Rh2CG503000

N-acetylglucosaminyltransferase II (MGAT2)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Forward (+)
67457255 .. 67464408
7154 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG503000.1

Sequence Viewer

Length: 1053 bp
ATGACATATATACAGTTGGCCACTACAAAGTCAGTGAAGATTGAAGAGAAAGCTGTGGAATTAAGACGATCGAGAATTAATAAGAAGTATCGAGAAATGAAAATGTGGATGTCAAGTAATGGTCTCCCCGAGGATTTAAAGACAACAATTAGAGAATATATTAAAAAATCTAACGTAGCGGAGAAATACATAGATGCTCCAGTGAGTCTGAAAATTCTATACGGTTGTGCTGAAGAGGATGGAAGAGAGGATATTACAAATCCTATGGTCCAATATGTAACCGCGAAAGCGCTACAGAAAGTACCCATGTTTGAGAGTGTCGATGAAGAGGACTTGAAATATGCCTGCGAATTCTCGCGGTTGGATCCATCTATCTACCCCGAGAATAGCTACATTGTTCGAGCGGGTAAACGGTGTGATCGGGTCATCTTCATCATAGAAGGCGTAATTGAATTGACCGACACAACGTCCAACGGTGCTGAAACAACGGGTTCATCATCAACGATTAAGACCGAGCGTCTTGAGAAAGGTCAGTACTATGGACAAGAATTGTTGAATTGGGCAGTATTGAACTATGAGCGCGGCTATGACGACTGTAAGCACACTCGTCCTATTTGGACCCGAGATGTCAAATGTCGTACCGAAGTCGAAGCCCTCTGTATCGAGGACAAGGACTTATTAGATTTGCTACGACGTGTCAGACGGTACTACAACTGGAGGCAGAATAAGTGGGTGAAGCGGACACTTCCCCATGACAACACGGATGAGACATTAAACAAGACAAACTTGCAGCCGGCAACAACAGAATTGGAGGAGATTGAGGAGACAAAAAAGATGAAGATGAAGAACGTGGAATTAGATAAAGGTGGAGGAGAACCAAGGGAAGACATTGCGGATACGGGTGCATCTGCATCCACTACTGTTGAACAGATTATCCATCTTCAGGGTGAGATGCTTCGCGAGCAGCTGGTTCTAGCCCGACAGAATCGTGATGATATAGCCAGACTGGGACGAAAATTAGATGACATGGCTGTAATCTTAGCAACGTTGTGA

Protein Analysis

350

Amino Acids

40.51

Weight (kDa)

5.62

Isoelectric Point (pI)

