Cyclic nucleotide-gated ion channel 1-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 653 |
| AccII | CGCG | 3 cut(s) | 470, 1723, 1734 |
| AciI | CCGC | 2 cut(s) | 547, 888 |
| AclWI | GGATC | 5 cut(s) | 80, 1208, 1730, 1895, 1932 |
| AcsI | RAATTY | 5 cut(s) | 216, 1015, 1028, 1060, 1818 |
| AcuI | CTGAAG | 1 cut(s) | 1949 |
| AfaI | GTAC | 5 cut(s) | 770, 898, 1176, 1405, 1598 |
| AfeI | AGCGCT | 2 cut(s) | 372, 1718 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 346, 457, 589, 1884, 1972 |
| AflIII | ACRYGT | 1 cut(s) | 468 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 469 |
| AjnI | CCWGG | 1 cut(s) | 1306 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1671, 1703 |
| AluBI | AGCT | 7 cut(s) | 161, 502, 521, 569, 1098, 1787, 1846 |
| AluI | AGCT | 7 cut(s) | 161, 502, 521, 569, 1098, 1787, 1846 |
| Alw21I | GWGCWC | 1 cut(s) | 1649 |
| Alw26I | GTCTC | 3 cut(s) | 8, 188, 1548 |
| AlwI | GGATC | 5 cut(s) | 80, 1208, 1730, 1895, 1932 |
| Ama87I | CYCGRG | 1 cut(s) | 1823 |
| Aor51HI | AGCGCT | 2 cut(s) | 372, 1718 |
| AoxI | GGCC | 3 cut(s) | 448, 1051, 1860 |
| ApaI | GGGCCC | 1 cut(s) | 452 |
| ApeKI | GCWGC | 3 cut(s) | 794, 1095, 1872 |
| ApoI | RAATTY | 5 cut(s) | 216, 1015, 1028, 1060, 1818 |
| ArsI | GACNNNNNNTTYG | 3 cut(s) | 1645, 1677, 2118 |
| AseI | ATTAAT | 1 cut(s) | 1944 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1686 |
| AspLEI | GCGC | 4 cut(s) | 373, 1719, 1725, 2055 |
| AspS9I | GGNCC | 6 cut(s) | 224, 448, 449, 841, 1051, 1861 |
| AsuHPI | GGTGA | 2 cut(s) | 734, 1322 |
| AsuII | TTCGAA | 2 cut(s) | 176, 1480 |
| AvaI | CYCGRG | 1 cut(s) | 1823 |
| AvaII | GGWCC | 2 cut(s) | 224, 841 |
| AxyI | CCTNAGG | 2 cut(s) | 683, 1920 |
| BaeGI | GKGCMC | 1 cut(s) | 452 |
| BanII | GRGCYC | 2 cut(s) | 452, 1524 |
| BbsI | GAAGAC | 1 cut(s) | 661 |
| Bbv12I | GWGCWC | 1 cut(s) | 1649 |
| BbvI | GCAGC | 3 cut(s) | 806, 1107, 1884 |
| BccI | CCATC | 6 cut(s) | 55, 62, 323, 587, 1604, 2064 |
| BceAI | ACGGC | 1 cut(s) | 517 |
| BciT130I | CCWGG | 1 cut(s) | 1308 |
| BclI | TGATCA | 1 cut(s) | 426 |
| BcoDI | GTCTC | 3 cut(s) | 8, 188, 1548 |
| BfaI | CTAG | 6 cut(s) | 137, 221, 566, 1355, 1952, 1970 |
| BfmI | CTRYAG | 1 cut(s) | 936 |
| BfoI | RGCGCY | 3 cut(s) | 374, 1720, 2056 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2061 |
| BisI | GCNGC | 3 cut(s) | 795, 1096, 1873 |
