Rmu_sc0001145.1_g000015

voltage-gated potassium channel activity

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001145.1
Physical Location & Seq
Reverse (-)
65910 .. 69330
3421 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001145.1_g000015.1.cds

Sequence Viewer

Length: 1260 bp
atgcttcaaaagatggatgaaaacgggttgaaaagcttgtgcgagtacatgaagccagtgatatacaaggagagtgacagcattgttaaagagacagatcaccagcttgatcaaatgatcttcatcatacaaggtgaaattgaatgcaccaacaaattcatgataagccaccctattcctctagagaaaggtgattattttggagaagaaatcgaaacttgggcatcgttaaactacatgaagtcttattatgaccctcttcctacttcaaccggacgtgtaagatgtctaaaaaaggtagaagcctttgcactcaaggccttcgacttgttaacatttgcccagcaaaacttgaaccagtccaacattaatcctgcgcagttggaaaagttggcacttgaccaccacaacactgttcatccgactctatacatgcatcctattgagcgctggaaatgtcctgagcatggttgggtgaaactaaatgttagtgctgtctggaatcctgcttctaagcgggcagttatgggatgtgtttgcaggaatgagcgaggagttttcatgattgctggaactaatggtgctctttcaccattcagggacgcatttcttgctgaagcttccagtattgactgggctatcgatttctgtcagcaacatgttaatctgaaagccggcatcgggattgttgtcgagtctgataaccaggatctcatcgactgcctcaatgggccgtctttggctacgaacgaaagaactagtaaaatcctcctgcccatccttgaaaatattcgttcccctaagtggctaatttcgtccctcaaggaggatagcccactcctttacatagaacacgacttggaattgggtcggaataacgacttcgaagaaacttctccgcctaatggtgcttctgacgctgaggacatatttacactgctggcagaggggtctcagatcgagccgttgtctgatgaaaattcagacaacggtggaacactattgtctaagaaacaaacagacaacgggtatgtgttaaacatgttgtctgatagcttggcagatgccaggcacagctgcgcggcaggtgcggcgctaccttcagacaacagtgcttgttttcaagctattatggctaatccaactcgacctgaatttgacattttggactcagacggacttgagtaccaccgttgggtttccgatgtagaaactgcctttgtggcaaaagactacactgccacttttcatatcgcctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

419

Amino Acids

46.81

Weight (kDa)

4.78

Isoelectric Point (pI)

