Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001839.1

Orthogroup ID

OG0000689

Physical Location & Seq

Genomic Coordinates Forward (+)

109139 .. 111467

Gene Structure 2329 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001839.1_g000023.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1392 bp

atgggtgagaagctttgggtgaatgaggaagaaaaggtcatagtggagtcagtactaggcaccgaagcgcgccaggtgttgatttcattggcttcggagaacttgttgtccgacttggctaggcgtccgggacaattgggagtgcagcaggggctgtcccagcttgtccaagggtccagttgggattacgctgtcttctggcaggttgtgggattgaaatctggtggagctgccttgatttggggtgatggacattgcagagacaccaagggtggtggggttggagacgagagttctagtagagatagcaacttggagggagtgcagaagaagaatgtggaggtgagtgggtgcttgggaagctctactcgtgtttcggtggttcgggtgaggataactatgcgaggagagactgactcgtcatttccttcagaatcttttgacttacaagcaataggcacttcaaacggatgtcgaactgaggataatgaagttaaactgtttccgcacttgagccaaattatgtctgggaatttcagttctacagctggcgtttcaagttcagagcggcctaaagacaagtcattggcacaaattgatgaaaggaaacctagaaagagagggagaaagcctgccaatggaagagaagaaccattgaatcatgtggaagcagagcggcagagttgtgagaagcttaaccagcggttttacacccttagagctgttgttcctaacatatcgaagatggataaagcctctctcctttgtgatgccattacctacatcaacgatctccagatgaagatcagggtcatggaaactgagaagcagatgggaaacagcagccaaatgcagttcccggttccagtgattgatttccaggaatggcacgaggatgctgttgaacataacattgtagctcaagatactaatgtttctgtaacagacgatgacacagttattcatacattctccattcctactcaagccggcagtggcgaccacgccttcaacaccttcttcttcgacctcaagcccaccgtcaatcgccgaccaccttcaatcaccgatctggtgccgaccaccttcaatcaccgatctgaagctcccatccagttgcagtgccggaacctcaccaaaccgagaccggtcggagatgggctgcaggtgagagactggagaagaggacctggagaagacgaaggcggagatgggaccggtcggagatgggctgcaagtgaggtcctggagatgggttgcgtcggggctgggatcggtcggagatgggctgcaggtgagcgactggagaagacgaaggtgtccgctcggaatcgggctggaggagcatgggtgtccacaggggaagcgtgggtggccggagaaaaattctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0009892 GO:0010468 GO:0010556 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048519 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH bHLH-MYC_N

Protein Analysis

463

Amino Acids

50.89

Weight (kDa)

6.01

Isoelectric Point (pI)

