Rorug05G0219100
NAC Family

(NAC) domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
22549900 .. 22553618
3719 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0219100.1

Sequence Viewer

Length: 1347 bp
ATGGCATTGCCTCGCTCATTTCTGTTGGGCGGCTCGTCTCCCTTTATATTATGTAGCAGACTCCATATAACCACCCCTACAACAATCCTTCTCCCTTCTCTCACTACCAGACCCATTCCTTCACTCTCTTTCTCTCTCTCCTCCACCACCGCCATGGCTTCCGCTTCTCCCGCCAAGAAGGTTCTGGTTCCGATTGCGAATGGCTCGGAGCAGATGGAGGCGGTGATCGCCGTCGATGTTCTGCGCCGAGCCGGAGCTGATGTCACTTTGGCTTCTGTGGAGAAGCAGCTGAGGGTTGAGGCGTGTCATGGGGTTAAGATCATCGCTGATGCTTTGGTTTCGGACTGTGGCCAGACCTCCTTCGATCTCATTACTCTACCTGGAGGGATGCCAGGTGCTACCACTCTTAAAAACAGTGAGGTCCTGGAAAGTCTGGTGAAAAAGCAAGCTGCCGATGGGAAGCTCTATGCTGCAATCTGTGCTGCACCTGCAGTGGCACTTGGGTCTTGGGGTGTGCTGAAGGGATTGAAAGCAACTTGCCATCCTTTAGTAATGGATCAATTAGCAGCATCTGGTGCGACTGCTGTTGAATCAAGAGTGCAGCTGGATGGCAAAGCTGTGACAAGTCGTGGACCTGGTACCACCATAGAGTTTGCTGTTGCACTTGTTGAGCAATTGTATGGGAAAGGGAAAGCTGATGAAGTTTCTGGTCCCCTGGTTATGCGTTCCAACCATGGGGATGAATATATCATAACTGAGCAAAACCCAACAAAGTGGACTTTCACTGATTCCCCAAAGATTCTTGTACCGATAGCTAATGGTACAGAGGAAATGGAAGCTATAATGATCATTGATATTCTACGAGAAGCCAAAGCAACTGTTGTGGTGGCCTCTGTAGAAGATAAGCTAGACATTATTGCTTCTCGCAAAGTTAAGCTGGAAGCAGATGTGCTCCTGGATGAAGCGGCCAAACTTTCGTATGACCTAATAGTTTTACCTGGTGGACTTGGCGGTGCTCAAGCTTTTGCAAAATCAGAAACACTTGTGAATTTGTTGAAAAAGCAGAGGGAATCAAATAAGCCTTATGGAGCTATATGTGCTTCACCAGCTTTAGTCTTTGAACCCCATGGCTTACTCAAGGGAAAAAAGGCCACAGCTTTCCCAGCAATGTGCGACAAGCTGTCAGATAAGAGTGAAATTGAAAATAGGGTATTGGTTGATGGTAACCTCATCACCAGCAGGGGGCCAGGAACTTCCATGGAGTTTGCTCTAGGAATTGTTGAGAAGTTTTTTGGCCGCGAAAAAGCAATAGAGCTTGCAAAATTTATGGTTTTTGTTCGTCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

448

Amino Acids

47.35

Weight (kDa)

6.97

Isoelectric Point (pI)