49.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000491)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g12100 FvH4_3g12110 FvH4_3g12111 FvH4_3g12120 FvH4_3g12120 FvH4_3g28952 FvH4_6g40660 FvH4_6g40661 FvH4_6g40960
rosa_chinensis RchiOBHm_Chr1g0340941 RchiOBHm_Chr2g0156041 RchiOBHm_Chr2g0156591 RchiOBHm_Chr5g0019791 RchiOBHm_Chr5g0019821
rosa_laevigata RLG00000007998 RLG00000020883 RLG00000020887 RLG00000020922 RLG00000029052 RLG00000032473 RLG00000032474 RLG00000032477 RLG00000032478
rosa_multiflora Rmu_co8231441.1_g000001 Rmu_co8352639.1_g000001 Rmu_co8510723.1_g000001 Rmu_sc0000344.1_g000022 Rmu_sc0000344.1_g000023 Rmu_sc0001145.1_g000015 Rmu_sc0001145.1_g000016 Rmu_sc0001211.1_g000087 Rmu_sc0001319.1_g000003 Rmu_sc0008321.1_g000001 Rmu_sc0011512.1_g000007 Rmu_sc0011922.1_g000003 Rmu_sc0011922.1_g000007 Rmu_ssc0000155.1_g000002 Rmu_ssc0000155.1_g000004
rosa_roxburghii Rroxscaffold_1G00058320 Rroxscaffold_1G00058340 Rroxscaffold_2G00092930 Rroxscaffold_2G00093240 Rroxscaffold_2G00093270 Rroxscaffold_4G00311560 Rroxscaffold_4G00311590 Rroxscaffold_5G00360130
rosa_rugosa Rorug01G0160700.1 Rorug02G0451400 Rorug02G0454400 Rorug02G0454400 Rorug02G0454500 Rorug02G0454600 Rorug05G0054100 Rorug05G0054200 Rorug05G0054300
rosa_samantha Rh1AG175400 Rh1BG143700 Rh1BG143800 Rh1CG163400 Rh1DG175300 Rh1DG175400 Rh1DG175500 Rh2AG518200 Rh2AG518300 Rh2BG529400 Rh2BG532700 Rh2BG533200 Rh2CG502900 Rh2CG503000 Rh2DG538500 Rh2DG538600 Rh2DG541600 Rh2DG542000 Rh4BG200000 Rh4BG200100 Rh5AG144500 Rh5AG144600 Rh5AG366400 Rh5BG143500 Rh5BG143700 Rh5CG155000 Rh5CG155300 Rh5DG143500 Rh7BG257300 Rh7BG257400 Rh7BG257500
rosa_wichuraiana Rw1G014680 Rw2G042670 Rw2G042900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1076
Acc16I TGCGCA 1 cut(s) 378
Acc36I ACCTGC 1 cut(s) 1076
AccII CGCG 1 cut(s) 1082
AciI CCGC 4 cut(s) 517, 899, 1082, 1091
AclWI GGATC 1 cut(s) 717
AcsI RAATTY 3 cut(s) 155, 979, 1154
AcuI CTGAAG 2 cut(s) 636, 1086
AfaI GTAC 2 cut(s) 47, 1187
AfeI AGCGCT 1 cut(s) 449
AfiI CCNNNNNNNGG 6 cut(s) 467, 681, 804, 826, 905, 1195
AflIII ACRYGT 3 cut(s) 277, 658, 1041
AgsI TTSAA 7 cut(s) 8, 31, 143, 270, 355, 785, 1124
AhlI ACTAGT 1 cut(s) 758
AjiI CACGTC 1 cut(s) 278
AjnI CCWGG 2 cut(s) 705, 1067
AluBI AGCT 6 cut(s) 36, 106, 620, 1056, 1077, 1127
AluI AGCT 6 cut(s) 36, 106, 620, 1056, 1077, 1127
Alw21I GWGCWC 1 cut(s) 586