45.99

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000689)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g08040
malus_domestica	MD09G1245800.v1.1 MD11G1098500.v1.1 MD16G1237300.v1.1
pyrus_communis	pycom03g07090 pycom03g07100 pycom09g08560 pycom13g20460 pycom16g19890
rosa_chinensis	RchiOBHm_Chr2g0118961 RchiOBHm_Chr2g0148671 RchiOBHm_Chr2g0150531 RchiOBHm_Chr2g0171301 RchiOBHm_Chr3g0455021 RchiOBHm_Chr6g0249451
rosa_laevigata	RLG00000001225 RLG00000001972 RLG00000008936 RLG00000009011 RLG00000009032 RLG00000015372 RLG00000019992 RLG00000020680 RLG00000026543
rosa_multiflora	Rmu_co8272705.1_g000001 Rmu_co8286409.1_g000001 Rmu_sc0000048.1_g000034 Rmu_sc0000824.1_g000002 Rmu_sc0001839.1_g000023 Rmu_sc0002070.1_g000050 Rmu_sc0002349.1_g000005 Rmu_sc0002453.1_g000019 Rmu_sc0006431.1_g000026 Rmu_sc0006758.1_g000001 Rmu_sc0006758.1_g000013 Rmu_sc0006997.1_g000015 Rmu_sc0008411.1_g000007 Rmu_sc0008411.1_g000019 Rmu_sc0008411.1_g000028 Rmu_sc0008678.1_g000001
rosa_roxburghii	Rroxscaffold_3G00225850 Rroxscaffold_3G00225860 Rroxscaffold_3G00233460 Rroxscaffold_3G00234260 Rroxscaffold_3G00236880 Rroxscaffold_3G00236890 Rroxscaffold_4G00294300 Rroxscaffold_4G00297380 Rroxscaffold_4G00324650 Rroxscaffold_5G00352840 Rroxscaffold_5G00354640 Rroxscaffold_5G00361500 Rroxscaffold_7G00156410 Rroxscaffold_7G00156420 Rroxscaffold_7G00198110 Rroxscaffold_7G00198120
rosa_samantha	Rh1CG014400 Rh1DG009900 Rh2AG465900 Rh2BG342900 Rh2CG452400 Rh2DG488000 Rh3DG303300 Rh4AG118000 Rh4DG159500 Rh5AG246100 Rh6AG232100 Rh6BG178700 Rh6DG174100 Rh7BG231200 Rh7DG380300
rosa_wichuraiana	Rw2G027640 Rw2G038070 Rw6G005920 Rw7G034430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1156, 1283
AasI	GACNNNNNNGTC	2 cut(s)	418, 1318
Acc36I	ACCTGC	3 cut(s)	193, 1156, 1283
AccB1I	GGYRCC	2 cut(s)	59, 1075
AccBSI	CCGCTC	3 cut(s)	568, 676, 1325
AccII	CGCG	1 cut(s)	70
AciI	CCGC	6 cut(s)	506, 568, 676, 703, 1206, 1323
AclWI	GGATC	1 cut(s)	1280
AcoI	YGGCCR	1 cut(s)	1374
AcsI	RAATTY	2 cut(s)	532, 1385
AcuI	CTGAAG	2 cut(s)	414, 1122
AcyI	GRCGYC	1 cut(s)	124
AfaI	GTAC	1 cut(s)	54
AfiI	CCNNNNNNNGG	3 cut(s)	240, 638, 1252
AgeI	ACCGGT	2 cut(s)	1147, 1217
