Rh7BG257300

N-acetylglucosaminyltransferase II (MGAT2)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Forward (+)
23443224 .. 23447794
4571 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG257300.1

Sequence Viewer

Length: 420 bp
ATGAAGATTGAAGAGAAAGCCGAGGAATTAAGACGAACAAAAATTAATAAGAAGTATCAAGAAATGAAAATGTGGATGTCAAATAATGGTCTCCCCGAGGATTTAAAGACAACAATCAGGGAATGTATTAAACAATATAACCTAGCGGAGAAATACATAGATGCTCCAGTGGATCTGAAATTTCTAAAAAGTGTTCTTCCATATTCTGGTCGAGTACCTATGGTGGATTGGCTAAAAGTGAACGCGCTAAAGAAAGTACCCATGATTGAGAGTGTCGATGAAAGTAAGTTGAAAGATGTCTGCTATTTATTGGATCTAGATACCTACACCGAGAATAGGTACATTCTTCGGGCGGGTGAACAGTGTCGTTTGGTTGGTGGAGGAGGCTGGAATGCGCAGGCTGTAGGTTACAGCCACTGA

Protein Analysis

139

Amino Acids

16.14

Weight (kDa)

8.67

Isoelectric Point (pI)

47.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000491)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g12100 FvH4_3g12110 FvH4_3g12111 FvH4_3g12120 FvH4_3g12120 FvH4_3g28952 FvH4_6g40660 FvH4_6g40661 FvH4_6g40960
rosa_chinensis RchiOBHm_Chr1g0340941 RchiOBHm_Chr2g0156041 RchiOBHm_Chr2g0156591 RchiOBHm_Chr5g0019791 RchiOBHm_Chr5g0019821
rosa_laevigata RLG00000007998 RLG00000020883 RLG00000020887 RLG00000020922 RLG00000029052 RLG00000032473 RLG00000032474 RLG00000032477 RLG00000032478
rosa_multiflora Rmu_co8231441.1_g000001 Rmu_co8352639.1_g000001 Rmu_co8510723.1_g000001 Rmu_sc0000344.1_g000022 Rmu_sc0000344.1_g000023 Rmu_sc0001145.1_g000015 Rmu_sc0001145.1_g000016 Rmu_sc0001211.1_g000087 Rmu_sc0001319.1_g000003 Rmu_sc0008321.1_g000001 Rmu_sc0011512.1_g000007 Rmu_sc0011922.1_g000003 Rmu_sc0011922.1_g000007 Rmu_ssc0000155.1_g000002 Rmu_ssc0000155.1_g000004
rosa_roxburghii Rroxscaffold_1G00058320 Rroxscaffold_1G00058340 Rroxscaffold_2G00092930 Rroxscaffold_2G00093240 Rroxscaffold_2G00093270 Rroxscaffold_4G00311560 Rroxscaffold_4G00311590 Rroxscaffold_5G00360130
rosa_rugosa Rorug01G0160700.1 Rorug02G0451400 Rorug02G0454400 Rorug02G0454400 Rorug02G0454500 Rorug02G0454600 Rorug05G0054100 Rorug05G0054200 Rorug05G0054300
rosa_samantha Rh1AG175400 Rh1BG143700 Rh1BG143800 Rh1CG163400 Rh1DG175300 Rh1DG175400 Rh1DG175500 Rh2AG518200 Rh2AG518300 Rh2BG529400 Rh2BG532700 Rh2BG533200 Rh2CG502900 Rh2CG503000 Rh2DG538500 Rh2DG538600 Rh2DG541600 Rh2DG542000 Rh4BG200000 Rh4BG200100 Rh5AG144500 Rh5AG144600 Rh5AG366400 Rh5BG143500 Rh5BG143700 Rh5CG155000 Rh5CG155300 Rh5DG143500 Rh7BG257300 Rh7BG257400 Rh7BG257500
