Rorug05G0219000
NAC Family

(NAC) domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
22513849 .. 22526592
12744 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0219000.1

Sequence Viewer

Length: 3975 bp
ATGTTTCTCAGCAAAGAAATTGAGGATCTGCATGATGATGACTTTGAGGGATCCAAAACTGAGCACTGTATATTCACAGAGGTTTTCTTTGGTGGTGACGGTGCTAGCACGAGTAAGAGATGTCTTGTAACTGGAGTGATTAACTTTGAATGTGAGTCAAGTAAGACCACAGATACATCACTCTCTTCAAACAGTGAAAACTCAATTGTAACGAATCAGTCAAAGGAGTTTTATAATGCTACTGAGGAATCTAGAGAAATTTTTGGACCAGGGTTTTTCCCGGACAGATCCGCTTGGCTAGATACGAATGGCGAAGATGTGAGTGCTAAGAGAATGAAGTTTTCAGTTGATGAACTTCCTAGTGCAAAACCTGGTTTAGGAAAGGTAATAGATTTGTCCATAGTTTCAAAAGAAATGGTTTCTGGCTTGTCTGGTACTACAGACTCCATTACTGAAACACTGACATTTCGTTTGGTCGAATCTTCGAGTGAGGGAGTTACATCTAGTTGCTATCTGTTAAAGCAGCCTGCAAAACTTGACGGAGGGGCCATAGTAGGTGACTCTGATGTTTCAAAGTGCAGATTACCAACTTCTGATGGGAATGATGGAAAGGAACTATGTGCAAGTAAAGCTGTTGCTTCACCTGTTTCCCAGGAGAGCTTCTCAACCATGCTTTTGGCTACAGGTTCCCCTGTCACTCTATTGGATAAGTTGGGAACTCCTCTAGGTGCTGAGGGAAAACCCGAGGGGTTGGATAGATCTGCTATTGCCTTCAAGAAAGACTCTAGTAAGGATCCTCGTCCGCTTCTCCAGTATGATGTCAATCGCTTACTTGAAGCTGCAGGATGGCATATTCAGAGGCGGAAAAGACCTAGTAGAGCTTATTTGGAGTCTGTTTATGTAACACCAAAAGGAAGGTTAATTCGTGACTTCCCCAAAGCTTGGCGGTTGTGTGGTGAACTTTTGTTTGCAGATGGGTGCAGTTCGCTGCAGAGAGATGATGCAAAGGAATGGTCCGATATTAATCAGTTTTGGTCAGATCTATCTGGTGCTTTAGTAAATTTTGAGAAAGAGATGAATCAACCAGAACCGACTACTGAATTGGCTTATTGGTGGAGGCTCTTAGATCCCTTTGTGATTGTTGTGTTTATTGAGAGAAAGATTCTTGCTCTGAGAAAAGGAGAGACTGTTAAAGCAACTCAAAGTTTAGCTATTAATACTAATCATAAGATTTTGGCCTTGACTAATGCGAATAGTATCAAAAATCATCTGGAGAAGGAAGATGTTTCTGCTCCCCTCTGTTATACAACTCTGGCAGGAGGGAGTGGATCGGCAGTTTCTGAGGGGAATCTTGTGGAAGATGTATCGGTGGTTTGTTCTGAGGAAAGAGATGAACTGCTGGGAGGCATGGCTTACGATAAGCTGGGAGATAATCTGCAGGGGTCTCTGCAGTACCAAATAAAATGCGCAAGTAGTGTTGTTTTGAAAAAGAAAATAAGAAGGAAGTGTAAAAAGATTTCTGAAATGGAACCAAGCTCCACTTCTAGTAATAATATTGGTTTGCAATGCATTGATGTCAGTGGTAACCAGTCAAAGTTGAAAGAGGTCGATGGTGACCTTGCAGGCAATATAAGAAGTAAAGGAAGTTGCAAGAAGTCCTCATCTCTCAACTCCTCCCAGCATGTGGTTGGTGAAAAAAGCCCAGAGTCTATGAAAAATGTTCGTGAATATGATTATTTTAAAACTGGAAAGAAGAAACCATCTAGATGTGAAATCAAAGATGACGACTTACTGGTTTCAGCTATCATAAAGAACACAGATTTTAGTGCAAGTCCTGGTCGATGTTCTTCTAGAAAGAAAGGCCGCAAATCTAGAGCTCATAGGAAGCATAAAAGTCAAAAGAGCCATTGCAAGTTGCTTCTTAGAAGCCTGGGTAGTGTAGGAGTAAAAACAGTTCTGTCTTGGATGCTTGATGCTGGGGTCATATTTCTGGATGATGTGATCCAGTATCGGAATACTAAGGATGGTTCTGTTATTAAAGATGGTCTAGTTACCAGGGATGGTATTTTTTGCAAGTGTTGCAGAGAAGTACTTACAGTTTCTGAGTTCAAGATTCATGGTGGGTTCAGACTAAACCGTCCATGTTTAAATCTTTTTCTGGAATCTGGTAAGGCCTTCTCCTTATGCCAGCTTCAAGCCTGGTCAGCTGAATACAAGTCCAGGAAACGGCGGACTCAAGTGGTGCGAGCTGATGAAAATGATGAAAATGATGATTCTTGCGGACTTTGTGGTGAAGGGGGCGAGCTGATATGCTGTGATAACTGCCCCTCTACTTTTCATCAGGCTTGTTTGTCTCTGCAGGAGCTTCCTGAAGGCAGCTGGTATTGTCCAAATTGCACCTGTTGGATATGTGGTCATTTTGTTACCGACAAAGGGGCTTCAAGTGCTTCTGATGGATTTAAATGTTCGCAGTGTGAGCATAAATATCATGAGGCTTGTCTTTCAGAAAAATCCATAAACGTACTGGATTCTTGGTTCTGTGAAAGAAGCTGTCAAGAGGTTTACTCAGGTCTTCAGTCTCATGTTGGCTACATTAATCATGTTGTCGATGGCTTTTCATGGACACTTCTTAGATGCATTCGTGATGACCAAAAAGTTCATTCTGCCCAACGGTTAGCACTGAAAGCAGAATGCAATACAAGATTAGCTGTTGCTCTTACTGTCATGGAAGAAAGCTTTCTGTCTATGGTGGATCCTAGAACAGGCATAGACATGATACCCCAAGTTTTGTACAGTTGGGGGTCTGAGTTTGCTCGTTTGAATTTTCAAGGCTTCTACACTGCAGTCTTAGAGAAAGATGATGTGCTGATATCTGTAGCATCCATCAGGGTGCATGGAACAACAGTTGCAGAGATGCCACTTATTGCAACTTGCAGTCGATACCGTCGCCAGGGAATGTGCCGACGCCTTCTGACTGCTATTGAAGAGATGCTGATATCTTTTAAGGTGGAAAAGCTTGTAATAGCTGCCATTCCAGATTTGGTGGGGACATGGACAGAGGGTTTTGGCTTTATACCTGTAGAAGACAGAGAAAAGCAAAGCTTGAACAAGATCAATTTGATGGTTTTTCCTGGAACGGTTTTACTCAAGAAGCCATTATGTGAAAATAAAACAGCATATAGACATCCTGGAACATGTCATACATCATCCTTGGAAACGGGAGGATTGAGAAAAGAATGTTGTTCTGAAGAAGAGCCCATGGTTGAGTTTGTGCACTCTGATGATACTTGTGGAAACAAAACTGGTGCTGAAGCAGGAATTGAATTTGTAGAAGGTACTAATTTAGAAGAATGTGATGATGGTAGTAAATTATTTATTACTGCTGATACTGGACCAGTTGGTACATCAGAAGAAGGCAAAAACAAAGCAACTGAGGTAGGTATTCAATCCAGAGACGCCATTGTTGGGTTTGTACAGCAACAAGTTGTCCATTGTTCTGCTAACAAAGCTGGTGCTGAAATGGAAATTAAAAGCAAGAAGTCAGTGGAATCTGAATCGTATGCTGAAACTGGTATTAAGGCTGTAAAGCAATCGGATGGGATATGTCATGTGGACATAGTTGCTGATGCAGTTAGACTTGAAGTCGAGAATTTCCAGGAATTTGAAGCTGTAAAGCAATCAAAAATCTGTTGCCGGATCGAAGTAGGCAATGAATCAGAAATAAGGCAGATGACTGGCAAGGATTTGCTGGAATCTGAAGTCGGCAGTGAACCAGAAGGTAGAGTTTTTGAAAGCAATCTTATGCAAGTGGGTGAAGCCAAAATAAGTACTTTGCAGGAGCAATTTTTAAAGCTGTCTTGTGAAGAACCAGCTTCAGCAGTAGAAAATAGCAAGCCGGAAACGGTTACTAATGTTGAATCCTTGGAAATGTATGATGAAACACAGCTTTCTTTGGATGATCAATCGCAAAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1324

