RLG00000020883

N-acetylglucosaminyltransferase II (MGAT2)

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
69799194 .. 69800508
1315 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020883

Sequence Viewer

Length: 780 bp
ATGGAAAACCAACAGGGCGAAAGCGTCGTCGTAAGCCTTCCATCGTCACTAGGTTGCTGTTCGGAGAGGTCAGCAGCTACAGCTTCGATTAGAAAATTGTGGTCAACAGTTACTTATCTAATTAGACAACTATGGTCAACCGTTATTTATCCAATTGGACAATGTGGCTGGGCACTGATATTTACTCGCAGTTGGGATATATGTGAAGCCAGTGAAGGTATCTTTGACGAAGGGTTATCTCCAATAGGCTACATTATACTTGGGATTATAGTTGGGACTGTATGTCTGGGACGTATAATTCTTTCACCCATCAAATATACATGGAAACTGCTAAGAAGGAAGGCGATTCTGACATGTATTGCAGTGTCGTTGGATCCTTTCTTCTTTTATATTCCAATCATCAATCAGGAAAACAAGTGTCTTGGAGTCGACAAAAAACTGAGGAATACATTTCTTGTGTTGCGATCAGTGACGGATTTTGCTAGTGTATTGCATATTGTATCTCAAGTTCGGGGTTGGACCATCGACCAACACCCCGACTCCCACACGGACACCGAATCCTACTTTGACTCTGAAGCCAGGCCGACATCATCTCTGTTGCAAAAACTGATGAAGTCCATAGTAGAGGCAATAAATGGGAGCATGCCTTGGTTATCTCTCTCTCTCGTGATTGATTTTCTTGCTCTTCTTCCAATTCCGCAGGTGGCAATAGTAGTTATCTTCTTCAAAATGGGGGCTCTAAATTTTTCCTTCAAAGAACGATTCTCAATGTCCTTCTAA

Protein Analysis

260

Amino Acids

29.06

Weight (kDa)

8.14

Isoelectric Point (pI)

