RLG00000020887

N-acetylglucosaminyltransferase II (MGAT2)

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
69829942 .. 69833907
3966 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020887

Sequence Viewer

Length: 567 bp
ATGATCATGACCAAGCGTCTTCAGAAAGGTGAGTATTATGGAGAGGAAGTGTTAAATTGGGCATCAATGAACTATGAGCTCATCCAGTATCACAAATGTTGGCAAACACTTCCTATTTCGACCCGAGATGTCAAATGTCTTACCAAAGTCGAAGCCGTTTCTATCAATGGCAAGTTCTCATTATCGTTACTAAAACGTACCAGCCGCTGGAGGCAGAAGTTGGCAAAGCCGACACTTACCCATGACAACACTAATGAGACATTTAACAAGACAAACATGCAGTCGGCAACTATAGAATTGGAGGAGATTGAGGAGTCAAAACAGATGAAGATGAAGAACATGGAATTAGATAAAGGCAGAGGAGAATCAAGAGAAGACGTTGCGGTTACAGGTGCATCTACATCCAGTACTGTTGAACAGAGACTTGAACAGATGCTTTGCGAGCAGCTGGTTCTAGTCCGACAGGTTCGTGATGACATGTCTACACAGGGACGAAGATTAGATGGCATGGCTGCATTCTTAGCCACGTTGGGATATCCAGGCATACCGGCTTCTCCTGCACCTTGA

Protein Analysis

189

Amino Acids

21.43

Weight (kDa)

8.39

Isoelectric Point (pI)