| BlsI | GCNGC | 3 cut(s) | 796, 1097, 1874 |
| BmcAI | AGTACT | 1 cut(s) | 898 |
| Bme1390I | CCNGG | 1 cut(s) | 1308 |
| Bme18I | GGWCC | 2 cut(s) | 224, 841 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 469 |
| BmeT110I | CYCGRG | 1 cut(s) | 1823 |
| BmgT120I | GGNCC | 6 cut(s) | 224, 448, 449, 841, 1051, 1861 |
| BmiI | GGNNCC | 5 cut(s) | 450, 451, 842, 1052, 1916 |
| BmrFI | CCNGG | 1 cut(s) | 1308 |
| BmrI | ACTGGG | 1 cut(s) | 65 |
| BmsI | GCATC | 6 cut(s) | 519, 558, 857, 1372, 1621, 1978 |
| BmuI | ACTGGG | 1 cut(s) | 65 |
| BpiI | GAAGAC | 1 cut(s) | 661 |
| Bpu14I | TTCGAA | 2 cut(s) | 176, 1480 |
| Bsa29I | ATCGAT | 1 cut(s) | 321 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1734 |
| BsaI | GGTCTC | 1 cut(s) | 8 |
| BsaJI | CCNNGG | 1 cut(s) | 533 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 85, 115, 1569, 1599, 1671, 1701 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 346, 457, 589, 1884, 1972 |
| Bse118I | RCCGGY | 1 cut(s) | 1965 |
| Bse1I | ACTGG | 3 cut(s) | 60, 89, 1901 |
| Bse21I | CCTNAGG | 2 cut(s) | 683, 1920 |
| Bse3DI | GCAATG | 1 cut(s) | 774 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1734 |
| BseBI | CCWGG | 1 cut(s) | 1308 |
| BseCI | ATCGAT | 1 cut(s) | 321 |
| BseDI | CCNNGG | 1 cut(s) | 533 |
| BseJI | GATNNNNATC | 1 cut(s) | 1734 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 346, 457, 589, 1884, 1972 |
| BseMI | GCAATG | 1 cut(s) | 774 |
| BseMII | CTCAG | 4 cut(s) | 394, 674, 1212, 1911 |
| BseNI | ACTGG | 3 cut(s) | 60, 89, 1901 |
| BseRI | GAGGAG | 2 cut(s) | 1593, 1596 |
| BseSI | GKGCMC | 1 cut(s) | 452 |
| BseXI | GCAGC | 3 cut(s) | 806, 1107, 1884 |
| Bsh1236I | CGCG | 3 cut(s) | 470, 1723, 1734 |
| BshFI | GGCC | 3 cut(s) | 450, 1053, 1862 |
| BshVI | ATCGAT | 1 cut(s) | 321 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1649 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1823 |
| BsiSI | CCGG | 1 cut(s) | 1966 |
| BslFI | GGGAC | 1 cut(s) | 854 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 346, 457, 589, 1884, 1972 |
| BsmAI | GTCTC | 3 cut(s) | 8, 188, 1548 |
| BsmBI | CGTCTC | 1 cut(s) | 1548 |
| BsmFI | GGGAC | 1 cut(s) | 854 |
| BsmI | GAATGC | 3 cut(s) | 1628, 2019, 2074 |
| BsnI | GGCC | 3 cut(s) | 450, 1053, 1862 |
| Bso31I | GGTCTC | 1 cut(s) | 8 |
| BsoBI | CYCGRG | 1 cut(s) | 1823 |