Alw26I GTCTC 2 cut(s) 86, 957
AlwI GGATC 1 cut(s) 717
Aor51HI AGCGCT 1 cut(s) 449
AoxI GGCC 2 cut(s) 318, 731
ApeKI GCWGC 1 cut(s) 1077
ApoI RAATTY 3 cut(s) 155, 979, 1154
AseI ATTAAT 1 cut(s) 369
Asp700I GAANNNNTTC 1 cut(s) 789
AspLEI GCGC 4 cut(s) 379, 450, 1082, 1096
AspS9I GGNCC 1 cut(s) 731
AsuHPI GGTGA 5 cut(s) 92, 146, 203, 487, 582
AsuII TTCGAA 1 cut(s) 885
BaeI ACNNNNGTAYC 2 cut(s) 1169, 1202
Bbv12I GWGCWC 1 cut(s) 586
BbvCI CCTCAGC 1 cut(s) 921
BbvI GCAGC 1 cut(s) 1064
BccI CCATC 2 cut(s) 7, 785
BceAI ACGGC 2 cut(s) 718, 949
BciT130I CCWGG 2 cut(s) 707, 1069
BclI TGATCA 1 cut(s) 109
BcoDI GTCTC 2 cut(s) 86, 957
BcuI ACTAGT 1 cut(s) 758
BfaI CTAG 2 cut(s) 182, 759
BfoI RGCGCY 2 cut(s) 451, 1097
BfuAI ACCTGC 1 cut(s) 1076
BglI GCCNNNNNGGC 1 cut(s) 1223
BisI GCNGC 3 cut(s) 1078, 1083, 1092
BlsI GCNGC 3 cut(s) 1079, 1084, 1093
Bme1390I CCNGG 2 cut(s) 707, 1069
BmgBI CACGTC 1 cut(s) 278
BmgT120I GGNCC 1 cut(s) 731
BmrFI CCNGG 2 cut(s) 707, 1069
BmrI ACTGGG 1 cut(s) 643
BmsI GCATC 4 cut(s) 233, 445, 687, 1054
BmuI ACTGGG 1 cut(s) 643
Bpu10I CCTNAGC 2 cut(s) 462, 921
Bpu14I TTCGAA 1 cut(s) 885
BpuEI CTTGAG 3 cut(s) 299, 806, 1202
Bsa29I ATCGAT 1 cut(s) 642
BsaBI GATNNNNATC 1 cut(s) 122
BsaI GGTCTC 1 cut(s) 957
BsaWI WCCGGW 1 cut(s) 272
Bsc4I CCNNNNNNNGG 6 cut(s) 467, 681, 804, 826, 905, 1195
Bse118I RCCGGY 1 cut(s) 674
Bse1I ACTGG 4 cut(s) 56, 358, 624, 638
Bse8I GATNNNNATC 1 cut(s) 122
BseBI CCWGG 2 cut(s) 707, 1069
BseCI ATCGAT 1 cut(s) 642
BseGI GGATG 5 cut(s) 22, 418, 436, 536, 777
BseJI GATNNNNATC 1 cut(s) 122
BseLI CCNNNNNNNGG 6 cut(s) 467, 681, 804, 826, 905, 1195
BseMII CTCAG 4 cut(s) 453, 912, 968, 1185
BseNI ACTGG 4 cut(s) 56, 358, 624, 638
BseRI GAGGAG 1 cut(s) 567
BseXI GCAGC 1 cut(s) 1064
BseYI CCCAGC 1 cut(s) 342
Bsh1236I CGCG 1 cut(s) 1082
BshFI GGCC 2 cut(s) 320, 733
BshVI ATCGAT 1 cut(s) 642
BsiHKAI GWGCWC 1 cut(s) 586
BsiSI CCGG 2 cut(s) 273, 675
BslFI GGGAC 2 cut(s) 614, 802
BslI CCNNNNNNNGG 6 cut(s) 467, 681, 804, 826, 905, 1195
BsmAI GTCTC 2 cut(s) 86, 957
BsmFI GGGAC 2 cut(s) 614, 802
BsmI GAATGC 1 cut(s) 149
BsnI GGCC 2 cut(s) 320, 733
Bso31I GGTCTC 1 cut(s) 957
Bsp119I TTCGAA 1 cut(s) 885
Bsp1286I GDGCHC 1 cut(s) 586
Bsp143I GATC 5 cut(s) 97, 109, 117, 709, 957
BspACI CCGC 4 cut(s) 517, 899, 1082, 1091
BspANI GGCC 2 cut(s) 320, 733
BspCNI CTCAG 4 cut(s) 454, 913, 967, 1184
BspDI ATCGAT 1 cut(s) 642