Amino Acids

145.98

Weight (kDa)

5.45

Isoelectric Point (pI)

41.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TDBD PF16135 682 - 732 1.5e-15 Tify domain binding domain
PHD PF00628 760 - 799 9.9e-08 PHD-finger
IDM1_C PF23209 913 - 1052 2e-58 Increased DNA methylation 1, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000636)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 234
AasI GACNNNNNNGTC 1 cut(s) 2136
Acc16I TGCGCA 1 cut(s) 1468
AccB7I CCANNNNNTGG 2 cut(s) 942, 1684
AciI CCGC 7 cut(s) 291, 803, 862, 946, 1864, 2230, 2280
AcsI RAATTY 6 cut(s) 258, 1060, 2821, 3323, 3649, 3659
AcuI CTGAAG 6 cut(s) 2391, 2558, 3267, 3330, 3777, 3858
AcyI GRCGYC 2 cut(s) 2965, 3456
AfaI GTAC 9 cut(s) 436, 1454, 2091, 2523, 2792, 3337, 3403, 3474, 3829
AfiI CCNNNNNNNGG 8 cut(s) 377, 942, 1684, 2226, 2433, 2762, 2950, 3465
AflIII ACRYGT 1 cut(s) 3194
AhdI GACNNNNNGTC 1 cut(s) 3641
AjuI GAANNNNNNNTTGG 2 cut(s) 1525, 1557
AloI GAACNNNNNNTCC 2 cut(s) 2519, 2551
Alw21I GWGCWC 3 cut(s) 66, 1879, 3276
Alw26I GTCTC 5 cut(s) 1178, 1449, 2358, 2583, 3447
Alw44I GTGCAC 1 cut(s) 3272
AlwNI CAGNNNCTG 2 cut(s) 1340, 2102
Ama87I CYCGRG 1 cut(s) 743
AoxI GGCC 4 cut(s) 546, 1236, 1861, 2172
ApaLI GTGCAC 1 cut(s) 3272
ApeKI GCWGC 5 cut(s) 523, 839, 988, 2376, 3026
ApoI RAATTY 6 cut(s) 258, 1060, 2821, 3323, 3649, 3659
ArsI GACNNNNNNTTYG 4 cut(s) 454, 486, 998, 1030
AseI ATTAAT 3 cut(s) 1023, 1215, 2595
Asp700I GAANNNNTTC 1 cut(s) 2736
AspLEI GCGC 1 cut(s) 1469
AspS9I GGNCC 4 cut(s) 266, 546, 1014, 3392
AsuC2I CCSGG 1 cut(s) 281
AsuHPI GGTGA 8 cut(s) 107, 569, 633, 968, 1625, 1703, 2303, 3824
AsuNHI GCTAGC 1 cut(s) 104
AvaI CYCGRG 1 cut(s) 743
AvaII GGWCC 3 cut(s) 266, 1014, 3392
BaeGI GKGCMC 1 cut(s) 3276
BamHI GGATCC 3 cut(s) 50, 793, 2752
BanII GRGCYC 2 cut(s) 1879, 3258
BauI CACGAG 1 cut(s) 109
BbsI GAAGAC 2 cut(s) 2564, 3090
