Cyclic nucleotide-gated ion channel 1-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 653 |
| Acc16I | TGCGCA | 1 cut(s) | 1767 |
| Acc65I | GGTACC | 2 cut(s) | 4, 1384 |
| AccB1I | GGYRCC | 2 cut(s) | 4, 1384 |
| AccBSI | CCGCTC | 1 cut(s) | 1373 |
| AccI | GTMKAC | 1 cut(s) | 399 |
| AciI | CCGC | 4 cut(s) | 395, 729, 1139, 1373 |
| AclWI | GGATC | 6 cut(s) | 245, 258, 1005, 1018, 1820, 1833 |
| AcsI | RAATTY | 4 cut(s) | 96, 629, 754, 1018 |
| AcuI | CTGAAG | 1 cut(s) | 1244 |
| AfaI | GTAC | 7 cut(s) | 6, 803, 1040, 1179, 1365, 1386, 1436 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 304, 580, 1661 |
| AflIII | ACRYGT | 1 cut(s) | 1666 |
| AgsI | TTSAA | 7 cut(s) | 36, 201, 906, 1397, 1420, 1532, 1744 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 152 |
| AjiI | CACGTC | 1 cut(s) | 1667 |
| AjnI | CCWGG | 1 cut(s) | 859 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 16, 35, 48, 67 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 242, 274 |
| AluBI | AGCT | 6 cut(s) | 329, 380, 794, 1033, 1425, 1495 |
| AluI | AGCT | 6 cut(s) | 329, 380, 794, 1033, 1425, 1495 |
| Alw26I | GTCTC | 4 cut(s) | 470, 818, 1216, 1475 |
| AlwI | GGATC | 6 cut(s) | 245, 258, 1005, 1018, 1820, 1833 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 626 |
| AoxI | GGCC | 3 cut(s) | 334, 1054, 1707 |
| ApeKI | GCWGC | 2 cut(s) | 791, 890 |
| ApoI | RAATTY | 4 cut(s) | 96, 629, 754, 1018 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 62, 94 |
| AseI | ATTAAT | 1 cut(s) | 1758 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 633 |
| Asp718I | GGTACC | 2 cut(s) | 4, 1384 |
| AspLEI | GCGC | 1 cut(s) | 1768 |
| AspS9I | GGNCC | 1 cut(s) | 1054 |
| AsuC2I | CCSGG | 1 cut(s) | 1662 |
| AsuHPI | GGTGA | 4 cut(s) | 1481, 1535, 1592, 1650 |
| AsuII | TTCGAA | 1 cut(s) | 127 |
| AsuNHI | GCTAGC | 1 cut(s) | 776 |
| BamHI | GGATCC | 3 cut(s) | 250, 1010, 1825 |
| BanI | GGYRCC | 2 cut(s) | 4, 1384 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1377, 1409 |
| BbsI | GAAGAC | 1 cut(s) | 876 |
| BbvI | GCAGC | 2 cut(s) | 803, 877 |
| BccI | CCATC | 3 cut(s) | 417, 578, 1396 |
| BceAI | ACGGC | 1 cut(s) | 514 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1679, 1713 |
| BciT130I | CCWGG | 1 cut(s) | 861 |
| BciVI | GTATCC | 1 cut(s) | 203 |
| BclI | TGATCA | 1 cut(s) | 1498 |
| BcnI | CCSGG | 1 cut(s) | 1662 |
| BcoDI | GTCTC | 4 cut(s) | 470, 818, 1216, 1475 |
| BfaI | CTAG | 3 cut(s) | 519, 777, 1571 |
| BfmI | CTRYAG | 3 cut(s) | 324, 813, 957 |
| BfuI | GTATCC | 1 cut(s) | 203 |
| BisI | GCNGC | 2 cut(s) | 792, 891 |
| BlsI | GCNGC | 2 cut(s) | 793, 892 |
| Bme1390I | CCNGG | 2 cut(s) | 861, 1662 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 152 |