| Bsp119I | TTCGAA | 2 cut(s) | 176, 1480 |
| Bsp120I | GGGCCC | 1 cut(s) | 448 |
| Bsp1286I | GDGCHC | 3 cut(s) | 452, 1524, 1649 |
| Bsp1407I | TGTACA | 2 cut(s) | 768, 1174 |
| Bsp68I | TCGCGA | 1 cut(s) | 1734 |
| BspACI | CCGC | 2 cut(s) | 547, 888 |
| BspANI | GGCC | 3 cut(s) | 450, 1053, 1862 |
| BspCNI | CTCAG | 4 cut(s) | 393, 675, 1213, 1912 |
| BspDI | ATCGAT | 1 cut(s) | 321 |
| BspFNI | CGCG | 3 cut(s) | 470, 1723, 1734 |
| BspHI | TCATGA | 3 cut(s) | 979, 1294, 1329 |
| BspLI | GGNNCC | 5 cut(s) | 450, 451, 842, 1052, 1916 |
| BspPI | GGATC | 5 cut(s) | 80, 1208, 1730, 1895, 1932 |
| BspT104I | TTCGAA | 2 cut(s) | 176, 1480 |
| BspTNI | GGTCTC | 1 cut(s) | 8 |
| BsrDI | GCAATG | 1 cut(s) | 774 |
| BsrFI | RCCGGY | 1 cut(s) | 1965 |
| BsrGI | TGTACA | 2 cut(s) | 768, 1174 |
| BsrI | ACTGG | 3 cut(s) | 60, 89, 1901 |
| BssAI | RCCGGY | 1 cut(s) | 1965 |
| BssECI | CCNNGG | 1 cut(s) | 533 |
| Bst2UI | CCWGG | 1 cut(s) | 1308 |
| Bst4CI | ACNGT | 4 cut(s) | 127, 730, 1756, 2112 |
| Bst6I | CTCTTC | 1 cut(s) | 1746 |
| BstAUI | TGTACA | 2 cut(s) | 768, 1174 |
| BstBI | TTCGAA | 2 cut(s) | 176, 1480 |
| BstC8I | GCNNGC | 4 cut(s) | 781, 872, 1145, 1721 |
| BstDEI | CTNAG | 5 cut(s) | 380, 522, 683, 1221, 1920 |
| BstDSI | CCRYGG | 1 cut(s) | 533 |
| BstFNI | CGCG | 3 cut(s) | 470, 1723, 1734 |
| BstH2I | RGCGCY | 3 cut(s) | 374, 1720, 2056 |
| BstHHI | GCGC | 4 cut(s) | 373, 1719, 1725, 2055 |
| BstMAI | GTCTC | 3 cut(s) | 8, 188, 1548 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1731, 2061 |
| BstNI | CCWGG | 1 cut(s) | 1308 |
| BstNSI | RCATGY | 2 cut(s) | 852, 874 |
| BstSCI | CCNGG | 1 cut(s) | 1306 |
| BstSFI | CTRYAG | 1 cut(s) | 936 |
| BstSLI | GKGCMC | 1 cut(s) | 452 |
| BstUI | CGCG | 3 cut(s) | 470, 1723, 1734 |
| BstV1I | GCAGC | 3 cut(s) | 806, 1107, 1884 |
| BstV2I | GAAGAC | 1 cut(s) | 661 |
| BstX2I | RGATCY | 2 cut(s) | 85, 1924 |
| BstYI | RGATCY | 2 cut(s) | 85, 1924 |
| Bsu15I | ATCGAT | 1 cut(s) | 321 |
| Bsu36I | CCTNAGG | 2 cut(s) | 683, 1920 |
| BsuRI | GGCC | 3 cut(s) | 450, 1053, 1862 |
| BsuTUI | ATCGAT | 1 cut(s) | 321 |
| BtgI | CCRYGG | 1 cut(s) | 533 |
| BtgZI | GCGATG | 1 cut(s) | 382 |
| BtsI | GCAGTG | 2 cut(s) | 288, 1797 |
| BtsIMutI | CAGTG | 4 cut(s) | 53, 288, 1522, 1797 |
| BtuMI | TCGCGA | 1 cut(s) | 1734 |
| Cac8I | GCNNGC | 4 cut(s) | 781, 872, 1145, 1721 |
| CciI | TCATGA | 3 cut(s) | 979, 1294, 1329 |