Bbv12I GWGCWC 3 cut(s) 66, 1879, 3276
BbvCI CCTCAGC 1 cut(s) 732
BbvI GCAGC 5 cut(s) 535, 826, 975, 2388, 3013
BceAI ACGGC 1 cut(s) 2243
BclI TGATCA 1 cut(s) 3958
BcnI CCSGG 1 cut(s) 281
BcoDI GTCTC 5 cut(s) 1178, 1449, 2358, 2583, 3447
BglII AGATCT 2 cut(s) 758, 1039
BisI GCNGC 6 cut(s) 524, 840, 989, 1864, 2377, 3027
BlsI GCNGC 6 cut(s) 525, 841, 990, 1865, 2378, 3028
BmcAI AGTACT 2 cut(s) 2091, 3829
Bme18I GGWCC 3 cut(s) 266, 1014, 3392
BmeRI GACNNNNNGTC 1 cut(s) 3641
BmeT110I CYCGRG 1 cut(s) 743
BmgT120I GGNCC 4 cut(s) 266, 546, 1014, 3392
BmiI GGNNCC 6 cut(s) 52, 547, 688, 795, 1530, 2754
BmsI GCATC 8 cut(s) 991, 1956, 1963, 2624, 2888, 2904, 2979, 3616
BmtI GCTAGC 1 cut(s) 108
BpiI GAAGAC 2 cut(s) 2564, 3090
BplI GAGNNNNNCTC 4 cut(s) 647, 679, 2549, 2581
BpmI CTGGAG 3 cut(s) 153, 794, 1292
Bpu10I CCTNAGC 1 cut(s) 732
BpuEI CTTGAG 2 cut(s) 2220, 3131
BpuMI CCSGG 1 cut(s) 281
BsaBI GATNNNNATC 2 cut(s) 822, 1023
BsaHI GRCGYC 2 cut(s) 2965, 3456
BsaI GGTCTC 1 cut(s) 1449
BsaJI CCNNGG 9 cut(s) 269, 651, 744, 1930, 2055, 2950, 3210, 3258, 3921
BsaXI ACNNNNNCTCC 2 cut(s) 1173, 1203
Bsc4I CCNNNNNNNGG 8 cut(s) 377, 942, 1684, 2226, 2433, 2762, 2950, 3465
Bse3DI GCAATG 3 cut(s) 1571, 1906, 3715
Bse8I GATNNNNATC 2 cut(s) 822, 1023
BseDI CCNNGG 9 cut(s) 269, 651, 744, 1930, 2055, 2950, 3210, 3258, 3921
BseJI GATNNNNATC 2 cut(s) 822, 1023
BseLI CCNNNNNNNGG 8 cut(s) 377, 942, 1684, 2226, 2433, 2762, 2950, 3465
BseMI GCAATG 3 cut(s) 1571, 1906, 3715
BseRI GAGGAG 2 cut(s) 711, 1663
BseSI GKGCMC 1 cut(s) 3276
BseXI GCAGC 5 cut(s) 535, 826, 975, 2388, 3013
BseYI CCCAGC 4 cut(s) 1399, 1423, 1677, 1976
BsgI GTGCAG 2 cut(s) 598, 1000
BshFI GGCC 4 cut(s) 548, 1238, 1863, 2174
BsiHKAI GWGCWC 3 cut(s) 66, 1879, 3276
BsiHKCI CYCGRG 1 cut(s) 743
BsiSI CCGG 3 cut(s) 281, 3694, 3896
BslFI GGGAC 1 cut(s) 3061
BslI CCNNNNNNNGG 8 cut(s) 377, 942, 1684, 2226, 2433, 2762, 2950, 3465
BsmAI GTCTC 5 cut(s) 1178, 1449, 2358, 2583, 3447
BsmBI CGTCTC 1 cut(s) 3447
BsmFI GGGAC 1 cut(s) 3061
BsmI GAATGC 2 cut(s) 2637, 2696
BsnI GGCC 4 cut(s) 548, 1238, 1863, 2174