| BmgBI | CACGTC | 1 cut(s) | 1667 |
| BmgT120I | GGNCC | 1 cut(s) | 1054 |
| BmiI | GGNNCC | 6 cut(s) | 6, 252, 1012, 1055, 1386, 1827 |
| BmrFI | CCNGG | 2 cut(s) | 861, 1662 |
| BmrI | ACTGGG | 1 cut(s) | 3 |
| BmsI | GCATC | 4 cut(s) | 516, 1126, 1622, 1824 |
| BmtI | GCTAGC | 1 cut(s) | 780 |
| BmuI | ACTGGG | 1 cut(s) | 3 |
| BpiI | GAAGAC | 1 cut(s) | 876 |
| BpmI | CTGGAG | 1 cut(s) | 843 |
| Bpu14I | TTCGAA | 1 cut(s) | 127 |
| BpuEI | CTTGAG | 1 cut(s) | 1688 |
| BpuMI | CCSGG | 1 cut(s) | 1662 |
| Bsa29I | ATCGAT | 1 cut(s) | 279 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1511 |
| BsaJI | CCNNGG | 1 cut(s) | 530 |
| BsaWI | WCCGGW | 1 cut(s) | 1007 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 304, 580, 1661 |
| Bse1I | ACTGG | 3 cut(s) | 9, 252, 1747 |
| Bse3DI | GCAATG | 1 cut(s) | 892 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1511 |
| BseBI | CCWGG | 1 cut(s) | 861 |
| BseCI | ATCGAT | 1 cut(s) | 279 |
| BseDI | CCNNGG | 1 cut(s) | 530 |
| BseGI | GGATG | 9 cut(s) | 409, 531, 570, 768, 1141, 1200, 1297, 1411, 1807 |
| BseJI | GATNNNNATC | 1 cut(s) | 1511 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 304, 580, 1661 |
| BseMI | GCAATG | 1 cut(s) | 892 |
| BseMII | CTCAG | 1 cut(s) | 395 |
| BseNI | ACTGG | 3 cut(s) | 9, 252, 1747 |
| BseXI | GCAGC | 2 cut(s) | 803, 877 |
| BseYI | CCCAGC | 1 cut(s) | 1731 |
| BsgI | GTGCAG | 1 cut(s) | 1286 |
| BshFI | GGCC | 3 cut(s) | 336, 1056, 1709 |
| BshNI | GGYRCC | 2 cut(s) | 4, 1384 |
| BshVI | ATCGAT | 1 cut(s) | 279 |
| BsiSI | CCGG | 3 cut(s) | 456, 1008, 1662 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 304, 580, 1661 |
| BsmAI | GTCTC | 4 cut(s) | 470, 818, 1216, 1475 |
| BsmI | GAATGC | 2 cut(s) | 958, 1538 |
| BsnI | GGCC | 3 cut(s) | 336, 1056, 1709 |
| Bsp119I | TTCGAA | 1 cut(s) | 127 |
| Bsp143I | GATC | 7 cut(s) | 250, 1010, 1233, 1486, 1498, 1506, 1825 |
| BspACI | CCGC | 4 cut(s) | 395, 729, 1139, 1373 |
| BspANI | GGCC | 3 cut(s) | 336, 1056, 1709 |
| BspCNI | CTCAG | 1 cut(s) | 394 |
| BspDI | ATCGAT | 1 cut(s) | 279 |
| BspLI | GGNNCC | 6 cut(s) | 6, 252, 1012, 1055, 1386, 1827 |
| BspOI | GCTAGC | 1 cut(s) | 780 |
| BspPI | GGATC | 6 cut(s) | 245, 258, 1005, 1018, 1820, 1833 |
| BspT104I | TTCGAA | 1 cut(s) | 127 |
| BspT107I | GGYRCC | 2 cut(s) | 4, 1384 |
| BsrBI | CCGCTC | 1 cut(s) | 1373 |
| BsrDI | GCAATG | 1 cut(s) | 892 |
| BsrI | ACTGG | 3 cut(s) | 9, 252, 1747 |
| BssECI | CCNNGG | 1 cut(s) | 530 |
| BssMI | GATC | 7 cut(s) | 250, 1010, 1233, 1486, 1498, 1506, 1825 |
| Bst2UI | CCWGG | 1 cut(s) | 861 |
| Bst4CI | ACNGT | 6 cut(s) | 85, 111, 154, 367, 919, 961 |
| Bst6I | CTCTTC | 2 cut(s) | 1653, 1809 |
| BstBI | TTCGAA | 1 cut(s) | 127 |
| BstC8I | GCNNGC | 4 cut(s) | 713, 778, 895, 1559 |
