Rmu_sc0005327.1_g000024
NAC Family

(NAC) domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005327.1
Physical Location & Seq
Reverse (-)
111277 .. 112681
1405 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005327.1_g000024.1.cds

Sequence Viewer

Length: 1356 bp
atgactctggatcaacttgatgtgggtgtggtgaagacgtttcaccctactgaagctgagttggtgggtttctttctatacaacaagatatccatggcctcaaacccaggcaatcatattcagaccttccctgaaatttgtatatacggcgagacaggcttaccaccttgggagatatggagggtatatcagcaattcaagtttcccccccaagattttctctacttcttctcccgggccaagaaagtgagccccaacaaatctcgcaactctcgcccggttggctctgatggaggaacgtggagcgagacggaagccggtaggcctgtgtatatcagtggaagtgaagaagcgtttgggaaagtcaggaagttttggtatgaaaagaacaaggacaaaacgtttgtgcatcacgctgcttggttgatggaggagtacaccatcaaccaagcaccggatctagctttgtgccgactcaaaatcaatgacaaaggaggaggaagaaaaaagaggaagaagagttcgaacgtggagcgagacggaagccggaagtttcgttatgaaaagaacaaggacaaaacgtttgtgcatcacgctgcttggttgatggaggagtacaccatcaaccaagcaccggatctggctttgtgcagactcaaagttaatgataaaggaggaggaagaaaaaagaggaagaagagttttgatgagactaacgaggatcagaatgtgagaagcaaaaagtgtttgaaaaaccgaaaagttgaaccgagaagagatcaaactagtttcttggatcctgaggagcaacaagaaggcagtgcttcctttgctactactacttcacagctaattctctctccctatcatcatgaagatgatcaagtggttcaggtggttccggagaacaattacgattatgacaagctgcagcagatcctctttagtgatgatgattgtatggatgagaatctaatgttctctcccactatcttgtttgatgatgctcagcttatggcttatgttgatcgatcagtatccagtgagcaacaacaacaacaagactcggattattcacttgcgccgcaacagcaattggaacctgacaataggtgtcaagaggaggaccaaatacaacaagaagatcagccctcttcctctcattctcatgagcagcagcagctcatcggtgatgacgatctgatgatttctggccaacgtgactataatattccactcgataacgacttcttatggtctgatgaatttaatggactcttgactcatgaagatcagctgggagctctgccatggtgggaaactgatgatcagtttcagtattctgacatcttgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

451

Amino Acids

52.41

Weight (kDa)

4.99

Isoelectric Point (pI)

