Rmu_sc0011922.1_g000007

N-acetylglucosaminyltransferase II (MGAT2)

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011922.1
Physical Location & Seq
Forward (+)
24163 .. 24660
498 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011922.1_g000007.1.cds

Sequence Viewer

Length: 498 bp
atgcttgagagtgtcgatgaaagggatatctttgaagtcagcaaacactcacactggggtttttatccgtatgtctaccccgagaatatgtacattgttcgagcgggtgaacggtgtcgttgggtcatcttcatcatagaaggcgtaattgaattgaccgacacaacgtctaacggtgctgaaacaacgggttcatcatcagtgattaagaccgagcgtcttgagaaaggtcagtactatggacaagaattgttgaatcatttttcatcattgatcaatcagcagcgccggagtgtggtagggcttcctatttggacccgagatgtcaaatgtcgtaccaaagtcgaagcactccgtatcgaggccggcgacttatatggtttactaagacatgtcaaccgggactacatctggaggcaggataagtgggtgaagcggacacttgccgttgacaacactgatgagacattaaacaaggtttacatgcacgcggcttaa

Protein Analysis

165

Amino Acids

19.33

Weight (kDa)

6.52

Isoelectric Point (pI)

43.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000491)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g12100 FvH4_3g12110 FvH4_3g12111 FvH4_3g12120 FvH4_3g12120 FvH4_3g28952 FvH4_6g40660 FvH4_6g40661 FvH4_6g40960
rosa_chinensis RchiOBHm_Chr1g0340941 RchiOBHm_Chr2g0156041 RchiOBHm_Chr2g0156591 RchiOBHm_Chr5g0019791 RchiOBHm_Chr5g0019821
rosa_laevigata RLG00000007998 RLG00000020883 RLG00000020887 RLG00000020922 RLG00000029052 RLG00000032473 RLG00000032474 RLG00000032477 RLG00000032478
rosa_multiflora Rmu_co8231441.1_g000001 Rmu_co8352639.1_g000001 Rmu_co8510723.1_g000001 Rmu_sc0000344.1_g000022 Rmu_sc0000344.1_g000023 Rmu_sc0001145.1_g000015 Rmu_sc0001145.1_g000016 Rmu_sc0001211.1_g000087 Rmu_sc0001319.1_g000003 Rmu_sc0008321.1_g000001 Rmu_sc0011512.1_g000007 Rmu_sc0011922.1_g000003 Rmu_sc0011922.1_g000007 Rmu_ssc0000155.1_g000002 Rmu_ssc0000155.1_g000004
rosa_roxburghii Rroxscaffold_1G00058320 Rroxscaffold_1G00058340 Rroxscaffold_2G00092930 Rroxscaffold_2G00093240 Rroxscaffold_2G00093270 Rroxscaffold_4G00311560 Rroxscaffold_4G00311590 Rroxscaffold_5G00360130
rosa_rugosa Rorug01G0160700.1 Rorug02G0451400 Rorug02G0454400 Rorug02G0454400 Rorug02G0454500 Rorug02G0454600 Rorug05G0054100 Rorug05G0054200 Rorug05G0054300