| BstDEI | CTNAG | 4 cut(s) | 381, 638, 922, 1067 |
| BstDSI | CCRYGG | 1 cut(s) | 530 |
| BstF5I | GGATG | 9 cut(s) | 409, 531, 570, 768, 1141, 1200, 1297, 1411, 1807 |
| BstHHI | GCGC | 1 cut(s) | 1768 |
| BstKTI | GATC | 7 cut(s) | 253, 1013, 1236, 1489, 1501, 1509, 1828 |
| BstMAI | GTCTC | 4 cut(s) | 470, 818, 1216, 1475 |
| BstMBI | GATC | 7 cut(s) | 250, 1010, 1233, 1486, 1498, 1506, 1825 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 53, 621, 1706 |
| BstNI | CCWGG | 1 cut(s) | 861 |
| BstSCI | CCNGG | 2 cut(s) | 859, 1660 |
| BstSFI | CTRYAG | 3 cut(s) | 324, 813, 957 |
| BstV1I | GCAGC | 2 cut(s) | 803, 877 |
| BstV2I | GAAGAC | 1 cut(s) | 876 |
| BstX2I | RGATCY | 3 cut(s) | 250, 1010, 1825 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 75 |
| BstYI | RGATCY | 3 cut(s) | 250, 1010, 1825 |
| Bsu15I | ATCGAT | 1 cut(s) | 279 |
| BsuI | GTATCC | 1 cut(s) | 203 |
| BsuRI | GGCC | 3 cut(s) | 336, 1056, 1709 |
| BsuTUI | ATCGAT | 1 cut(s) | 279 |
| BtgI | CCRYGG | 1 cut(s) | 530 |
| BtrI | CACGTC | 1 cut(s) | 1667 |
| BtsCI | GGATG | 9 cut(s) | 409, 531, 570, 768, 1141, 1200, 1297, 1411, 1807 |
| BtsI | GCAGTG | 1 cut(s) | 309 |
| BtsIMutI | CAGTG | 3 cut(s) | 245, 309, 624 |
| Cac8I | GCNNGC | 4 cut(s) | 713, 778, 895, 1559 |
| CaiI | CAGNNNCTG | 1 cut(s) | 626 |
| CfoI | GCGC | 1 cut(s) | 1768 |
| Cfr13I | GGNCC | 1 cut(s) | 1054 |
| ClaI | ATCGAT | 1 cut(s) | 279 |
| Csp6I | GTAC | 7 cut(s) | 5, 802, 1039, 1178, 1364, 1385, 1435 |
| CviAII | CATG | 8 cut(s) | 48, 75, 782, 1390, 1438, 1549, 1627, 1822 |
| CviQI | GTAC | 7 cut(s) | 5, 802, 1039, 1178, 1364, 1385, 1435 |
| DdeI | CTNAG | 4 cut(s) | 381, 638, 922, 1067 |
| DpnI | GATC | 7 cut(s) | 252, 1012, 1235, 1488, 1500, 1508, 1827 |
| DpnII | GATC | 7 cut(s) | 250, 1010, 1233, 1486, 1498, 1506, 1825 |
| DriI | GACNNNNNGTC | 1 cut(s) | 152 |
| Eam1104I | CTCTTC | 2 cut(s) | 1653, 1809 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 152 |
| EarI | CTCTTC | 2 cut(s) | 1653, 1809 |
| EciI | GGCGGA | 1 cut(s) | 744 |
| Eco147I | AGGCCT | 1 cut(s) | 1709 |
| Eco32I | GATATC | 1 cut(s) | 355 |
| Eco57I | CTGAAG | 1 cut(s) | 1244 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1054 |
| EcoRII | CCWGG | 1 cut(s) | 859 |
| EcoRV | GATATC | 1 cut(s) | 355 |
| FaeI | CATG | 8 cut(s) | 51, 78, 785, 1393, 1441, 1552, 1630, 1825 |
| FatI | CATG | 8 cut(s) | 47, 74, 781, 1389, 1437, 1548, 1626, 1821 |
| FbaI | TGATCA | 1 cut(s) | 1498 |
| FblI | GTMKAC | 1 cut(s) | 399 |
| Fnu4HI | GCNGC | 2 cut(s) | 792, 891 |
| FokI | GGATG | 9 cut(s) | 396, 538, 557, 755, 1148, 1207, 1304, 1418, 1794 |
| Fsp4HI | GCNGC | 2 cut(s) | 792, 891 |
| FspBI | CTAG | 3 cut(s) | 519, 777, 1571 |
| FspI | TGCGCA | 1 cut(s) | 1767 |
