RLG00000032474

Cyclic nucleotide-gated ion channel 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000491
Physical Location & Seq
Forward (+)
15615479 .. 15642954
27476 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032474

Sequence Viewer

Length: 2202 bp
ATGGTTACATGGGCGGTTGCGCAAGCAATTTTATCTTTAATTTGGGCGATACTAAAATGCCTCTGCGAGTGGGTTCCGTGGGTTCTAATTTGGATGGTTGCGGCTCCAATTGTGGTTCCAATGGTTGCAATTCTGTGGGCATGTAAATTAAATGTTGCAAGTCTGTTGGAATTAATTGATAATGCAATTCGGTCGGCATCTCAATCAATTACGTCTCCAATTGCGTCTGCAGTTCGGTGGGCATTGAAGGCTTTTCTTGACATCCCTTCAAAGTGGGAACAAGTATTTGTAATATCATGTATTGCGGTCTCACTGGATCCTCTGTTCTTTTACGTTCCAATCATCGACGAGACAAATAAATGTCTTTCAATGGACAAAAAGTTGAGAACTACAGCTCTTGTCTTGCGATCACTTACGGATGCCCCTTTAGTACTCCATATTAAATATCAAATTTGTGGTTGCGTCGACTCTGACTACCCCAACTGGTCCGACTCTGACTCCAACTCCGACTCTGACTCCGACGATTCTGAGGCAACAGCGTGTTCATTGAAGATCTTTAAAAAGTGGATAGCAAAGAGGATGCCGTGGTTGTCCTTCTCTATTATAGTTGACTGCCTTGCCATTCTTCCCATACCACAGGTGGCTATATTAGTTGGCTTTTACAAAATGGGAGGCTCATCGCGCTTTGAAGTTTCTATTAAAAGAACAACGCTCAACGCTTCTCTTGCTCTCCAGTATCTGCCAAGGATTTGTCAAATCTACCTATCTAGTAAGAAGTTTAGAACAAGCGGAAGATGGATCAAACCTTCACTGAATTTGTTTCTTTACATCCTTAGTAGCCACGTATTTGCTGCTTTTTGGTACTTTTTTGCTATTGAACGAGAGATATCATGCTGGCATCAAACCTGCAAAAACACTCCAAGATGTGTAGCTAGTTTTGATTGTAGTAGCTCTGCCAATACGTCAAGAAATATAACAGTCTTAAATCAATTATGCCCTATAAAATCACCGAATACTACAGTGTTCGATTTTGGAATCTATCTTTCAATCCTCCAGTCTGGTAACACGGGGAATGTTGGTTTCCTAACAAAGCTCGTTTACTCGTTATGGTGGGGCTTAAAAAATCTAAGCAATTTTGGCACAAACCTCGAAACCAGTAGCTACATGTGGGAGAACTGTTTTGCAATTATCATTTGTGTTAGCGGATTGCTACTATTTCTCTATTTGATTGGAAATATGCAGAAATATATGGAGTTGGAAACCACAAAATCTTTGAAGATCGAGGAATCAAGACGCCAAAAGATTCAAGCAAAGAAAGGAGAAATAAAAACGTGGATGTCAAATAATGGAATCTCAGGAAGTATGGAAAACAGAATCAAGAAGTACATCAAACAATACAATGTCGTGGAAAAGAACATGAAAGCAGATGTGGATGTGACATTTTTTCTCGACGGCAATCGTTTTGGCAATTCTACTACCAGTATCAGAGAGCTTTTTTCTTGGTCTGATACTATCAGAGAGCATCTCGTACAAAATGCGGTAGAAAAGATTTCGTCTATGCCGCCCTCTTCACCGGCTACTCCATCTACTTCAACTGCAGACCCACCGGATGGTCCATGGAATCCTCCTGCGCCTGGCTGGGTGAAACTCAATTGCAGTCATGTCTGGGATGATAGTAATAAAAAGGCATGTATGGGTTTTGTTTTGAGGAATGATAAAGAAGAGATCATTGCTGCAGGAGGTGTTGGCTCATATCAGAGTATTGATAGCTTTCAAGCTGGAGCTTTAAGTATATCCTACTGTTTGAAGAAATCTCTGCAACATGTGAAAACAAGTCATCGGATAGTTGTGGAGTCTGATGACAAGCTTTTCATCGATCTGCTCATCGATCTCCTAAAAAAATTGCCTTTACACAACGACCCACAAGTTCGAGGCATCCTTCGACCCACCCTTCAAAACATTGCCAATGTGGTTTCAAAGTTTAATGGTCACAAATTTGTGTCTTGTAGCCGCCAAGCTAATGAAGCGGCACTTCTTGAAGCAGAACATGCTCGTGATGAACATGCTCCTGCTCCTGGTTCTGAAGATTGGAAAAACGCTAAAGAAATAAAAGGACTATCTACTGCCTTGAAGGTCAACGACAGTCGCGCGACTACTTCAGCTGCTGCTGCTCTAGAGGAAATACGAACAAGTAAGGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

734

Amino Acids

81.97

Weight (kDa)

8.69

Isoelectric Point (pI)

44.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000491)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g12100 FvH4_3g12110 FvH4_3g12111 FvH4_3g12120 FvH4_3g12120 FvH4_3g28952 FvH4_6g40660 FvH4_6g40661 FvH4_6g40960
rosa_chinensis RchiOBHm_Chr1g0340941 RchiOBHm_Chr2g0156041 RchiOBHm_Chr2g0156591 RchiOBHm_Chr5g0019791 RchiOBHm_Chr5g0019821
rosa_laevigata RLG00000007998 RLG00000020883 RLG00000020887 RLG00000020922 RLG00000029052 RLG00000032473 RLG00000032474 RLG00000032477 RLG00000032478
rosa_multiflora Rmu_co8231441.1_g000001 Rmu_co8352639.1_g000001 Rmu_co8510723.1_g000001 Rmu_sc0000344.1_g000022 Rmu_sc0000344.1_g000023 Rmu_sc0001145.1_g000015 Rmu_sc0001145.1_g000016 Rmu_sc0001211.1_g000087 Rmu_sc0001319.1_g000003 Rmu_sc0008321.1_g000001 Rmu_sc0011512.1_g000007 Rmu_sc0011922.1_g000003 Rmu_sc0011922.1_g000007 Rmu_ssc0000155.1_g000002 Rmu_ssc0000155.1_g000004
rosa_roxburghii Rroxscaffold_1G00058320 Rroxscaffold_1G00058340 Rroxscaffold_2G00092930 Rroxscaffold_2G00093240 Rroxscaffold_2G00093270 Rroxscaffold_4G00311560 Rroxscaffold_4G00311590 Rroxscaffold_5G00360130
rosa_rugosa Rorug01G0160700.1 Rorug02G0451400 Rorug02G0454400 Rorug02G0454400 Rorug02G0454500 Rorug02G0454600 Rorug05G0054100 Rorug05G0054200 Rorug05G0054300
rosa_samantha Rh1AG175400 Rh1BG143700 Rh1BG143800 Rh1CG163400 Rh1DG175300 Rh1DG175400 Rh1DG175500 Rh2AG518200 Rh2AG518300 Rh2BG529400 Rh2BG532700 Rh2BG533200 Rh2CG502900 Rh2CG503000 Rh2DG538500 Rh2DG538600 Rh2DG541600 Rh2DG542000 Rh4BG200000 Rh4BG200100 Rh5AG144500 Rh5AG144600 Rh5AG366400 Rh5BG143500 Rh5BG143700 Rh5CG155000 Rh5CG155300 Rh5DG143500 Rh7BG257300 Rh7BG257400 Rh7BG257500