51.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000636)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 901
AciI CCGC 1 cut(s) 1085
AclI AACGTT 2 cut(s) 401, 581
AclWI GGATC 7 cut(s) 18, 465, 645, 729, 791, 804, 931
AcoI YGGCCR 1 cut(s) 1213
AcsI RAATTY 2 cut(s) 135, 1265
AcuI CTGAAG 1 cut(s) 72
AfaI GTAC 2 cut(s) 437, 617
AfiI CCNNNNNNNGG 2 cut(s) 454, 634
AgsI TTSAA 3 cut(s) 199, 751, 767
AhlI ACTAGT 1 cut(s) 785
AjnI CCWGG 1 cut(s) 106
AjuI GAANNNNNNNTTGG 2 cut(s) 339, 371
AloI GAACNNNNNNTCC 2 cut(s) 505, 537
AluBI AGCT 8 cut(s) 56, 464, 850, 928, 1012, 1183, 1297, 1304
AluI AGCT 8 cut(s) 56, 464, 850, 928, 1012, 1183, 1297, 1304
Alw21I GWGCWC 1 cut(s) 1306
Alw26I GTCTC 4 cut(s) 146, 302, 531, 704
AlwI GGATC 7 cut(s) 18, 465, 645, 729, 791, 804, 931
Ama87I CYCGRG 1 cut(s) 234
Aor13HI TCCGGA 1 cut(s) 901
AoxI GGCC 4 cut(s) 96, 237, 323, 1213
ApeKI GCWGC 7 cut(s) 416, 596, 928, 931, 1174, 1177, 1180
ApoI RAATTY 2 cut(s) 135, 1265
ArsI GACNNNNNNTTYG 4 cut(s) 386, 418, 566, 598
AspLEI GCGC 1 cut(s) 1084
AspS9I GGNCC 2 cut(s) 237, 1126
AsuC2I CCSGG 3 cut(s) 235, 236, 278
AsuHPI GGTGA 3 cut(s) 35, 43, 1202
AsuII TTCGAA 1 cut(s) 524
AvaI CYCGRG 1 cut(s) 234
AvaII GGWCC 1 cut(s) 1126
AxyI CCTNAGG 1 cut(s) 801
BalI TGGCCA 1 cut(s) 1215
BamHI GGATCC 1 cut(s) 796
BanII GRGCYC 2 cut(s) 254, 1306
BbsI GAAGAC 1 cut(s) 41
Bbv12I GWGCWC 1 cut(s) 1306
BbvI GCAGC 7 cut(s) 403, 583, 915, 943, 1186, 1189, 1192
BccI CCATC 5 cut(s) 284, 421, 449, 601, 629
BceAI ACGGC 1 cut(s) 163
BciT130I CCWGG 1 cut(s) 108
BciVI GTATCC 1 cut(s) 1048
BclI TGATCA 2 cut(s) 880, 1327
BcnI CCSGG 3 cut(s) 235, 236, 278
BcoDI GTCTC 4 cut(s) 146, 302, 531, 704
BcuI ACTAGT 1 cut(s) 785
BfaI CTAG 2 cut(s) 461, 786
BfmI CTRYAG 1 cut(s) 929
BfuI GTATCC 1 cut(s) 1048
BglI GCCNNNNNGGC 1 cut(s) 282
BisI GCNGC 8 cut(s) 417, 597, 929, 932, 1085, 1175, 1178, 1181
BlpI GCTNAGC 1 cut(s) 1008
BlsI GCNGC 8 cut(s) 418, 598, 930, 933, 1086, 1176, 1179, 1182
Bme1390I CCNGG 4 cut(s) 108, 235, 236, 278
Bme18I GGWCC 1 cut(s) 1126
BmeT110I CYCGRG 1 cut(s) 234
BmgT120I GGNCC 2 cut(s) 237, 1126
BmiI GGNNCC 3 cut(s) 798, 900, 1101
BmrFI CCNGG 4 cut(s) 108, 235, 236, 278
BmsI GCATC 3 cut(s) 418, 598, 994
BpiI GAAGAC 1 cut(s) 41
Bpu1102I GCTNAGC 1 cut(s) 1008
Bpu14I TTCGAA 1 cut(s) 524
BpuMI CCSGG 3 cut(s) 235, 236, 278
Bsa29I ATCGAT 1 cut(s) 1030
BsaBI GATNNNNATC 3 cut(s) 969, 1036, 1197
BsaJI CCNNGG 5 cut(s) 93, 106, 167, 234, 1310
BsaWI WCCGGW 3 cut(s) 454, 634, 901
BsaXI ACNNNNNCTCC 2 cut(s) 215, 245
Bsc4I CCNNNNNNNGG 2 cut(s) 454, 634
Bse118I RCCGGY 1 cut(s) 317
Bse1I ACTGG 1 cut(s) 1041
Bse21I CCTNAGG 1 cut(s) 801