51.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000491)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g12100 FvH4_3g12110 FvH4_3g12111 FvH4_3g12120 FvH4_3g12120 FvH4_3g28952 FvH4_6g40660 FvH4_6g40661 FvH4_6g40960
rosa_chinensis RchiOBHm_Chr1g0340941 RchiOBHm_Chr2g0156041 RchiOBHm_Chr2g0156591 RchiOBHm_Chr5g0019791 RchiOBHm_Chr5g0019821
rosa_laevigata RLG00000007998 RLG00000020883 RLG00000020887 RLG00000020922 RLG00000029052 RLG00000032473 RLG00000032474 RLG00000032477 RLG00000032478
rosa_multiflora Rmu_co8231441.1_g000001 Rmu_co8352639.1_g000001 Rmu_co8510723.1_g000001 Rmu_sc0000344.1_g000022 Rmu_sc0000344.1_g000023 Rmu_sc0001145.1_g000015 Rmu_sc0001145.1_g000016 Rmu_sc0001211.1_g000087 Rmu_sc0001319.1_g000003 Rmu_sc0008321.1_g000001 Rmu_sc0011512.1_g000007 Rmu_sc0011922.1_g000003 Rmu_sc0011922.1_g000007 Rmu_ssc0000155.1_g000002 Rmu_ssc0000155.1_g000004
rosa_roxburghii Rroxscaffold_1G00058320 Rroxscaffold_1G00058340 Rroxscaffold_2G00092930 Rroxscaffold_2G00093240 Rroxscaffold_2G00093270 Rroxscaffold_4G00311560 Rroxscaffold_4G00311590 Rroxscaffold_5G00360130
rosa_rugosa Rorug01G0160700.1 Rorug02G0451400 Rorug02G0454400 Rorug02G0454400 Rorug02G0454500 Rorug02G0454600 Rorug05G0054100 Rorug05G0054200 Rorug05G0054300
rosa_samantha Rh1AG175400 Rh1BG143700 Rh1BG143800 Rh1CG163400 Rh1DG175300 Rh1DG175400 Rh1DG175500 Rh2AG518200 Rh2AG518300 Rh2BG529400 Rh2BG532700 Rh2BG533200 Rh2CG502900 Rh2CG503000 Rh2DG538500 Rh2DG538600 Rh2DG541600 Rh2DG542000 Rh4BG200000 Rh4BG200100 Rh5AG144500 Rh5AG144600 Rh5AG366400 Rh5BG143500 Rh5BG143700 Rh5CG155000 Rh5CG155300 Rh5DG143500 Rh7BG257300 Rh7BG257400 Rh7BG257500
rosa_wichuraiana Rw1G014680 Rw2G042670 Rw2G042900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 207
AccI GTMKAC 1 cut(s) 482
AciI CCGC 2 cut(s) 205, 383
AcuI CTGAAG 1 cut(s) 5
AfaI GTAC 2 cut(s) 199, 409
AfiI CCNNNNNNNGG 1 cut(s) 207
AflIII ACRYGT 1 cut(s) 477
AgsI TTSAA 2 cut(s) 416, 428
AhdI GACNNNNNGTC 1 cut(s) 15
AjnI CCWGG 1 cut(s) 538
AluBI AGCT 2 cut(s) 79, 448
AluI AGCT 2 cut(s) 79, 448
Alw21I GWGCWC 1 cut(s) 81
Alw26I GTCTC 2 cut(s) 251, 415
AlwNI CAGNNNCTG 1 cut(s) 207
Ama87I CYCGRG 1 cut(s) 123
ApeKI GCWGC 2 cut(s) 445, 512
ArsI GACNNNNNNTTYG 2 cut(s) 266, 298
AsuHPI GGTGA 1 cut(s) 41
AvaI CYCGRG 1 cut(s) 123
BanII GRGCYC 1 cut(s) 81
BbsI GAAGAC 2 cut(s) 11, 381
Bbv12I GWGCWC 1 cut(s) 81
BbvI GCAGC 2 cut(s) 457, 499
BccI CCATC 1 cut(s) 497
BceAI ACGGC 1 cut(s) 140
BciT130I CCWGG 1 cut(s) 540
BclI TGATCA 1 cut(s) 3
BcoDI GTCTC 2 cut(s) 251, 415
BfaI CTAG 1 cut(s) 455
BfmI CTRYAG 1 cut(s) 291
BisI GCNGC 3 cut(s) 205, 446, 513
BlsI GCNGC 3 cut(s) 206, 447, 514