rosa_wichuraiana Rw1G014680 Rw2G042670 Rw2G042900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 21
Acc36I ACCTGC 1 cut(s) 914
AccB7I CCANNNNNTGG 1 cut(s) 1610
AccI GTMKAC 1 cut(s) 465
AccII CGCG 3 cut(s) 682, 2148, 2150
AciI CCGC 9 cut(s) 14, 101, 305, 789, 1203, 1538, 1562, 2011, 2027
AclWI GGATC 3 cut(s) 311, 324, 806
AcsI RAATTY 3 cut(s) 450, 814, 1994
AcuI CTGAAG 2 cut(s) 2103, 2142
AcyI GRCGYC 1 cut(s) 1294
AfaI GTAC 4 cut(s) 432, 863, 1385, 1530
AfiI CCNNNNNNNGG 3 cut(s) 1610, 1634, 2075
AflIII ACRYGT 2 cut(s) 1164, 1822
AjnI CCWGG 2 cut(s) 1633, 2074
AloI GAACNNNNNNTCC 2 cut(s) 308, 340
Alw26I GTCTC 3 cut(s) 219, 313, 344
AlwI GGATC 3 cut(s) 311, 324, 806
AlwNI CAGNNNCTG 2 cut(s) 739, 2165
ApeKI GCWGC 5 cut(s) 851, 1733, 2162, 2165, 2168
ApoI RAATTY 3 cut(s) 450, 814, 1994
AseI ATTAAT 1 cut(s) 173
AspLEI GCGC 4 cut(s) 22, 684, 1633, 2150
AspS9I GGNCC 2 cut(s) 486, 1613
AsuHPI GGTGA 3 cut(s) 999, 1563, 1654
AvaII GGWCC 2 cut(s) 486, 1613
BamHI GGATCC 1 cut(s) 316
BauI CACGAG 1 cut(s) 2052
BbvI GCAGC 5 cut(s) 838, 1720, 2149, 2152, 2155
BccI CCATC 4 cut(s) 88, 789, 1591, 1604
BceAI ACGGC 2 cut(s) 568, 1468
BcgI CGANNNNNNTGC 4 cut(s) 174, 208, 1129, 1163
BciT130I CCWGG 2 cut(s) 1635, 2076
BcoDI GTCTC 3 cut(s) 219, 313, 344
BfaI CTAG 3 cut(s) 768, 933, 2174
BfmI CTRYAG 5 cut(s) 228, 390, 1017, 1596, 1734
BfuAI ACCTGC 1 cut(s) 914
BglII AGATCT 1 cut(s) 552
BisI GCNGC 9 cut(s) 102, 852, 1562, 1734, 2011, 2028, 2163, 2166, 2169
BlsI GCNGC 9 cut(s) 103, 853, 1563, 1735, 2012, 2029, 2164, 2167, 2170
BmcAI AGTACT 1 cut(s) 432
Bme1390I CCNGG 2 cut(s) 1635, 2076
Bme18I GGWCC 2 cut(s) 486, 1613
BmgT120I GGNCC 2 cut(s) 486, 1613
BmiI GGNNCC 4 cut(s) 75, 105, 117, 318
BmrFI CCNGG 2 cut(s) 1635, 2076
BmsI GCATC 6 cut(s) 206, 409, 570, 907, 1531, 1944
BplI GAGNNNNNCTC 2 cut(s) 1509, 1541
BpmI CTGGAG 3 cut(s) 716, 1037, 1800
Bsa29I ATCGAT 2 cut(s) 1875, 1887
BsaAI YACGTR 1 cut(s) 844
BsaHI GRCGYC 1 cut(s) 1294
BsaI GGTCTC 1 cut(s) 313
BsaJI CCNNGG 4 cut(s) 77, 584, 743, 1616
BsaWI WCCGGW 1 cut(s) 1606
BsaXI ACNNNNNCTCC 6 cut(s) 482, 488, 500, 512, 518, 530
Bsc4I CCNNNNNNNGG 3 cut(s) 1610, 1634, 2075
Bse118I RCCGGY 1 cut(s) 1573
