Cyclic nucleotide-gated ion channel 1-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 500 - 619 | 4.8e-07 | Reverse transcriptase-like |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1575 |
| Acc36I | ACCTGC | 2 cut(s) | 618, 1126 |
| Acc65I | GGTACC | 1 cut(s) | 964 |
| AccB1I | GGYRCC | 2 cut(s) | 227, 964 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 883, 1457 |
| AccI | GTMKAC | 3 cut(s) | 488, 1612, 1991 |
| AccII | CGCG | 5 cut(s) | 558, 1142, 1845, 1939, 1988 |
| AccIII | TCCGGA | 2 cut(s) | 1330, 1942 |
| AciI | CCGC | 4 cut(s) | 1079, 1556, 1835, 1937 |
| AclWI | GGATC | 3 cut(s) | 139, 284, 297 |
| AcoI | YGGCCR | 1 cut(s) | 1047 |
| AcsI | RAATTY | 6 cut(s) | 81, 423, 1164, 1369, 1793, 1802 |
| AcuI | CTGAAG | 2 cut(s) | 1914, 1980 |
| AfaI | GTAC | 4 cut(s) | 382, 482, 793, 966 |
| AfeI | AGCGCT | 2 cut(s) | 1263, 1619 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 343, 883, 1247, 1457, 1868 |
| AhlI | ACTAGT | 2 cut(s) | 1052, 1909 |
| AjnI | CCWGG | 3 cut(s) | 438, 1821, 1903 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 67, 99 |
| Alw21I | GWGCWC | 1 cut(s) | 1606 |
| Alw26I | GTCTC | 3 cut(s) | 286, 317, 831 |
| AlwI | GGATC | 3 cut(s) | 139, 284, 297 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 143 |
| Aor13HI | TCCGGA | 2 cut(s) | 1330, 1942 |
| Aor51HI | AGCGCT | 2 cut(s) | 1263, 1619 |
| AoxI | GGCC | 3 cut(s) | 1047, 1108, 1709 |
| ApeKI | GCWGC | 2 cut(s) | 137, 2006 |
| ApoI | RAATTY | 6 cut(s) | 81, 423, 1164, 1369, 1793, 1802 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 533, 565, 1295, 1327 |
| AseI | ATTAAT | 2 cut(s) | 732, 1320 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 593, 774, 2028 |
| Asp718I | GGTACC | 1 cut(s) | 964 |
| AspLEI | GCGC | 5 cut(s) | 1264, 1620, 1821, 1840, 1988 |
| AspS9I | GGNCC | 2 cut(s) | 442, 1629 |
| AsuC2I | CCSGG | 1 cut(s) | 563 |
| AsuHPI | GGTGA | 2 cut(s) | 998, 1477 |
| AvaII | GGWCC | 2 cut(s) | 442, 1629 |
| BamHI | GGATCC | 1 cut(s) | 289 |
| BanI | GGYRCC | 2 cut(s) | 227, 964 |
| BanII | GRGCYC | 1 cut(s) | 1606 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 957, 989 |
| BbsI | GAAGAC | 2 cut(s) | 522, 855 |
| Bbv12I | GWGCWC | 1 cut(s) | 1606 |
| BbvI | GCAGC | 2 cut(s) | 149, 1993 |
| BccI | CCATC | 1 cut(s) | 782 |