BmcAI AGTACT 1 cut(s) 409
Bme1390I CCNGG 1 cut(s) 540
BmeRI GACNNNNNGTC 1 cut(s) 15
BmeT110I CYCGRG 1 cut(s) 123
BmrFI CCNGG 1 cut(s) 540
BmsI GCATC 3 cut(s) 71, 404, 423
BpiI GAAGAC 2 cut(s) 11, 381
BpmI CTGGAG 1 cut(s) 229
BsaXI ACNNNNNCTCC 2 cut(s) 33, 63
Bsc4I CCNNNNNNNGG 1 cut(s) 207
Bse118I RCCGGY 1 cut(s) 547
Bse1I ACTGG 2 cut(s) 85, 405
BseBI CCWGG 1 cut(s) 540
BseGI GGATG 2 cut(s) 81, 401
BseLI CCNNNNNNNGG 1 cut(s) 207
BseNI ACTGG 2 cut(s) 85, 405
BseRI GAGGAG 3 cut(s) 317, 326, 375
BseXI GCAGC 2 cut(s) 457, 499
BsgI GTGCAG 1 cut(s) 543
BsiHKAI GWGCWC 1 cut(s) 81
BsiHKCI CYCGRG 1 cut(s) 123
BsiSI CCGG 1 cut(s) 548
BslFI GGGAC 1 cut(s) 504
BslI CCNNNNNNNGG 1 cut(s) 207
BsmAI GTCTC 2 cut(s) 251, 415
BsmFI GGGAC 1 cut(s) 504
BsmI GAATGC 1 cut(s) 515
BsoBI CYCGRG 1 cut(s) 123
Bsp1286I GDGCHC 1 cut(s) 81
Bsp143I GATC 1 cut(s) 3
BspACI CCGC 2 cut(s) 205, 383
BspHI TCATGA 1 cut(s) 6
BsrFI RCCGGY 1 cut(s) 547
BsrI ACTGG 2 cut(s) 85, 405
BssAI RCCGGY 1 cut(s) 547
BssMI GATC 1 cut(s) 3
Bst2UI CCWGG 1 cut(s) 540
Bst4CI ACNGT 1 cut(s) 412
BstC8I GCNNGC 1 cut(s) 443
BstDEI CTNAG 1 cut(s) 520
BstF5I GGATG 2 cut(s) 81, 401
BstKTI GATC 1 cut(s) 6
BstMAI GTCTC 2 cut(s) 251, 415
BstMBI GATC 1 cut(s) 3
BstMWI GCNNNNNNNGC 3 cut(s) 442, 521, 557
BstNI CCWGG 1 cut(s) 540
BstNSI RCATGY 2 cut(s) 280, 481
BstSCI CCNGG 1 cut(s) 538
BstSFI CTRYAG 1 cut(s) 291
BstV1I GCAGC 2 cut(s) 457, 499
BstV2I GAAGAC 2 cut(s) 11, 381
BtsCI GGATG 2 cut(s) 81, 401
Cac8I GCNNGC 1 cut(s) 443
CaiI CAGNNNCTG 1 cut(s) 207
CciI TCATGA 1 cut(s) 6
Cfr10I RCCGGY 1 cut(s) 547
CseI GACGC 1 cut(s) 5
Csp6I GTAC 2 cut(s) 198, 408
CviAII CATG 6 cut(s) 7, 242, 277, 340, 478, 508
CviJI RGCY 8 cut(s) 79, 155, 204, 229, 448, 512, 524, 551
CviKI_1 RGCY 8 cut(s) 79, 155, 204, 229, 448, 512, 524, 551
CviQI GTAC 2 cut(s) 198, 408
DdeI CTNAG 1 cut(s) 520
DpnI GATC 1 cut(s) 5
DpnII GATC 1 cut(s) 3
DriI GACNNNNNGTC 1 cut(s) 15
Eam1105I GACNNNNNGTC 1 cut(s) 15
Ecl136II GAGCTC 1 cut(s) 79
Eco24I GRGCYC 1 cut(s) 81
Eco32I GATATC 1 cut(s) 536
Eco53kI GAGCTC 1 cut(s) 79
Eco57I CTGAAG 1 cut(s) 5
Eco88I CYCGRG 1 cut(s) 123
EcoICRI GAGCTC 1 cut(s) 79
EcoRII CCWGG 1 cut(s) 538
EcoRV GATATC 1 cut(s) 536
EcoT38I GRGCYC 1 cut(s) 81
FaeI CATG 6 cut(s) 10, 245, 280, 343, 481, 511
FaqI GGGAC 1 cut(s) 504
FatI CATG 6 cut(s) 6, 241, 276, 339, 477, 507
FbaI TGATCA 1 cut(s) 3
FblI GTMKAC 1 cut(s) 482
Fnu4HI GCNGC 3 cut(s) 205, 446, 513
FokI GGATG 2 cut(s) 68, 388
FriOI GRGCYC 1 cut(s) 81
Fsp4HI GCNGC 3 cut(s) 205, 446, 513
FspBI CTAG 1 cut(s) 455
GluI GCNGC 3 cut(s) 205, 446, 513
GsuI CTGGAG 1 cut(s) 229
HapII CCGG 1 cut(s) 548
HgaI GACGC 1 cut(s) 5
