Rroxscaffold_2G00093240

N-acetylglucosaminyltransferase II (MGAT2)

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
14653759 .. 14654598
840 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00093240.1

Sequence Viewer

Length: 552 bp
ATGATTATGACCAAGCGTCTTCAGAAAGGTGAGTACTATGGAGAGGAAGTGTTAAATTGGGCATCAATGAACTATGAGCTCCAGTATCGCAAATGTCGGCAAACACTTCCTATTTCGACCCGAGATGTCAAATGTCTTACCAAAGTCGAAGCCGTTTCTATCAATGCCCAGTTCTCATTATCGTTACTAAAACGTATCAGCCGCTGGAGGCAGAAGTTGGCGAAGCCGACACTTACCCATGACAACACTGATGAGACATTTAACAAGTCGGCAACTATAGAATTGGAGGAGATTGAGGAGTCAAAACAGATGAAAATGAAGAACATGGAATTAGATAAAGGCAGAGGAGAATCAAGAGAAGACGTTGCGGTTACAGGTGCATCTACATCCAGTACTGTTGAACGGAGACTTGAACAGATGCTTTGCGAGCAGCTGGTTCTAGTCCGACAGATTCGTGATGATATGGCTACACAGGGACGAAGATTAGATGGCATGGCTGCATTCTTAGCCACGTTGGGATATCCAGGCATACCGGCTCCTCCTGCACCTTGA

Protein Analysis

183

Amino Acids

20.89

Weight (kDa)

8.74

Isoelectric Point (pI)