50.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000491)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g12100 FvH4_3g12110 FvH4_3g12111 FvH4_3g12120 FvH4_3g12120 FvH4_3g28952 FvH4_6g40660 FvH4_6g40661 FvH4_6g40960
rosa_chinensis RchiOBHm_Chr1g0340941 RchiOBHm_Chr2g0156041 RchiOBHm_Chr2g0156591 RchiOBHm_Chr5g0019791 RchiOBHm_Chr5g0019821
rosa_laevigata RLG00000007998 RLG00000020883 RLG00000020887 RLG00000020922 RLG00000029052 RLG00000032473 RLG00000032474 RLG00000032477 RLG00000032478
rosa_multiflora Rmu_co8231441.1_g000001 Rmu_co8352639.1_g000001 Rmu_co8510723.1_g000001 Rmu_sc0000344.1_g000022 Rmu_sc0000344.1_g000023 Rmu_sc0001145.1_g000015 Rmu_sc0001145.1_g000016 Rmu_sc0001211.1_g000087 Rmu_sc0001319.1_g000003 Rmu_sc0008321.1_g000001 Rmu_sc0011512.1_g000007 Rmu_sc0011922.1_g000003 Rmu_sc0011922.1_g000007 Rmu_ssc0000155.1_g000002 Rmu_ssc0000155.1_g000004
rosa_roxburghii Rroxscaffold_1G00058320 Rroxscaffold_1G00058340 Rroxscaffold_2G00092930 Rroxscaffold_2G00093240 Rroxscaffold_2G00093270 Rroxscaffold_4G00311560 Rroxscaffold_4G00311590 Rroxscaffold_5G00360130
rosa_rugosa Rorug01G0160700.1 Rorug02G0451400 Rorug02G0454400 Rorug02G0454400 Rorug02G0454500 Rorug02G0454600 Rorug05G0054100 Rorug05G0054200 Rorug05G0054300
rosa_samantha Rh1AG175400 Rh1BG143700 Rh1BG143800 Rh1CG163400 Rh1DG175300 Rh1DG175400 Rh1DG175500 Rh2AG518200 Rh2AG518300 Rh2BG529400 Rh2BG532700 Rh2BG533200 Rh2CG502900 Rh2CG503000 Rh2DG538500 Rh2DG538600 Rh2DG541600 Rh2DG542000 Rh4BG200000 Rh4BG200100 Rh5AG144500 Rh5AG144600 Rh5AG366400 Rh5BG143500 Rh5BG143700 Rh5CG155000 Rh5CG155300 Rh5DG143500 Rh7BG257300 Rh7BG257400 Rh7BG257500
rosa_wichuraiana Rw1G014680 Rw2G042670 Rw2G042900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 404
AccII CGCG 4 cut(s) 284, 358, 582, 960
AciI CCGC 7 cut(s) 179, 282, 358, 404, 582, 739, 893
AclI AACGTT 1 cut(s) 1046
AclWI GGATC 2 cut(s) 359, 372
AcoI YGGCCR 1 cut(s) 18
AcsI RAATTY 2 cut(s) 213, 350
AcuI CTGAAG 2 cut(s) 252, 926
AfaI GTAC 4 cut(s) 303, 536, 640, 707
AfeI AGCGCT 1 cut(s) 291
AfiI CCNNNNNNNGG 1 cut(s) 943
AflIII ACRYGT 1 cut(s) 694
AgsI TTSAA 6 cut(s) 44, 337, 452, 556, 571, 926
AhdI GACNNNNNGTC 2 cut(s) 466, 516
AjiI CACGTC 1 cut(s) 695
AloI GAACNNNNNNTCC 2 cut(s) 918, 950
AluBI AGCT 3 cut(s) 53, 390, 967
AluI AGCT 3 cut(s) 53, 390, 967
Alw26I GTCTC 3 cut(s) 128, 761, 818
AlwI GGATC 2 cut(s) 359, 372
Ama87I CYCGRG 3 cut(s) 128, 380, 621
Aor51HI AGCGCT 1 cut(s) 291
AoxI GGCC 1 cut(s) 18
ApeKI GCWGC 2 cut(s) 790, 964
ApoI RAATTY 2 cut(s) 213, 350
AseI ATTAAT 1 cut(s) 78