Bso31I GGTCTC 1 cut(s) 1449
BsoBI CYCGRG 1 cut(s) 743
Bsp1286I GDGCHC 4 cut(s) 66, 1879, 3258, 3276
Bsp1407I TGTACA 2 cut(s) 2790, 3472
Bsp19I CCATGG 1 cut(s) 3258
BspACI CCGC 7 cut(s) 291, 803, 862, 946, 1864, 2230, 2280
BspANI GGCC 4 cut(s) 548, 1238, 1863, 2174
BspHI TCATGA 1 cut(s) 2488
BspLI GGNNCC 6 cut(s) 52, 547, 688, 795, 1530, 2754
BspMAI CTGCAG 6 cut(s) 844, 993, 1440, 1452, 2361, 2845
BspOI GCTAGC 1 cut(s) 108
BspQI GCTCTTC 1 cut(s) 3246
BspTNI GGTCTC 1 cut(s) 1449
BsrDI GCAATG 3 cut(s) 1571, 1906, 3715
BsrGI TGTACA 2 cut(s) 2790, 3472
BssECI CCNNGG 9 cut(s) 269, 651, 744, 1930, 2055, 2950, 3210, 3258, 3921
BssNI GRCGYC 2 cut(s) 2965, 3456
BssSI CACGAG 1 cut(s) 109
BssT1I CCWWGG 3 cut(s) 3210, 3258, 3921
Bst2BI CACGAG 1 cut(s) 109
Bst6I CTCTTC 3 cut(s) 190, 2979, 3246
BstACI GRCGYC 2 cut(s) 2965, 3456
BstAPI GCANNNNNTGC 1 cut(s) 2079
BstAUI TGTACA 2 cut(s) 2790, 3472
BstC8I GCNNGC 7 cut(s) 106, 528, 1624, 2189, 2247, 2303, 3893
BstDSI CCRYGG 1 cut(s) 3258
BstEII GGTNACC 2 cut(s) 1583, 1613
BstENI CCTNNNNNAGG 2 cut(s) 375, 2760
BstHHI GCGC 1 cut(s) 1469
BstMAI GTCTC 5 cut(s) 1178, 1449, 2358, 2583, 3447
BstMWI GCNNNNNNNGC 7 cut(s) 629, 2079, 2204, 2444, 2476, 2684, 3506
BstNSI RCATGY 2 cut(s) 1685, 3198
BstPI GGTNACC 2 cut(s) 1583, 1613
BstSLI GKGCMC 1 cut(s) 3276
BstV1I GCAGC 5 cut(s) 535, 826, 975, 2388, 3013
BstV2I GAAGAC 2 cut(s) 2564, 3090
BstX2I RGATCY 8 cut(s) 25, 50, 287, 758, 793, 1039, 1126, 2752
BstXI CCANNNNNNTGG 1 cut(s) 676
BstYI RGATCY 8 cut(s) 25, 50, 287, 758, 793, 1039, 1126, 2752
BsuRI GGCC 4 cut(s) 548, 1238, 1863, 2174
BtgI CCRYGG 1 cut(s) 3258
BtsI GCAGTG 3 cut(s) 2477, 2838, 3772
BtsIMutI CAGTG 9 cut(s) 64, 199, 458, 1585, 2477, 2678, 2838, 3549, 3772
Cac8I GCNNGC 7 cut(s) 106, 528, 1624, 2189, 2247, 2303, 3893
CaiI CAGNNNCTG 2 cut(s) 1340, 2102
CciI TCATGA 1 cut(s) 2488
CfoI GCGC 1 cut(s) 1469
Cfr13I GGNCC 4 cut(s) 266, 546, 1014, 3392
CseI GACGC 2 cut(s) 2973, 3464
CsiI ACCWGGT 1 cut(s) 370
Csp6I GTAC 9 cut(s) 435, 1453, 2090, 2522, 2791, 3336, 3402, 3473, 3828