51.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000491)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g12100 FvH4_3g12110 FvH4_3g12111 FvH4_3g12120 FvH4_3g12120 FvH4_3g28952 FvH4_6g40660 FvH4_6g40661 FvH4_6g40960
rosa_chinensis RchiOBHm_Chr1g0340941 RchiOBHm_Chr2g0156041 RchiOBHm_Chr2g0156591 RchiOBHm_Chr5g0019791 RchiOBHm_Chr5g0019821
rosa_laevigata RLG00000007998 RLG00000020883 RLG00000020887 RLG00000020922 RLG00000029052 RLG00000032473 RLG00000032474 RLG00000032477 RLG00000032478
rosa_multiflora Rmu_co8231441.1_g000001 Rmu_co8352639.1_g000001 Rmu_co8510723.1_g000001 Rmu_sc0000344.1_g000022 Rmu_sc0000344.1_g000023 Rmu_sc0001145.1_g000015 Rmu_sc0001145.1_g000016 Rmu_sc0001211.1_g000087 Rmu_sc0001319.1_g000003 Rmu_sc0008321.1_g000001 Rmu_sc0011512.1_g000007 Rmu_sc0011922.1_g000003 Rmu_sc0011922.1_g000007 Rmu_ssc0000155.1_g000002 Rmu_ssc0000155.1_g000004
rosa_roxburghii Rroxscaffold_1G00058320 Rroxscaffold_1G00058340 Rroxscaffold_2G00092930 Rroxscaffold_2G00093240 Rroxscaffold_2G00093270 Rroxscaffold_4G00311560 Rroxscaffold_4G00311590 Rroxscaffold_5G00360130
rosa_rugosa Rorug01G0160700.1 Rorug02G0451400 Rorug02G0454400 Rorug02G0454400 Rorug02G0454500 Rorug02G0454600 Rorug05G0054100 Rorug05G0054200 Rorug05G0054300
rosa_samantha Rh1AG175400 Rh1BG143700 Rh1BG143800 Rh1CG163400 Rh1DG175300 Rh1DG175400 Rh1DG175500 Rh2AG518200 Rh2AG518300 Rh2BG529400 Rh2BG532700 Rh2BG533200 Rh2CG502900 Rh2CG503000 Rh2DG538500 Rh2DG538600 Rh2DG541600 Rh2DG542000 Rh4BG200000 Rh4BG200100 Rh5AG144500 Rh5AG144600 Rh5AG366400 Rh5BG143500 Rh5BG143700 Rh5CG155000 Rh5CG155300 Rh5DG143500 Rh7BG257300 Rh7BG257400 Rh7BG257500
rosa_wichuraiana Rw1G014680 Rw2G042670 Rw2G042900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 202, 368
AcuI CTGAAG 1 cut(s) 5
AfaI GTAC 2 cut(s) 35, 394
AgsI TTSAA 2 cut(s) 401, 413
AhdI GACNNNNNGTC 1 cut(s) 15
AjnI CCWGG 1 cut(s) 523
AluBI AGCT 2 cut(s) 79, 433
AluI AGCT 2 cut(s) 79, 433
Alw21I GWGCWC 1 cut(s) 81
Alw26I GTCTC 2 cut(s) 248, 400
AlwNI CAGNNNCTG 1 cut(s) 204
Ama87I CYCGRG 1 cut(s) 120
ApeKI GCWGC 2 cut(s) 430, 497
AsuHPI GGTGA 1 cut(s) 41
AvaI CYCGRG 1 cut(s) 120
BanII GRGCYC 1 cut(s) 81
BbsI GAAGAC 2 cut(s) 11, 366
Bbv12I GWGCWC 1 cut(s) 81
BbvI GCAGC 2 cut(s) 442, 484
BccI CCATC 1 cut(s) 482
BceAI ACGGC 1 cut(s) 137
BciT130I CCWGG 1 cut(s) 525
BcoDI GTCTC 2 cut(s) 248, 400
BfaI CTAG 1 cut(s) 440
BfmI CTRYAG 1 cut(s) 276
BisI GCNGC 3 cut(s) 202, 431, 498
BlsI GCNGC 3 cut(s) 203, 432, 499
BmcAI AGTACT 2 cut(s) 35, 394
Bme1390I CCNGG 1 cut(s) 525
BmeRI GACNNNNNGTC 1 cut(s) 15
BmeT110I CYCGRG 1 cut(s) 120
BmiI GGNNCC 1 cut(s) 537
BmrFI CCNGG 1 cut(s) 525
BmrI ACTGGG 1 cut(s) 163
BmsI GCATC 3 cut(s) 71, 389, 408
BmuI ACTGGG 1 cut(s) 163
BpiI GAAGAC 2 cut(s) 11, 366
BpmI CTGGAG 2 cut(s) 65, 226
BsaXI ACNNNNNCTCC 2 cut(s) 33, 63
Bse118I RCCGGY 1 cut(s) 532
Bse1I ACTGG 3 cut(s) 82, 169, 390
BseBI CCWGG 1 cut(s) 525
BseGI GGATG 1 cut(s) 386
BseNI ACTGG 3 cut(s) 82, 169, 390
BseRI GAGGAG 4 cut(s) 302, 311, 360, 528
BseXI GCAGC 2 cut(s) 442, 484
BsgI GTGCAG 1 cut(s) 528
BsiHKAI GWGCWC 1 cut(s) 81
BsiHKCI CYCGRG 1 cut(s) 120
BsiSI CCGG 1 cut(s) 533
BslFI GGGAC 1 cut(s) 489
BsmAI GTCTC 2 cut(s) 248, 400
BsmFI GGGAC 1 cut(s) 489
BsmI GAATGC 1 cut(s) 500
BsoBI CYCGRG 1 cut(s) 120
Bsp1286I GDGCHC 1 cut(s) 81
BspACI CCGC 2 cut(s) 202, 368
BspLI GGNNCC 1 cut(s) 537
BsrFI RCCGGY 1 cut(s) 532
BsrI ACTGG 3 cut(s) 82, 169, 390
BssAI RCCGGY 1 cut(s) 532
Bst2UI CCWGG 1 cut(s) 525
Bst4CI ACNGT 1 cut(s) 397
BstC8I GCNNGC 1 cut(s) 428
BstDEI CTNAG 1 cut(s) 505
BstF5I GGATG 1 cut(s) 386
BstMAI GTCTC 2 cut(s) 248, 400
BstMWI GCNNNNNNNGC 3 cut(s) 427, 506, 542