rosa_wichuraiana Rw1G014680 Rw2G042670 Rw2G042900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 396
AccB7I CCANNNNNTGG 1 cut(s) 206
AccII CGCG 1 cut(s) 245
AciI CCGC 2 cut(s) 146, 353
AclWI GGATC 2 cut(s) 180, 321
AcsI RAATTY 1 cut(s) 179
AfaI GTAC 3 cut(s) 216, 258, 341
AfiI CCNNNNNNNGG 2 cut(s) 206, 336
AgsI TTSAA 2 cut(s) 11, 292
Alw26I GTCTC 1 cut(s) 95
AlwI GGATC 2 cut(s) 180, 321
AlwNI CAGNNNCTG 1 cut(s) 417
Ama87I CYCGRG 1 cut(s) 95
ApoI RAATTY 1 cut(s) 179
AseI ATTAAT 1 cut(s) 45
AspLEI GCGC 2 cut(s) 247, 397
AsuHPI GGTGA 1 cut(s) 368
AvaI CYCGRG 1 cut(s) 95
BcoDI GTCTC 1 cut(s) 95
BfaI CTAG 2 cut(s) 143, 317
BfmI CTRYAG 1 cut(s) 402
BmeT110I CYCGRG 1 cut(s) 95
BmsI GCATC 1 cut(s) 151
BpmI CTGGAG 1 cut(s) 150
BsaI GGTCTC 1 cut(s) 95
BsaJI CCNNGG 2 cut(s) 21, 96
Bsc4I CCNNNNNNNGG 2 cut(s) 206, 336
Bse1I ACTGG 1 cut(s) 167
BseDI CCNNGG 2 cut(s) 21, 96
BseGI GGATG 1 cut(s) 81
BseLI CCNNNNNNNGG 2 cut(s) 206, 336
BseNI ACTGG 1 cut(s) 167
BseRI GAGGAG 1 cut(s) 396
Bsh1236I CGCG 1 cut(s) 245
BsiHKCI CYCGRG 1 cut(s) 95
BslI CCNNNNNNNGG 2 cut(s) 206, 336
BsmAI GTCTC 1 cut(s) 95
BsmI GAATGC 1 cut(s) 397
Bso31I GGTCTC 1 cut(s) 95
BsoBI CYCGRG 1 cut(s) 95
Bsp143I GATC 2 cut(s) 172, 313
BspACI CCGC 2 cut(s) 146, 353
BspFNI CGCG 1 cut(s) 245
BspPI GGATC 2 cut(s) 180, 321
BspTNI GGTCTC 1 cut(s) 95
BsrI ACTGG 1 cut(s) 167
BssECI CCNNGG 2 cut(s) 21, 96
BssMI GATC 2 cut(s) 172, 313
Bst4CI ACNGT 1 cut(s) 363
Bst6I CTCTTC 1 cut(s) 6
BstC8I GCNNGC 1 cut(s) 399
BstF5I GGATG 1 cut(s) 81
BstFNI CGCG 1 cut(s) 245
BstHHI GCGC 2 cut(s) 247, 397
BstKTI GATC 2 cut(s) 175, 316
BstMAI GTCTC 1 cut(s) 95
BstMBI GATC 2 cut(s) 172, 313
BstSFI CTRYAG 1 cut(s) 402
BstUI CGCG 1 cut(s) 245
BstX2I RGATCY 2 cut(s) 172, 313
BstYI RGATCY 2 cut(s) 172, 313
BtsCI GGATG 1 cut(s) 81
BtsIMutI CAGTG 3 cut(s) 174, 368, 415
Cac8I GCNNGC 1 cut(s) 399
CaiI CAGNNNCTG 1 cut(s) 417
CfoI GCGC 2 cut(s) 247, 397
Csp6I GTAC 3 cut(s) 215, 257, 340
CviAII CATG 1 cut(s) 262
CviJI RGCY 5 cut(s) 20, 232, 387, 401, 414
CviKI_1 RGCY 5 cut(s) 20, 232, 387, 401, 414
CviQI GTAC 3 cut(s) 215, 257, 340