AgsI	TTSAA	8 cut(s)	217, 465, 558, 658, 905, 1012, 1062, 1090
AjnI	CCWGG	4 cut(s)	72, 879, 1189, 1245
AloI	GAACNNNNNNTCC	4 cut(s)	92, 124, 523, 555
AluBI	AGCT	9 cut(s)	13, 163, 230, 363, 548, 694, 722, 920, 1106
AluI	AGCT	9 cut(s)	13, 163, 230, 363, 548, 694, 722, 920, 1106
Alw26I	GTCTC	5 cut(s)	255, 279, 404, 1138, 1167
AlwI	GGATC	1 cut(s)	1280
AlwNI	CAGNNNCTG	1 cut(s)	154
AoxI	GGCC	2 cut(s)	569, 1374
ApeKI	GCWGC	6 cut(s)	145, 230, 843, 1162, 1232, 1289
ApoI	RAATTY	2 cut(s)	532, 1385
AsiGI	ACCGGT	2 cut(s)	1147, 1217
AspLEI	GCGC	2 cut(s)	70, 72
AspS9I	GGNCC	4 cut(s)	174, 1187, 1215, 1243
AsuC2I	CCSGG	2 cut(s)	129, 860
AvaII	GGWCC	4 cut(s)	174, 1187, 1215, 1243
BaeI	ACNNNNGTAYC	2 cut(s)	918, 951
BanI	GGYRCC	2 cut(s)	59, 1075
BauI	CACGAG	2 cut(s)	369, 890
BbsI	GAAGAC	3 cut(s)	187, 1203, 1316
BbvI	GCAGC	6 cut(s)	157, 217, 855, 1149, 1219, 1276
BccI	CCATC	9 cut(s)	242, 739, 826, 1118, 1151, 1205, 1221, 1246, 1278
BciT130I	CCWGG	4 cut(s)	74, 881, 1191, 1247
BcnI	CCSGG	2 cut(s)	129, 860
BcoDI	GTCTC	5 cut(s)	255, 279, 404, 1138, 1167
BfaI	CTAG	4 cut(s)	56, 120, 297, 612
BfmI	CTRYAG	3 cut(s)	543, 1163, 1290
BfuAI	ACCTGC	3 cut(s)	193, 1156, 1283
BisI	GCNGC	8 cut(s)	146, 231, 569, 677, 844, 1163, 1233, 1290
BlsI	GCNGC	8 cut(s)	147, 232, 570, 678, 845, 1164, 1234, 1291
BmcAI	AGTACT	1 cut(s)	54
Bme1390I	CCNGG	6 cut(s)	74, 129, 860, 881, 1191, 1247
Bme18I	GGWCC	4 cut(s)	174, 1187, 1215, 1243
BmgT120I	GGNCC	4 cut(s)	174, 1187, 1215, 1243
BmiI	GGNNCC	6 cut(s)	61, 175, 864, 1077, 1130, 1216
BmrFI	CCNGG	6 cut(s)	74, 129, 860, 881, 1191, 1247
BmsI	GCATC	2 cut(s)	760, 886
BpiI	GAAGAC	3 cut(s)	187, 1203, 1316
BplI	GAGNNNNNCTC	2 cut(s)	401, 433
BpmI	CTGGAG	6 cut(s)	779, 1198, 1212, 1268, 1325, 1359
BpuEI	CTTGAG	4 cut(s)	532, 906, 969, 1016
BpuMI	CCSGG	2 cut(s)	129, 860
BsaBI	GATNNNNATC	2 cut(s)	217, 803
BsaHI	GRCGYC	1 cut(s)	124
BsaI	GGTCTC	1 cut(s)	1138
BsaJI	CCNNGG	2 cut(s)	169, 267
BsaWI	WCCGGW	2 cut(s)	1147, 1217
BsaXI	ACNNNNNCTCC	4 cut(s)	89, 119, 1335, 1365
Bsc4I	CCNNNNNNNGG	3 cut(s)	240, 638, 1252
Bse118I	RCCGGY	3 cut(s)	989, 1147, 1217
Bse1I	ACTGG	5 cut(s)	177, 866, 1114, 1181, 1308
Bse3DI	GCAATG	1 cut(s)	253