| BceAI | ACGGC | 3 cut(s) | 598, 1062, 1440 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 217, 251 |
| BciT130I | CCWGG | 3 cut(s) | 440, 1823, 1905 |
| BciVI | GTATCC | 1 cut(s) | 446 |
| BcnI | CCSGG | 1 cut(s) | 563 |
| BcoDI | GTCTC | 3 cut(s) | 286, 317, 831 |
| BcuI | ACTAGT | 2 cut(s) | 1052, 1909 |
| BfaI | CTAG | 5 cut(s) | 51, 1053, 1082, 1169, 1910 |
| BfmI | CTRYAG | 1 cut(s) | 363 |
| BfoI | RGCGCY | 4 cut(s) | 1265, 1621, 1822, 1841 |
| BfuAI | ACCTGC | 2 cut(s) | 618, 1126 |
| BfuI | GTATCC | 1 cut(s) | 446 |
| BglII | AGATCT | 1 cut(s) | 1196 |
| BisI | GCNGC | 4 cut(s) | 138, 1557, 1836, 2007 |
| BlsI | GCNGC | 4 cut(s) | 139, 1558, 1837, 2008 |
| BmcAI | AGTACT | 1 cut(s) | 482 |
| Bme1390I | CCNGG | 4 cut(s) | 440, 563, 1823, 1905 |
| Bme18I | GGWCC | 2 cut(s) | 442, 1629 |
| BmgT120I | GGNCC | 2 cut(s) | 442, 1629 |
| BmiI | GGNNCC | 4 cut(s) | 229, 291, 966, 1428 |
| BmrFI | CCNGG | 4 cut(s) | 440, 563, 1823, 1905 |
| BmsI | GCATC | 6 cut(s) | 149, 940, 1044, 1080, 1369, 1906 |
| BpiI | GAAGAC | 2 cut(s) | 522, 855 |
| BpmI | CTGGAG | 3 cut(s) | 24, 1319, 1620 |
| BpuEI | CTTGAG | 2 cut(s) | 1027, 1950 |
| BpuMI | CCSGG | 1 cut(s) | 563 |
| Bsa29I | ATCGAT | 1 cut(s) | 1692 |
| BsaBI | GATNNNNATC | 3 cut(s) | 803, 827, 1356 |
| BsaJI | CCNNGG | 1 cut(s) | 614 |
| BsaWI | WCCGGW | 3 cut(s) | 1069, 1330, 1942 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 343, 883, 1247, 1457, 1868 |
| Bse1I | ACTGG | 2 cut(s) | 584, 1025 |
| Bse3DI | GCAATG | 1 cut(s) | 1551 |
| Bse8I | GATNNNNATC | 3 cut(s) | 803, 827, 1356 |
| BseAI | TCCGGA | 2 cut(s) | 1330, 1942 |
| BseBI | CCWGG | 3 cut(s) | 440, 1823, 1905 |
| BseCI | ATCGAT | 1 cut(s) | 1692 |
| BseDI | CCNNGG | 1 cut(s) | 614 |
| BseGI | GGATG | 4 cut(s) | 768, 787, 955, 1327 |
| BseJI | GATNNNNATC | 3 cut(s) | 803, 827, 1356 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 343, 883, 1247, 1457, 1868 |
| BseMI | GCAATG | 1 cut(s) | 1551 |
| BseMII | CTCAG | 1 cut(s) | 1734 |
| BseNI | ACTGG | 2 cut(s) | 584, 1025 |
| BseXI | GCAGC | 2 cut(s) | 149, 1993 |
| BseYI | CCCAGC | 1 cut(s) | 1461 |
| Bsh1236I | CGCG | 5 cut(s) | 558, 1142, 1845, 1939, 1988 |
| Bsh1285I | CGRYCG | 2 cut(s) | 492, 1227 |
| BshFI | GGCC | 3 cut(s) | 1049, 1110, 1711 |
| BshNI | GGYRCC | 2 cut(s) | 227, 964 |
| BshVI | ATCGAT | 1 cut(s) | 1692 |
| BsiEI | CGRYCG | 2 cut(s) | 492, 1227 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1606 |