Bse8I GATNNNNATC 3 cut(s) 969, 1036, 1197
BseAI TCCGGA 1 cut(s) 901
BseBI CCWGG 1 cut(s) 108
BseCI ATCGAT 1 cut(s) 1030
BseDI CCNNGG 5 cut(s) 93, 106, 167, 234, 1310
BseGI GGATG 1 cut(s) 970
BseJI GATNNNNATC 3 cut(s) 969, 1036, 1197
BseLI CCNNNNNNNGG 2 cut(s) 454, 634
BseMII CTCAG 3 cut(s) 48, 792, 1022
BseNI ACTGG 1 cut(s) 1041
BseRI GAGGAG 6 cut(s) 446, 510, 626, 690, 818, 1136
BseXI GCAGC 7 cut(s) 403, 583, 915, 943, 1186, 1189, 1192
BseYI CCCAGC 1 cut(s) 1297
BsgI GTGCAG 1 cut(s) 670
BshFI GGCC 4 cut(s) 98, 239, 325, 1215
BshVI ATCGAT 1 cut(s) 1030
BsiHKAI GWGCWC 1 cut(s) 1306
BsiHKCI CYCGRG 1 cut(s) 234
BsiSI CCGG 7 cut(s) 235, 278, 318, 455, 547, 635, 902
BslI CCNNNNNNNGG 2 cut(s) 454, 634
BsmAI GTCTC 4 cut(s) 146, 302, 531, 704
BsmBI CGTCTC 2 cut(s) 302, 531
BsnI GGCC 4 cut(s) 98, 239, 325, 1215
BsoBI CYCGRG 1 cut(s) 234
Bsp119I TTCGAA 1 cut(s) 524
Bsp1286I GDGCHC 2 cut(s) 254, 1306
Bsp13I TCCGGA 1 cut(s) 901
Bsp1720I GCTNAGC 1 cut(s) 1008
Bsp19I CCATGG 2 cut(s) 93, 1310
BspACI CCGC 1 cut(s) 1085
BspANI GGCC 4 cut(s) 98, 239, 325, 1215
BspCNI CTCAG 3 cut(s) 49, 793, 1021
BspDI ATCGAT 1 cut(s) 1030
BspEI TCCGGA 1 cut(s) 901
BspHI TCATGA 3 cut(s) 871, 1168, 1285
BspLI GGNNCC 3 cut(s) 798, 900, 1101
BspMAI CTGCAG 1 cut(s) 933
BspPI GGATC 7 cut(s) 18, 465, 645, 729, 791, 804, 931
BspT104I TTCGAA 1 cut(s) 524
BsrFI RCCGGY 1 cut(s) 317
BsrI ACTGG 1 cut(s) 1041
BssAI RCCGGY 1 cut(s) 317
BssECI CCNNGG 5 cut(s) 93, 106, 167, 234, 1310
BssT1I CCWWGG 3 cut(s) 93, 167, 1310
Bst2UI CCWGG 1 cut(s) 108
Bst6I CTCTTC 4 cut(s) 512, 692, 769, 1159
BstBI TTCGAA 1 cut(s) 524
BstDEI CTNAG 3 cut(s) 57, 801, 1008
BstDSI CCRYGG 2 cut(s) 93, 1310
BstF5I GGATG 1 cut(s) 970
BstHHI GCGC 1 cut(s) 1084
BstMAI GTCTC 4 cut(s) 146, 302, 531, 704
BstMWI GCNNNNNNNGC 6 cut(s) 156, 273, 282, 830, 1090, 1180
BstNI CCWGG 1 cut(s) 108
BstSCI CCNGG 4 cut(s) 106, 233, 234, 276
BstSFI CTRYAG 1 cut(s) 929
BstV1I GCAGC 7 cut(s) 403, 583, 915, 943, 1186, 1189, 1192
BstV2I GAAGAC 1 cut(s) 41
BstX2I RGATCY 4 cut(s) 457, 637, 796, 936
BstYI RGATCY 4 cut(s) 457, 637, 796, 936
Bsu15I ATCGAT 1 cut(s) 1030
Bsu36I CCTNAGG 1 cut(s) 801
BsuI GTATCC 1 cut(s) 1048
BsuRI GGCC 4 cut(s) 98, 239, 325, 1215
BsuTUI ATCGAT 1 cut(s) 1030
BtgI CCRYGG 2 cut(s) 93, 1310
BtsCI GGATG 1 cut(s) 970
BtsI GCAGTG 1 cut(s) 826
BtsIMutI CAGTG 3 cut(s) 343, 826, 1048
CciI TCATGA 3 cut(s) 871, 1168, 1285
CfoI GCGC 1 cut(s) 1084
Cfr10I RCCGGY 1 cut(s) 317
Cfr13I GGNCC 2 cut(s) 237, 1126
Cfr9I CCCGGG 1 cut(s) 234
ClaI ATCGAT 1 cut(s) 1030
Csp6I GTAC 2 cut(s) 436, 616
CviAII CATG 5 cut(s) 94, 872, 1169, 1286, 1311
CviQI GTAC 2 cut(s) 436, 616
DdeI CTNAG 3 cut(s) 57, 801, 1008