BspFNI CGCG 1 cut(s) 1082
BspHI TCATGA 2 cut(s) 159, 561
BspMI ACCTGC 1 cut(s) 1076
BspPI GGATC 1 cut(s) 717
BspT104I TTCGAA 1 cut(s) 885
BspTNI GGTCTC 1 cut(s) 957
BsrFI RCCGGY 1 cut(s) 674
BsrI ACTGG 4 cut(s) 56, 358, 624, 638
BssAI RCCGGY 1 cut(s) 674
BssMI GATC 5 cut(s) 97, 109, 117, 709, 957
Bst2UI CCWGG 2 cut(s) 707, 1069
Bst4CI ACNGT 4 cut(s) 415, 992, 1112, 1193
Bst6I CTCTTC 1 cut(s) 264
BstAPI GCANNNNNTGC 1 cut(s) 611
BstBI TTCGAA 1 cut(s) 885
BstC8I GCNNGC 3 cut(s) 519, 676, 942
BstDEI CTNAG 7 cut(s) 462, 513, 801, 921, 954, 1008, 1171
BstENI CCTNNNNNAGG 1 cut(s) 824
BstF5I GGATG 5 cut(s) 22, 418, 436, 536, 777
BstFNI CGCG 1 cut(s) 1082
BstH2I RGCGCY 2 cut(s) 451, 1097
BstHHI GCGC 4 cut(s) 379, 450, 1082, 1096
BstKTI GATC 5 cut(s) 100, 112, 120, 712, 960
BstMAI GTCTC 2 cut(s) 86, 957
BstMBI GATC 5 cut(s) 97, 109, 117, 709, 957
BstMWI GCNNNNNNNGC 7 cut(s) 317, 611, 917, 1088, 1091, 1133, 1223
BstNI CCWGG 2 cut(s) 707, 1069
BstNSI RCATGY 3 cut(s) 436, 662, 1045
BstSCI CCNGG 2 cut(s) 705, 1067
BstUI CGCG 1 cut(s) 1082
BstV1I GCAGC 1 cut(s) 1064
BstX2I RGATCY 1 cut(s) 709
BstYI RGATCY 1 cut(s) 709
Bsu15I ATCGAT 1 cut(s) 642
BsuRI GGCC 2 cut(s) 320, 733
BsuTUI ATCGAT 1 cut(s) 642
BtrI CACGTC 1 cut(s) 278
BtsCI GGATG 5 cut(s) 22, 418, 436, 536, 777
BtsI GCAGTG 2 cut(s) 935, 1236
BtsIMutI CAGTG 5 cut(s) 63, 411, 935, 1117, 1236
BveI ACCTGC 1 cut(s) 1076
Cac8I GCNNGC 3 cut(s) 519, 676, 942
CciI TCATGA 2 cut(s) 159, 561
CfoI GCGC 4 cut(s) 379, 450, 1082, 1096
Cfr10I RCCGGY 1 cut(s) 674
Cfr13I GGNCC 1 cut(s) 731
ClaI ATCGAT 1 cut(s) 642
CseI GACGC 2 cut(s) 611, 926
Csp6I GTAC 2 cut(s) 46, 1186
CviAII CATG 8 cut(s) 49, 160, 238, 433, 467, 562, 659, 1042
CviQI GTAC 2 cut(s) 46, 1186
DdeI CTNAG 7 cut(s) 462, 513, 801, 921, 954, 1008, 1171
DpnI GATC 5 cut(s) 99, 111, 119, 711, 959
DpnII GATC 5 cut(s) 97, 109, 117, 709, 957
Eam1104I CTCTTC 1 cut(s) 264
EarI CTCTTC 1 cut(s) 264
EciI GGCGGA 1 cut(s) 888
Eco147I AGGCCT 1 cut(s) 320
Eco31I GGTCTC 1 cut(s) 957
Eco47III AGCGCT 1 cut(s) 449
Eco57I CTGAAG 2 cut(s) 636, 1086
EcoNI CCTNNNNNAGG 1 cut(s) 824
EcoRII CCWGG 2 cut(s) 705, 1067
EcoT22I ATGCAT 1 cut(s) 438
FaeI CATG 8 cut(s) 52, 163, 241, 436, 470, 565, 662, 1045
FaqI GGGAC 2 cut(s) 614, 802
FatI CATG 8 cut(s) 48, 159, 237, 432, 466, 561, 658, 1041
FauI CCCGC 1 cut(s) 510
FbaI TGATCA 1 cut(s) 109
Fnu4HI GCNGC 3 cut(s) 1078, 1083, 1092