41.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000491)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g12100 FvH4_3g12110 FvH4_3g12111 FvH4_3g12120 FvH4_3g12120 FvH4_3g28952 FvH4_6g40660 FvH4_6g40661 FvH4_6g40960
rosa_chinensis RchiOBHm_Chr1g0340941 RchiOBHm_Chr2g0156041 RchiOBHm_Chr2g0156591 RchiOBHm_Chr5g0019791 RchiOBHm_Chr5g0019821
rosa_laevigata RLG00000007998 RLG00000020883 RLG00000020887 RLG00000020922 RLG00000029052 RLG00000032473 RLG00000032474 RLG00000032477 RLG00000032478
rosa_multiflora Rmu_co8231441.1_g000001 Rmu_co8352639.1_g000001 Rmu_co8510723.1_g000001 Rmu_sc0000344.1_g000022 Rmu_sc0000344.1_g000023 Rmu_sc0001145.1_g000015 Rmu_sc0001145.1_g000016 Rmu_sc0001211.1_g000087 Rmu_sc0001319.1_g000003 Rmu_sc0008321.1_g000001 Rmu_sc0011512.1_g000007 Rmu_sc0011922.1_g000003 Rmu_sc0011922.1_g000007 Rmu_ssc0000155.1_g000002 Rmu_ssc0000155.1_g000004
rosa_roxburghii Rroxscaffold_1G00058320 Rroxscaffold_1G00058340 Rroxscaffold_2G00092930 Rroxscaffold_2G00093240 Rroxscaffold_2G00093270 Rroxscaffold_4G00311560 Rroxscaffold_4G00311590 Rroxscaffold_5G00360130
rosa_rugosa Rorug01G0160700.1 Rorug02G0451400 Rorug02G0454400 Rorug02G0454400 Rorug02G0454500 Rorug02G0454600 Rorug05G0054100 Rorug05G0054200 Rorug05G0054300
rosa_samantha Rh1AG175400 Rh1BG143700 Rh1BG143800 Rh1CG163400 Rh1DG175300 Rh1DG175400 Rh1DG175500 Rh2AG518200 Rh2AG518300 Rh2BG529400 Rh2BG532700 Rh2BG533200 Rh2CG502900 Rh2CG503000 Rh2DG538500 Rh2DG538600 Rh2DG541600 Rh2DG542000 Rh4BG200000 Rh4BG200100 Rh5AG144500 Rh5AG144600 Rh5AG366400 Rh5BG143500 Rh5BG143700 Rh5CG155000 Rh5CG155300 Rh5DG143500 Rh7BG257300 Rh7BG257400 Rh7BG257500
rosa_wichuraiana Rw1G014680 Rw2G042670 Rw2G042900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 691
Acc36I ACCTGC 1 cut(s) 691
AccI GTMKAC 1 cut(s) 429
AciI CCGC 1 cut(s) 698
AclWI GGATC 2 cut(s) 368, 381
AcsI RAATTY 1 cut(s) 742
AcuI CTGAAG 1 cut(s) 594
AflIII ACRYGT 1 cut(s) 353
AgsI TTSAA 2 cut(s) 727, 754
AhdI GACNNNNNGTC 1 cut(s) 282
AjnI CCWGG 1 cut(s) 578
AluBI AGCT 2 cut(s) 77, 83
AluI AGCT 2 cut(s) 77, 83
AlwI GGATC 2 cut(s) 368, 381
AoxI GGCC 1 cut(s) 581
ApeKI GCWGC 1 cut(s) 74
ApoI RAATTY 1 cut(s) 742
ArsI GACNNNNNNTTYG 2 cut(s) 12, 44
AspS9I GGNCC 1 cut(s) 519
AsuHPI GGTGA 1 cut(s) 297
AvaII GGWCC 1 cut(s) 519
BaeGI GKGCMC 1 cut(s) 175
BamHI GGATCC 1 cut(s) 373
BanII GRGCYC 1 cut(s) 739
BauI CACGAG 1 cut(s) 665
BbvI GCAGC 1 cut(s) 86
BccI CCATC 3 cut(s) 49, 317, 530
BciT130I CCWGG 1 cut(s) 580
BfaI CTAG 2 cut(s) 50, 483
BfmI CTRYAG 1 cut(s) 78
BfuAI ACCTGC 1 cut(s) 691
BisI GCNGC 1 cut(s) 75
BlsI GCNGC 1 cut(s) 76
Bme1390I CCNGG 1 cut(s) 580
Bme18I GGWCC 1 cut(s) 519
BmeRI GACNNNNNGTC 1 cut(s) 282
BmgT120I GGNCC 1 cut(s) 519