BstNI CCWGG 1 cut(s) 525
BstSCI CCNGG 1 cut(s) 523
BstSFI CTRYAG 1 cut(s) 276
BstV1I GCAGC 2 cut(s) 442, 484
BstV2I GAAGAC 2 cut(s) 11, 366
BtsCI GGATG 1 cut(s) 386
BtsIMutI CAGTG 1 cut(s) 246
Cac8I GCNNGC 1 cut(s) 428
CaiI CAGNNNCTG 1 cut(s) 204
Cfr10I RCCGGY 1 cut(s) 532
CseI GACGC 1 cut(s) 5
Csp6I GTAC 2 cut(s) 34, 393
CviAII CATG 3 cut(s) 239, 325, 493
CviJI RGCY 9 cut(s) 79, 152, 201, 226, 433, 467, 497, 509, 536
CviKI_1 RGCY 9 cut(s) 79, 152, 201, 226, 433, 467, 497, 509, 536
CviQI GTAC 2 cut(s) 34, 393
DdeI CTNAG 1 cut(s) 505
DriI GACNNNNNGTC 1 cut(s) 15
Eam1105I GACNNNNNGTC 1 cut(s) 15
Ecl136II GAGCTC 1 cut(s) 79
Eco24I GRGCYC 1 cut(s) 81
Eco32I GATATC 1 cut(s) 521
Eco53kI GAGCTC 1 cut(s) 79
Eco57I CTGAAG 1 cut(s) 5
Eco88I CYCGRG 1 cut(s) 120
EcoICRI GAGCTC 1 cut(s) 79
EcoRII CCWGG 1 cut(s) 523
EcoRV GATATC 1 cut(s) 521
EcoT38I GRGCYC 1 cut(s) 81
FaeI CATG 3 cut(s) 242, 328, 496
FaiI YATR 9 cut(s) 8, 39, 75, 240, 278, 326, 464, 494, 530
FaqI GGGAC 1 cut(s) 489
FatI CATG 3 cut(s) 238, 324, 492
Fnu4HI GCNGC 3 cut(s) 202, 431, 498
FokI GGATG 1 cut(s) 373
FriOI GRGCYC 1 cut(s) 81
Fsp4HI GCNGC 3 cut(s) 202, 431, 498
FspBI CTAG 1 cut(s) 440
GluI GCNGC 3 cut(s) 202, 431, 498
GsuI CTGGAG 2 cut(s) 65, 226
HapII CCGG 1 cut(s) 533
HgaI GACGC 1 cut(s) 5
Hin1II CATG 3 cut(s) 242, 328, 496
HinfI GANTC 3 cut(s) 299, 350, 451
HpaII CCGG 1 cut(s) 533
HphI GGTGA 1 cut(s) 41
Hpy188I TCNGA 2 cut(s) 24, 446
Hpy188III TCNNGA 2 cut(s) 354, 455
HpyCH4III ACNGT 1 cut(s) 397
HpyCH4IV ACGT 3 cut(s) 193, 363, 512
HpyCH4V TGCA 3 cut(s) 380, 500, 545
HpyF10VI GCNNNNNNNGC 3 cut(s) 427, 506, 542
HpyF3I CTNAG 1 cut(s) 505
HpySE526I ACGT 3 cut(s) 193, 363, 512
Hsp92II CATG 3 cut(s) 242, 328, 496
LmnI GCTCC 2 cut(s) 84, 541
Lsp1109I GCAGC 2 cut(s) 442, 484
LweI GCATC 3 cut(s) 71, 389, 408
MaeI CTAG 1 cut(s) 440
MaeII ACGT 3 cut(s) 193, 363, 512
MaeIII GTNAC 2 cut(s) 183, 370
MboII GAAGA 4 cut(s) 11, 331, 371, 492
MhlI GDGCHC 1 cut(s) 81
MluCI AATT 3 cut(s) 55, 281, 329
MlyI GAGTC 1 cut(s) 308
MmeI TCCRAC 1 cut(s) 469
MnlI CCTC 6 cut(s) 37, 201, 280, 289, 338, 549
MseI TTAA 2 cut(s) 53, 261
MspA1I CMGCKG 2 cut(s) 204, 433
MspI CCGG 1 cut(s) 533
MspR9I CCNGG 1 cut(s) 525
Mva1269I GAATGC 1 cut(s) 500
MvaI CCWGG 1 cut(s) 525
MwoI GCNNNNNNNGC 3 cut(s) 427, 506, 542
NlaIII CATG 3 cut(s) 242, 328, 496
NlaIV GGNNCC 1 cut(s) 537
PctI GAATGC 1 cut(s) 500
PfeI GAWTC 2 cut(s) 350, 451
PkrI GCNGC 3 cut(s) 203, 432, 499
PleI GAGTC 1 cut(s) 307
PpsI GAGTC 1 cut(s) 307
Psp124BI GAGCTC 1 cut(s) 81
Psp6I CCWGG 1 cut(s) 523
PspGI CCWGG 1 cut(s) 523
PspN4I GGNNCC 1 cut(s) 537
PstNI CAGNNNCTG 1 cut(s) 204
PvuII CAGCTG 1 cut(s) 433
RsaI GTAC 2 cut(s) 35, 394
RsaNI GTAC 2 cut(s) 34, 393
SacI GAGCTC 1 cut(s) 81
SaqAI TTAA 2 cut(s) 53, 261
SatI GCNGC 3 cut(s) 202, 431, 498
ScaI AGTACT 2 cut(s) 35, 394
SchI GAGTC 1 cut(s) 308
ScrFI CCNGG 1 cut(s) 525
SduI GDGCHC 1 cut(s) 81
SetI ASST 8 cut(s) 31, 81, 196, 366, 379, 435, 515, 550
SfaNI GCATC 3 cut(s) 71, 389, 408
SfcI CTRYAG 1 cut(s) 276
Sse9I AATT 3 cut(s) 55, 281, 329
SsiI CCGC 2 cut(s) 202, 368
SspMI CTAG 1 cut(s) 440
SstI GAGCTC 1 cut(s) 81
StyD4I CCNGG 1 cut(s) 523
TaaI ACNGT 1 cut(s) 397
TaiI ACGT 3 cut(s) 196, 366, 515
TaqI TCGA 2 cut(s) 116, 147
TasI AATT 3 cut(s) 55, 281, 329
TatI WGTACW 2 cut(s) 33, 392
TauI GCSGC 1 cut(s) 204
TfiI GAWTC 2 cut(s) 350, 451
Tru1I TTAA 2 cut(s) 53, 261
Tru9I TTAA 2 cut(s) 53, 261
TscAI CASTG 1 cut(s) 253
TseI GCWGC 2 cut(s) 430, 497
TspDTI ATGAA 3 cut(s) 83, 326, 332
TspGWI ACGGA 1 cut(s) 418
TspRI CASTG 1 cut(s) 253
XspI CTAG 1 cut(s) 440
ZrmI AGTACT 2 cut(s) 35, 394
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.