Bse1I ACTGG 6 cut(s) 318, 488, 733, 1054, 1155, 1479
Bse3DI GCAATG 2 cut(s) 1728, 1959
BseBI CCWGG 2 cut(s) 1635, 2076
BseCI ATCGAT 2 cut(s) 1875, 1887
BseDI CCNNGG 4 cut(s) 77, 584, 743, 1616
BseLI CCNNNNNNNGG 3 cut(s) 1610, 1634, 2075
BseMI GCAATG 2 cut(s) 1728, 1959
BseMII CTCAG 2 cut(s) 519, 1368
BseNI ACTGG 6 cut(s) 318, 488, 733, 1054, 1155, 1479
BseXI GCAGC 5 cut(s) 838, 1720, 2149, 2152, 2155
BseYI CCCAGC 1 cut(s) 1638
Bsh1236I CGCG 3 cut(s) 682, 2148, 2150
Bsh1285I CGRYCG 1 cut(s) 194
BshVI ATCGAT 2 cut(s) 1875, 1887
BsiEI CGRYCG 1 cut(s) 194
BsiSI CCGG 2 cut(s) 1574, 1607
BslI CCNNNNNNNGG 3 cut(s) 1610, 1634, 2075
BsmAI GTCTC 3 cut(s) 219, 313, 344
BsmBI CGTCTC 1 cut(s) 219
Bso31I GGTCTC 1 cut(s) 313
Bsp143I GATC 8 cut(s) 316, 407, 552, 798, 1278, 1725, 1876, 1888
Bsp19I CCATGG 1 cut(s) 1616
BspACI CCGC 9 cut(s) 14, 101, 305, 789, 1203, 1538, 1562, 2011, 2027
BspCNI CTCAG 2 cut(s) 520, 1367
BspDI ATCGAT 2 cut(s) 1875, 1887
BspFNI CGCG 3 cut(s) 682, 2148, 2150
BspLI GGNNCC 4 cut(s) 75, 105, 117, 318
BspMAI CTGCAG 3 cut(s) 232, 1600, 1738
BspMI ACCTGC 1 cut(s) 914
BspPI GGATC 3 cut(s) 311, 324, 806
BspTNI GGTCTC 1 cut(s) 313
BsrDI GCAATG 2 cut(s) 1728, 1959
BsrFI RCCGGY 1 cut(s) 1573
BsrI ACTGG 6 cut(s) 318, 488, 733, 1054, 1155, 1479
BssAI RCCGGY 1 cut(s) 1573
BssECI CCNNGG 4 cut(s) 77, 584, 743, 1616
BssMI GATC 8 cut(s) 316, 407, 552, 798, 1278, 1725, 1876, 1888
BssNI GRCGYC 1 cut(s) 1294
BssSI CACGAG 1 cut(s) 2052
BssT1I CCWWGG 2 cut(s) 743, 1616
Bst2BI CACGAG 1 cut(s) 2052
Bst2UI CCWGG 2 cut(s) 1635, 2076
Bst4CI ACNGT 5 cut(s) 979, 1021, 1178, 1802, 2144
Bst6I CTCTTC 2 cut(s) 1573, 1716
BstACI GRCGYC 1 cut(s) 1294
BstAPI GCANNNNNTGC 1 cut(s) 2048
BstBAI YACGTR 1 cut(s) 844
BstC8I GCNNGC 2 cut(s) 24, 896
BstDEI CTNAG 4 cut(s) 528, 833, 1127, 1354
BstDSI CCRYGG 3 cut(s) 77, 584, 1616
BstFNI CGCG 3 cut(s) 682, 2148, 2150
BstHHI GCGC 4 cut(s) 22, 684, 1633, 2150
BstKTI GATC 8 cut(s) 319, 410, 555, 801, 1281, 1728, 1879, 1891
BstMAI GTCTC 3 cut(s) 219, 313, 344
BstMBI GATC 8 cut(s) 316, 407, 552, 798, 1278, 1725, 1876, 1888
BstMCI CGRYCG 1 cut(s) 194