| BsiSI | CCGG | 5 cut(s) | 563, 1070, 1331, 1430, 1943 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 343, 883, 1247, 1457, 1868 |
| BsmAI | GTCTC | 3 cut(s) | 286, 317, 831 |
| BsnI | GGCC | 3 cut(s) | 1049, 1110, 1711 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1606 |
| Bsp13I | TCCGGA | 2 cut(s) | 1330, 1942 |
| Bsp143I | GATC | 6 cut(s) | 131, 289, 553, 1084, 1196, 1306 |
| Bsp68I | TCGCGA | 2 cut(s) | 558, 1142 |
| BspACI | CCGC | 4 cut(s) | 1079, 1556, 1835, 1937 |
| BspANI | GGCC | 3 cut(s) | 1049, 1110, 1711 |
| BspCNI | CTCAG | 1 cut(s) | 1733 |
| BspDI | ATCGAT | 1 cut(s) | 1692 |
| BspEI | TCCGGA | 2 cut(s) | 1330, 1942 |
| BspFNI | CGCG | 5 cut(s) | 558, 1142, 1845, 1939, 1988 |
| BspHI | TCATGA | 1 cut(s) | 1402 |
| BspLI | GGNNCC | 4 cut(s) | 229, 291, 966, 1428 |
| BspMI | ACCTGC | 2 cut(s) | 618, 1126 |
| BspPI | GGATC | 3 cut(s) | 139, 284, 297 |
| BspQI | GCTCTTC | 1 cut(s) | 1100 |
| BspT107I | GGYRCC | 2 cut(s) | 227, 964 |
| BsrDI | GCAATG | 1 cut(s) | 1551 |
| BsrI | ACTGG | 2 cut(s) | 584, 1025 |
| BssECI | CCNNGG | 1 cut(s) | 614 |
| BssMI | GATC | 6 cut(s) | 131, 289, 553, 1084, 1196, 1306 |
| BssNAI | GTATAC | 1 cut(s) | 1613 |
| Bst1107I | GTATAC | 1 cut(s) | 1613 |
| Bst2UI | CCWGG | 3 cut(s) | 440, 1823, 1905 |
| Bst4CI | ACNGT | 6 cut(s) | 70, 169, 669, 1127, 1455, 1982 |
| Bst6I | CTCTTC | 3 cut(s) | 1100, 1218, 1401 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1856 |
| BstC8I | GCNNGC | 4 cut(s) | 175, 226, 1266, 1384 |
| BstDEI | CTNAG | 2 cut(s) | 1607, 1720 |
| BstDSI | CCRYGG | 1 cut(s) | 614 |
| BstF5I | GGATG | 4 cut(s) | 768, 787, 955, 1327 |
| BstFNI | CGCG | 5 cut(s) | 558, 1142, 1845, 1939, 1988 |
| BstH2I | RGCGCY | 4 cut(s) | 1265, 1621, 1822, 1841 |
| BstHHI | GCGC | 5 cut(s) | 1264, 1620, 1821, 1840, 1988 |
| BstKTI | GATC | 6 cut(s) | 134, 292, 556, 1087, 1199, 1309 |
| BstMAI | GTCTC | 3 cut(s) | 286, 317, 831 |
| BstMBI | GATC | 6 cut(s) | 131, 289, 553, 1084, 1196, 1306 |
| BstMCI | CGRYCG | 2 cut(s) | 492, 1227 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 197, 1274, 1816, 1832, 1856, 1945, 2006 |
| BstNI | CCWGG | 3 cut(s) | 440, 1823, 1905 |
| BstNSI | RCATGY | 4 cut(s) | 177, 195, 941, 1386 |
| BstSCI | CCNGG | 4 cut(s) | 438, 561, 1821, 1903 |
| BstSFI | CTRYAG | 1 cut(s) | 363 |