AspLEI GCGC 2 cut(s) 292, 582
AspS9I GGNCC 2 cut(s) 268, 618
AsuHPI GGTGA 2 cut(s) 745, 959
AvaI CYCGRG 3 cut(s) 128, 380, 621
AvaII GGWCC 2 cut(s) 268, 618
BalI TGGCCA 1 cut(s) 20
BamHI GGATCC 1 cut(s) 364
BbsI GAAGAC 1 cut(s) 891
BbvI GCAGC 2 cut(s) 802, 976
BccI CCATC 3 cut(s) 233, 376, 945
BciVI GTATCC 1 cut(s) 889
BcoDI GTCTC 3 cut(s) 128, 761, 818
BfaI CTAG 1 cut(s) 974
BfmI CTRYAG 1 cut(s) 293
BfoI RGCGCY 1 cut(s) 293
BfuI GTATCC 1 cut(s) 889
BisI GCNGC 3 cut(s) 583, 791, 965
BlsI GCNGC 3 cut(s) 584, 792, 966
BmcAI AGTACT 1 cut(s) 536
Bme18I GGWCC 2 cut(s) 268, 618
BmeRI GACNNNNNGTC 2 cut(s) 466, 516
BmeT110I CYCGRG 3 cut(s) 128, 380, 621
BmgBI CACGTC 1 cut(s) 695
BmgT120I GGNCC 2 cut(s) 268, 618
BmiI GGNNCC 2 cut(s) 366, 620
BmrI ACTGGG 1 cut(s) 1016
BmsI GCATC 4 cut(s) 184, 914, 920, 942
BmuI ACTGGG 1 cut(s) 1016
BpiI GAAGAC 1 cut(s) 891
BpmI CTGGAG 2 cut(s) 183, 736
BpuEI CTTGAG 1 cut(s) 542
BsaI GGTCTC 1 cut(s) 128
BsaJI CCNNGG 2 cut(s) 129, 878
Bsc4I CCNNNNNNNGG 1 cut(s) 943
Bse118I RCCGGY 1 cut(s) 793
Bse1I ACTGG 3 cut(s) 200, 719, 1011
Bse3DI GCAATG 1 cut(s) 888
BseDI CCNNGG 2 cut(s) 129, 878
BseGI GGATG 4 cut(s) 114, 244, 769, 911
BseLI CCNNNNNNNGG 1 cut(s) 943
BseMI GCAATG 1 cut(s) 888
BseNI ACTGG 3 cut(s) 200, 719, 1011
BseRI GAGGAG 3 cut(s) 827, 836, 885
BseXI GCAGC 2 cut(s) 802, 976
Bsh1236I CGCG 4 cut(s) 284, 358, 582, 960
Bsh1285I CGRYCG 1 cut(s) 71
BshFI GGCC 1 cut(s) 20
BsiEI CGRYCG 1 cut(s) 71
BsiHKCI CYCGRG 3 cut(s) 128, 380, 621
BsiSI CCGG 1 cut(s) 794
BslFI GGGAC 1 cut(s) 1023
BslI CCNNNNNNNGG 1 cut(s) 943
BsmAI GTCTC 3 cut(s) 128, 761, 818
BsmFI GGGAC 1 cut(s) 1023
BsnI GGCC 1 cut(s) 20
Bso31I GGTCTC 1 cut(s) 128
BsoBI CYCGRG 3 cut(s) 128, 380, 621
Bsp143I GATC 3 cut(s) 68, 364, 418
Bsp68I TCGCGA 1 cut(s) 960
BspACI CCGC 7 cut(s) 179, 282, 358, 404, 582, 739, 893
BspANI GGCC 1 cut(s) 20
BspFNI CGCG 4 cut(s) 284, 358, 582, 960
BspLI GGNNCC 2 cut(s) 366, 620
BspPI GGATC 2 cut(s) 359, 372
BspTNI GGTCTC 1 cut(s) 128
BsrBI CCGCTC 1 cut(s) 404
BsrDI GCAATG 1 cut(s) 888
BsrFI RCCGGY 1 cut(s) 793
BsrI ACTGG 3 cut(s) 200, 719, 1011
BssAI RCCGGY 1 cut(s) 793
BssECI CCNNGG 2 cut(s) 129, 878
BssMI GATC 3 cut(s) 68, 364, 418
BssT1I CCWWGG 1 cut(s) 878
Bst4CI ACNGT 7 cut(s) 15, 224, 414, 476, 596, 705, 922
Bst6I CTCTTC 4 cut(s) 39, 228, 238, 321
BstC8I GCNNGC 3 cut(s) 346, 795, 962
BstDEI CTNAG 1 cut(s) 1039
BstF5I GGATG 4 cut(s) 114, 244, 769, 911
BstFNI CGCG 4 cut(s) 284, 358, 582, 960
BstH2I RGCGCY 1 cut(s) 293
BstHHI GCGC 2 cut(s) 292, 582
BstKTI GATC 3 cut(s) 71, 367, 421