38.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DJ-1_PfpI PF01965 59 - 225 5.5e-47 DJ-1/PfpI family
DJ-1_PfpI PF01965 266 - 428 4.5e-42 DJ-1/PfpI family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000636)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 496
Acc36I ACCTGC 1 cut(s) 496
Acc65I GGTACC 1 cut(s) 638
AccB1I GGYRCC 1 cut(s) 638
AccII CGCG 1 cut(s) 1299
AciI CCGC 8 cut(s) 30, 150, 162, 171, 221, 965, 1011, 1297
AclWI GGATC 1 cut(s) 564
AcoI YGGCCR 3 cut(s) 349, 966, 1294
AcsI RAATTY 2 cut(s) 1048, 1322
AcuI CTGAAG 1 cut(s) 539
AfaI GTAC 3 cut(s) 640, 807, 823
AfiI CCNNNNNNNGG 2 cut(s) 735, 1242
AgsI TTSAA 5 cut(s) 529, 590, 1057, 1121, 1202
AhdI GACNNNNNGTC 1 cut(s) 1180
AjnI CCWGG 8 cut(s) 379, 391, 423, 634, 714, 954, 997, 1246
Alw21I GWGCWC 2 cut(s) 954, 1018
Alw26I GTCTC 1 cut(s) 42
AlwI GGATC 1 cut(s) 564
AlwNI CAGNNNCTG 1 cut(s) 572
AoxI GGCC 6 cut(s) 349, 888, 966, 1149, 1244, 1294
ApeKI GCWGC 6 cut(s) 286, 449, 470, 482, 566, 601
ApoI RAATTY 2 cut(s) 1048, 1322
Asp718I GGTACC 1 cut(s) 638
AspLEI GCGC 1 cut(s) 246
AspS9I GGNCC 4 cut(s) 421, 632, 710, 1244
AsuHPI GGTGA 4 cut(s) 235, 448, 1095, 1225
AvaII GGWCC 3 cut(s) 421, 632, 710
BalI TGGCCA 1 cut(s) 351
BanI GGYRCC 1 cut(s) 638
Bbv12I GWGCWC 2 cut(s) 954, 1018
BbvCI CCTCAGC 1 cut(s) 290
BbvI GCAGC 6 cut(s) 298, 436, 457, 469, 578, 613
BccI CCATC 5 cut(s) 208, 449, 549, 602, 1214
BceAI ACGGC 1 cut(s) 215
BciT130I CCWGG 8 cut(s) 381, 393, 425, 636, 716, 956, 999, 1248
BclI TGATCA 1 cut(s) 846
BcoDI GTCTC 1 cut(s) 42
BfaI CTAG 2 cut(s) 908, 1271
BfmI CTRYAG 2 cut(s) 489, 894
BfuAI ACCTGC 1 cut(s) 496
BisI GCNGC 9 cut(s) 31, 287, 450, 471, 483, 567, 602, 966, 1297
BlsI GCNGC 9 cut(s) 32, 288, 451, 472, 484, 568, 603, 967, 1298
Bme1390I CCNGG 8 cut(s) 381, 393, 425, 636, 716, 956, 999, 1248
Bme18I GGWCC 3 cut(s) 421, 632, 710
BmeRI GACNNNNNGTC 1 cut(s) 1180
BmgT120I GGNCC 4 cut(s) 421, 632, 710, 1244
BmiI GGNNCC 4 cut(s) 189, 640, 712, 1245
BmrFI CCNGG 8 cut(s) 381, 393, 425, 636, 716, 956, 999, 1248
BmsI GCATC 3 cut(s) 319, 378, 578
BpmI CTGGAG 1 cut(s) 402
Bpu10I CCTNAGC 1 cut(s) 290
BpuEI CTTGAG 2 cut(s) 1002, 1121
BsaJI CCNNGG 5 cut(s) 153, 714, 733, 1126, 1257
BsaXI ACNNNNNCTCC 2 cut(s) 246, 276
Bsc4I CCNNNNNNNGG 2 cut(s) 735, 1242
Bse3DI GCAATG 2 cut(s) 5, 1173
BseBI CCWGG 8 cut(s) 381, 393, 425, 636, 716, 956, 999, 1248
BseDI CCNNGG 5 cut(s) 153, 714, 733, 1126, 1257
BseGI GGATG 5 cut(s) 393, 541, 613, 745, 964
BseLI CCNNNNNNNGG 2 cut(s) 735, 1242
BseMI GCAATG 2 cut(s) 5, 1173
BseMII CTCAG 2 cut(s) 281, 747
BseRI GAGGAG 1 cut(s) 130
BseXI GCAGC 6 cut(s) 298, 436, 457, 469, 578, 613