rosa_samantha Rh1AG175400 Rh1BG143700 Rh1BG143800 Rh1CG163400 Rh1DG175300 Rh1DG175400 Rh1DG175500 Rh2AG518200 Rh2AG518300 Rh2BG529400 Rh2BG532700 Rh2BG533200 Rh2CG502900 Rh2CG503000 Rh2DG538500 Rh2DG538600 Rh2DG541600 Rh2DG542000 Rh4BG200000 Rh4BG200100 Rh5AG144500 Rh5AG144600 Rh5AG366400 Rh5BG143500 Rh5BG143700 Rh5CG155000 Rh5CG155300 Rh5DG143500 Rh7BG257300 Rh7BG257400 Rh7BG257500
rosa_wichuraiana Rw1G014680 Rw2G042670 Rw2G042900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 104
AccI GTMKAC 1 cut(s) 75
AccII CGCG 1 cut(s) 491
AciI CCGC 3 cut(s) 104, 436, 491
AfaI GTAC 3 cut(s) 92, 236, 337
AfiI CCNNNNNNNGG 2 cut(s) 295, 361
AflIII ACRYGT 1 cut(s) 391
AgsI TTSAA 3 cut(s) 35, 152, 256
AhdI GACNNNNNGTC 2 cut(s) 166, 216
Alw26I GTCTC 1 cut(s) 458
Ama87I CYCGRG 2 cut(s) 80, 318
AoxI GGCC 1 cut(s) 363
ApeKI GCWGC 1 cut(s) 283
AspLEI GCGC 1 cut(s) 288
AspS9I GGNCC 1 cut(s) 315
AsuC2I CCSGG 1 cut(s) 401
AsuHPI GGTGA 2 cut(s) 119, 442
AvaI CYCGRG 2 cut(s) 80, 318
AvaII GGWCC 1 cut(s) 315
BbvI GCAGC 1 cut(s) 295
BceAI ACGGC 1 cut(s) 431
BclI TGATCA 1 cut(s) 273
BcnI CCSGG 1 cut(s) 401
BcoDI GTCTC 1 cut(s) 458
BfoI RGCGCY 1 cut(s) 289
BisI GCNGC 2 cut(s) 284, 492
BlsI GCNGC 2 cut(s) 285, 493
BmcAI AGTACT 1 cut(s) 236
Bme1390I CCNGG 1 cut(s) 401
Bme18I GGWCC 1 cut(s) 315
BmeRI GACNNNNNGTC 2 cut(s) 166, 216
BmeT110I CYCGRG 2 cut(s) 80, 318
BmgT120I GGNCC 1 cut(s) 315
BmiI GGNNCC 1 cut(s) 317
BmrFI CCNGG 1 cut(s) 401
BmrI ACTGGG 1 cut(s) 64
BmuI ACTGGG 1 cut(s) 64
BpmI CTGGAG 1 cut(s) 433
BpuEI CTTGAG 2 cut(s) 26, 242
BpuMI CCSGG 1 cut(s) 401
Bsc4I CCNNNNNNNGG 2 cut(s) 295, 361
Bse118I RCCGGY 1 cut(s) 365
Bse1I ACTGG 1 cut(s) 59
BseLI CCNNNNNNNGG 2 cut(s) 295, 361
BseNI ACTGG 1 cut(s) 59
BseXI GCAGC 1 cut(s) 295
Bsh1236I CGCG 1 cut(s) 491
BshFI GGCC 1 cut(s) 365
BsiHKCI CYCGRG 2 cut(s) 80, 318
BsiSI CCGG 3 cut(s) 289, 366, 400
BslFI GGGAC 1 cut(s) 416
BslI CCNNNNNNNGG 2 cut(s) 295, 361
BsmAI GTCTC 1 cut(s) 458
BsmFI GGGAC 1 cut(s) 416
BsnI GGCC 1 cut(s) 365
BsoBI CYCGRG 2 cut(s) 80, 318
Bsp1407I TGTACA 1 cut(s) 90
Bsp143I GATC 1 cut(s) 273
BspACI CCGC 3 cut(s) 104, 436, 491