CviQI GTAC 9 cut(s) 435, 1453, 2090, 2522, 2791, 3336, 3402, 3473, 3828
DraI TTTAAA 4 cut(s) 1741, 2148, 2461, 3849
DrdI GACNNNNNNGTC 1 cut(s) 2136
DriI GACNNNNNGTC 1 cut(s) 3641
DseDI GACNNNNNNGTC 1 cut(s) 2136
Eam1104I CTCTTC 3 cut(s) 190, 2979, 3246
Eam1105I GACNNNNNGTC 1 cut(s) 3641
EarI CTCTTC 3 cut(s) 190, 2979, 3246
EciI GGCGGA 2 cut(s) 877, 2245
Ecl136II GAGCTC 1 cut(s) 1877
Eco130I CCWWGG 3 cut(s) 3210, 3258, 3921
Eco147I AGGCCT 1 cut(s) 2174
Eco24I GRGCYC 2 cut(s) 1879, 3258
Eco31I GGTCTC 1 cut(s) 1449
Eco32I GATATC 2 cut(s) 2871, 2997
Eco47I GGWCC 3 cut(s) 266, 1014, 3392
Eco53kI GAGCTC 1 cut(s) 1877
Eco57I CTGAAG 6 cut(s) 2391, 2558, 3267, 3330, 3777, 3858
Eco88I CYCGRG 1 cut(s) 743
Eco91I GGTNACC 2 cut(s) 1583, 1613
EcoICRI GAGCTC 1 cut(s) 1877
EcoNI CCTNNNNNAGG 2 cut(s) 375, 2760
EcoO65I GGTNACC 2 cut(s) 1583, 1613
EcoRV GATATC 2 cut(s) 2871, 2997
EcoT14I CCWWGG 3 cut(s) 3210, 3258, 3921
EcoT22I ATGCAT 2 cut(s) 1571, 2639
EcoT38I GRGCYC 2 cut(s) 1879, 3258
ErhI CCWWGG 3 cut(s) 3210, 3258, 3921
Esp3I CGTCTC 1 cut(s) 3447
FalI AAGNNNNNCTT 4 cut(s) 1525, 1557, 3086, 3118
FaqI GGGAC 1 cut(s) 3061
FbaI TGATCA 1 cut(s) 3958
Fnu4HI GCNGC 6 cut(s) 524, 840, 989, 1864, 2377, 3027
FriOI GRGCYC 2 cut(s) 1879, 3258
Fsp4HI GCNGC 6 cut(s) 524, 840, 989, 1864, 2377, 3027
FspI TGCGCA 1 cut(s) 1468
GlaI GCGC 1 cut(s) 1468
GluI GCNGC 6 cut(s) 524, 840, 989, 1864, 2377, 3027
GsaI CCCAGC 4 cut(s) 1403, 1427, 1681, 1980
GsuI CTGGAG 3 cut(s) 153, 794, 1292
HaeIII GGCC 4 cut(s) 548, 1238, 1863, 2174
HapII CCGG 3 cut(s) 281, 3694, 3896
HgaI GACGC 2 cut(s) 2973, 3464
HhaI GCGC 1 cut(s) 1469
Hin1I GRCGYC 2 cut(s) 2965, 3456
Hin6I GCGC 1 cut(s) 1467
HinP1I GCGC 1 cut(s) 1467
HindIII AAGCTT 4 cut(s) 939, 2734, 3014, 3100
HpaII CCGG 3 cut(s) 281, 3694, 3896
HphI GGTGA 8 cut(s) 107, 569, 633, 968, 1625, 1703, 2303, 3824
Hpy166II GTNNAC 5 cut(s) 959, 2563, 3274, 3613, 3770
Hpy8I GTNNAC 5 cut(s) 959, 2563, 3274, 3613, 3770
Hpy99I CGWCG 2 cut(s) 2949, 2967
HpyCH4IV ACGT 1 cut(s) 2520