| GlaI | GCGC | 1 cut(s) | 1767 |
| GluI | GCNGC | 2 cut(s) | 792, 891 |
| GsaI | CCCAGC | 1 cut(s) | 1735 |
| GsuI | CTGGAG | 1 cut(s) | 843 |
| HaeIII | GGCC | 3 cut(s) | 336, 1056, 1709 |
| HapII | CCGG | 3 cut(s) | 456, 1008, 1662 |
| HhaI | GCGC | 1 cut(s) | 1768 |
| Hin1II | CATG | 8 cut(s) | 51, 78, 785, 1393, 1441, 1552, 1630, 1825 |
| Hin6I | GCGC | 1 cut(s) | 1766 |
| HinP1I | GCGC | 1 cut(s) | 1766 |
| HincII | GTYRAC | 3 cut(s) | 81, 318, 1722 |
| HindII | GTYRAC | 3 cut(s) | 81, 318, 1722 |
| HindIII | AAGCTT | 1 cut(s) | 1423 |
| HpaI | GTTAAC | 1 cut(s) | 1722 |
| HpaII | CCGG | 3 cut(s) | 456, 1008, 1662 |
| HphI | GGTGA | 4 cut(s) | 1481, 1535, 1592, 1650 |
| Hpy166II | GTNNAC | 6 cut(s) | 81, 307, 318, 400, 491, 1722 |
| Hpy188III | TCNNGA | 3 cut(s) | 1149, 1237, 1571 |
| Hpy8I | GTNNAC | 6 cut(s) | 81, 307, 318, 400, 491, 1722 |
| HpyAV | CCTTC | 6 cut(s) | 206, 207, 347, 636, 1665, 1720 |
| HpyCH4III | ACNGT | 6 cut(s) | 85, 111, 154, 367, 919, 961 |
| HpyCH4IV | ACGT | 1 cut(s) | 1666 |
| HpyCH4V | TGCA | 8 cut(s) | 239, 302, 791, 885, 1080, 1267, 1536, 1700 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 53, 621, 1706 |
| HpyF3I | CTNAG | 4 cut(s) | 381, 638, 922, 1067 |
| HpySE526I | ACGT | 1 cut(s) | 1666 |
| Hsp92II | CATG | 8 cut(s) | 51, 78, 785, 1393, 1441, 1552, 1630, 1825 |
| HspAI | GCGC | 1 cut(s) | 1766 |
| KpnI | GGTACC | 2 cut(s) | 8, 1388 |
| Ksp22I | TGATCA | 1 cut(s) | 1498 |
| KspAI | GTTAAC | 1 cut(s) | 1722 |
| Kzo9I | GATC | 7 cut(s) | 250, 1010, 1233, 1486, 1498, 1506, 1825 |
| LmnI | GCTCC | 1 cut(s) | 215 |
| Lsp1109I | GCAGC | 2 cut(s) | 803, 877 |
| LweI | GCATC | 4 cut(s) | 516, 1126, 1622, 1824 |
| MaeI | CTAG | 3 cut(s) | 519, 777, 1571 |
| MaeII | ACGT | 1 cut(s) | 1666 |
| MaeIII | GTNAC | 4 cut(s) | 58, 85, 154, 1001 |
| MalI | GATC | 7 cut(s) | 252, 1012, 1235, 1488, 1500, 1508, 1827 |
| MbiI | CCGCTC | 1 cut(s) | 1373 |
| MboI | GATC | 7 cut(s) | 250, 1010, 1233, 1486, 1498, 1506, 1825 |
| MflI | RGATCY | 3 cut(s) | 250, 1010, 1825 |
| MlyI | GAGTC | 9 cut(s) | 13, 58, 192, 419, 446, 458, 464, 1352, 1807 |
| MmeI | TCCRAC | 8 cut(s) | 47, 53, 447, 492, 1332, 1752, 1776, 1835 |
| MroXI | GAANNNNTTC | 1 cut(s) | 633 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1314 |
| MspI | CCGG | 3 cut(s) | 456, 1008, 1662 |
| MspR9I | CCNGG | 2 cut(s) | 861, 1662 |
| Mva1269I | GAATGC | 2 cut(s) | 958, 1538 |
| MvaI | CCWGG | 1 cut(s) | 861 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 53, 621, 1706 |
| NciI | CCSGG | 1 cut(s) | 1662 |
| NdeII | GATC | 7 cut(s) | 250, 1010, 1233, 1486, 1498, 1506, 1825 |
| NheI | GCTAGC | 1 cut(s) | 776 |
| NlaIII | CATG | 8 cut(s) | 51, 78, 785, 1393, 1441, 1552, 1630, 1825 |