| BstUI | CGCG | 5 cut(s) | 558, 1142, 1845, 1939, 1988 |
| BstV1I | GCAGC | 2 cut(s) | 149, 1993 |
| BstV2I | GAAGAC | 2 cut(s) | 522, 855 |
| BstX2I | RGATCY | 2 cut(s) | 289, 1196 |
| BstYI | RGATCY | 2 cut(s) | 289, 1196 |
| BstZ17I | GTATAC | 1 cut(s) | 1613 |
| Bsu15I | ATCGAT | 1 cut(s) | 1692 |
| BsuI | GTATCC | 1 cut(s) | 446 |
| BsuRI | GGCC | 3 cut(s) | 1049, 1110, 1711 |
| BsuTUI | ATCGAT | 1 cut(s) | 1692 |
| BtgI | CCRYGG | 1 cut(s) | 614 |
| BtgZI | GCGATG | 1 cut(s) | 1157 |
| BtsCI | GGATG | 4 cut(s) | 768, 787, 955, 1327 |
| BtsIMutI | CAGTG | 4 cut(s) | 591, 744, 1032, 1987 |
| BtuMI | TCGCGA | 2 cut(s) | 558, 1142 |
| BveI | ACCTGC | 2 cut(s) | 618, 1126 |
| Cac8I | GCNNGC | 4 cut(s) | 175, 226, 1266, 1384 |
| CaiI | CAGNNNCTG | 1 cut(s) | 143 |
| CciI | TCATGA | 1 cut(s) | 1402 |
| CfoI | GCGC | 5 cut(s) | 1264, 1620, 1821, 1840, 1988 |
| Cfr13I | GGNCC | 2 cut(s) | 442, 1629 |
| ClaI | ATCGAT | 1 cut(s) | 1692 |
| CseI | GACGC | 2 cut(s) | 1928, 1977 |
| Csp6I | GTAC | 4 cut(s) | 381, 481, 792, 965 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1963, 1998 |
| CviQI | GTAC | 4 cut(s) | 381, 481, 792, 965 |
| DdeI | CTNAG | 2 cut(s) | 1607, 1720 |
| DpnI | GATC | 6 cut(s) | 133, 291, 555, 1086, 1198, 1308 |
| DpnII | GATC | 6 cut(s) | 131, 289, 553, 1084, 1196, 1306 |
| EaeI | YGGCCR | 1 cut(s) | 1047 |
| Eam1104I | CTCTTC | 3 cut(s) | 1100, 1218, 1401 |
| EarI | CTCTTC | 3 cut(s) | 1100, 1218, 1401 |
| Ecl136II | GAGCTC | 1 cut(s) | 1604 |
| Eco24I | GRGCYC | 1 cut(s) | 1606 |
| Eco32I | GATATC | 1 cut(s) | 1744 |
| Eco47I | GGWCC | 2 cut(s) | 442, 1629 |
| Eco47III | AGCGCT | 2 cut(s) | 1263, 1619 |
| Eco53kI | GAGCTC | 1 cut(s) | 1604 |
| Eco57I | CTGAAG | 2 cut(s) | 1914, 1980 |
| EcoICRI | GAGCTC | 1 cut(s) | 1604 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1629 |
| EcoRII | CCWGG | 3 cut(s) | 438, 1821, 1903 |
| EcoRV | GATATC | 1 cut(s) | 1744 |
| EcoT22I | ATGCAT | 3 cut(s) | 179, 578, 1384 |
| EcoT38I | GRGCYC | 1 cut(s) | 1606 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1824, 1856 |
| FauI | CCCGC | 1 cut(s) | 1086 |
| FblI | GTMKAC | 3 cut(s) | 488, 1612, 1991 |
| Fnu4HI | GCNGC | 4 cut(s) | 138, 1557, 1836, 2007 |
| FokI | GGATG | 4 cut(s) | 775, 794, 962, 1314 |
| FriOI | GRGCYC | 1 cut(s) | 1606 |
| Fsp4HI | GCNGC | 4 cut(s) | 138, 1557, 1836, 2007 |