EaeI YGGCCR 1 cut(s) 1213
Eam1104I CTCTTC 4 cut(s) 512, 692, 769, 1159
EarI CTCTTC 4 cut(s) 512, 692, 769, 1159
Ecl136II GAGCTC 1 cut(s) 1304
Eco130I CCWWGG 3 cut(s) 93, 167, 1310
Eco147I AGGCCT 1 cut(s) 325
Eco24I GRGCYC 2 cut(s) 254, 1306
Eco32I GATATC 1 cut(s) 90
Eco47I GGWCC 1 cut(s) 1126
Eco53kI GAGCTC 1 cut(s) 1304
Eco57I CTGAAG 1 cut(s) 72
Eco81I CCTNAGG 1 cut(s) 801
Eco88I CYCGRG 1 cut(s) 234
EcoICRI GAGCTC 1 cut(s) 1304
EcoRII CCWGG 1 cut(s) 106
EcoRV GATATC 1 cut(s) 90
EcoT14I CCWWGG 3 cut(s) 93, 167, 1310
EcoT38I GRGCYC 2 cut(s) 254, 1306
ErhI CCWWGG 3 cut(s) 93, 167, 1310
Esp3I CGTCTC 2 cut(s) 302, 531
FaeI CATG 5 cut(s) 97, 875, 1172, 1289, 1314
FatI CATG 5 cut(s) 93, 871, 1168, 1285, 1310
FbaI TGATCA 2 cut(s) 880, 1327
Fnu4HI GCNGC 8 cut(s) 417, 597, 929, 932, 1085, 1175, 1178, 1181
FokI GGATG 1 cut(s) 977
FriOI GRGCYC 2 cut(s) 254, 1306
Fsp4HI GCNGC 8 cut(s) 417, 597, 929, 932, 1085, 1175, 1178, 1181
FspBI CTAG 2 cut(s) 461, 786
GlaI GCGC 1 cut(s) 1083
GluI GCNGC 8 cut(s) 417, 597, 929, 932, 1085, 1175, 1178, 1181
GsaI CCCAGC 1 cut(s) 1301
HaeIII GGCC 4 cut(s) 98, 239, 325, 1215
HapII CCGG 7 cut(s) 235, 278, 318, 455, 547, 635, 902
HhaI GCGC 1 cut(s) 1084
Hin1II CATG 5 cut(s) 97, 875, 1172, 1289, 1314
Hin6I GCGC 1 cut(s) 1082
HinP1I GCGC 1 cut(s) 1082
HinfI GANTC 7 cut(s) 4, 474, 654, 970, 1064, 1275, 1282
HpaII CCGG 7 cut(s) 235, 278, 318, 455, 547, 635, 902
HphI GGTGA 3 cut(s) 35, 43, 1202
Hpy166II GTNNAC 2 cut(s) 438, 618
Hpy188I TCNGA 7 cut(s) 123, 289, 726, 1069, 1203, 1261, 1345
Hpy188III TCNNGA 9 cut(s) 8, 367, 800, 872, 902, 1118, 1169, 1279, 1286
Hpy8I GTNNAC 2 cut(s) 438, 618
HpyAV CCTTC 2 cut(s) 136, 809
HpyCH4IV ACGT 6 cut(s) 38, 299, 401, 528, 581, 1219
HpyCH4V TGCA 4 cut(s) 409, 589, 651, 931
HpyF10VI GCNNNNNNNGC 6 cut(s) 156, 273, 282, 830, 1090, 1180
HpyF3I CTNAG 3 cut(s) 57, 801, 1008
HpySE526I ACGT 6 cut(s) 38, 299, 401, 528, 581, 1219
Hsp92II CATG 5 cut(s) 97, 875, 1172, 1289, 1314
HspAI GCGC 1 cut(s) 1082
Kpn2I TCCGGA 1 cut(s) 901
Ksp22I TGATCA 2 cut(s) 880, 1327
LmnI GCTCC 4 cut(s) 303, 532, 805, 1301
Lsp1109I GCAGC 7 cut(s) 403, 583, 915, 943, 1186, 1189, 1192
LweI GCATC 3 cut(s) 418, 598, 994
MaeI CTAG 2 cut(s) 461, 786
MaeII ACGT 6 cut(s) 38, 299, 401, 528, 581, 1219
MaeIII GTNAC 1 cut(s) 1220
MfeI CAATTG 1 cut(s) 1094
MflI RGATCY 4 cut(s) 457, 637, 796, 936
MhlI GDGCHC 2 cut(s) 254, 1306
MlsI TGGCCA 1 cut(s) 1215
MluCI AATT 6 cut(s) 135, 194, 852, 910, 1094, 1265
MluNI TGGCCA 1 cut(s) 1215
MlyI GAGTC 5 cut(s) 468, 648, 1058, 1269, 1276
Mox20I TGGCCA 1 cut(s) 1215
MroI TCCGGA 1 cut(s) 901
MscI TGGCCA 1 cut(s) 1215
MseI TTAA 2 cut(s) 663, 1269