Hin1II CATG 6 cut(s) 10, 245, 280, 343, 481, 511
HinfI GANTC 2 cut(s) 314, 365
HpaII CCGG 1 cut(s) 548
HphI GGTGA 1 cut(s) 41
Hpy166II GTNNAC 1 cut(s) 483
Hpy188I TCNGA 2 cut(s) 24, 461
Hpy188III TCNNGA 3 cut(s) 7, 369, 470
Hpy8I GTNNAC 1 cut(s) 483
HpyCH4III ACNGT 1 cut(s) 412
HpyCH4IV ACGT 3 cut(s) 196, 378, 527
HpyCH4V TGCA 4 cut(s) 280, 395, 515, 560
HpyF10VI GCNNNNNNNGC 3 cut(s) 442, 521, 557
HpyF3I CTNAG 1 cut(s) 520
HpySE526I ACGT 3 cut(s) 196, 378, 527
Hsp92II CATG 6 cut(s) 10, 245, 280, 343, 481, 511
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 1 cut(s) 3
Lsp1109I GCAGC 2 cut(s) 457, 499
LweI GCATC 3 cut(s) 71, 404, 423
MaeI CTAG 1 cut(s) 455
MaeII ACGT 3 cut(s) 196, 378, 527
MaeIII GTNAC 2 cut(s) 186, 385
MalI GATC 1 cut(s) 5
MboI GATC 1 cut(s) 3
MboII GAAGA 5 cut(s) 11, 340, 346, 386, 507
MhlI GDGCHC 1 cut(s) 81
MluCI AATT 3 cut(s) 55, 296, 344
MlyI GAGTC 1 cut(s) 323
MmeI TCCRAC 1 cut(s) 484
MnlI CCTC 5 cut(s) 37, 204, 295, 304, 353
MseI TTAA 2 cut(s) 53, 264
MspA1I CMGCKG 2 cut(s) 207, 448
MspI CCGG 1 cut(s) 548
MspR9I CCNGG 1 cut(s) 540
Mva1269I GAATGC 1 cut(s) 515
MvaI CCWGG 1 cut(s) 540
MwoI GCNNNNNNNGC 3 cut(s) 442, 521, 557
NdeII GATC 1 cut(s) 3
NlaIII CATG 6 cut(s) 10, 245, 280, 343, 481, 511
NspI RCATGY 2 cut(s) 280, 481
PagI TCATGA 1 cut(s) 6
PciI ACATGT 1 cut(s) 477
PctI GAATGC 1 cut(s) 515
PfeI GAWTC 1 cut(s) 365
PflMI CCANNNNNTGG 1 cut(s) 207
PkrI GCNGC 3 cut(s) 206, 447, 514
PleI GAGTC 1 cut(s) 322
PpsI GAGTC 1 cut(s) 322
PscI ACATGT 1 cut(s) 477
Psp124BI GAGCTC 1 cut(s) 81
Psp6I CCWGG 1 cut(s) 538
PspGI CCWGG 1 cut(s) 538
PstNI CAGNNNCTG 1 cut(s) 207
PvuII CAGCTG 1 cut(s) 448
RsaI GTAC 2 cut(s) 199, 409
RsaNI GTAC 2 cut(s) 198, 408
SacI GAGCTC 1 cut(s) 81
SaqAI TTAA 2 cut(s) 53, 264
SatI GCNGC 3 cut(s) 205, 446, 513
Sau3AI GATC 1 cut(s) 3
ScaI AGTACT 1 cut(s) 409
SchI GAGTC 1 cut(s) 323
ScrFI CCNGG 1 cut(s) 540
SduI GDGCHC 1 cut(s) 81
SetI ASST 9 cut(s) 31, 81, 199, 381, 394, 450, 468, 530, 565
SfaNI GCATC 3 cut(s) 71, 404, 423
SfcI CTRYAG 1 cut(s) 291
Sse9I AATT 3 cut(s) 55, 296, 344
SsiI CCGC 2 cut(s) 205, 383
SspMI CTAG 1 cut(s) 455
SstI GAGCTC 1 cut(s) 81
StyD4I CCNGG 1 cut(s) 538
TaaI ACNGT 1 cut(s) 412
TaiI ACGT 3 cut(s) 199, 381, 530
TaqI TCGA 2 cut(s) 119, 150
TasI AATT 3 cut(s) 55, 296, 344
TatI WGTACW 1 cut(s) 407
TauI GCSGC 1 cut(s) 207
TfiI GAWTC 1 cut(s) 365
Tru1I TTAA 2 cut(s) 53, 264
Tru9I TTAA 2 cut(s) 53, 264
TseI GCWGC 2 cut(s) 445, 512
TspDTI ATGAA 3 cut(s) 83, 341, 347
Van91I CCANNNNNTGG 1 cut(s) 207
XceI RCATGY 2 cut(s) 280, 481
XmiI GTMKAC 1 cut(s) 482
XspI CTAG 1 cut(s) 455
ZrmI AGTACT 1 cut(s) 409
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.