Rh1AG157100

Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Forward (+)
29544906 .. 29556686
11781 bp
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UTR
Exon/CDS
Intron
Rh1AG157100.1

Sequence Viewer

Length: 303 bp
ATGTGCAGACAATTAATTGTCAGAGATGCTAAGGCTCTTTGTCCACAACTTGTCATTTTTCCTTATGATTTTGAAGTGTATGAGGAGGTAGCTGATCAGTTCCATGACATTCTAGTATTTTCAGGATTTGTGGAAGACTTGGGCCTTACTGTTGCAGCAAATGCTCAAAAATCACAAATTCAAAATGCAGGCAGCAGGCAGCAGCCAACAAGCAAAATATGTCAAAATACTAATGAAGCTGAAAATGATGAGGGAAAATATACAGTGGTAGCGGGGAGAGAGTATTGTTTTCGATCGAGTTAA

Protein Analysis

100

Amino Acids

11.26

Weight (kDa)

4.7

Isoelectric Point (pI)

32.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IMS PF00817 7 - 92 9.2e-06 impB/mucB/samB family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000565)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 272
AcsI RAATTY 1 cut(s) 177
AgsI TTSAA 2 cut(s) 74, 182
AluBI AGCT 2 cut(s) 92, 239
AluI AGCT 2 cut(s) 92, 239
AoxI GGCC 1 cut(s) 142
ApeKI GCWGC 4 cut(s) 155, 192, 199, 202
ApoI RAATTY 1 cut(s) 177
AseI ATTAAT 1 cut(s) 14
AspS9I GGNCC 1 cut(s) 142
BbsI GAAGAC 1 cut(s) 141
BbvI GCAGC 4 cut(s) 167, 204, 211, 214
BclI TGATCA 1 cut(s) 94
BfaI CTAG 1 cut(s) 113
BisI GCNGC 4 cut(s) 156, 193, 200, 203
BlsI GCNGC 4 cut(s) 157, 194, 201, 204
BmgT120I GGNCC 1 cut(s) 142
BmsI GCATC 1 cut(s) 16
BpiI GAAGAC 1 cut(s) 141
Bpu10I CCTNAGC 1 cut(s) 30
BseRI GAGGAG 1 cut(s) 98
BseXI GCAGC 4 cut(s) 167, 204, 211, 214
BsgI GTGCAG 1 cut(s) 25
Bsh1285I CGRYCG 1 cut(s) 296
BshFI GGCC 1 cut(s) 144
BsiEI CGRYCG 1 cut(s) 296
BsnI GGCC 1 cut(s) 144
Bsp143I GATC 2 cut(s) 94, 293
BspACI CCGC 1 cut(s) 272
BspANI GGCC 1 cut(s) 144
BssMI GATC 2 cut(s) 94, 293
Bst4CI ACNGT 2 cut(s) 151, 265
BstAPI GCANNNNNTGC 1 cut(s) 161
BstC8I GCNNGC 2 cut(s) 190, 197
BstDEI CTNAG 1 cut(s) 30
BstKTI GATC 2 cut(s) 97, 296
BstMBI GATC 2 cut(s) 94, 293
BstMCI CGRYCG 1 cut(s) 296
BstMWI GCNNNNNNNGC 1 cut(s) 161
BstV1I GCAGC 4 cut(s) 167, 204, 211, 214
BstV2I GAAGAC 1 cut(s) 141
BsuRI GGCC 1 cut(s) 144
BtsIMutI CAGTG 1 cut(s) 270
Cac8I GCNNGC 2 cut(s) 190, 197
Cfr13I GGNCC 1 cut(s) 142
CviAII CATG 1 cut(s) 104
CviJI RGCY 5 cut(s) 35, 92, 144, 205, 239
CviKI_1 RGCY 5 cut(s) 35, 92, 144, 205, 239
DdeI CTNAG 1 cut(s) 30
DpnI GATC 2 cut(s) 96, 295
DpnII GATC 2 cut(s) 94, 293
FaeI CATG 1 cut(s) 107
FaiI YATR 5 cut(s) 66, 81, 105, 220, 261
FatI CATG 1 cut(s) 103
FauI CCCGC 1 cut(s) 265
FbaI TGATCA 1 cut(s) 94
Fnu4HI GCNGC 4 cut(s) 156, 193, 200, 203
Fsp4HI GCNGC 4 cut(s) 156, 193, 200, 203
FspBI CTAG 1 cut(s) 113
GluI GCNGC 4 cut(s) 156, 193, 200, 203
HaeIII GGCC 1 cut(s) 144
Hin1II CATG 1 cut(s) 107
Hpy166II GTNNAC 1 cut(s) 44
Hpy188I TCNGA 1 cut(s) 23
Hpy188III TCNNGA 1 cut(s) 123
Hpy8I GTNNAC 1 cut(s) 44
HpyCH4III ACNGT 2 cut(s) 151, 265
HpyCH4V TGCA 3 cut(s) 6, 155, 188
HpyF10VI GCNNNNNNNGC 1 cut(s) 161
HpyF3I CTNAG 1 cut(s) 30
Hsp92II CATG 1 cut(s) 107
Ksp22I TGATCA 1 cut(s) 94
Kzo9I GATC 2 cut(s) 94, 293
LpnPI CCDG 3 cut(s) 108, 174, 181
Lsp1109I GCAGC 4 cut(s) 167, 204, 211, 214
LweI GCATC 1 cut(s) 16
MaeI CTAG 1 cut(s) 113
MalI GATC 2 cut(s) 96, 295
MboI GATC 2 cut(s) 94, 293
MboII GAAGA 1 cut(s) 146
MluCI AATT 3 cut(s) 11, 15, 177
MnlI CCTC 3 cut(s) 76, 79, 244
MseI TTAA 2 cut(s) 14, 301
MwoI GCNNNNNNNGC 1 cut(s) 161
NdeII GATC 2 cut(s) 94, 293
NlaIII CATG 1 cut(s) 107
PkrI GCNGC 4 cut(s) 157, 194, 201, 204
Ple19I CGATCG 1 cut(s) 296
PshBI ATTAAT 1 cut(s) 14
PspPI GGNCC 1 cut(s) 142
PvuI CGATCG 1 cut(s) 296
SaqAI TTAA 2 cut(s) 14, 301
SatI GCNGC 4 cut(s) 156, 193, 200, 203
Sau3AI GATC 2 cut(s) 94, 293
Sau96I GGNCC 1 cut(s) 142
SetI ASST 3 cut(s) 90, 94, 241
SfaNI GCATC 1 cut(s) 16
SgeI CNNG 9 cut(s) 62, 116, 125, 135, 151, 201, 208, 222, 285
Sse9I AATT 3 cut(s) 11, 15, 177
SsiI CCGC 1 cut(s) 272
SspMI CTAG 1 cut(s) 113
TaaI ACNGT 2 cut(s) 151, 265
TaqI TCGA 2 cut(s) 292, 296
TasI AATT 3 cut(s) 11, 15, 177
Tru1I TTAA 2 cut(s) 14, 301
Tru9I TTAA 2 cut(s) 14, 301
TscAI CASTG 1 cut(s) 270
TseI GCWGC 4 cut(s) 155, 192, 199, 202
TspDTI ATGAA 1 cut(s) 249
TspRI CASTG 1 cut(s) 270
VspI ATTAAT 1 cut(s) 14
XapI RAATTY 1 cut(s) 177
XspI CTAG 1 cut(s) 113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.