BstMAI GTCTC 3 cut(s) 128, 761, 818
BstMBI GATC 3 cut(s) 68, 364, 418
BstMCI CGRYCG 1 cut(s) 71
BstMWI GCNNNNNNNGC 1 cut(s) 961
BstSFI CTRYAG 1 cut(s) 293
BstUI CGCG 4 cut(s) 284, 358, 582, 960
BstV1I GCAGC 2 cut(s) 802, 976
BstV2I GAAGAC 1 cut(s) 891
BstX2I RGATCY 1 cut(s) 364
BstYI RGATCY 1 cut(s) 364
BsuI GTATCC 1 cut(s) 889
BsuRI GGCC 1 cut(s) 20
BtrI CACGTC 1 cut(s) 695
BtsCI GGATG 4 cut(s) 114, 244, 769, 911
BtsIMutI CAGTG 2 cut(s) 39, 207
BtuMI TCGCGA 1 cut(s) 960
Cac8I GCNNGC 3 cut(s) 346, 795, 962
CfoI GCGC 2 cut(s) 292, 582
Cfr10I RCCGGY 1 cut(s) 793
Cfr13I GGNCC 2 cut(s) 268, 618
CseI GACGC 1 cut(s) 506
Csp6I GTAC 4 cut(s) 302, 535, 639, 706
CspCI CAANNNNNGTGG 2 cut(s) 904, 939
CviAII CATG 3 cut(s) 307, 752, 1027
CviQI GTAC 4 cut(s) 302, 535, 639, 706
DdeI CTNAG 1 cut(s) 1039
DpnI GATC 3 cut(s) 70, 366, 420
DpnII GATC 3 cut(s) 68, 364, 418
DraI TTTAAA 1 cut(s) 138
DriI GACNNNNNGTC 2 cut(s) 466, 516
EaeI YGGCCR 1 cut(s) 18
Eam1104I CTCTTC 4 cut(s) 39, 228, 238, 321
Eam1105I GACNNNNNGTC 2 cut(s) 466, 516
EarI CTCTTC 4 cut(s) 39, 228, 238, 321
Eco130I CCWWGG 1 cut(s) 878
Eco31I GGTCTC 1 cut(s) 128
Eco47I GGWCC 2 cut(s) 268, 618
Eco47III AGCGCT 1 cut(s) 291
Eco57I CTGAAG 2 cut(s) 252, 926
Eco88I CYCGRG 3 cut(s) 128, 380, 621
EcoRI GAATTC 1 cut(s) 350
EcoT14I CCWWGG 1 cut(s) 878
ErhI CCWWGG 1 cut(s) 878
FaeI CATG 3 cut(s) 310, 755, 1030
FalI AAGNNNNNCTT 2 cut(s) 770, 802
FaqI GGGAC 1 cut(s) 1023
FatI CATG 3 cut(s) 306, 751, 1026
FauI CCCGC 1 cut(s) 397
Fnu4HI GCNGC 3 cut(s) 583, 791, 965
FokI GGATG 4 cut(s) 121, 251, 776, 898
Fsp4HI GCNGC 3 cut(s) 583, 791, 965
FspBI CTAG 1 cut(s) 974
GlaI GCGC 2 cut(s) 291, 581
GluI GCNGC 3 cut(s) 583, 791, 965
GsuI CTGGAG 2 cut(s) 183, 736
HaeII RGCGCY 1 cut(s) 293
HaeIII GGCC 1 cut(s) 20
HapII CCGG 1 cut(s) 794
HgaI GACGC 1 cut(s) 506
HhaI GCGC 2 cut(s) 292, 582
Hin1II CATG 3 cut(s) 310, 755, 1030
Hin6I GCGC 2 cut(s) 290, 580
HinP1I GCGC 2 cut(s) 290, 580
HinfI GANTC 2 cut(s) 205, 985
HpaII CCGG 1 cut(s) 794
HphI GGTGA 2 cut(s) 745, 959
Hpy166II GTNNAC 1 cut(s) 410
Hpy188I TCNGA 2 cut(s) 210, 701
Hpy188III TCNNGA 5 cut(s) 72, 92, 521, 959, 989
Hpy8I GTNNAC 1 cut(s) 410
Hpy99I CGWCG 1 cut(s) 696
HpyAV CCTTC 1 cut(s) 434
HpyCH4III ACNGT 7 cut(s) 15, 224, 414, 476, 596, 705, 922
HpyCH4IV ACGT 5 cut(s) 174, 467, 694, 849, 1046
HpyCH4V TGCA 3 cut(s) 790, 905, 911
HpyF10VI GCNNNNNNNGC 1 cut(s) 961
HpyF3I CTNAG 1 cut(s) 1039
HpySE526I ACGT 5 cut(s) 174, 467, 694, 849, 1046
Hsp92II CATG 3 cut(s) 310, 755, 1030
HspAI GCGC 2 cut(s) 290, 580
KroI GCCGGC 1 cut(s) 793