Bse8I	GATNNNNATC	2 cut(s)	217, 803
BseBI	CCWGG	4 cut(s)	74, 881, 1191, 1247
BseDI	CCNNGG	2 cut(s)	169, 267
BseGI	GGATG	3 cut(s)	476, 901, 1110
BseJI	GATNNNNATC	2 cut(s)	217, 803
BseLI	CCNNNNNNNGG	3 cut(s)	240, 638, 1252
BseMI	GCAATG	1 cut(s)	253
BseMII	CTCAG	2 cut(s)	471, 813
BseNI	ACTGG	5 cut(s)	177, 866, 1114, 1181, 1308
BsePI	GCGCGC	1 cut(s)	68
BseRI	GAGGAG	2 cut(s)	420, 1356
BseXI	GCAGC	6 cut(s)	157, 217, 855, 1149, 1219, 1276
BseYI	CCCAGC	2 cut(s)	159, 1268
BsgI	GTGCAG	2 cut(s)	164, 344
Bsh1236I	CGCG	1 cut(s)	70
Bsh1285I	CGRYCG	3 cut(s)	1152, 1222, 1279
BshFI	GGCC	2 cut(s)	571, 1376
BshNI	GGYRCC	2 cut(s)	59, 1075
BshTI	ACCGGT	2 cut(s)	1147, 1217
BsiEI	CGRYCG	3 cut(s)	1152, 1222, 1279
BsiSI	CCGG	7 cut(s)	128, 860, 990, 1126, 1148, 1218, 1377
BslFI	GGGAC	3 cut(s)	142, 144, 1228
BslI	CCNNNNNNNGG	3 cut(s)	240, 638, 1252
BsmAI	GTCTC	5 cut(s)	255, 279, 404, 1138, 1167
BsmBI	CGTCTC	1 cut(s)	279
BsmFI	GGGAC	3 cut(s)	142, 144, 1228
BsnI	GGCC	2 cut(s)	571, 1376
Bso31I	GGTCTC	1 cut(s)	1138
Bsp143I	GATC	5 cut(s)	790, 804, 1069, 1097, 1272
BspACI	CCGC	6 cut(s)	506, 568, 676, 703, 1206, 1323
BspANI	GGCC	2 cut(s)	571, 1376
BspCNI	CTCAG	2 cut(s)	472, 814
BspFNI	CGCG	1 cut(s)	70
BspLI	GGNNCC	6 cut(s)	61, 175, 864, 1077, 1130, 1216
BspMAI	CTGCAG	2 cut(s)	1167, 1294
BspMI	ACCTGC	3 cut(s)	193, 1156, 1283
BspPI	GGATC	1 cut(s)	1280
BspT107I	GGYRCC	2 cut(s)	59, 1075
BspTNI	GGTCTC	1 cut(s)	1138
BsrBI	CCGCTC	3 cut(s)	568, 676, 1325
BsrDI	GCAATG	1 cut(s)	253
BsrFI	RCCGGY	3 cut(s)	989, 1147, 1217
BsrI	ACTGG	5 cut(s)	177, 866, 1114, 1181, 1308
BssAI	RCCGGY	3 cut(s)	989, 1147, 1217
BssECI	CCNNGG	2 cut(s)	169, 267
BssHII	GCGCGC	1 cut(s)	68
BssMI	GATC	5 cut(s)	790, 804, 1069, 1097, 1272
BssNI	GRCGYC	1 cut(s)	124
BssSI	CACGAG	2 cut(s)	369, 890
BssT1I	CCWWGG	2 cut(s)	169, 267
Bst2BI	CACGAG	2 cut(s)	369, 890
Bst2UI	CCWGG	4 cut(s)	74, 881, 1191, 1247
Bst4CI	ACNGT	3 cut(s)	501, 958, 1042
Bst6I	CTCTTC	2 cut(s)	637, 1177
BstACI	GRCGYC	1 cut(s)	124
BstC8I	GCNNGC	4 cut(s)	70, 550, 633, 991
BstDEI	CTNAG	3 cut(s)	480, 716, 822
BstF5I	GGATG	3 cut(s)	476, 901, 1110
BstFNI	CGCG	1 cut(s)	70
BstHHI	GCGC	2 cut(s)	70, 72