HpyF10VI GCNNNNNNNGC 7 cut(s) 629, 2079, 2204, 2444, 2476, 2684, 3506
HpySE526I ACGT 1 cut(s) 2520
Hsp92I GRCGYC 2 cut(s) 2965, 3456
HspAI GCGC 1 cut(s) 1467
Ksp22I TGATCA 1 cut(s) 3958
LguI GCTCTTC 1 cut(s) 3246
LmnI GCTCC 4 cut(s) 1297, 1541, 2362, 3838
Lsp1109I GCAGC 5 cut(s) 535, 826, 975, 2388, 3013
LweI GCATC 8 cut(s) 991, 1956, 1963, 2624, 2888, 2904, 2979, 3616
MabI ACCWGGT 1 cut(s) 370
MaeII ACGT 1 cut(s) 2520
MfeI CAATTG 1 cut(s) 204
MflI RGATCY 8 cut(s) 25, 50, 287, 758, 793, 1039, 1126, 2752
MhlI GDGCHC 4 cut(s) 66, 1879, 3258, 3276
MlyI GAGTC 7 cut(s) 164, 437, 554, 776, 899, 1715, 2227
MmeI TCCRAC 2 cut(s) 732, 2384
Mph1103I ATGCAT 2 cut(s) 1571, 2639
MroXI GAANNNNTTC 1 cut(s) 2736
MslI CAYNNNNRTG 5 cut(s) 36, 1765, 2771, 2888, 3279
MspA1I CMGCKG 2 cut(s) 2207, 2379
MspI CCGG 3 cut(s) 281, 3694, 3896
MunI CAATTG 1 cut(s) 204
Mva1269I GAATGC 2 cut(s) 2637, 2696
MwoI GCNNNNNNNGC 7 cut(s) 629, 2079, 2204, 2444, 2476, 2684, 3506
NciI CCSGG 1 cut(s) 281
NcoI CCATGG 1 cut(s) 3258
NheI GCTAGC 1 cut(s) 104
NlaIV GGNNCC 6 cut(s) 52, 547, 688, 795, 1530, 2754
NmuCI GTSAC 5 cut(s) 95, 557, 694, 926, 1613
NsbI TGCGCA 1 cut(s) 1468
NsiI ATGCAT 2 cut(s) 1571, 2639
NspI RCATGY 2 cut(s) 1685, 3198
PagI TCATGA 1 cut(s) 2488
PceI AGGCCT 1 cut(s) 2174
PciI ACATGT 1 cut(s) 3194
PciSI GCTCTTC 1 cut(s) 3246
PctI GAATGC 2 cut(s) 2637, 2696
PdmI GAANNNNTTC 1 cut(s) 2736
PflMI CCANNNNNTGG 2 cut(s) 942, 1684
PfoI TCCNGGA 5 cut(s) 279, 2219, 3130, 3187, 3654
PkrI GCNGC 6 cut(s) 525, 841, 990, 1865, 2378, 3028
PleI GAGTC 7 cut(s) 163, 437, 554, 776, 898, 1714, 2227
PpsI GAGTC 7 cut(s) 163, 437, 554, 776, 898, 1714, 2227
PscI ACATGT 1 cut(s) 3194
PshBI ATTAAT 3 cut(s) 1023, 1215, 2595
PsiI TTATAA 1 cut(s) 234
Psp124BI GAGCTC 1 cut(s) 1879
PspEI GGTNACC 2 cut(s) 1583, 1613
PspFI CCCAGC 4 cut(s) 1399, 1423, 1677, 1976
PspN4I GGNNCC 6 cut(s) 52, 547, 688, 795, 1530, 2754
PspPI GGNCC 4 cut(s) 266, 546, 1014, 3392
PsrI GAACNNNNNNTAC 4 cut(s) 1938, 1970, 3184, 3216
PstI CTGCAG 6 cut(s) 844, 993, 1440, 1452, 2361, 2845
PstNI CAGNNNCTG 2 cut(s) 1340, 2102