BstMWI GCNNNNNNNGC 7 cut(s) 248, 681, 725, 1137, 2024, 2048, 2168
BstNI CCWGG 2 cut(s) 1635, 2076
BstNSI RCATGY 6 cut(s) 144, 1168, 1692, 1826, 2051, 2066
BstSCI CCNGG 2 cut(s) 1633, 2074
BstSFI CTRYAG 5 cut(s) 228, 390, 1017, 1596, 1734
BstUI CGCG 3 cut(s) 682, 2148, 2150
BstV1I GCAGC 5 cut(s) 838, 1720, 2149, 2152, 2155
BstX2I RGATCY 2 cut(s) 316, 552
BstYI RGATCY 2 cut(s) 316, 552
Bsu15I ATCGAT 2 cut(s) 1875, 1887
BsuTUI ATCGAT 2 cut(s) 1875, 1887
BtgI CCRYGG 3 cut(s) 77, 584, 1616
BtgZI GCGATG 1 cut(s) 663
BtsIMutI CAGTG 3 cut(s) 311, 809, 1026
BveI ACCTGC 1 cut(s) 914
Cac8I GCNNGC 2 cut(s) 24, 896
CaiI CAGNNNCTG 2 cut(s) 739, 2165
CfoI GCGC 4 cut(s) 22, 684, 1633, 2150
Cfr10I RCCGGY 1 cut(s) 1573
Cfr13I GGNCC 2 cut(s) 486, 1613
ClaI ATCGAT 2 cut(s) 1875, 1887
CseI GACGC 3 cut(s) 213, 451, 1302
Csp6I GTAC 4 cut(s) 431, 862, 1384, 1529
CviQI GTAC 4 cut(s) 431, 862, 1384, 1529
DdeI CTNAG 4 cut(s) 528, 833, 1127, 1354
DpnI GATC 8 cut(s) 318, 409, 554, 800, 1280, 1727, 1878, 1890
DpnII GATC 8 cut(s) 316, 407, 552, 798, 1278, 1725, 1876, 1888
DraI TTTAAA 1 cut(s) 559
Eam1104I CTCTTC 2 cut(s) 1573, 1716
EarI CTCTTC 2 cut(s) 1573, 1716
Eco130I CCWWGG 2 cut(s) 743, 1616
Eco31I GGTCTC 1 cut(s) 313
Eco32I GATATC 1 cut(s) 888
Eco47I GGWCC 2 cut(s) 486, 1613
Eco57I CTGAAG 2 cut(s) 2103, 2142
EcoRII CCWGG 2 cut(s) 1633, 2074
EcoRV GATATC 1 cut(s) 888
EcoT14I CCWWGG 2 cut(s) 743, 1616
ErhI CCWWGG 2 cut(s) 743, 1616
Esp3I CGTCTC 1 cut(s) 219
FalI AAGNNNNNCTT 2 cut(s) 2016, 2048
FblI GTMKAC 1 cut(s) 465
Fnu4HI GCNGC 9 cut(s) 102, 852, 1562, 1734, 2011, 2028, 2163, 2166, 2169
Fsp4HI GCNGC 9 cut(s) 102, 852, 1562, 1734, 2011, 2028, 2163, 2166, 2169
FspBI CTAG 3 cut(s) 768, 933, 2174
FspI TGCGCA 1 cut(s) 21
GlaI GCGC 4 cut(s) 21, 683, 1632, 2149
GluI GCNGC 9 cut(s) 102, 852, 1562, 1734, 2011, 2028, 2163, 2166, 2169
GsaI CCCAGC 1 cut(s) 1642
GsuI CTGGAG 3 cut(s) 716, 1037, 1800
HapII CCGG 2 cut(s) 1574, 1607
HgaI GACGC 3 cut(s) 213, 451, 1302
HhaI GCGC 4 cut(s) 22, 684, 1633, 2150
Hin1I GRCGYC 1 cut(s) 1294
Hin6I GCGC 4 cut(s) 20, 682, 1631, 2148
HinP1I GCGC 4 cut(s) 20, 682, 1631, 2148
HincII GTYRAC 3 cut(s) 466, 610, 2137