BstKTI	GATC	5 cut(s)	793, 807, 1072, 1100, 1275
BstMAI	GTCTC	5 cut(s)	255, 279, 404, 1138, 1167
BstMBI	GATC	5 cut(s)	790, 804, 1069, 1097, 1272
BstMCI	CGRYCG	3 cut(s)	1152, 1222, 1279
BstMWI	GCNNNNNNNGC	6 cut(s)	151, 160, 360, 700, 1343, 1373
BstNI	CCWGG	4 cut(s)	74, 881, 1191, 1247
BstSCI	CCNGG	6 cut(s)	72, 127, 858, 879, 1189, 1245
BstSFI	CTRYAG	3 cut(s)	543, 1163, 1290
BstUI	CGCG	1 cut(s)	70
BstV1I	GCAGC	6 cut(s)	157, 217, 855, 1149, 1219, 1276
BstV2I	GAAGAC	3 cut(s)	187, 1203, 1316
BsuRI	GGCC	2 cut(s)	571, 1376
BtsCI	GGATG	3 cut(s)	476, 901, 1110
BtsI	GCAGTG	2 cut(s)	1000, 1127
BtsIMutI	CAGTG	3 cut(s)	873, 1000, 1127
BveI	ACCTGC	3 cut(s)	193, 1156, 1283
Cac8I	GCNNGC	4 cut(s)	70, 550, 633, 991
CaiI	CAGNNNCTG	1 cut(s)	154
CfoI	GCGC	2 cut(s)	70, 72
Cfr10I	RCCGGY	3 cut(s)	989, 1147, 1217
Cfr13I	GGNCC	4 cut(s)	174, 1187, 1215, 1243
CseI	GACGC	2 cut(s)	113, 1249
Csp6I	GTAC	1 cut(s)	53
CspAI	ACCGGT	2 cut(s)	1147, 1217
CspCI	CAANNNNNGTGG	2 cut(s)	256, 291
CviAII	CATG	3 cut(s)	662, 814, 1347
CviQI	GTAC	1 cut(s)	53
DdeI	CTNAG	3 cut(s)	480, 716, 822
DpnI	GATC	5 cut(s)	792, 806, 1071, 1099, 1274
DpnII	GATC	5 cut(s)	790, 804, 1069, 1097, 1272
DrdI	GACNNNNNNGTC	2 cut(s)	418, 1318
DseDI	GACNNNNNNGTC	2 cut(s)	418, 1318
EaeI	YGGCCR	1 cut(s)	1374
Eam1104I	CTCTTC	2 cut(s)	637, 1177
EarI	CTCTTC	2 cut(s)	637, 1177
EciI	GGCGGA	1 cut(s)	1221
Eco130I	CCWWGG	2 cut(s)	169, 267
Eco31I	GGTCTC	1 cut(s)	1138
Eco47I	GGWCC	4 cut(s)	174, 1187, 1215, 1243
Eco57I	CTGAAG	2 cut(s)	414, 1122
EcoO109I	RGGNCCY	2 cut(s)	1187, 1243
EcoRII	CCWGG	4 cut(s)	72, 879, 1189, 1245
EcoT14I	CCWWGG	2 cut(s)	169, 267
ErhI	CCWWGG	2 cut(s)	169, 267
Esp3I	CGTCTC	1 cut(s)	279
FaeI	CATG	3 cut(s)	665, 817, 1350
FaiI	YATR	9 cut(s)	41, 401, 524, 663, 737, 815, 909, 966, 1348
FaqI	GGGAC	3 cut(s)	142, 144, 1228
FatI	CATG	3 cut(s)	661, 813, 1346
Fnu4HI	GCNGC	8 cut(s)	146, 231, 569, 677, 844, 1163, 1233, 1290
FokI	GGATG	3 cut(s)	483, 908, 1097
Fsp4HI	GCNGC	8 cut(s)	146, 231, 569, 677, 844, 1163, 1233, 1290
FspBI	CTAG	4 cut(s)	56, 120, 297, 612
GlaI	GCGC	2 cut(s)	69, 71
GluI	GCNGC	8 cut(s)	146, 231, 569, 677, 844, 1163, 1233, 1290
GsaI	CCCAGC	2 cut(s)	163, 1272