KroNI GCCGGC 1 cut(s) 795
Kzo9I GATC 3 cut(s) 68, 364, 418
LmnI GCTCC 1 cut(s) 202
LpnPI CCDG 8 cut(s) 213, 358, 700, 807, 929, 953, 992, 1015
Lsp1109I GCAGC 2 cut(s) 802, 976
LweI GCATC 4 cut(s) 184, 914, 920, 942
MaeI CTAG 1 cut(s) 974
MaeII ACGT 5 cut(s) 174, 467, 694, 849, 1046
MaeIII GTNAC 1 cut(s) 277
MalI GATC 3 cut(s) 70, 366, 420
MbiI CCGCTC 1 cut(s) 404
MboI GATC 3 cut(s) 68, 364, 418
MflI RGATCY 1 cut(s) 364
MlsI TGGCCA 1 cut(s) 20
MluNI TGGCCA 1 cut(s) 20
MlyI GAGTC 1 cut(s) 214
MmeI TCCRAC 2 cut(s) 342, 495
Mox20I TGGCCA 1 cut(s) 20
MroNI GCCGGC 1 cut(s) 793
MscI TGGCCA 1 cut(s) 20
MseI TTAA 6 cut(s) 62, 78, 137, 162, 507, 773
Msp20I TGGCCA 1 cut(s) 20
MspA1I CMGCKG 1 cut(s) 967
MspI CCGG 1 cut(s) 794
MvnI CGCG 4 cut(s) 284, 358, 582, 960
MwoI GCNNNNNNNGC 1 cut(s) 961
NaeI GCCGGC 1 cut(s) 795
NdeII GATC 3 cut(s) 68, 364, 418
NgoMIV GCCGGC 1 cut(s) 793
NlaIII CATG 3 cut(s) 310, 755, 1030
NlaIV GGNNCC 2 cut(s) 366, 620
NruI TCGCGA 1 cut(s) 960
PdiI GCCGGC 1 cut(s) 795
PfeI GAWTC 1 cut(s) 985
PkrI GCNGC 3 cut(s) 584, 792, 966
Ple19I CGATCG 1 cut(s) 71
PleI GAGTC 1 cut(s) 213
PpsI GAGTC 1 cut(s) 213
PshBI ATTAAT 1 cut(s) 78
Psp1406I AACGTT 1 cut(s) 1046
PspN4I GGNNCC 2 cut(s) 366, 620
PspPI GGNCC 2 cut(s) 268, 618
PsuI RGATCY 1 cut(s) 364
PvuI CGATCG 1 cut(s) 71
PvuII CAGCTG 1 cut(s) 967
RruI TCGCGA 1 cut(s) 960
RsaI GTAC 4 cut(s) 303, 536, 640, 707
RsaNI GTAC 4 cut(s) 302, 535, 639, 706
SaqAI TTAA 6 cut(s) 62, 78, 137, 162, 507, 773
SatI GCNGC 3 cut(s) 583, 791, 965
Sau3AI GATC 3 cut(s) 68, 364, 418
Sau96I GGNCC 2 cut(s) 268, 618
ScaI AGTACT 1 cut(s) 536
SchI GAGTC 1 cut(s) 214
SfaNI GCATC 4 cut(s) 184, 914, 920, 942
SfcI CTRYAG 1 cut(s) 293
SinI GGWCC 2 cut(s) 268, 618
SmlI CTYRAG 1 cut(s) 521
SmoI CTYRAG 1 cut(s) 521
SsiI CCGC 7 cut(s) 179, 282, 358, 404, 582, 739, 893
SspMI CTAG 1 cut(s) 974
StyI CCWWGG 1 cut(s) 878
TaaI ACNGT 7 cut(s) 15, 224, 414, 476, 596, 705, 922
TaiI ACGT 5 cut(s) 177, 470, 697, 852, 1049
TaqI TCGA 6 cut(s) 71, 91, 321, 400, 648, 663
TaqII GACCGA 2 cut(s) 473, 527
TatI WGTACW 1 cut(s) 534
TauI GCSGC 1 cut(s) 585
TfiI GAWTC 1 cut(s) 985
Tru1I TTAA 6 cut(s) 62, 78, 137, 162, 507, 773
Tru9I TTAA 6 cut(s) 62, 78, 137, 162, 507, 773
TscAI CASTG 2 cut(s) 39, 207
TseI GCWGC 2 cut(s) 790, 964
TspDTI ATGAA 6 cut(s) 113, 339, 421, 483, 851, 857
TspGWI ACGGA 1 cut(s) 776
TspRI CASTG 2 cut(s) 39, 207
VpaK11BI GGWCC 2 cut(s) 268, 618
VspI ATTAAT 1 cut(s) 78
XapI RAATTY 2 cut(s) 213, 350
XspI CTAG 1 cut(s) 974
ZrmI AGTACT 1 cut(s) 536
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.