| FspBI | CTAG | 5 cut(s) | 51, 1053, 1082, 1169, 1910 |
| GlaI | GCGC | 5 cut(s) | 1263, 1619, 1820, 1839, 1987 |
| GluI | GCNGC | 4 cut(s) | 138, 1557, 1836, 2007 |
| GsaI | CCCAGC | 1 cut(s) | 1465 |
| GsuI | CTGGAG | 3 cut(s) | 24, 1319, 1620 |
| HaeII | RGCGCY | 4 cut(s) | 1265, 1621, 1822, 1841 |
| HaeIII | GGCC | 3 cut(s) | 1049, 1110, 1711 |
| HapII | CCGG | 5 cut(s) | 563, 1070, 1331, 1430, 1943 |
| HgaI | GACGC | 2 cut(s) | 1928, 1977 |
| HhaI | GCGC | 5 cut(s) | 1264, 1620, 1821, 1840, 1988 |
| Hin6I | GCGC | 5 cut(s) | 1262, 1618, 1819, 1838, 1986 |
| HinP1I | GCGC | 5 cut(s) | 1262, 1618, 1819, 1838, 1986 |
| HincII | GTYRAC | 6 cut(s) | 66, 471, 489, 621, 1123, 1975 |
| HindII | GTYRAC | 6 cut(s) | 66, 471, 489, 621, 1123, 1975 |
| HindIII | AAGCTT | 3 cut(s) | 91, 1003, 1682 |
| HinfI | GANTC | 6 cut(s) | 7, 518, 523, 1352, 1412, 1670 |
| HpaI | GTTAAC | 1 cut(s) | 621 |
| HpaII | CCGG | 5 cut(s) | 563, 1070, 1331, 1430, 1943 |
| HphI | GGTGA | 2 cut(s) | 998, 1477 |
| Hpy188I | TCNGA | 9 cut(s) | 22, 114, 514, 535, 920, 1089, 1659, 1675, 1723 |
| Hpy99I | CGWCG | 2 cut(s) | 239, 320 |
| HpyAV | CCTTC | 8 cut(s) | 20, 241, 386, 442, 918, 1722, 1757, 1769 |
| HpyCH4III | ACNGT | 6 cut(s) | 70, 169, 669, 1127, 1455, 1982 |
| HpyCH4IV | ACGT | 2 cut(s) | 353, 888 |
| HpyCH4V | TGCA | 6 cut(s) | 126, 177, 206, 278, 576, 1382 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 197, 1274, 1816, 1832, 1856, 1945, 2006 |
| HpyF3I | CTNAG | 2 cut(s) | 1607, 1720 |
| HpySE526I | ACGT | 2 cut(s) | 353, 888 |
| HspAI | GCGC | 5 cut(s) | 1262, 1618, 1819, 1838, 1986 |
| Kpn2I | TCCGGA | 2 cut(s) | 1330, 1942 |
| KpnI | GGTACC | 1 cut(s) | 968 |
| KspAI | GTTAAC | 1 cut(s) | 621 |
| Kzo9I | GATC | 6 cut(s) | 131, 289, 553, 1084, 1196, 1306 |
| LguI | GCTCTTC | 1 cut(s) | 1100 |
| LmnI | GCTCC | 5 cut(s) | 934, 1432, 1601, 1864, 1945 |
| Lsp1109I | GCAGC | 2 cut(s) | 149, 1993 |
| LweI | GCATC | 6 cut(s) | 149, 940, 1044, 1080, 1369, 1906 |
| MaeI | CTAG | 5 cut(s) | 51, 1053, 1082, 1169, 1910 |
| MaeII | ACGT | 2 cut(s) | 353, 888 |
| MaeIII | GTNAC | 6 cut(s) | 194, 986, 1055, 1205, 1287, 2040 |
| MalI | GATC | 6 cut(s) | 133, 291, 555, 1086, 1198, 1308 |
| MboI | GATC | 6 cut(s) | 131, 289, 553, 1084, 1196, 1306 |
| MboII | GAAGA | 8 cut(s) | 527, 860, 1087, 1205, 1351, 1418, 1907, 1936 |