HindII GTYRAC 3 cut(s) 466, 610, 2137
HindIII AAGCTT 1 cut(s) 1865
HpaII CCGG 2 cut(s) 1574, 1607
HphI GGTGA 3 cut(s) 999, 1563, 1654
Hpy166II GTNNAC 4 cut(s) 466, 610, 1099, 2137
Hpy188III TCNNGA 9 cut(s) 257, 966, 1290, 1356, 1378, 1448, 2036, 2054, 2174
Hpy8I GTNNAC 4 cut(s) 466, 610, 1099, 2137
Hpy99I CGWCG 4 cut(s) 350, 467, 524, 1454
HpyAV CCTTC 7 cut(s) 241, 276, 604, 816, 1949, 1961, 2125
HpyCH4III ACNGT 5 cut(s) 979, 1021, 1178, 1802, 2144
HpyCH4IV ACGT 5 cut(s) 212, 333, 843, 962, 1331
HpyF10VI GCNNNNNNNGC 7 cut(s) 248, 681, 725, 1137, 2024, 2048, 2168
HpyF3I CTNAG 4 cut(s) 528, 833, 1127, 1354
HpySE526I ACGT 5 cut(s) 212, 333, 843, 962, 1331
Hsp92I GRCGYC 1 cut(s) 1294
HspAI GCGC 4 cut(s) 20, 682, 1631, 2148
Kzo9I GATC 8 cut(s) 316, 407, 552, 798, 1278, 1725, 1876, 1888
LmnI GCTCC 4 cut(s) 109, 1781, 2071, 2077
Lsp1109I GCAGC 5 cut(s) 838, 1720, 2149, 2152, 2155
LweI GCATC 6 cut(s) 206, 409, 570, 907, 1531, 1944
MaeI CTAG 3 cut(s) 768, 933, 2174
MaeII ACGT 5 cut(s) 212, 333, 843, 962, 1331
MaeIII GTNAC 4 cut(s) 4, 1061, 1435, 1988
MalI GATC 8 cut(s) 318, 409, 554, 800, 1280, 1727, 1878, 1890
MboI GATC 8 cut(s) 316, 407, 552, 798, 1278, 1725, 1876, 1888
MboII GAAGA 8 cut(s) 562, 617, 804, 1288, 1560, 1733, 1819, 2096
MfeI CAATTG 3 cut(s) 108, 219, 1651
MflI RGATCY 2 cut(s) 316, 552
MlyI GAGTC 6 cut(s) 461, 485, 491, 503, 509, 1862
MmeI TCCRAC 6 cut(s) 147, 513, 525, 531, 543, 1236
MslI CAYNNNNRTG 1 cut(s) 2052
MspA1I CMGCKG 1 cut(s) 2162
MspI CCGG 2 cut(s) 1574, 1607
MspR9I CCNGG 2 cut(s) 1635, 2076
MunI CAATTG 3 cut(s) 108, 219, 1651
MvaI CCWGG 2 cut(s) 1635, 2076
MvnI CGCG 3 cut(s) 682, 2148, 2150
MwoI GCNNNNNNNGC 7 cut(s) 248, 681, 725, 1137, 2024, 2048, 2168
NcoI CCATGG 1 cut(s) 1616
NdeII GATC 8 cut(s) 316, 407, 552, 798, 1278, 1725, 1876, 1888
NlaIV GGNNCC 4 cut(s) 75, 105, 117, 318
NmuCI GTSAC 2 cut(s) 1435, 1988
NsbI TGCGCA 1 cut(s) 21
NspI RCATGY 6 cut(s) 144, 1168, 1692, 1826, 2051, 2066
PciI ACATGT 2 cut(s) 1164, 1822
PfeI GAWTC 7 cut(s) 524, 1035, 1286, 1303, 1350, 1374, 1621
PflMI CCANNNNNTGG 1 cut(s) 1610
PkrI GCNGC 9 cut(s) 103, 853, 1563, 1735, 2012, 2029, 2164, 2167, 2170