| CfoI | GCGC | 4 cut(s) | 373, 1719, 1725, 2055 |
| Cfr10I | RCCGGY | 1 cut(s) | 1965 |
| Cfr13I | GGNCC | 6 cut(s) | 224, 448, 449, 841, 1051, 1861 |
| ClaI | ATCGAT | 1 cut(s) | 321 |
| CseI | GACGC | 3 cut(s) | 459, 465, 1649 |
| Csp6I | GTAC | 5 cut(s) | 769, 897, 1175, 1404, 1597 |
| CviQI | GTAC | 5 cut(s) | 769, 897, 1175, 1404, 1597 |
| DdeI | CTNAG | 5 cut(s) | 380, 522, 683, 1221, 1920 |
| DriI | GACNNNNNGTC | 1 cut(s) | 469 |
| Eam1104I | CTCTTC | 1 cut(s) | 1746 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 469 |
| EarI | CTCTTC | 1 cut(s) | 1746 |
| Eco24I | GRGCYC | 2 cut(s) | 452, 1524 |
| Eco31I | GGTCTC | 1 cut(s) | 8 |
| Eco47I | GGWCC | 2 cut(s) | 224, 841 |
| Eco47III | AGCGCT | 2 cut(s) | 372, 1718 |
| Eco57I | CTGAAG | 1 cut(s) | 1949 |
| Eco81I | CCTNAGG | 2 cut(s) | 683, 1920 |
| Eco88I | CYCGRG | 1 cut(s) | 1823 |
| EcoO109I | RGGNCCY | 3 cut(s) | 448, 449, 1051 |
| EcoRI | GAATTC | 1 cut(s) | 216 |
| EcoRII | CCWGG | 1 cut(s) | 1306 |
| EcoT22I | ATGCAT | 2 cut(s) | 872, 2132 |
| EcoT38I | GRGCYC | 2 cut(s) | 452, 1524 |
| Esp3I | CGTCTC | 1 cut(s) | 1548 |
| FaqI | GGGAC | 1 cut(s) | 854 |
| FauNDI | CATATG | 2 cut(s) | 149, 1103 |
| FbaI | TGATCA | 1 cut(s) | 426 |
| Fnu4HI | GCNGC | 3 cut(s) | 795, 1096, 1873 |
| FriOI | GRGCYC | 2 cut(s) | 452, 1524 |
| Fsp4HI | GCNGC | 3 cut(s) | 795, 1096, 1873 |
| FspBI | CTAG | 6 cut(s) | 137, 221, 566, 1355, 1952, 1970 |
| GlaI | GCGC | 4 cut(s) | 372, 1718, 1724, 2054 |
| GluI | GCNGC | 3 cut(s) | 795, 1096, 1873 |
| HaeII | RGCGCY | 3 cut(s) | 374, 1720, 2056 |
| HaeIII | GGCC | 3 cut(s) | 450, 1053, 1862 |
| HapII | CCGG | 1 cut(s) | 1966 |
| HgaI | GACGC | 3 cut(s) | 459, 465, 1649 |
| HhaI | GCGC | 4 cut(s) | 373, 1719, 1725, 2055 |
| Hin6I | GCGC | 4 cut(s) | 371, 1717, 1723, 2053 |
| HinP1I | GCGC | 4 cut(s) | 371, 1717, 1723, 2053 |
| HincII | GTYRAC | 1 cut(s) | 559 |
| HindII | GTYRAC | 1 cut(s) | 559 |
| HindIII | AAGCTT | 2 cut(s) | 500, 1785 |
| HinfI | GANTC | 3 cut(s) | 293, 941, 1007 |
| HpaII | CCGG | 1 cut(s) | 1966 |
| HphI | GGTGA | 2 cut(s) | 734, 1322 |
| Hpy166II | GTNNAC | 5 cut(s) | 28, 145, 559, 1175, 1797 |
| Hpy188I | TCNGA | 9 cut(s) | 157, 215, 383, 426, 614, 1222, 1729, 1843, 1929 |
| Hpy8I | GTNNAC | 5 cut(s) | 28, 145, 559, 1175, 1797 |
| Hpy99I | CGWCG | 1 cut(s) | 1665 |
| HpyAV | CCTTC | 2 cut(s) | 1535, 1924 |
