Rh5CG350700

Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
40443310 .. 40451003
7694 bp
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UTR
Exon/CDS
Intron
Rh5CG350700.1

Sequence Viewer

Length: 522 bp
ATGGTCTGTTTGGGAGTGAGGGCTGCGATGTTTGTTAGAGATGCTAAGGCTCTTTGTCCACACCTTGTCATTCTTCCTTATGATTTTAAAGCGTATGAGGAGGTAACTAATCGGTTCTATGACATTCTGCATAAGCACTGCAGAAAAGTACAAGCAGTAAGCTGTGACGAAGCATTTTTAGATGTCACATACTTGGAAGGGGTAGATATGGATATGTTAGCCTCAATTATAATACAAGAGATCTTTGAGACTACTGGATGCATTGCAAGTAGAAATATGCTCATGGCTCGCCTTACAACAAGAACTGCTAAACCAGACGGTCAATGCAACATTCCTCCCAAAAGGTTTTCTTCAACTTATGTACTGAGAATTTGGTGGGGAATGAAAAGAATGACTAAGATGATACCCAGACACTCATTTGAGCAGTTGAGCATAGTTAACATTCCGTTTTCCAGTGGAGGAAGAGAGCCTTATGCGTGGGACAAGAAGAGTCCAGTTTCTGTGATGGAGAAAGAAAAGTAA

Protein Analysis

173

Amino Acids

19.92

Weight (kDa)

8.9

Isoelectric Point (pI)

