Rh7CG465100

Ketol-acid reductoisomerase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Reverse (-)
62181388 .. 62181996
609 bp
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UTR
Exon/CDS
Intron
Rh7CG465100.1

Sequence Viewer

Length: 345 bp
ATGAGTGAAGATTCTGCTTATAAAAATACTATTGAATGTGTTACTGGAATTGTGTCAAGAACCATATCAACTAAGGGCATGTTGGAAATATACAGCTCTTTGTCTGAAGCTGACAAGAAGGAGTTTGAGACTGCATATTGTGCCTCCTATTATCCTTGCATGGACATCCTCTATGAATGCTATGAGGATGTAGCAAGCGGTAGTGAGATCCGTAGCGTTGTTTTGGTTGGGCGGCGATTTTATGAGAAAGATGGTCTTCCTGCCTTCCCTATGGGAAAGATTGATCAGACGCGCATGTGGAAAGTTGGTGAGCGTGTCCGATCGACAGAATGCAGTGGATTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

114

Amino Acids

12.87

Weight (kDa)

4.89

Isoelectric Point (pI)

60.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KARI_C PF01450 1 - 108 9.2e-17 Ketol-acid reductoisomerase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000565)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 21
AccII CGCG 1 cut(s) 292
AciI CCGC 2 cut(s) 198, 232
AclWI GGATC 1 cut(s) 202
AcuI CTGAAG 1 cut(s) 126
AgsI TTSAA 1 cut(s) 35
AluBI AGCT 2 cut(s) 96, 110
AluI AGCT 2 cut(s) 96, 110
Alw26I GTCTC 1 cut(s) 122
AlwI GGATC 1 cut(s) 202
AspLEI GCGC 1 cut(s) 294
AsuHPI GGTGA 1 cut(s) 320
BbsI GAAGAC 1 cut(s) 248
BccI CCATC 1 cut(s) 245
BclI TGATCA 1 cut(s) 283
BcoDI GTCTC 1 cut(s) 122
BisI GCNGC 1 cut(s) 233
BlsI GCNGC 1 cut(s) 234
BpiI GAAGAC 1 cut(s) 248
Bse1I ACTGG 1 cut(s) 49
BseGI GGATG 2 cut(s) 165, 193
BseNI ACTGG 1 cut(s) 49
Bsh1236I CGCG 1 cut(s) 292
Bsh1285I CGRYCG 1 cut(s) 323
BsiEI CGRYCG 1 cut(s) 323
BsmAI GTCTC 1 cut(s) 122
BsmI GAATGC 2 cut(s) 182, 335
Bsp143I GATC 3 cut(s) 207, 283, 320
BspACI CCGC 2 cut(s) 198, 232
BspFNI CGCG 1 cut(s) 292
BspPI GGATC 1 cut(s) 202
BsrI ACTGG 1 cut(s) 49
BssMI GATC 3 cut(s) 207, 283, 320
BstAPI GCANNNNNTGC 1 cut(s) 140
BstC8I GCNNGC 1 cut(s) 196
BstDEI CTNAG 1 cut(s) 72
BstF5I GGATG 2 cut(s) 165, 193
BstFNI CGCG 1 cut(s) 292
BstHHI GCGC 1 cut(s) 294
BstKTI GATC 3 cut(s) 210, 286, 323
BstMAI GTCTC 1 cut(s) 122
BstMBI GATC 3 cut(s) 207, 283, 320
BstMCI CGRYCG 1 cut(s) 323
BstMWI GCNNNNNNNGC 1 cut(s) 140
BstNSI RCATGY 2 cut(s) 82, 298
BstUI CGCG 1 cut(s) 292
BstV2I GAAGAC 1 cut(s) 248