BmiI GGNNCC 1 cut(s) 375
BmrFI CCNGG 1 cut(s) 580
BpuEI CTTGAG 1 cut(s) 489
BsaJI CCNNGG 1 cut(s) 647
BsaXI ACNNNNNCTCC 2 cut(s) 524, 554
Bse1I ACTGG 1 cut(s) 210
BseBI CCWGG 1 cut(s) 580
BseDI CCNNGG 1 cut(s) 647
BseMII CTCAG 1 cut(s) 431
BseNI ACTGG 1 cut(s) 210
BseSI GKGCMC 1 cut(s) 175
BseXI GCAGC 1 cut(s) 86
BseYI CCCAGC 1 cut(s) 168
BshFI GGCC 1 cut(s) 583
BslFI GGGAC 2 cut(s) 289, 303
BsmFI GGGAC 2 cut(s) 289, 303
BsnI GGCC 1 cut(s) 583
Bsp1286I GDGCHC 2 cut(s) 175, 739
Bsp143I GATC 2 cut(s) 373, 464
BspACI CCGC 1 cut(s) 698
BspANI GGCC 1 cut(s) 583
BspCNI CTCAG 1 cut(s) 432
BspLI GGNNCC 1 cut(s) 375
BspMI ACCTGC 1 cut(s) 691
BspPI GGATC 2 cut(s) 368, 381
BspQI GCTCTTC 1 cut(s) 690
BsrI ACTGG 1 cut(s) 210
BssECI CCNNGG 1 cut(s) 647
BssMI GATC 2 cut(s) 373, 464
BssSI CACGAG 1 cut(s) 665
BssT1I CCWWGG 1 cut(s) 647
Bst2BI CACGAG 1 cut(s) 665
Bst2UI CCWGG 1 cut(s) 580
Bst4CI ACNGT 3 cut(s) 109, 142, 280
Bst6I CTCTTC 1 cut(s) 690
BstC8I GCNNGC 1 cut(s) 644
BstDEI CTNAG 2 cut(s) 332, 440
BstKTI GATC 2 cut(s) 376, 467
BstMBI GATC 2 cut(s) 373, 464
BstMWI GCNNNNNNNGC 1 cut(s) 80
BstNI CCWGG 1 cut(s) 580
BstNSI RCATGY 2 cut(s) 357, 646
BstSCI CCNGG 1 cut(s) 578
BstSFI CTRYAG 1 cut(s) 78
BstSLI GKGCMC 1 cut(s) 175
BstV1I GCAGC 1 cut(s) 86
BstX2I RGATCY 1 cut(s) 373
BstYI RGATCY 1 cut(s) 373
BsuRI GGCC 1 cut(s) 583
BtsI GCAGTG 1 cut(s) 369
BtsIMutI CAGTG 4 cut(s) 173, 217, 369, 474
BveI ACCTGC 1 cut(s) 691
Cac8I GCNNGC 1 cut(s) 644
Cfr13I GGNCC 1 cut(s) 519
CseI GACGC 1 cut(s) 13
CviAII CATG 3 cut(s) 321, 354, 643
CviJI RGCY 9 cut(s) 36, 77, 83, 168, 209, 249, 578, 583, 737
CviKI_1 RGCY 9 cut(s) 36, 77, 83, 168, 209, 249, 578, 583, 737
DdeI CTNAG 2 cut(s) 332, 440
DpnI GATC 2 cut(s) 375, 466
DpnII GATC 2 cut(s) 373, 464
DriI GACNNNNNGTC 1 cut(s) 282
Eam1104I CTCTTC 1 cut(s) 690
Eam1105I GACNNNNNGTC 1 cut(s) 282
EarI CTCTTC 1 cut(s) 690
Eco130I CCWWGG 1 cut(s) 647
Eco24I GRGCYC 1 cut(s) 739
Eco47I GGWCC 1 cut(s) 519
Eco57I CTGAAG 1 cut(s) 594
EcoRII CCWGG 1 cut(s) 578
EcoT14I CCWWGG 1 cut(s) 647
EcoT38I GRGCYC 1 cut(s) 739
ErhI CCWWGG 1 cut(s) 647
FaeI CATG 3 cut(s) 324, 357, 646
FaqI GGGAC 2 cut(s) 289, 303
FatI CATG 3 cut(s) 320, 353, 642
FblI GTMKAC 1 cut(s) 429
Fnu4HI GCNGC 1 cut(s) 75
FriOI GRGCYC 1 cut(s) 739
Fsp4HI GCNGC 1 cut(s) 75
FspBI CTAG 2 cut(s) 50, 483
GluI GCNGC 1 cut(s) 75
GsaI CCCAGC 1 cut(s) 172
HaeIII GGCC 1 cut(s) 583
HgaI GACGC 1 cut(s) 13
Hin1II CATG 3 cut(s) 324, 357, 646
HincII GTYRAC 3 cut(s) 105, 138, 430
HindII GTYRAC 3 cut(s) 105, 138, 430
HinfI GANTC 6 cut(s) 346, 426, 539, 557, 569, 762
HphI GGTGA 1 cut(s) 297
Hpy166II GTNNAC 3 cut(s) 105, 138, 430
Hpy188I TCNGA 3 cut(s) 64, 351, 574
Hpy188III TCNNGA 2 cut(s) 407, 667
Hpy8I GTNNAC 3 cut(s) 105, 138, 430