47.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IMS PF00817 4 - 100 6.6e-19 impB/mucB/samB family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000565)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 230
AcsI RAATTY 1 cut(s) 369
AfaI GTAC 2 cut(s) 150, 363
AgsI TTSAA 1 cut(s) 354
AluBI AGCT 1 cut(s) 162
AluI AGCT 1 cut(s) 162
Alw26I GTCTC 1 cut(s) 242
AlwNI CAGNNNCTG 1 cut(s) 500
ApeKI GCWGC 1 cut(s) 23
ApoI RAATTY 1 cut(s) 369
BbvI GCAGC 1 cut(s) 10
BccI CCATC 1 cut(s) 499
BcoDI GTCTC 1 cut(s) 242
BfmI CTRYAG 1 cut(s) 139
BglII AGATCT 1 cut(s) 240
BisI GCNGC 1 cut(s) 24
BlsI GCNGC 1 cut(s) 25
BmsI GCATC 2 cut(s) 31, 248
Bpu10I CCTNAGC 1 cut(s) 45
Bse1I ACTGG 3 cut(s) 259, 453, 494
Bse3DI GCAATG 1 cut(s) 261
BseGI GGATG 1 cut(s) 263
BseMI GCAATG 1 cut(s) 261
BseMII CTCAG 1 cut(s) 356
BseNI ACTGG 3 cut(s) 259, 453, 494
BseRI GAGGAG 1 cut(s) 113
BseXI GCAGC 1 cut(s) 10
BslFI GGGAC 1 cut(s) 494
BsmAI GTCTC 1 cut(s) 242
BsmFI GGGAC 1 cut(s) 494
Bsp143I GATC 1 cut(s) 240
BspCNI CTCAG 1 cut(s) 357
BspMAI CTGCAG 1 cut(s) 143
BsrDI GCAATG 1 cut(s) 261
BsrI ACTGG 3 cut(s) 259, 453, 494
BssMI GATC 1 cut(s) 240
Bst4CI ACNGT 1 cut(s) 320
Bst6I CTCTTC 2 cut(s) 457, 482
BstC8I GCNNGC 1 cut(s) 289
BstDEI CTNAG 3 cut(s) 45, 365, 396
BstF5I GGATG 1 cut(s) 263
BstKTI GATC 1 cut(s) 243
BstMAI GTCTC 1 cut(s) 242
BstMBI GATC 1 cut(s) 240
BstSFI CTRYAG 1 cut(s) 139
BstV1I GCAGC 1 cut(s) 10
BstX2I RGATCY 1 cut(s) 240
BstYI RGATCY 1 cut(s) 240
BtgZI GCGATG 1 cut(s) 41
BtsCI GGATG 1 cut(s) 263
BtsI GCAGTG 1 cut(s) 136
BtsIMutI CAGTG 2 cut(s) 136, 460
Cac8I GCNNGC 1 cut(s) 289
CaiI CAGNNNCTG 1 cut(s) 500
Csp6I GTAC 2 cut(s) 149, 362
CviAII CATG 1 cut(s) 283
CviJI RGCY 6 cut(s) 23, 50, 162, 221, 287, 469
CviKI_1 RGCY 6 cut(s) 23, 50, 162, 221, 287, 469
CviQI GTAC 2 cut(s) 149, 362
DdeI CTNAG 3 cut(s) 45, 365, 396
DpnI GATC 1 cut(s) 242
DpnII GATC 1 cut(s) 240
DraI TTTAAA 1 cut(s) 88
Eam1104I CTCTTC 2 cut(s) 457, 482
EarI CTCTTC 2 cut(s) 457, 482
EcoT22I ATGCAT 1 cut(s) 263
FaeI CATG 1 cut(s) 286
FalI AAGNNNNNCTT 4 cut(s) 334, 366, 454, 486
FaqI GGGAC 1 cut(s) 494
FatI CATG 1 cut(s) 282
Fnu4HI GCNGC 1 cut(s) 24
FokI GGATG 1 cut(s) 270
Fsp4HI GCNGC 1 cut(s) 24
GluI GCNGC 1 cut(s) 24
Hin1II CATG 1 cut(s) 286
HincII GTYRAC 1 cut(s) 439
HindII GTYRAC 1 cut(s) 439
HinfI GANTC 1 cut(s) 490
HpaI GTTAAC 1 cut(s) 439
Hpy166II GTNNAC 2 cut(s) 59, 439
Hpy8I GTNNAC 2 cut(s) 59, 439
HpyAV CCTTC 1 cut(s) 191
HpyCH4III ACNGT 1 cut(s) 320
HpyCH4V TGCA 5 cut(s) 130, 141, 261, 266, 327
HpyF3I CTNAG 3 cut(s) 45, 365, 396
Hsp92II CATG 1 cut(s) 286
KspAI GTTAAC 1 cut(s) 439
Kzo9I GATC 1 cut(s) 240
LpnPI CCDG 5 cut(s) 240, 327, 421, 466, 507
Lsp1109I GCAGC 1 cut(s) 10
LweI GCATC 2 cut(s) 31, 248
MaeIII GTNAC 3 cut(s) 103, 164, 184
MalI GATC 1 cut(s) 242
MboI GATC 1 cut(s) 240
MboII GAAGA 4 cut(s) 65, 342, 474, 499
MflI RGATCY 1 cut(s) 240
MluCI AATT 2 cut(s) 225, 369
MlyI GAGTC 1 cut(s) 499
MnlI CCTC 6 cut(s) 12, 91, 94, 232, 345, 452
Mph1103I ATGCAT 1 cut(s) 263
MseI TTAA 2 cut(s) 87, 438
NdeII GATC 1 cut(s) 240
NlaIII CATG 1 cut(s) 286
NmuCI GTSAC 2 cut(s) 164, 184
NsiI ATGCAT 1 cut(s) 263
PkrI GCNGC 1 cut(s) 25
PleI GAGTC 1 cut(s) 498
PpsI GAGTC 1 cut(s) 498
PsiI TTATAA 1 cut(s) 230
PstI CTGCAG 1 cut(s) 143
PstNI CAGNNNCTG 1 cut(s) 500
PsuI RGATCY 1 cut(s) 240
RsaI GTAC 2 cut(s) 150, 363
RsaNI GTAC 2 cut(s) 149, 362
SaqAI TTAA 2 cut(s) 87, 438
SatI GCNGC 1 cut(s) 24
Sau3AI GATC 1 cut(s) 240
SchI GAGTC 1 cut(s) 499
SetI ASST 4 cut(s) 66, 105, 164, 347
SfaNI GCATC 2 cut(s) 31, 248
SfcI CTRYAG 1 cut(s) 139
Sse9I AATT 2 cut(s) 225, 369
TaaI ACNGT 1 cut(s) 320
TasI AATT 2 cut(s) 225, 369
TatI WGTACW 2 cut(s) 148, 361
Tru1I TTAA 2 cut(s) 87, 438
Tru9I TTAA 2 cut(s) 87, 438
TscAI CASTG 2 cut(s) 143, 460
TseFI GTSAC 2 cut(s) 164, 184
TseI GCWGC 1 cut(s) 23
Tsp45I GTSAC 2 cut(s) 164, 184
TspDTI ATGAA 1 cut(s) 398
TspGWI ACGGA 1 cut(s) 435
TspRI CASTG 2 cut(s) 143, 460
XapI RAATTY 1 cut(s) 369
Zsp2I ATGCAT 1 cut(s) 263
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.