BstX2I RGATCY 1 cut(s) 207
BstYI RGATCY 1 cut(s) 207
BtsCI GGATG 2 cut(s) 165, 193
BtsI GCAGTG 1 cut(s) 340
BtsIMutI CAGTG 1 cut(s) 340
Cac8I GCNNGC 1 cut(s) 196
CfoI GCGC 1 cut(s) 294
CseI GACGC 1 cut(s) 298
CviAII CATG 3 cut(s) 79, 160, 295
CviJI RGCY 2 cut(s) 96, 110
CviKI_1 RGCY 2 cut(s) 96, 110
DdeI CTNAG 1 cut(s) 72
DpnI GATC 3 cut(s) 209, 285, 322
DpnII GATC 3 cut(s) 207, 283, 320
Eco57I CTGAAG 1 cut(s) 126
FaeI CATG 3 cut(s) 82, 163, 298
FalI AAGNNNNNCTT 2 cut(s) 240, 272
FatI CATG 3 cut(s) 78, 159, 294
FbaI TGATCA 1 cut(s) 283
Fnu4HI GCNGC 1 cut(s) 233
FokI GGATG 2 cut(s) 152, 200
Fsp4HI GCNGC 1 cut(s) 233
GlaI GCGC 1 cut(s) 293
GluI GCNGC 1 cut(s) 233
HgaI GACGC 1 cut(s) 298
HhaI GCGC 1 cut(s) 294
Hin1II CATG 3 cut(s) 82, 163, 298
Hin6I GCGC 1 cut(s) 292
HinP1I GCGC 1 cut(s) 292
HinfI GANTC 1 cut(s) 11
HphI GGTGA 1 cut(s) 320
Hpy188I TCNGA 3 cut(s) 106, 288, 320
Hpy188III TCNNGA 1 cut(s) 57
HpyAV CCTTC 2 cut(s) 112, 274
HpyCH4V TGCA 3 cut(s) 134, 159, 333
HpyF10VI GCNNNNNNNGC 1 cut(s) 140
HpyF3I CTNAG 1 cut(s) 72
Hsp92II CATG 3 cut(s) 82, 163, 298
HspAI GCGC 1 cut(s) 292
Ksp22I TGATCA 1 cut(s) 283
Kzo9I GATC 3 cut(s) 207, 283, 320
LpnPI CCDG 2 cut(s) 30, 273
MaeIII GTNAC 1 cut(s) 40
MalI GATC 3 cut(s) 209, 285, 322
MboI GATC 3 cut(s) 207, 283, 320
MboII GAAGA 2 cut(s) 20, 248
MflI RGATCY 1 cut(s) 207
MluCI AATT 1 cut(s) 48
MmeI TCCRAC 1 cut(s) 63
MnlI CCTC 3 cut(s) 154, 178, 179
Mva1269I GAATGC 2 cut(s) 182, 335
MvnI CGCG 1 cut(s) 292
MwoI GCNNNNNNNGC 1 cut(s) 140
NdeII GATC 3 cut(s) 207, 283, 320
NlaIII CATG 3 cut(s) 82, 163, 298
NspI RCATGY 2 cut(s) 82, 298
PctI GAATGC 2 cut(s) 182, 335
PfeI GAWTC 1 cut(s) 11
PkrI GCNGC 1 cut(s) 234
Ple19I CGATCG 1 cut(s) 323
PsiI TTATAA 1 cut(s) 21
PsuI RGATCY 1 cut(s) 207
PvuI CGATCG 1 cut(s) 323
SatI GCNGC 1 cut(s) 233
Sau3AI GATC 3 cut(s) 207, 283, 320
SetI ASST 2 cut(s) 98, 112
Sse9I AATT 1 cut(s) 48
SsiI CCGC 2 cut(s) 198, 232
TaqI TCGA 1 cut(s) 323
TasI AATT 1 cut(s) 48
TauI GCSGC 1 cut(s) 235
TfiI GAWTC 1 cut(s) 11
TscAI CASTG 1 cut(s) 340
TspDTI ATGAA 1 cut(s) 189
TspGWI ACGGA 1 cut(s) 200
TspRI CASTG 1 cut(s) 340
XceI RCATGY 2 cut(s) 82, 298
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.