GsuI	CTGGAG	6 cut(s)	779, 1198, 1212, 1268, 1325, 1359
HaeIII	GGCC	2 cut(s)	571, 1376
HapII	CCGG	7 cut(s)	128, 860, 990, 1126, 1148, 1218, 1377
HgaI	GACGC	2 cut(s)	113, 1249
HhaI	GCGC	2 cut(s)	70, 72
Hin1I	GRCGYC	1 cut(s)	124
Hin1II	CATG	3 cut(s)	665, 817, 1350
Hin6I	GCGC	2 cut(s)	68, 70
HinP1I	GCGC	2 cut(s)	68, 70
HindIII	AAGCTT	2 cut(s)	11, 692
HinfI	GANTC	5 cut(s)	47, 416, 434, 658, 1330
HpaII	CCGG	7 cut(s)	128, 860, 990, 1126, 1148, 1218, 1377
Hpy166II	GTNNAC	1 cut(s)	1356
Hpy188III	TCNNGA	2 cut(s)	796, 923
Hpy8I	GTNNAC	1 cut(s)	1356
Hpy99I	CGWCG	1 cut(s)	1265
HpyAV	CCTTC	7 cut(s)	438, 1018, 1027, 1068, 1096, 1196, 1309
HpyCH4III	ACNGT	3 cut(s)	501, 958, 1042
HpyCH4V	TGCA	8 cut(s)	145, 258, 325, 853, 1120, 1165, 1235, 1292
HpyF10VI	GCNNNNNNNGC	6 cut(s)	151, 160, 360, 700, 1343, 1373
HpyF3I	CTNAG	3 cut(s)	480, 716, 822
Hsp92I	GRCGYC	1 cut(s)	124
Hsp92II	CATG	3 cut(s)	665, 817, 1350
HspAI	GCGC	2 cut(s)	68, 70
KroI	GCCGGC	1 cut(s)	989
KroNI	GCCGGC	1 cut(s)	991
Kzo9I	GATC	5 cut(s)	790, 804, 1069, 1097, 1272
LmnI	GCTCC	3 cut(s)	227, 1111, 1343
Lsp1109I	GCAGC	6 cut(s)	157, 217, 855, 1149, 1219, 1276
LweI	GCATC	2 cut(s)	760, 886
MaeI	CTAG	4 cut(s)	56, 120, 297, 612
MaeIII	GTNAC	1 cut(s)	940
MalI	GATC	5 cut(s)	792, 806, 1071, 1099, 1274
MbiI	CCGCTC	3 cut(s)	568, 676, 1325
MboI	GATC	5 cut(s)	790, 804, 1069, 1097, 1272
MfeI	CAATTG	1 cut(s)	134
MluCI	AATT	5 cut(s)	134, 519, 532, 594, 1385
MlyI	GAGTC	2 cut(s)	56, 410
MmeI	TCCRAC	5 cut(s)	135, 262, 1132, 1202, 1259
MroNI	GCCGGC	1 cut(s)	989
MseI	TTAA	2 cut(s)	495, 696
MslI	CAYNNNNRTG	1 cut(s)	894
MspA1I	CMGCKG	2 cut(s)	548, 703
MspI	CCGG	7 cut(s)	128, 860, 990, 1126, 1148, 1218, 1377
MspR9I	CCNGG	6 cut(s)	74, 129, 860, 881, 1191, 1247
MunI	CAATTG	1 cut(s)	134
MvaI	CCWGG	4 cut(s)	74, 881, 1191, 1247
MvnI	CGCG	1 cut(s)	70
MwoI	GCNNNNNNNGC	6 cut(s)	151, 160, 360, 700, 1343, 1373
NaeI	GCCGGC	1 cut(s)	991
NciI	CCSGG	2 cut(s)	129, 860
NdeII	GATC	5 cut(s)	790, 804, 1069, 1097, 1272
NgoMIV	GCCGGC	1 cut(s)	989
NlaIII	CATG	3 cut(s)	665, 817, 1350
NlaIV	GGNNCC	6 cut(s)	61, 175, 864, 1077, 1130, 1216
PaqCI	CACCTGC	2 cut(s)	1156, 1283
PauI	GCGCGC	1 cut(s)	68
PdiI	GCCGGC	1 cut(s)	991