| HpyCH4III | ACNGT | 4 cut(s) | 127, 730, 1756, 2112 |
| HpyCH4IV | ACGT | 3 cut(s) | 356, 481, 657 |
| HpyCH4V | TGCA | 9 cut(s) | 242, 281, 794, 863, 870, 953, 1121, 1626, 2130 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1731, 2061 |
| HpyF3I | CTNAG | 5 cut(s) | 380, 522, 683, 1221, 1920 |
| HpySE526I | ACGT | 3 cut(s) | 356, 481, 657 |
| HspAI | GCGC | 4 cut(s) | 371, 1717, 1723, 2053 |
| Ksp22I | TGATCA | 1 cut(s) | 426 |
| LmnI | GCTCC | 1 cut(s) | 166 |
| Lsp1109I | GCAGC | 3 cut(s) | 806, 1107, 1884 |
| LweI | GCATC | 6 cut(s) | 519, 558, 857, 1372, 1621, 1978 |
| MaeI | CTAG | 6 cut(s) | 137, 221, 566, 1355, 1952, 1970 |
| MaeII | ACGT | 3 cut(s) | 356, 481, 657 |
| MaeIII | GTNAC | 5 cut(s) | 51, 91, 477, 722, 1664 |
| MflI | RGATCY | 2 cut(s) | 85, 1924 |
| MhlI | GDGCHC | 3 cut(s) | 452, 1524, 1649 |
| MluI | ACGCGT | 1 cut(s) | 468 |
| MmeI | TCCRAC | 3 cut(s) | 712, 1830, 2094 |
| Mph1103I | ATGCAT | 2 cut(s) | 872, 2132 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1686 |
| MseI | TTAA | 6 cut(s) | 711, 990, 1064, 1238, 1832, 1944 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1368 |
| MspI | CCGG | 1 cut(s) | 1966 |
| MspR9I | CCNGG | 1 cut(s) | 1308 |
| Mva1269I | GAATGC | 3 cut(s) | 1628, 2019, 2074 |
| MvaI | CCWGG | 1 cut(s) | 1308 |
| MvnI | CGCG | 3 cut(s) | 470, 1723, 1734 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1731, 2061 |
| NdeI | CATATG | 2 cut(s) | 149, 1103 |
| NlaIV | GGNNCC | 5 cut(s) | 450, 451, 842, 1052, 1916 |
| NmeAIII | GCCGAG | 1 cut(s) | 2040 |
| NmuCI | GTSAC | 4 cut(s) | 51, 91, 477, 722 |
| NruI | TCGCGA | 1 cut(s) | 1734 |
| NsiI | ATGCAT | 2 cut(s) | 872, 2132 |
| NspI | RCATGY | 2 cut(s) | 852, 874 |
| NspV | TTCGAA | 2 cut(s) | 176, 1480 |
| PaeI | GCATGC | 1 cut(s) | 874 |
| PaeR7I | CTCGAG | 1 cut(s) | 1823 |
| PagI | TCATGA | 3 cut(s) | 979, 1294, 1329 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 353, 1821 |
| PctI | GAATGC | 3 cut(s) | 1628, 2019, 2074 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1686 |
| PfeI | GAWTC | 3 cut(s) | 293, 941, 1007 |
| PkrI | GCNGC | 3 cut(s) | 796, 1097, 1874 |
| PshBI | ATTAAT | 1 cut(s) | 1944 |
| PsiI | TTATAA | 1 cut(s) | 653 |
| Psp6I | CCWGG | 1 cut(s) | 1306 |
| PspGI | CCWGG | 1 cut(s) | 1306 |
| PspN4I | GGNNCC | 5 cut(s) | 450, 451, 842, 1052, 1916 |
| PspOMI | GGGCCC | 1 cut(s) | 448 |