| NlaIV | GGNNCC | 6 cut(s) | 6, 252, 1012, 1055, 1386, 1827 |
| NmuCI | GTSAC | 1 cut(s) | 154 |
| NsbI | TGCGCA | 1 cut(s) | 1767 |
| NspV | TTCGAA | 1 cut(s) | 127 |
| PacI | TTAATTAA | 1 cut(s) | 549 |
| PceI | AGGCCT | 1 cut(s) | 1709 |
| PctI | GAATGC | 2 cut(s) | 958, 1538 |
| PdmI | GAANNNNTTC | 1 cut(s) | 633 |
| PfeI | GAWTC | 3 cut(s) | 975, 1219, 1357 |
| PkrI | GCNGC | 2 cut(s) | 793, 892 |
| PleI | GAGTC | 9 cut(s) | 13, 58, 191, 419, 446, 458, 464, 1351, 1807 |
| PpsI | GAGTC | 9 cut(s) | 13, 58, 191, 419, 446, 458, 464, 1351, 1807 |
| PshBI | ATTAAT | 1 cut(s) | 1758 |
| PsiI | TTATAA | 1 cut(s) | 653 |
| Psp6I | CCWGG | 1 cut(s) | 859 |
| PspFI | CCCAGC | 1 cut(s) | 1731 |
| PspGI | CCWGG | 1 cut(s) | 859 |
| PspN4I | GGNNCC | 6 cut(s) | 6, 252, 1012, 1055, 1386, 1827 |
| PspPI | GGNCC | 1 cut(s) | 1054 |
| PstNI | CAGNNNCTG | 1 cut(s) | 626 |
| PsuI | RGATCY | 3 cut(s) | 250, 1010, 1825 |
| RsaI | GTAC | 7 cut(s) | 6, 803, 1040, 1179, 1365, 1386, 1436 |
| RsaNI | GTAC | 7 cut(s) | 5, 802, 1039, 1178, 1364, 1385, 1435 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1314 |
| SatI | GCNGC | 2 cut(s) | 792, 891 |
| Sau3AI | GATC | 7 cut(s) | 250, 1010, 1233, 1486, 1498, 1506, 1825 |
| Sau96I | GGNCC | 1 cut(s) | 1054 |
| SchI | GAGTC | 9 cut(s) | 13, 58, 192, 419, 446, 458, 464, 1352, 1807 |
| ScrFI | CCNGG | 2 cut(s) | 861, 1662 |
| SfaNI | GCATC | 4 cut(s) | 516, 1126, 1622, 1824 |
| SfcI | CTRYAG | 3 cut(s) | 324, 813, 957 |
| SfuI | TTCGAA | 1 cut(s) | 127 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1314 |
| SmlI | CTYRAG | 1 cut(s) | 1703 |
| SmoI | CTYRAG | 1 cut(s) | 1703 |
| SseBI | AGGCCT | 1 cut(s) | 1709 |
| SsiI | CCGC | 4 cut(s) | 395, 729, 1139, 1373 |
| SspI | AATATT | 1 cut(s) | 1089 |
| SspMI | CTAG | 3 cut(s) | 519, 777, 1571 |
| StuI | AGGCCT | 1 cut(s) | 1709 |
| StyD4I | CCNGG | 2 cut(s) | 859, 1660 |
| TaaI | ACNGT | 6 cut(s) | 85, 111, 154, 367, 919, 961 |
| TaiI | ACGT | 1 cut(s) | 1669 |
| TaqI | TCGA | 8 cut(s) | 94, 127, 279, 340, 1602, 1689, 1713, 1816 |
| TatI | WGTACW | 3 cut(s) | 1038, 1177, 1434 |
| TfiI | GAWTC | 3 cut(s) | 975, 1219, 1357 |
| TscAI | CASTG | 3 cut(s) | 252, 309, 631 |
| TseFI | GTSAC | 1 cut(s) | 154 |
| TseI | GCWGC | 2 cut(s) | 791, 890 |
| Tsp45I | GTSAC | 1 cut(s) | 154 |
| TspDTI | ATGAA | 6 cut(s) | 218, 691, 1422, 1454, 1501, 1796 |
| TspGWI | ACGGA | 3 cut(s) | 177, 1003, 1204 |
| TspRI | CASTG | 3 cut(s) | 252, 309, 631 |
| VspI | ATTAAT | 1 cut(s) | 1758 |
| XapI | RAATTY | 4 cut(s) | 96, 629, 754, 1018 |
| XbaI | TCTAGA | 1 cut(s) | 1570 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 577 |
| XmiI | GTMKAC | 1 cut(s) | 399 |
| XmnI | GAANNNNTTC | 1 cut(s) | 633 |
| XspI | CTAG | 3 cut(s) | 519, 777, 1571 |