PfeI	GAWTC	3 cut(s)	434, 658, 1330
PfoI	TCCNGGA	3 cut(s)	127, 879, 1245
PinAI	ACCGGT	2 cut(s)	1147, 1217
PkrI	GCNGC	8 cut(s)	147, 232, 570, 678, 845, 1164, 1234, 1291
PleI	GAGTC	2 cut(s)	55, 410
PpsI	GAGTC	2 cut(s)	55, 410
PpuMI	RGGWCCY	2 cut(s)	1187, 1243
Psp5II	RGGWCCY	2 cut(s)	1187, 1243
Psp6I	CCWGG	4 cut(s)	72, 879, 1189, 1245
PspFI	CCCAGC	2 cut(s)	159, 1268
PspGI	CCWGG	4 cut(s)	72, 879, 1189, 1245
PspN4I	GGNNCC	6 cut(s)	61, 175, 864, 1077, 1130, 1216
PspPI	GGNCC	4 cut(s)	174, 1187, 1215, 1243
PspPPI	RGGWCCY	2 cut(s)	1187, 1243
PstI	CTGCAG	2 cut(s)	1167, 1294
PstNI	CAGNNNCTG	1 cut(s)	154
PteI	GCGCGC	1 cut(s)	68
PvuII	CAGCTG	1 cut(s)	548
RsaI	GTAC	1 cut(s)	54
RsaNI	GTAC	1 cut(s)	53
RseI	CAYNNNNRTG	1 cut(s)	894
SaqAI	TTAA	2 cut(s)	495, 696
SatI	GCNGC	8 cut(s)	146, 231, 569, 677, 844, 1163, 1233, 1290
Sau3AI	GATC	5 cut(s)	790, 804, 1069, 1097, 1272
Sau96I	GGNCC	4 cut(s)	174, 1187, 1215, 1243
ScaI	AGTACT	1 cut(s)	54
SchI	GAGTC	2 cut(s)	56, 410
ScrFI	CCNGG	6 cut(s)	74, 129, 860, 881, 1191, 1247
SfaNI	GCATC	2 cut(s)	760, 886
SfcI	CTRYAG	3 cut(s)	543, 1163, 1290
SinI	GGWCC	4 cut(s)	174, 1187, 1215, 1243
SmiMI	CAYNNNNRTG	1 cut(s)	894
SmlI	CTYRAG	4 cut(s)	511, 921, 984, 1031
SmoI	CTYRAG	4 cut(s)	511, 921, 984, 1031
Sse9I	AATT	5 cut(s)	134, 519, 532, 594, 1385
SsiI	CCGC	6 cut(s)	506, 568, 676, 703, 1206, 1323
SspMI	CTAG	4 cut(s)	56, 120, 297, 612
StyD4I	CCNGG	6 cut(s)	72, 127, 858, 879, 1189, 1245
StyI	CCWWGG	2 cut(s)	169, 267
TaaI	ACNGT	3 cut(s)	501, 958, 1042
TaqI	TCGA	3 cut(s)	475, 740, 1026
TaqII	GACCGA	1 cut(s)	1265
TasI	AATT	5 cut(s)	134, 519, 532, 594, 1385
TatI	WGTACW	1 cut(s)	52
TauI	GCSGC	2 cut(s)	571, 679
TfiI	GAWTC	3 cut(s)	434, 658, 1330
Tru1I	TTAA	2 cut(s)	495, 696
Tru9I	TTAA	2 cut(s)	495, 696
TscAI	CASTG	3 cut(s)	873, 1000, 1127
TseI	GCWGC	6 cut(s)	145, 230, 843, 1162, 1232, 1289
TspDTI	ATGAA	5 cut(s)	75, 504, 615, 815, 953
TspGWI	ACGGA	1 cut(s)	483
TspRI	CASTG	3 cut(s)	873, 1000, 1127
VpaK11BI	GGWCC	4 cut(s)	174, 1187, 1215, 1243
XapI	RAATTY	2 cut(s)	532, 1385
XcmI	CCANNNNNNNNNTGG	1 cut(s)	524
XspI	CTAG	4 cut(s)	56, 120, 297, 612
ZrmI	AGTACT	1 cut(s)	54

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.