BspANI GGCC 1 cut(s) 365
BspFNI CGCG 1 cut(s) 491
BspLI GGNNCC 1 cut(s) 317
BsrBI CCGCTC 1 cut(s) 104
BsrFI RCCGGY 1 cut(s) 365
BsrGI TGTACA 1 cut(s) 90
BsrI ACTGG 1 cut(s) 59
BssAI RCCGGY 1 cut(s) 365
BssMI GATC 1 cut(s) 273
Bst4CI ACNGT 2 cut(s) 114, 176
BstAUI TGTACA 1 cut(s) 90
BstC8I GCNNGC 2 cut(s) 367, 489
BstDEI CTNAG 1 cut(s) 386
BstFNI CGCG 1 cut(s) 491
BstH2I RGCGCY 1 cut(s) 289
BstHHI GCGC 1 cut(s) 288
BstKTI GATC 1 cut(s) 276
BstMAI GTCTC 1 cut(s) 458
BstMBI GATC 1 cut(s) 273
BstNSI RCATGY 2 cut(s) 395, 487
BstSCI CCNGG 1 cut(s) 399
BstUI CGCG 1 cut(s) 491
BstV1I GCAGC 1 cut(s) 295
BsuRI GGCC 1 cut(s) 365
BtsIMutI CAGTG 3 cut(s) 52, 207, 456
Cac8I GCNNGC 2 cut(s) 367, 489
CfoI GCGC 1 cut(s) 288
Cfr10I RCCGGY 1 cut(s) 365
Cfr13I GGNCC 1 cut(s) 315
CseI GACGC 1 cut(s) 206
Csp6I GTAC 3 cut(s) 91, 235, 336
CviAII CATG 2 cut(s) 392, 484
CviJI RGCY 3 cut(s) 304, 365, 494
CviKI_1 RGCY 3 cut(s) 304, 365, 494
CviQI GTAC 3 cut(s) 91, 235, 336
DdeI CTNAG 1 cut(s) 386
DpnI GATC 1 cut(s) 275
DpnII GATC 1 cut(s) 273
DriI GACNNNNNGTC 2 cut(s) 166, 216
Eam1105I GACNNNNNGTC 2 cut(s) 166, 216
Eco32I GATATC 1 cut(s) 28
Eco47I GGWCC 1 cut(s) 315
Eco88I CYCGRG 2 cut(s) 80, 318
EcoRV GATATC 1 cut(s) 28
FaeI CATG 2 cut(s) 395, 487
FaiI YATR 8 cut(s) 72, 89, 137, 240, 376, 378, 393, 485
FaqI GGGAC 1 cut(s) 416
FatI CATG 2 cut(s) 391, 483
FauI CCCGC 1 cut(s) 97
FbaI TGATCA 1 cut(s) 273
FblI GTMKAC 1 cut(s) 75
Fnu4HI GCNGC 2 cut(s) 284, 492
Fsp4HI GCNGC 2 cut(s) 284, 492
GlaI GCGC 1 cut(s) 287
GluI GCNGC 2 cut(s) 284, 492
GsuI CTGGAG 1 cut(s) 433
HaeII RGCGCY 1 cut(s) 289
HaeIII GGCC 1 cut(s) 365
HapII CCGG 3 cut(s) 289, 366, 400
HgaI GACGC 1 cut(s) 206
HhaI GCGC 1 cut(s) 288
Hin1II CATG 2 cut(s) 395, 487
Hin6I GCGC 1 cut(s) 286
HinP1I GCGC 1 cut(s) 286
HincII GTYRAC 2 cut(s) 397, 451
HindII GTYRAC 2 cut(s) 397, 451
HinfI GANTC 1 cut(s) 256
HpaII CCGG 3 cut(s) 289, 366, 400
HphI GGTGA 2 cut(s) 119, 442
Hpy166II GTNNAC 6 cut(s) 76, 110, 383, 397, 451, 481
Hpy188III TCNNGA 2 cut(s) 221, 412
Hpy8I GTNNAC 6 cut(s) 76, 110, 383, 397, 451, 481
HpyAV CCTTC 1 cut(s) 134
HpyCH4III ACNGT 2 cut(s) 114, 176