PsuI RGATCY 8 cut(s) 25, 50, 287, 758, 793, 1039, 1126, 2752
PvuII CAGCTG 2 cut(s) 2207, 2379
RsaI GTAC 9 cut(s) 436, 1454, 2091, 2523, 2792, 3337, 3403, 3474, 3829
RsaNI GTAC 9 cut(s) 435, 1453, 2090, 2522, 2791, 3336, 3402, 3473, 3828
RseI CAYNNNNRTG 5 cut(s) 36, 1765, 2771, 2888, 3279
SacI GAGCTC 1 cut(s) 1879
SapI GCTCTTC 1 cut(s) 3246
SatI GCNGC 6 cut(s) 524, 840, 989, 1864, 2377, 3027
Sau96I GGNCC 4 cut(s) 266, 546, 1014, 3392
ScaI AGTACT 2 cut(s) 2091, 3829
SchI GAGTC 7 cut(s) 164, 437, 554, 776, 899, 1715, 2227
SduI GDGCHC 4 cut(s) 66, 1879, 3258, 3276
SexAI ACCWGGT 1 cut(s) 370
SfaNI GCATC 8 cut(s) 991, 1956, 1963, 2624, 2888, 2904, 2979, 3616
SinI GGWCC 3 cut(s) 266, 1014, 3392
SmiI ATTTAAAT 1 cut(s) 2461
SmiMI CAYNNNNRTG 5 cut(s) 36, 1765, 2771, 2888, 3279
SmlI CTYRAG 2 cut(s) 2235, 3146
SmoI CTYRAG 2 cut(s) 2235, 3146
SseBI AGGCCT 1 cut(s) 2174
SsiI CCGC 7 cut(s) 291, 803, 862, 946, 1864, 2230, 2280
SspI AATATT 1 cut(s) 1555
SstI GAGCTC 1 cut(s) 1879
StuI AGGCCT 1 cut(s) 2174
StyI CCWWGG 3 cut(s) 3210, 3258, 3921
SwaI ATTTAAAT 1 cut(s) 2461
TaiI ACGT 1 cut(s) 2523
TaqI TCGA 8 cut(s) 477, 485, 1608, 1840, 2607, 2938, 3645, 3699
TatI WGTACW 4 cut(s) 2089, 2790, 3472, 3827
TauI GCSGC 1 cut(s) 1866
TscAI CASTG 9 cut(s) 71, 199, 465, 1585, 2477, 2685, 2845, 3549, 3772
TseFI GTSAC 5 cut(s) 95, 557, 694, 926, 1613
TseI GCWGC 5 cut(s) 523, 839, 988, 2376, 3026
Tsp45I GTSAC 5 cut(s) 95, 557, 694, 926, 1613
TspGWI ACGGA 1 cut(s) 555
TspRI CASTG 9 cut(s) 71, 199, 465, 1585, 2477, 2685, 2845, 3549, 3772
Van91I CCANNNNNTGG 2 cut(s) 942, 1684
VneI GTGCAC 1 cut(s) 3272
VpaK11BI GGWCC 3 cut(s) 266, 1014, 3392
VspI ATTAAT 3 cut(s) 1023, 1215, 2595
XagI CCTNNNNNAGG 2 cut(s) 375, 2760
XapI RAATTY 6 cut(s) 258, 1060, 2821, 3323, 3649, 3659
XbaI TCTAGA 4 cut(s) 251, 1763, 1850, 1871
XceI RCATGY 2 cut(s) 1685, 3198
XcmI CCANNNNNNNNNTGG 3 cut(s) 1685, 2521, 3037
XmnI GAANNNNTTC 1 cut(s) 2736
ZrmI AGTACT 2 cut(s) 2091, 3829
Zsp2I ATGCAT 2 cut(s) 1571, 2639
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.