PleI GAGTC 6 cut(s) 461, 485, 491, 503, 509, 1861
PpsI GAGTC 6 cut(s) 461, 485, 491, 503, 509, 1861
Ppu21I YACGTR 1 cut(s) 844
PscI ACATGT 2 cut(s) 1164, 1822
PshBI ATTAAT 1 cut(s) 173
Psp6I CCWGG 2 cut(s) 1633, 2074
PspFI CCCAGC 1 cut(s) 1638
PspGI CCWGG 2 cut(s) 1633, 2074
PspN4I GGNNCC 4 cut(s) 75, 105, 117, 318
PspPI GGNCC 2 cut(s) 486, 1613
PstI CTGCAG 3 cut(s) 232, 1600, 1738
PstNI CAGNNNCTG 2 cut(s) 739, 2165
PsuI RGATCY 2 cut(s) 316, 552
PvuII CAGCTG 1 cut(s) 2162
RsaI GTAC 4 cut(s) 432, 863, 1385, 1530
RsaNI GTAC 4 cut(s) 431, 862, 1384, 1529
RseI CAYNNNNRTG 1 cut(s) 2052
SalI GTCGAC 1 cut(s) 464
SatI GCNGC 9 cut(s) 102, 852, 1562, 1734, 2011, 2028, 2163, 2166, 2169
Sau3AI GATC 8 cut(s) 316, 407, 552, 798, 1278, 1725, 1876, 1888
Sau96I GGNCC 2 cut(s) 486, 1613
ScaI AGTACT 1 cut(s) 432
SchI GAGTC 6 cut(s) 461, 485, 491, 503, 509, 1862
ScrFI CCNGG 2 cut(s) 1635, 2076
SfaNI GCATC 6 cut(s) 206, 409, 570, 907, 1531, 1944
SfcI CTRYAG 5 cut(s) 228, 390, 1017, 1596, 1734
SinI GGWCC 2 cut(s) 486, 1613
SmiMI CAYNNNNRTG 1 cut(s) 2052
SsiI CCGC 9 cut(s) 14, 101, 305, 789, 1203, 1538, 1562, 2011, 2027
SspMI CTAG 3 cut(s) 768, 933, 2174
StyD4I CCNGG 2 cut(s) 1633, 2074
StyI CCWWGG 2 cut(s) 743, 1616
TaaI ACNGT 5 cut(s) 979, 1021, 1178, 1802, 2144
TaiI ACGT 5 cut(s) 215, 336, 846, 965, 1334
TaqII GACCGA 1 cut(s) 180
TatI WGTACW 2 cut(s) 430, 1383
TauI GCSGC 4 cut(s) 104, 1564, 2013, 2030
TfiI GAWTC 7 cut(s) 524, 1035, 1286, 1303, 1350, 1374, 1621
TscAI CASTG 3 cut(s) 318, 816, 1026
TseFI GTSAC 2 cut(s) 1435, 1988
TseI GCWGC 5 cut(s) 851, 1733, 2162, 2165, 2168
Tsp45I GTSAC 2 cut(s) 1435, 1988
TspDTI ATGAA 5 cut(s) 534, 1433, 1861, 2037, 2073
TspGWI ACGGA 2 cut(s) 66, 431
TspRI CASTG 3 cut(s) 318, 816, 1026
Van91I CCANNNNNTGG 1 cut(s) 1610
VpaK11BI GGWCC 2 cut(s) 486, 1613
VspI ATTAAT 1 cut(s) 173
XapI RAATTY 3 cut(s) 450, 814, 1994
XbaI TCTAGA 1 cut(s) 2173
XceI RCATGY 6 cut(s) 144, 1168, 1692, 1826, 2051, 2066
XcmI CCANNNNNNNNNTGG 1 cut(s) 637
XmiI GTMKAC 1 cut(s) 465
XspI CTAG 3 cut(s) 768, 933, 2174
ZrmI AGTACT 1 cut(s) 432
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.