FokI GGATG 5 cut(s) 29, 405, 423, 543, 764
Fsp4HI GCNGC 3 cut(s) 1078, 1083, 1092
FspBI CTAG 2 cut(s) 182, 759
FspI TGCGCA 1 cut(s) 378
GlaI GCGC 4 cut(s) 378, 449, 1081, 1095
GluI GCNGC 3 cut(s) 1078, 1083, 1092
GsaI CCCAGC 1 cut(s) 346
HaeII RGCGCY 2 cut(s) 451, 1097
HaeIII GGCC 2 cut(s) 320, 733
HapII CCGG 2 cut(s) 273, 675
HgaI GACGC 2 cut(s) 611, 926
HhaI GCGC 4 cut(s) 379, 450, 1082, 1096
Hin1II CATG 8 cut(s) 52, 163, 241, 436, 470, 565, 662, 1045
Hin6I GCGC 4 cut(s) 377, 448, 1080, 1094
HinP1I GCGC 4 cut(s) 377, 448, 1080, 1094
HincII GTYRAC 1 cut(s) 333
HindII GTYRAC 1 cut(s) 333
HindIII AAGCTT 2 cut(s) 34, 618
HinfI GANTC 4 cut(s) 424, 502, 695, 1169
HpaI GTTAAC 1 cut(s) 333
HpaII CCGG 2 cut(s) 273, 675
HphI GGTGA 5 cut(s) 92, 146, 203, 487, 582
Hpy166II GTNNAC 1 cut(s) 333
Hpy188III TCNNGA 6 cut(s) 160, 182, 461, 499, 562, 682
Hpy8I GTNNAC 1 cut(s) 333
HpyAV CCTTC 2 cut(s) 331, 1110
HpyCH4III ACNGT 4 cut(s) 415, 992, 1112, 1193
HpyCH4IV ACGT 1 cut(s) 277
HpyCH4V TGCA 4 cut(s) 147, 311, 436, 540
HpyF10VI GCNNNNNNNGC 7 cut(s) 317, 611, 917, 1088, 1091, 1133, 1223
HpyF3I CTNAG 7 cut(s) 462, 513, 801, 921, 954, 1008, 1171
HpySE526I ACGT 1 cut(s) 277
Hsp92II CATG 8 cut(s) 52, 163, 241, 436, 470, 565, 662, 1045
HspAI GCGC 4 cut(s) 377, 448, 1080, 1094
KroI GCCGGC 1 cut(s) 674
KroNI GCCGGC 1 cut(s) 676
Ksp22I TGATCA 1 cut(s) 109
KspAI GTTAAC 1 cut(s) 333
Kzo9I GATC 5 cut(s) 97, 109, 117, 709, 957
Lsp1109I GCAGC 1 cut(s) 1064
LweI GCATC 4 cut(s) 233, 445, 687, 1054
MaeI CTAG 2 cut(s) 182, 759
MaeII ACGT 1 cut(s) 277
MaeIII GTNAC 1 cut(s) 74
MalI GATC 5 cut(s) 99, 111, 119, 711, 959
MboI GATC 5 cut(s) 97, 109, 117, 709, 957
MboII GAAGA 4 cut(s) 112, 218, 251, 899
MflI RGATCY 1 cut(s) 709
MhlI GDGCHC 1 cut(s) 586
MluCI AATT 6 cut(s) 138, 155, 810, 863, 979, 1154
MlyI GAGTC 3 cut(s) 418, 704, 1163
MmeI TCCRAC 5 cut(s) 363, 387, 446, 851, 1166
MnlI CCTC 9 cut(s) 189, 267, 545, 734, 779, 820, 830, 916, 940
Mph1103I ATGCAT 1 cut(s) 438
MroNI GCCGGC 1 cut(s) 674
MroXI GAANNNNTTC 1 cut(s) 789
MseI TTAA 6 cut(s) 87, 230, 332, 369, 663, 1037
MspA1I CMGCKG 1 cut(s) 1077
MspI CCGG 2 cut(s) 273, 675
MspR9I CCNGG 2 cut(s) 707, 1069
Mva1269I GAATGC 1 cut(s) 149
MvaI CCWGG 2 cut(s) 707, 1069
MvnI CGCG 1 cut(s) 1082
MwoI GCNNNNNNNGC 7 cut(s) 317, 611, 917, 1088, 1091, 1133, 1223
NaeI GCCGGC 1 cut(s) 676
NdeII GATC 5 cut(s) 97, 109, 117, 709, 957