BseYI CCCAGC 1 cut(s) 1162
BsgI GTGCAG 2 cut(s) 468, 620
Bsh1236I CGCG 1 cut(s) 1299
BshFI GGCC 6 cut(s) 351, 890, 968, 1151, 1246, 1296
BshNI GGYRCC 1 cut(s) 638
BsiHKAI GWGCWC 2 cut(s) 954, 1018
BsiSI CCGG 1 cut(s) 252
BslFI GGGAC 1 cut(s) 696
BslI CCNNNNNNNGG 2 cut(s) 735, 1242
BsmAI GTCTC 1 cut(s) 42
BsmBI CGTCTC 1 cut(s) 42
BsmFI GGGAC 1 cut(s) 696
BsnI GGCC 6 cut(s) 351, 890, 968, 1151, 1246, 1296
Bsp1286I GDGCHC 2 cut(s) 954, 1018
Bsp143I GATC 5 cut(s) 225, 318, 364, 556, 846
Bsp19I CCATGG 4 cut(s) 153, 733, 1126, 1257
BspACI CCGC 8 cut(s) 30, 150, 162, 171, 221, 965, 1011, 1297
BspANI GGCC 6 cut(s) 351, 890, 968, 1151, 1246, 1296
BspCNI CTCAG 2 cut(s) 282, 748
BspFNI CGCG 1 cut(s) 1299
BspLI GGNNCC 4 cut(s) 189, 640, 712, 1245
BspMAI CTGCAG 1 cut(s) 493
BspMI ACCTGC 1 cut(s) 496
BspPI GGATC 1 cut(s) 564
BspT107I GGYRCC 1 cut(s) 638
BsrDI GCAATG 2 cut(s) 5, 1173
BssECI CCNNGG 5 cut(s) 153, 714, 733, 1126, 1257
BssMI GATC 5 cut(s) 225, 318, 364, 556, 846
BssT1I CCWWGG 4 cut(s) 153, 733, 1126, 1257
Bst2UI CCWGG 8 cut(s) 381, 393, 425, 636, 716, 956, 999, 1248
Bst4CI ACNGT 3 cut(s) 347, 416, 880
BstAPI GCANNNNNTGC 2 cut(s) 479, 575
BstC8I GCNNGC 2 cut(s) 447, 1317
BstDEI CTNAG 2 cut(s) 290, 756
BstDSI CCRYGG 4 cut(s) 153, 733, 1126, 1257
BstEII GGTNACC 1 cut(s) 1223
BstF5I GGATG 5 cut(s) 393, 541, 613, 745, 964
BstFNI CGCG 1 cut(s) 1299
BstHHI GCGC 1 cut(s) 246
BstKTI GATC 5 cut(s) 228, 321, 367, 559, 849
BstMAI GTCTC 1 cut(s) 42
BstMBI GATC 5 cut(s) 225, 318, 364, 556, 846
BstMWI GCNNNNNNNGC 8 cut(s) 170, 227, 479, 488, 575, 1097, 1106, 1163
BstNI CCWGG 8 cut(s) 381, 393, 425, 636, 716, 956, 999, 1248
BstPI GGTNACC 1 cut(s) 1223
BstSCI CCNGG 8 cut(s) 379, 391, 423, 634, 714, 954, 997, 1246
BstSFI CTRYAG 2 cut(s) 489, 894
BstUI CGCG 1 cut(s) 1299
BstV1I GCAGC 6 cut(s) 298, 436, 457, 469, 578, 613
BstXI CCANNNNNNTGG 2 cut(s) 154, 774
BsuRI GGCC 6 cut(s) 351, 890, 968, 1151, 1246, 1296
BtgI CCRYGG 4 cut(s) 153, 733, 1126, 1257
BtgZI GCGATG 1 cut(s) 307
BtsCI GGATG 5 cut(s) 393, 541, 613, 745, 964
BtsI GCAGTG 1 cut(s) 498
BtsIMutI CAGTG 3 cut(s) 421, 498, 783
BveI ACCTGC 1 cut(s) 496
Cac8I GCNNGC 2 cut(s) 447, 1317
CaiI CAGNNNCTG 1 cut(s) 572
CfoI GCGC 1 cut(s) 246
Cfr13I GGNCC 4 cut(s) 421, 632, 710, 1244
CsiI ACCWGGT 2 cut(s) 634, 997
Csp6I GTAC 3 cut(s) 639, 806, 822
CspCI CAANNNNNGTGG 2 cut(s) 864, 899
CviAII CATG 5 cut(s) 154, 308, 734, 1127, 1258
CviQI GTAC 3 cut(s) 639, 806, 822
DdeI CTNAG 2 cut(s) 290, 756
DpnI GATC 5 cut(s) 227, 320, 366, 558, 848
DpnII GATC 5 cut(s) 225, 318, 364, 556, 846
DriI GACNNNNNGTC 1 cut(s) 1180
EaeI YGGCCR 3 cut(s) 349, 966, 1294