| MfeI | CAATTG | 1 cut(s) | 1474 |
| MflI | RGATCY | 2 cut(s) | 289, 1196 |
| MhlI | GDGCHC | 1 cut(s) | 1606 |
| MlyI | GAGTC | 3 cut(s) | 16, 512, 1679 |
| MmeI | TCCRAC | 1 cut(s) | 1998 |
| Mph1103I | ATGCAT | 3 cut(s) | 179, 578, 1384 |
| MroI | TCCGGA | 2 cut(s) | 1330, 1942 |
| MroXI | GAANNNNTTC | 3 cut(s) | 593, 774, 2028 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1722 |
| MspA1I | CMGCKG | 1 cut(s) | 2000 |
| MspI | CCGG | 5 cut(s) | 563, 1070, 1331, 1430, 1943 |
| MspR9I | CCNGG | 4 cut(s) | 440, 563, 1823, 1905 |
| MunI | CAATTG | 1 cut(s) | 1474 |
| MvaI | CCWGG | 3 cut(s) | 440, 1823, 1905 |
| MvnI | CGCG | 5 cut(s) | 558, 1142, 1845, 1939, 1988 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 197, 1274, 1816, 1832, 1856, 1945, 2006 |
| NciI | CCSGG | 1 cut(s) | 563 |
| NdeII | GATC | 6 cut(s) | 131, 289, 553, 1084, 1196, 1306 |
| NlaIV | GGNNCC | 4 cut(s) | 229, 291, 966, 1428 |
| NmuCI | GTSAC | 4 cut(s) | 986, 1055, 1205, 2040 |
| NruI | TCGCGA | 2 cut(s) | 558, 1142 |
| NsiI | ATGCAT | 3 cut(s) | 179, 578, 1384 |
| NspI | RCATGY | 4 cut(s) | 177, 195, 941, 1386 |
| PaeI | GCATGC | 2 cut(s) | 177, 1386 |
| PagI | TCATGA | 1 cut(s) | 1402 |
| PciSI | GCTCTTC | 1 cut(s) | 1100 |
| PdmI | GAANNNNTTC | 3 cut(s) | 593, 774, 2028 |
| PfeI | GAWTC | 3 cut(s) | 523, 1352, 1412 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 883, 1457 |
| PfoI | TCCNGGA | 1 cut(s) | 438 |
| PkrI | GCNGC | 4 cut(s) | 139, 1558, 1837, 2008 |
| PleI | GAGTC | 3 cut(s) | 15, 512, 1678 |
| PpsI | GAGTC | 3 cut(s) | 15, 512, 1678 |
| PpuMI | RGGWCCY | 1 cut(s) | 1629 |
| PshBI | ATTAAT | 2 cut(s) | 732, 1320 |
| PsiI | TTATAA | 1 cut(s) | 1575 |
| Psp124BI | GAGCTC | 1 cut(s) | 1606 |
| Psp5II | RGGWCCY | 1 cut(s) | 1629 |
| Psp6I | CCWGG | 3 cut(s) | 438, 1821, 1903 |
| PspFI | CCCAGC | 1 cut(s) | 1461 |
| PspGI | CCWGG | 3 cut(s) | 438, 1821, 1903 |
| PspN4I | GGNNCC | 4 cut(s) | 229, 291, 966, 1428 |
| PspPI | GGNCC | 2 cut(s) | 442, 1629 |
| PspPPI | RGGWCCY | 1 cut(s) | 1629 |
| PstNI | CAGNNNCTG | 1 cut(s) | 143 |
| PsuI | RGATCY | 2 cut(s) | 289, 1196 |
| PvuII | CAGCTG | 1 cut(s) | 2000 |
| RruI | TCGCGA | 2 cut(s) | 558, 1142 |
| RsaI | GTAC | 4 cut(s) | 382, 482, 793, 966 |
| RsaNI | GTAC | 4 cut(s) | 381, 481, 792, 965 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1722 |