Hpy99I CGWCG 2 cut(s) 29, 32
HpyAV CCTTC 6 cut(s) 47, 209, 224, 330, 334, 760
HpyCH4III ACNGT 3 cut(s) 109, 142, 280
HpyCH4IV ACGT 1 cut(s) 292
HpyCH4V TGCA 3 cut(s) 362, 493, 601
HpyF10VI GCNNNNNNNGC 1 cut(s) 80
HpyF3I CTNAG 2 cut(s) 332, 440
HpySE526I ACGT 1 cut(s) 292
Hsp92II CATG 3 cut(s) 324, 357, 646
Kzo9I GATC 2 cut(s) 373, 464
LguI GCTCTTC 1 cut(s) 690
LmnI GCTCC 1 cut(s) 639
LpnPI CCDG 7 cut(s) 154, 223, 272, 392, 565, 592, 686
Lsp1109I GCAGC 1 cut(s) 86
MaeI CTAG 2 cut(s) 50, 483
MaeII ACGT 1 cut(s) 292
MaeIII GTNAC 3 cut(s) 45, 109, 469
MalI GATC 2 cut(s) 375, 466
MboI GATC 2 cut(s) 373, 464
MboII GAAGA 5 cut(s) 373, 677, 680, 712, 715
MfeI CAATTG 1 cut(s) 153
MflI RGATCY 1 cut(s) 373
MhlI GDGCHC 2 cut(s) 175, 739
MluCI AATT 6 cut(s) 95, 120, 153, 297, 693, 742
MlyI GAGTC 3 cut(s) 435, 533, 563
MmeI TCCRAC 2 cut(s) 351, 497
MnlI CCTC 3 cut(s) 60, 435, 619
MspR9I CCNGG 1 cut(s) 580
MunI CAATTG 1 cut(s) 153
MvaI CCWGG 1 cut(s) 580
MwoI GCNNNNNNNGC 1 cut(s) 80
NdeII GATC 2 cut(s) 373, 464
NlaIII CATG 3 cut(s) 324, 357, 646
NlaIV GGNNCC 1 cut(s) 375
NmuCI GTSAC 2 cut(s) 45, 469
NspI RCATGY 2 cut(s) 357, 646
PaeI GCATGC 1 cut(s) 646
PaqCI CACCTGC 1 cut(s) 691
PciI ACATGT 1 cut(s) 353
PciSI GCTCTTC 1 cut(s) 690
PfeI GAWTC 3 cut(s) 346, 557, 762
PkrI GCNGC 1 cut(s) 76
PleI GAGTC 3 cut(s) 434, 533, 563
PpsI GAGTC 3 cut(s) 434, 533, 563
PscI ACATGT 1 cut(s) 353
Psp6I CCWGG 1 cut(s) 578
PspFI CCCAGC 1 cut(s) 168
PspGI CCWGG 1 cut(s) 578
PspN4I GGNNCC 1 cut(s) 375
PspPI GGNCC 1 cut(s) 519
PsrI GAACNNNNNNTAC 2 cut(s) 492, 524
PsuI RGATCY 1 cut(s) 373
SalI GTCGAC 1 cut(s) 428
SapI GCTCTTC 1 cut(s) 690
SatI GCNGC 1 cut(s) 75
Sau3AI GATC 2 cut(s) 373, 464
Sau96I GGNCC 1 cut(s) 519
SchI GAGTC 3 cut(s) 435, 533, 563
ScrFI CCNGG 1 cut(s) 580
SduI GDGCHC 2 cut(s) 175, 739
SetI ASST 7 cut(s) 55, 71, 79, 85, 220, 295, 705
SfcI CTRYAG 1 cut(s) 78
SinI GGWCC 1 cut(s) 519
SmlI CTYRAG 1 cut(s) 504
SmoI CTYRAG 1 cut(s) 504
SphI GCATGC 1 cut(s) 646
Sse9I AATT 6 cut(s) 95, 120, 153, 297, 693, 742
SsiI CCGC 1 cut(s) 698
SspMI CTAG 2 cut(s) 50, 483
StyD4I CCNGG 1 cut(s) 578
StyI CCWWGG 1 cut(s) 647
TaaI ACNGT 3 cut(s) 109, 142, 280
TaiI ACGT 1 cut(s) 295
TaqI TCGA 3 cut(s) 86, 429, 525
TasI AATT 6 cut(s) 95, 120, 153, 297, 693, 742
TfiI GAWTC 3 cut(s) 346, 557, 762
TscAI CASTG 4 cut(s) 180, 217, 369, 474
TseFI GTSAC 2 cut(s) 45, 469
TseI GCWGC 1 cut(s) 74
Tsp45I GTSAC 2 cut(s) 45, 469
TspDTI ATGAA 1 cut(s) 626
TspGWI ACGGA 2 cut(s) 488, 563
TspRI CASTG 4 cut(s) 180, 217, 369, 474
VpaK11BI GGWCC 1 cut(s) 519
XapI RAATTY 1 cut(s) 742
XceI RCATGY 2 cut(s) 357, 646
XmiI GTMKAC 1 cut(s) 429
XspI CTAG 2 cut(s) 50, 483
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.