HpyCH4IV ACGT 1 cut(s) 167
HpyCH4V TGCA 1 cut(s) 487
HpyF3I CTNAG 1 cut(s) 386
HpySE526I ACGT 1 cut(s) 167
Hsp92II CATG 2 cut(s) 395, 487
HspAI GCGC 1 cut(s) 286
KroI GCCGGC 1 cut(s) 365
KroNI GCCGGC 1 cut(s) 367
Ksp22I TGATCA 1 cut(s) 273
Kzo9I GATC 1 cut(s) 273
LpnPI CCDG 6 cut(s) 40, 302, 379, 397, 404, 413
Lsp1109I GCAGC 1 cut(s) 295
MaeII ACGT 1 cut(s) 167
MalI GATC 1 cut(s) 275
MbiI CCGCTC 1 cut(s) 104
MboI GATC 1 cut(s) 273
MboII GAAGA 1 cut(s) 121
MluCI AATT 3 cut(s) 147, 152, 248
MnlI CCTC 2 cut(s) 355, 408
MroNI GCCGGC 1 cut(s) 365
MseI TTAA 3 cut(s) 207, 470, 496
MspI CCGG 3 cut(s) 289, 366, 400
MspR9I CCNGG 1 cut(s) 401
MvnI CGCG 1 cut(s) 491
NaeI GCCGGC 1 cut(s) 367
NciI CCSGG 1 cut(s) 401
NdeII GATC 1 cut(s) 273
NgoMIV GCCGGC 1 cut(s) 365
NlaIII CATG 2 cut(s) 395, 487
NlaIV GGNNCC 1 cut(s) 317
NspI RCATGY 2 cut(s) 395, 487
PciI ACATGT 1 cut(s) 391
PcsI WCGNNNNNNNCGW 1 cut(s) 366
PdiI GCCGGC 1 cut(s) 367
PfeI GAWTC 1 cut(s) 256
PkrI GCNGC 2 cut(s) 285, 493
PscI ACATGT 1 cut(s) 391
PspN4I GGNNCC 1 cut(s) 317
PspPI GGNCC 1 cut(s) 315
RsaI GTAC 3 cut(s) 92, 236, 337
RsaNI GTAC 3 cut(s) 91, 235, 336
SaqAI TTAA 3 cut(s) 207, 470, 496
SatI GCNGC 2 cut(s) 284, 492
Sau3AI GATC 1 cut(s) 273
Sau96I GGNCC 1 cut(s) 315
ScaI AGTACT 1 cut(s) 236
ScrFI CCNGG 1 cut(s) 401
SetI ASST 3 cut(s) 170, 232, 480
SinI GGWCC 1 cut(s) 315
SmlI CTYRAG 2 cut(s) 5, 221
SmoI CTYRAG 2 cut(s) 5, 221
Sse9I AATT 3 cut(s) 147, 152, 248
SsiI CCGC 3 cut(s) 104, 436, 491
StyD4I CCNGG 1 cut(s) 399
TaaI ACNGT 2 cut(s) 114, 176
TaiI ACGT 1 cut(s) 170
TaqI TCGA 4 cut(s) 15, 100, 345, 360
TaqII GACCGA 2 cut(s) 173, 227
TasI AATT 3 cut(s) 147, 152, 248
TatI WGTACW 2 cut(s) 90, 234
TauI GCSGC 1 cut(s) 494
TfiI GAWTC 1 cut(s) 256
Tru1I TTAA 3 cut(s) 207, 470, 496
Tru9I TTAA 3 cut(s) 207, 470, 496
TscAI CASTG 3 cut(s) 59, 207, 463
TseI GCWGC 1 cut(s) 283
TspDTI ATGAA 4 cut(s) 33, 121, 183, 255
TspGWI ACGGA 2 cut(s) 57, 344
TspRI CASTG 3 cut(s) 59, 207, 463
VpaK11BI GGWCC 1 cut(s) 315
XceI RCATGY 2 cut(s) 395, 487
XmiI GTMKAC 1 cut(s) 75
ZrmI AGTACT 1 cut(s) 236
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.