| SacI | GAGCTC | 1 cut(s) | 1606 |
| SalI | GTCGAC | 1 cut(s) | 487 |
| SapI | GCTCTTC | 1 cut(s) | 1100 |
| SatI | GCNGC | 4 cut(s) | 138, 1557, 1836, 2007 |
| Sau3AI | GATC | 6 cut(s) | 131, 289, 553, 1084, 1196, 1306 |
| Sau96I | GGNCC | 2 cut(s) | 442, 1629 |
| ScaI | AGTACT | 1 cut(s) | 482 |
| SchI | GAGTC | 3 cut(s) | 16, 512, 1679 |
| ScrFI | CCNGG | 4 cut(s) | 440, 563, 1823, 1905 |
| SduI | GDGCHC | 1 cut(s) | 1606 |
| SfaNI | GCATC | 6 cut(s) | 149, 940, 1044, 1080, 1369, 1906 |
| SfcI | CTRYAG | 1 cut(s) | 363 |
| SinI | GGWCC | 2 cut(s) | 442, 1629 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1722 |
| SmlI | CTYRAG | 2 cut(s) | 1006, 1965 |
| SmoI | CTYRAG | 2 cut(s) | 1006, 1965 |
| SpeI | ACTAGT | 2 cut(s) | 1052, 1909 |
| SphI | GCATGC | 2 cut(s) | 177, 1386 |
| SsiI | CCGC | 4 cut(s) | 1079, 1556, 1835, 1937 |
| SspI | AATATT | 3 cut(s) | 461, 896, 1768 |
| SspMI | CTAG | 5 cut(s) | 51, 1053, 1082, 1169, 1910 |
| SstI | GAGCTC | 1 cut(s) | 1606 |
| StyD4I | CCNGG | 4 cut(s) | 438, 561, 1821, 1903 |
| TaaI | ACNGT | 6 cut(s) | 70, 169, 669, 1127, 1455, 1982 |
| TaiI | ACGT | 2 cut(s) | 356, 891 |
| TaqI | TCGA | 9 cut(s) | 79, 318, 488, 521, 1223, 1236, 1692, 1738, 1750 |
| TaqII | GACCGA | 2 cut(s) | 506, 1241 |
| TatI | WGTACW | 1 cut(s) | 480 |
| TauI | GCSGC | 2 cut(s) | 1559, 1838 |
| TfiI | GAWTC | 3 cut(s) | 523, 1352, 1412 |
| TscAI | CASTG | 4 cut(s) | 591, 751, 1032, 1987 |
| TseFI | GTSAC | 4 cut(s) | 986, 1055, 1205, 2040 |
| TseI | GCWGC | 2 cut(s) | 137, 2006 |
| Tsp45I | GTSAC | 4 cut(s) | 986, 1055, 1205, 2040 |
| TspDTI | ATGAA | 9 cut(s) | 21, 39, 779, 1034, 1087, 1419, 1540, 1652, 1845 |
| TspGWI | ACGGA | 1 cut(s) | 404 |
| TspRI | CASTG | 4 cut(s) | 591, 751, 1032, 1987 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 883, 1457 |
| VpaK11BI | GGWCC | 2 cut(s) | 442, 1629 |
| VspI | ATTAAT | 2 cut(s) | 732, 1320 |
| XapI | RAATTY | 6 cut(s) | 81, 423, 1164, 1369, 1793, 1802 |
| XbaI | TCTAGA | 1 cut(s) | 1168 |
| XceI | RCATGY | 4 cut(s) | 177, 195, 941, 1386 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1458 |
| XmiI | GTMKAC | 3 cut(s) | 488, 1612, 1991 |
| XmnI | GAANNNNTTC | 3 cut(s) | 593, 774, 2028 |
| XspI | CTAG | 5 cut(s) | 51, 1053, 1082, 1169, 1910 |
| ZrmI | AGTACT | 1 cut(s) | 482 |
| Zsp2I | ATGCAT | 3 cut(s) | 179, 578, 1384 |