DpnI GATC 2 cut(s) 174, 315
DpnII GATC 2 cut(s) 172, 313
DraI TTTAAA 1 cut(s) 105
Eam1104I CTCTTC 1 cut(s) 6
EarI CTCTTC 1 cut(s) 6
Eco31I GGTCTC 1 cut(s) 95
Eco88I CYCGRG 1 cut(s) 95
FaeI CATG 1 cut(s) 265
FaiI YATR 5 cut(s) 138, 158, 202, 221, 263
FatI CATG 1 cut(s) 261
FauI CCCGC 1 cut(s) 346
FokI GGATG 1 cut(s) 88
FspBI CTAG 2 cut(s) 143, 317
FspI TGCGCA 1 cut(s) 396
GlaI GCGC 2 cut(s) 246, 396
GsuI CTGGAG 1 cut(s) 150
HhaI GCGC 2 cut(s) 247, 397
Hin1II CATG 1 cut(s) 265
Hin6I GCGC 2 cut(s) 245, 395
HinP1I GCGC 2 cut(s) 245, 395
HphI GGTGA 1 cut(s) 368
Hpy166II GTNNAC 2 cut(s) 241, 359
Hpy188I TCNGA 1 cut(s) 177
Hpy188III TCNNGA 2 cut(s) 59, 317
Hpy8I GTNNAC 2 cut(s) 241, 359
HpyCH4III ACNGT 1 cut(s) 363
Hsp92II CATG 1 cut(s) 265
HspAI GCGC 2 cut(s) 245, 395
Kzo9I GATC 2 cut(s) 172, 313
LmnI GCTCC 1 cut(s) 169
LpnPI CCDG 5 cut(s) 103, 180, 192, 373, 383
LweI GCATC 1 cut(s) 151
MaeI CTAG 2 cut(s) 143, 317
MaeIII GTNAC 1 cut(s) 407
MalI GATC 2 cut(s) 174, 315
MboI GATC 2 cut(s) 172, 313
MboII GAAGA 4 cut(s) 16, 23, 188, 338
MflI RGATCY 2 cut(s) 172, 313
MluCI AATT 3 cut(s) 26, 42, 179
MnlI CCTC 4 cut(s) 16, 91, 374, 377
MseI TTAA 4 cut(s) 29, 45, 104, 129
Mva1269I GAATGC 1 cut(s) 397
MvnI CGCG 1 cut(s) 245
NdeII GATC 2 cut(s) 172, 313
NlaIII CATG 1 cut(s) 265
NmeAIII GCCGAG 1 cut(s) 46
NsbI TGCGCA 1 cut(s) 396
PctI GAATGC 1 cut(s) 397
PflMI CCANNNNNTGG 1 cut(s) 206
PshBI ATTAAT 1 cut(s) 45
PstNI CAGNNNCTG 1 cut(s) 417
PsuI RGATCY 2 cut(s) 172, 313
RsaI GTAC 3 cut(s) 216, 258, 341
RsaNI GTAC 3 cut(s) 215, 257, 340
SaqAI TTAA 4 cut(s) 29, 45, 104, 129
Sau3AI GATC 2 cut(s) 172, 313
SetI ASST 5 cut(s) 144, 220, 326, 341, 409
SfaNI GCATC 1 cut(s) 151
SfcI CTRYAG 1 cut(s) 402
Sse9I AATT 3 cut(s) 26, 42, 179
SsiI CCGC 2 cut(s) 146, 353
SspMI CTAG 2 cut(s) 143, 317
TaaI ACNGT 1 cut(s) 363
TaqI TCGA 2 cut(s) 211, 276
TasI AATT 3 cut(s) 26, 42, 179
Tru1I TTAA 4 cut(s) 29, 45, 104, 129
Tru9I TTAA 4 cut(s) 29, 45, 104, 129
TscAI CASTG 2 cut(s) 174, 368
TspDTI ATGAA 3 cut(s) 17, 80, 294
TspRI CASTG 2 cut(s) 174, 368
Van91I CCANNNNNTGG 1 cut(s) 206
VspI ATTAAT 1 cut(s) 45
XapI RAATTY 1 cut(s) 179
XbaI TCTAGA 1 cut(s) 316
XspI CTAG 2 cut(s) 143, 317
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.