| PspPI | GGNCC | 6 cut(s) | 224, 448, 449, 841, 1051, 1861 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 27, 59 |
| PsuI | RGATCY | 2 cut(s) | 85, 1924 |
| RruI | TCGCGA | 1 cut(s) | 1734 |
| RsaI | GTAC | 5 cut(s) | 770, 898, 1176, 1405, 1598 |
| RsaNI | GTAC | 5 cut(s) | 769, 897, 1175, 1404, 1597 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1368 |
| SaqAI | TTAA | 6 cut(s) | 711, 990, 1064, 1238, 1832, 1944 |
| SatI | GCNGC | 3 cut(s) | 795, 1096, 1873 |
| Sau96I | GGNCC | 6 cut(s) | 224, 448, 449, 841, 1051, 1861 |
| ScaI | AGTACT | 1 cut(s) | 898 |
| ScrFI | CCNGG | 1 cut(s) | 1308 |
| SduI | GDGCHC | 3 cut(s) | 452, 1524, 1649 |
| SfaNI | GCATC | 6 cut(s) | 519, 558, 857, 1372, 1621, 1978 |
| SfcI | CTRYAG | 1 cut(s) | 936 |
| Sfr274I | CTCGAG | 1 cut(s) | 1823 |
| SfuI | TTCGAA | 2 cut(s) | 176, 1480 |
| SinI | GGWCC | 2 cut(s) | 224, 841 |
| SlaI | CTCGAG | 1 cut(s) | 1823 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1368 |
| SmlI | CTYRAG | 1 cut(s) | 1823 |
| SmoI | CTYRAG | 1 cut(s) | 1823 |
| SphI | GCATGC | 1 cut(s) | 874 |
| SsiI | CCGC | 2 cut(s) | 547, 888 |
| SspI | AATATT | 3 cut(s) | 677, 1339, 1704 |
| SspMI | CTAG | 6 cut(s) | 137, 221, 566, 1355, 1952, 1970 |
| StyD4I | CCNGG | 1 cut(s) | 1306 |
| TaaI | ACNGT | 4 cut(s) | 127, 730, 1756, 2112 |
| TaiI | ACGT | 3 cut(s) | 359, 484, 660 |
| TatI | WGTACW | 5 cut(s) | 768, 896, 1174, 1403, 1596 |
| TfiI | GAWTC | 3 cut(s) | 293, 941, 1007 |
| Tru1I | TTAA | 6 cut(s) | 711, 990, 1064, 1238, 1832, 1944 |
| Tru9I | TTAA | 6 cut(s) | 711, 990, 1064, 1238, 1832, 1944 |
| TscAI | CASTG | 4 cut(s) | 60, 288, 1522, 1804 |
| TseFI | GTSAC | 4 cut(s) | 51, 91, 477, 722 |
| TseI | GCWGC | 3 cut(s) | 794, 1095, 1872 |
| Tsp45I | GTSAC | 4 cut(s) | 51, 91, 477, 722 |
| TspGWI | ACGGA | 4 cut(s) | 362, 1425, 1900, 2000 |
| TspRI | CASTG | 4 cut(s) | 60, 288, 1522, 1804 |
| VpaK11BI | GGWCC | 2 cut(s) | 224, 841 |
| VspI | ATTAAT | 1 cut(s) | 1944 |
| XapI | RAATTY | 5 cut(s) | 216, 1015, 1028, 1060, 1818 |
| XceI | RCATGY | 2 cut(s) | 852, 874 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 586 |
| XhoI | CTCGAG | 1 cut(s) | 1823 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1686 |
| XspI | CTAG | 6 cut(s) | 137, 221, 566, 1355, 1952, 1970 |
| ZrmI | AGTACT | 1 cut(s) | 898 |
| Zsp2I | ATGCAT | 2 cut(s) | 872, 2132 |