NgoMIV GCCGGC 1 cut(s) 674
NlaIII CATG 8 cut(s) 52, 163, 241, 436, 470, 565, 662, 1045
NmuCI GTSAC 1 cut(s) 74
NsbI TGCGCA 1 cut(s) 378
NsiI ATGCAT 1 cut(s) 438
NspI RCATGY 3 cut(s) 436, 662, 1045
NspV TTCGAA 1 cut(s) 885
PagI TCATGA 2 cut(s) 159, 561
PaqCI CACCTGC 1 cut(s) 1076
PceI AGGCCT 1 cut(s) 320
PciI ACATGT 2 cut(s) 658, 1041
PctI GAATGC 1 cut(s) 149
PdiI GCCGGC 1 cut(s) 676
PdmI GAANNNNTTC 1 cut(s) 789
PfeI GAWTC 1 cut(s) 502
PkrI GCNGC 3 cut(s) 1079, 1084, 1093
PleI GAGTC 3 cut(s) 418, 703, 1163
PpsI GAGTC 3 cut(s) 418, 703, 1163
PscI ACATGT 2 cut(s) 658, 1041
PshBI ATTAAT 1 cut(s) 369
Psp6I CCWGG 2 cut(s) 705, 1067
PspFI CCCAGC 1 cut(s) 342
PspGI CCWGG 2 cut(s) 705, 1067
PspPI GGNCC 1 cut(s) 731
PsuI RGATCY 1 cut(s) 709
PvuII CAGCTG 1 cut(s) 1077
RsaI GTAC 2 cut(s) 47, 1187
RsaNI GTAC 2 cut(s) 46, 1186
SaqAI TTAA 6 cut(s) 87, 230, 332, 369, 663, 1037
SatI GCNGC 3 cut(s) 1078, 1083, 1092
Sau3AI GATC 5 cut(s) 97, 109, 117, 709, 957
Sau96I GGNCC 1 cut(s) 731
SchI GAGTC 3 cut(s) 418, 704, 1163
ScrFI CCNGG 2 cut(s) 707, 1069
SduI GDGCHC 1 cut(s) 586
SfaNI GCATC 4 cut(s) 233, 445, 687, 1054
SfuI TTCGAA 1 cut(s) 885
SmlI CTYRAG 3 cut(s) 314, 821, 1181
SmoI CTYRAG 3 cut(s) 314, 821, 1181
SpeI ACTAGT 1 cut(s) 758
Sse9I AATT 6 cut(s) 138, 155, 810, 863, 979, 1154
SseBI AGGCCT 1 cut(s) 320
SsiI CCGC 4 cut(s) 517, 899, 1082, 1091
SspI AATATT 1 cut(s) 790
SspMI CTAG 2 cut(s) 182, 759
StuI AGGCCT 1 cut(s) 320
StyD4I CCNGG 2 cut(s) 705, 1067
TaaI ACNGT 4 cut(s) 415, 992, 1112, 1193
TaiI ACGT 1 cut(s) 280
TaqI TCGA 8 cut(s) 213, 324, 642, 693, 717, 885, 960, 1147
TasI AATT 6 cut(s) 138, 155, 810, 863, 979, 1154
TatI WGTACW 1 cut(s) 45
TauI GCSGC 2 cut(s) 1085, 1094
TfiI GAWTC 1 cut(s) 502
Tru1I TTAA 6 cut(s) 87, 230, 332, 369, 663, 1037
Tru9I TTAA 6 cut(s) 87, 230, 332, 369, 663, 1037
TscAI CASTG 5 cut(s) 63, 418, 942, 1117, 1243
TseFI GTSAC 1 cut(s) 74
TseI GCWGC 1 cut(s) 1077
Tsp45I GTSAC 1 cut(s) 74
TspDTI ATGAA 9 cut(s) 33, 65, 112, 148, 254, 407, 550, 990, 1238
TspGWI ACGGA 1 cut(s) 1191
TspRI CASTG 5 cut(s) 63, 418, 942, 1117, 1243
VspI ATTAAT 1 cut(s) 369
XagI CCTNNNNNAGG 1 cut(s) 824
XapI RAATTY 3 cut(s) 155, 979, 1154
XbaI TCTAGA 1 cut(s) 181
XceI RCATGY 3 cut(s) 436, 662, 1045
XmnI GAANNNNTTC 1 cut(s) 789
XspI CTAG 2 cut(s) 182, 759
Zsp2I ATGCAT 1 cut(s) 438
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.