MslI CAYNNNNRTG 2 cut(s) 876, 1167
Msp20I TGGCCA 1 cut(s) 1215
MspA1I CMGCKG 1 cut(s) 1297
MspI CCGG 7 cut(s) 235, 278, 318, 455, 547, 635, 902
MspR9I CCNGG 4 cut(s) 108, 235, 236, 278
MunI CAATTG 1 cut(s) 1094
MvaI CCWGG 1 cut(s) 108
MwoI GCNNNNNNNGC 6 cut(s) 156, 273, 282, 830, 1090, 1180
NciI CCSGG 3 cut(s) 235, 236, 278
NcoI CCATGG 2 cut(s) 93, 1310
NlaIII CATG 5 cut(s) 97, 875, 1172, 1289, 1314
NlaIV GGNNCC 3 cut(s) 798, 900, 1101
NmuCI GTSAC 1 cut(s) 1220
NspV TTCGAA 1 cut(s) 524
PagI TCATGA 3 cut(s) 871, 1168, 1285
PceI AGGCCT 1 cut(s) 325
PcsI WCGNNNNNNNCGW 1 cut(s) 1194
PfeI GAWTC 1 cut(s) 970
PkrI GCNGC 8 cut(s) 418, 598, 930, 933, 1086, 1176, 1179, 1182
PleI GAGTC 5 cut(s) 468, 648, 1058, 1269, 1276
PpsI GAGTC 5 cut(s) 468, 648, 1058, 1269, 1276
Psp124BI GAGCTC 1 cut(s) 1306
Psp1406I AACGTT 2 cut(s) 401, 581
Psp6I CCWGG 1 cut(s) 106
PspFI CCCAGC 1 cut(s) 1297
PspGI CCWGG 1 cut(s) 106
PspN4I GGNNCC 3 cut(s) 798, 900, 1101
PspPI GGNCC 2 cut(s) 237, 1126
PstI CTGCAG 1 cut(s) 933
PsuI RGATCY 4 cut(s) 457, 637, 796, 936
PvuII CAGCTG 1 cut(s) 1297
RsaI GTAC 2 cut(s) 437, 617
RsaNI GTAC 2 cut(s) 436, 616
RseI CAYNNNNRTG 2 cut(s) 876, 1167
SacI GAGCTC 1 cut(s) 1306
SaqAI TTAA 2 cut(s) 663, 1269
SatI GCNGC 8 cut(s) 417, 597, 929, 932, 1085, 1175, 1178, 1181
Sau96I GGNCC 2 cut(s) 237, 1126
SchI GAGTC 5 cut(s) 468, 648, 1058, 1269, 1276
ScrFI CCNGG 4 cut(s) 108, 235, 236, 278
SduI GDGCHC 2 cut(s) 254, 1306
SfaNI GCATC 3 cut(s) 418, 598, 994
SfcI CTRYAG 1 cut(s) 929
SfuI TTCGAA 1 cut(s) 524
SinI GGWCC 1 cut(s) 1126
SmaI CCCGGG 1 cut(s) 236
SmiMI CAYNNNNRTG 2 cut(s) 876, 1167
SpeI ACTAGT 1 cut(s) 785
Sse9I AATT 6 cut(s) 135, 194, 852, 910, 1094, 1265
SseBI AGGCCT 1 cut(s) 325
SsiI CCGC 1 cut(s) 1085
SspI AATATT 1 cut(s) 1231
SspMI CTAG 2 cut(s) 461, 786
SstI GAGCTC 1 cut(s) 1306
StuI AGGCCT 1 cut(s) 325
StyD4I CCNGG 4 cut(s) 106, 233, 234, 276
StyI CCWWGG 3 cut(s) 93, 167, 1310
TaiI ACGT 6 cut(s) 41, 302, 404, 531, 584, 1222
TaqI TCGA 3 cut(s) 524, 1030, 1239
TasI AATT 6 cut(s) 135, 194, 852, 910, 1094, 1265
TatI WGTACW 2 cut(s) 435, 615
TauI GCSGC 1 cut(s) 1087
TfiI GAWTC 1 cut(s) 970
Tru1I TTAA 2 cut(s) 663, 1269
Tru9I TTAA 2 cut(s) 663, 1269
TscAI CASTG 3 cut(s) 343, 826, 1048
TseFI GTSAC 1 cut(s) 1220
TseI GCWGC 7 cut(s) 416, 596, 928, 931, 1174, 1177, 1180
Tsp45I GTSAC 1 cut(s) 1220
TspDTI ATGAA 5 cut(s) 396, 576, 888, 1278, 1302
TspGWI ACGGA 2 cut(s) 326, 555
TspMI CCCGGG 1 cut(s) 234
TspRI CASTG 3 cut(s) 343, 826, 1048
VpaK11BI GGWCC 1 cut(s) 1126
XapI RAATTY 2 cut(s) 135, 1265
XmaI CCCGGG 1 cut(s) 234
XspI CTAG 2 cut(s) 461, 786
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.