CCWWGG 3 cut(s) 730, 790, 1088
TaaI ACNGT 6 cut(s) 71, 76, 613, 1327, 1401, 1531
TaiI ACGT 2 cut(s) 548, 583
TaqI TCGA 8 cut(s) 250, 318, 764, 807, 911, 1142, 1458, 1485
TasI AATT 4 cut(s) 775, 835, 1452, 1502
TauI GCSGC 2 cut(s) 967, 1183
TfiI GAWTC 4 cut(s) 127, 701, 908, 1278
TscAI CASTG 5 cut(s) 454, 622, 711, 1182, 1200
TseFI GTSAC 4 cut(s) 613, 1126, 1597, 1678
TseI GCWGC 5 cut(s) 800, 847, 866, 1097, 1241
Tsp45I GTSAC 4 cut(s) 613, 1126, 1597, 1678
TspDTI ATGAA 2 cut(s) 216, 1551
TspGWI ACGGA 8 cut(s) 227, 235, 812, 829, 920, 972, 1340, 1664
TspRI CASTG 5 cut(s) 454, 622, 711, 1182, 1200
Van91I CCANNNNNTGG 1 cut(s) 504
VpaK11BI GGWCC 3 cut(s) 158, 400, 985
XagI CCTNNNNNAGG 1 cut(s) 1512
XapI RAATTY 2 cut(s) 775, 835
XceI RCATGY 1 cut(s) 207
XspI CTAG 4 cut(s) 332, 1028, 1245, 1514
Zsp2I ATGCAT 1 cut(s) 391
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.