Rh1AG161600

Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Reverse (-)
30815009 .. 30816240
1232 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG161600.1

Sequence Viewer

Length: 573 bp
ATGATTTGCCCAGTTTTCTTAGGTATACCAGGACAGGCGCAACTTTTACTTCCTAATTTTGTTCCTAAATATGCTGTAGGATTTTTTTTGTTCGTGGTCATCAGGCAACACCCTGAACTTAAGGATAGGCTTGCTGCTGTACGTCATTTTGATAATCCAAAGGACACTGCTGAAGTTTCCTCTGCAAACTACTCTGCTCAAGATTATGGAGTGAGGGCTGCGCTGTTTGTCAGAGATGCTAAGGCTCTTTGTCCACAACTTGTCATTTTTCCTTATGATTTTGAAGTGTATGAGGAGGTGCATGATTATTTATATGAACTTCCCATCAAGACGCTTCCAGGAATAGGACGCATTTTAAAGGAGAAATTGAAGAAGCGAAATGTTTTGATTTATGGACAGTTGCGTGCGATTCCTAGAGTGTCTTTATTGATGAATCTGATGATAAAAGGCCTTGTTCACATTAGTGACACTAAAGCCCTTTTAATTTCTCAGGGTGACCACCTAAGTCCTCTGCAGCTACATTACTCTTCCTCCGTATGCACTTGTAACACAGGTGAAGTATATCTGAACTGA

Protein Analysis

190

Amino Acids

21.45

Weight (kDa)

8.62

Isoelectric Point (pI)