Eam1105I GACNNNNNGTC 1 cut(s) 1180
Eco130I CCWWGG 4 cut(s) 153, 733, 1126, 1257
Eco47I GGWCC 3 cut(s) 421, 632, 710
Eco57I CTGAAG 1 cut(s) 539
Eco91I GGTNACC 1 cut(s) 1223
EcoO109I RGGNCCY 1 cut(s) 421
EcoO65I GGTNACC 1 cut(s) 1223
EcoRII CCWGG 8 cut(s) 379, 391, 423, 634, 714, 954, 997, 1246
EcoT14I CCWWGG 4 cut(s) 153, 733, 1126, 1257
ErhI CCWWGG 4 cut(s) 153, 733, 1126, 1257
Esp3I CGTCTC 1 cut(s) 42
FaeI CATG 5 cut(s) 157, 311, 737, 1130, 1261
FaqI GGGAC 1 cut(s) 696
FatI CATG 5 cut(s) 153, 307, 733, 1126, 1257
FauI CCCGC 1 cut(s) 178
FbaI TGATCA 1 cut(s) 846
Fnu4HI GCNGC 9 cut(s) 31, 287, 450, 471, 483, 567, 602, 966, 1297
FokI GGATG 5 cut(s) 400, 528, 620, 752, 971
Fsp4HI GCNGC 9 cut(s) 31, 287, 450, 471, 483, 567, 602, 966, 1297
FspBI CTAG 2 cut(s) 908, 1271
GlaI GCGC 1 cut(s) 245
GluI GCNGC 9 cut(s) 31, 287, 450, 471, 483, 567, 602, 966, 1297
GsaI CCCAGC 1 cut(s) 1166
GsuI CTGGAG 1 cut(s) 402
HaeIII GGCC 6 cut(s) 351, 890, 968, 1151, 1246, 1296
HapII CCGG 1 cut(s) 252
HhaI GCGC 1 cut(s) 246
Hin1II CATG 5 cut(s) 157, 311, 737, 1130, 1261
Hin6I GCGC 1 cut(s) 244
HinP1I GCGC 1 cut(s) 244
HindIII AAGCTT 1 cut(s) 1020
HinfI GANTC 5 cut(s) 60, 590, 788, 799, 1070
HpaII CCGG 1 cut(s) 252
HphI GGTGA 4 cut(s) 235, 448, 1095, 1225
Hpy166II GTNNAC 3 cut(s) 632, 777, 1004
Hpy188I TCNGA 5 cut(s) 192, 208, 343, 1036, 1186
Hpy188III TCNNGA 1 cut(s) 594
Hpy8I GTNNAC 3 cut(s) 632, 777, 1004
Hpy99I CGWCG 1 cut(s) 236
HpyAV CCTTC 6 cut(s) 98, 105, 129, 172, 370, 514
HpyCH4III ACNGT 3 cut(s) 347, 416, 880
HpyCH4V TGCA 7 cut(s) 473, 485, 491, 601, 662, 1028, 1319
HpyF10VI GCNNNNNNNGC 8 cut(s) 170, 227, 479, 488, 575, 1097, 1106, 1163
HpyF3I CTNAG 2 cut(s) 290, 756
Hsp92II CATG 5 cut(s) 157, 311, 737, 1130, 1261
HspAI GCGC 1 cut(s) 244
KpnI GGTACC 1 cut(s) 642
Ksp22I TGATCA 1 cut(s) 846
Kzo9I GATC 5 cut(s) 225, 318, 364, 556, 846
LmnI GCTCC 4 cut(s) 208, 254, 957, 1088
Lsp1109I GCAGC 6 cut(s) 298, 436, 457, 469, 578, 613
LweI GCATC 3 cut(s) 319, 378, 578
MabI ACCWGGT 2 cut(s) 634, 997
MaeI CTAG 2 cut(s) 908, 1271
MaeIII GTNAC 3 cut(s) 262, 619, 1223
MalI GATC 5 cut(s) 227, 320, 366, 558, 848
MboI GATC 5 cut(s) 225, 318, 364, 556, 846
MboII GAAGA 1 cut(s) 911
MfeI CAATTG 1 cut(s) 674
MhlI GDGCHC 2 cut(s) 954, 1018
MlsI TGGCCA 1 cut(s) 351
MluCI AATT 6 cut(s) 560, 674, 1048, 1197, 1275, 1322
MluNI TGGCCA 1 cut(s) 351
MlyI GAGTC 1 cut(s) 54
MmeI TCCRAC 1 cut(s) 753
Mox20I TGGCCA 1 cut(s) 351
MscI TGGCCA 1 cut(s) 351
MseI TTAA 3 cut(s) 315, 408, 933
MslI CAYNNNNRTG 2 cut(s) 152, 738
Msp20I TGGCCA 1 cut(s) 351
MspA1I CMGCKG 2 cut(s) 289, 604
MspI CCGG 1 cut(s) 252
MspR9I CCNGG 8 cut(s) 381, 393, 425, 636, 716, 956, 999, 1248