33.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IMS PF00817 28 - 107 3.5e-15 impB/mucB/samB family
IMS_HHH PF11798 97 - 128 8.9e-07 IMS family HHH motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000565)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 25
AcuI CTGAAG 1 cut(s) 192
AfaI GTAC 1 cut(s) 141
AfiI CCNNNNNNNGG 1 cut(s) 344
AflII CTTAAG 1 cut(s) 119
AgsI TTSAA 2 cut(s) 284, 370
AjnI CCWGG 2 cut(s) 28, 337
AleI CACNNNNGTG 1 cut(s) 462
AluBI AGCT 1 cut(s) 517
AluI AGCT 1 cut(s) 517
AoxI GGCC 1 cut(s) 448
ApeKI GCWGC 3 cut(s) 134, 218, 514
AspLEI GCGC 2 cut(s) 40, 223
AsuHPI GGTGA 2 cut(s) 506, 566
BbvI GCAGC 3 cut(s) 121, 205, 526
BccI CCATC 1 cut(s) 332
BciT130I CCWGG 2 cut(s) 30, 339
BfaI CTAG 1 cut(s) 414
BfmI CTRYAG 2 cut(s) 75, 512
BfrI CTTAAG 1 cut(s) 119
BisI GCNGC 3 cut(s) 135, 219, 515
BlsI GCNGC 3 cut(s) 136, 220, 516
Bme1390I CCNGG 2 cut(s) 30, 339
BmrFI CCNGG 2 cut(s) 30, 339
BmrI ACTGGG 1 cut(s) 5
BmsI GCATC 1 cut(s) 226
BmuI ACTGGG 1 cut(s) 5
Bpu10I CCTNAGC 1 cut(s) 240
BpuEI CTTGAG 1 cut(s) 183
BsaXI ACNNNNNCTCC 2 cut(s) 515, 545
Bsc4I CCNNNNNNNGG 1 cut(s) 344
Bse1I ACTGG 1 cut(s) 11
BseBI CCWGG 2 cut(s) 30, 339
BseLI CCNNNNNNNGG 1 cut(s) 344
BseMII CTCAG 1 cut(s) 503
BseNI ACTGG 1 cut(s) 11
BseRI GAGGAG 1 cut(s) 308
BseXI GCAGC 3 cut(s) 121, 205, 526
BshFI GGCC 1 cut(s) 450
BslI CCNNNNNNNGG 1 cut(s) 344
BsnI GGCC 1 cut(s) 450
BspANI GGCC 1 cut(s) 450
BspCNI CTCAG 1 cut(s) 502
BspMAI CTGCAG 1 cut(s) 516
BspTI CTTAAG 1 cut(s) 119
BsrI ACTGG 1 cut(s) 11
BssNAI GTATAC 1 cut(s) 26
Bst1107I GTATAC 1 cut(s) 26
Bst2UI CCWGG 2 cut(s) 30, 339
Bst4CI ACNGT 1 cut(s) 399
Bst6I CTCTTC 1 cut(s) 532
BstAFI CTTAAG 1 cut(s) 119
BstC8I GCNNGC 2 cut(s) 132, 405
BstDEI CTNAG 4 cut(s) 19, 240, 489, 503
BstEII GGTNACC 1 cut(s) 494
BstHHI GCGC 2 cut(s) 40, 223
BstNI CCWGG 2 cut(s) 30, 339
BstPI GGTNACC 1 cut(s) 494
BstSCI CCNGG 2 cut(s) 28, 337
BstSFI CTRYAG 2 cut(s) 75, 512
BstV1I GCAGC 3 cut(s) 121, 205, 526
BstZ17I GTATAC 1 cut(s) 26
BsuRI GGCC 1 cut(s) 450
BtsI GCAGTG 1 cut(s) 165
BtsIMutI CAGTG 1 cut(s) 165
Cac8I GCNNGC 2 cut(s) 132, 405
CfoI GCGC 2 cut(s) 40, 223
CseI GACGC 2 cut(s) 340, 357
Csp6I GTAC 1 cut(s) 140
CviAII CATG 1 cut(s) 302
CviJI RGCY 6 cut(s) 130, 218, 245, 450, 476, 517
CviKI_1 RGCY 6 cut(s) 130, 218, 245, 450, 476, 517
CviQI GTAC 1 cut(s) 140
DdeI CTNAG 4 cut(s) 19, 240, 489, 503
DraI TTTAAA 1 cut(s) 357
Eam1104I CTCTTC 1 cut(s) 532
EarI CTCTTC 1 cut(s) 532
Eco147I AGGCCT 1 cut(s) 450
Eco57I CTGAAG 1 cut(s) 192
Eco91I GGTNACC 1 cut(s) 494
EcoO65I GGTNACC 1 cut(s) 494
EcoRII CCWGG 2 cut(s) 28, 337
FaeI CATG 1 cut(s) 305
FatI CATG 1 cut(s) 301
FblI GTMKAC 1 cut(s) 25
Fnu4HI GCNGC 3 cut(s) 135, 219, 515
Fsp4HI GCNGC 3 cut(s) 135, 219, 515
FspBI CTAG 1 cut(s) 414
GlaI GCGC 2 cut(s) 39, 222
GluI GCNGC 3 cut(s) 135, 219, 515
HaeIII GGCC 1 cut(s) 450
HgaI GACGC 2 cut(s) 340, 357
HhaI GCGC 2 cut(s) 40, 223
Hin1II CATG 1 cut(s) 305
Hin6I GCGC 2 cut(s) 38, 221
HinP1I GCGC 2 cut(s) 38, 221
HinfI GANTC 2 cut(s) 409, 433
HphI GGTGA 2 cut(s) 506, 566
Hpy166II GTNNAC 3 cut(s) 26, 254, 457
Hpy188I TCNGA 3 cut(s) 233, 438, 567
Hpy188III TCNNGA 2 cut(s) 200, 328
Hpy8I GTNNAC 3 cut(s) 26, 254, 457
HpyCH4III ACNGT 1 cut(s) 399
HpyCH4IV ACGT 1 cut(s) 142
HpyCH4V TGCA 4 cut(s) 185, 301, 514, 540
HpyF3I CTNAG 4 cut(s) 19, 240, 489, 503
HpySE526I ACGT 1 cut(s) 142
Hsp92II CATG 1 cut(s) 305
HspAI GCGC 2 cut(s) 38, 221
Lsp1109I GCAGC 3 cut(s) 121, 205, 526
LweI GCATC 1 cut(s) 226
MaeI CTAG 1 cut(s) 414
MaeII ACGT 1 cut(s) 142
MaeIII GTNAC 3 cut(s) 464, 494, 545
MboII GAAGA 2 cut(s) 382, 519
MluCI AATT 3 cut(s) 55, 365, 483
MnlI CCTC 6 cut(s) 190, 207, 286, 289, 519, 541
MseI TTAA 3 cut(s) 120, 356, 482
MslI CAYNNNNRTG 1 cut(s) 462
MspCI CTTAAG 1 cut(s) 119
MspR9I CCNGG 2 cut(s) 30, 339
MvaI CCWGG 2 cut(s) 30, 339
NlaIII CATG 1 cut(s) 305
NmuCI GTSAC 2 cut(s) 464, 494
OliI CACNNNNGTG 1 cut(s) 462
PceI AGGCCT 1 cut(s) 450
PfeI GAWTC 2 cut(s) 409, 433
PfoI TCCNGGA 1 cut(s) 337
PkrI GCNGC 3 cut(s) 136, 220, 516
Psp6I CCWGG 2 cut(s) 28, 337
PspEI GGTNACC 1 cut(s) 494
PspGI CCWGG 2 cut(s) 28, 337
PstI CTGCAG 1 cut(s) 516
RsaI GTAC 1 cut(s) 141
RsaNI GTAC 1 cut(s) 140
RseI CAYNNNNRTG 1 cut(s) 462
SaqAI TTAA 3 cut(s) 120, 356, 482
SatI GCNGC 3 cut(s) 135, 219, 515
ScrFI CCNGG 2 cut(s) 30, 339
SetI ASST 6 cut(s) 25, 145, 300, 504, 519, 556
SfaNI GCATC 1 cut(s) 226
SfcI CTRYAG 2 cut(s) 75, 512
SmiMI CAYNNNNRTG 1 cut(s) 462
SmlI CTYRAG 2 cut(s) 119, 198
SmoI CTYRAG 2 cut(s) 119, 198
Sse9I AATT 3 cut(s) 55, 365, 483
SseBI AGGCCT 1 cut(s) 450
SspMI CTAG 1 cut(s) 414
StuI AGGCCT 1 cut(s) 450
StyD4I CCNGG 2 cut(s) 28, 337
TaaI ACNGT 1 cut(s) 399
TaiI ACGT 1 cut(s) 145
TasI AATT 3 cut(s) 55, 365, 483
TfiI GAWTC 2 cut(s) 409, 433
Tru1I TTAA 3 cut(s) 120, 356, 482
Tru9I TTAA 3 cut(s) 120, 356, 482
TscAI CASTG 1 cut(s) 172
TseFI GTSAC 2 cut(s) 464, 494
TseI GCWGC 3 cut(s) 134, 218, 514
Tsp45I GTSAC 2 cut(s) 464, 494
TspDTI ATGAA 2 cut(s) 330, 446
TspGWI ACGGA 1 cut(s) 523
TspRI CASTG 1 cut(s) 172
Vha464I CTTAAG 1 cut(s) 119
XmiI GTMKAC 1 cut(s) 25
XspI CTAG 1 cut(s) 414
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.