MunI CAATTG 1 cut(s) 674
MvaI CCWGG 8 cut(s) 381, 393, 425, 636, 716, 956, 999, 1248
MvnI CGCG 1 cut(s) 1299
MwoI GCNNNNNNNGC 8 cut(s) 170, 227, 479, 488, 575, 1097, 1106, 1163
NcoI CCATGG 4 cut(s) 153, 733, 1126, 1257
NdeII GATC 5 cut(s) 225, 318, 364, 556, 846
NlaIII CATG 5 cut(s) 157, 311, 737, 1130, 1261
NlaIV GGNNCC 4 cut(s) 189, 640, 712, 1245
NmeAIII GCCGAG 1 cut(s) 272
NmuCI GTSAC 2 cut(s) 262, 619
PaqCI CACCTGC 1 cut(s) 496
PfeI GAWTC 4 cut(s) 590, 788, 799, 1070
PfoI TCCNGGA 2 cut(s) 423, 954
PkrI GCNGC 9 cut(s) 32, 288, 451, 472, 484, 568, 603, 967, 1298
PleI GAGTC 1 cut(s) 54
PpsI GAGTC 1 cut(s) 54
PpuMI RGGWCCY 1 cut(s) 421
Psp5II RGGWCCY 1 cut(s) 421
Psp6I CCWGG 8 cut(s) 379, 391, 423, 634, 714, 954, 997, 1246
PspEI GGTNACC 1 cut(s) 1223
PspFI CCCAGC 1 cut(s) 1162
PspGI CCWGG 8 cut(s) 379, 391, 423, 634, 714, 954, 997, 1246
PspN4I GGNNCC 4 cut(s) 189, 640, 712, 1245
PspPI GGNCC 4 cut(s) 421, 632, 710, 1244
PspPPI RGGWCCY 1 cut(s) 421
PstI CTGCAG 1 cut(s) 493
PstNI CAGNNNCTG 1 cut(s) 572
PvuII CAGCTG 2 cut(s) 289, 604
RsaI GTAC 3 cut(s) 640, 807, 823
RsaNI GTAC 3 cut(s) 639, 806, 822
RseI CAYNNNNRTG 2 cut(s) 152, 738
SaqAI TTAA 3 cut(s) 315, 408, 933
SatI GCNGC 9 cut(s) 31, 287, 450, 471, 483, 567, 602, 966, 1297
Sau3AI GATC 5 cut(s) 225, 318, 364, 556, 846
Sau96I GGNCC 4 cut(s) 421, 632, 710, 1244
SchI GAGTC 1 cut(s) 54
ScrFI CCNGG 8 cut(s) 381, 393, 425, 636, 716, 956, 999, 1248
SduI GDGCHC 2 cut(s) 954, 1018
SexAI ACCWGGT 2 cut(s) 634, 997
SfaNI GCATC 3 cut(s) 319, 378, 578
SfcI CTRYAG 2 cut(s) 489, 894
SinI GGWCC 3 cut(s) 421, 632, 710
SmiMI CAYNNNNRTG 2 cut(s) 152, 738
SmlI CTYRAG 2 cut(s) 1017, 1136
SmoI CTYRAG 2 cut(s) 1017, 1136
Sse9I AATT 6 cut(s) 560, 674, 1048, 1197, 1275, 1322
SsiI CCGC 8 cut(s) 30, 150, 162, 171, 221, 965, 1011, 1297
SspMI CTAG 2 cut(s) 908, 1271
StyD4I CCNGG 8 cut(s) 379, 391, 423, 634, 714, 954, 997, 1246
StyI CCWWGG 4 cut(s) 153, 733, 1126, 1257
TaaI ACNGT 3 cut(s) 347, 416, 880
TaqI TCGA 2 cut(s) 234, 363
TasI AATT 6 cut(s) 560, 674, 1048, 1197, 1275, 1322
TauI GCSGC 3 cut(s) 33, 968, 1299
TfiI GAWTC 4 cut(s) 590, 788, 799, 1070
Tru1I TTAA 3 cut(s) 315, 408, 933
Tru9I TTAA 3 cut(s) 315, 408, 933
TscAI CASTG 3 cut(s) 421, 498, 790
TseFI GTSAC 2 cut(s) 262, 619
TseI GCWGC 6 cut(s) 286, 449, 470, 482, 566, 601
Tsp45I GTSAC 2 cut(s) 262, 619
TspDTI ATGAA 3 cut(s) 714, 756, 975
TspRI CASTG 3 cut(s) 421, 498, 790
VpaK11BI GGWCC 3 cut(s) 421, 632, 710
XapI RAATTY 2 cut(s) 1048, 1322
XcmI CCANNNNNNNNNTGG 2 cut(s) 151, 181
XspI CTAG 2 cut(s) 908, 1271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.