Rh2CG288100

Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Reverse (-)
32417681 .. 32420743
3063 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG288100.1

Sequence Viewer

Length: 378 bp
ATGTGGAAGTCACCTAAATTGTTTCTGCAGTTGGATATAATTCATGACTTCTTTTTTTTTGACACTGCTGAAGTTTCCTCTGCAAACTACTCTGCTCGAGATAATGGAGTGAGGGCTGCGATGTTTGTCAGAGATGCTAAGGCTCTTTGTCCACAACTTGTCATTTTTCCTTATGATTTTGAAGTGTATGAGGAGATTGCAATTCGTTTAGCTAGGGGAACGAAAATTTCGCTTGCACCATCTGTTCTTGCCAGCATTTATAAAGATTTGGGCTTACTGGGAAGTGCAATTGTAGATTTAAGTAAACTAACGAGTAGTGATGATACTATAGAATTGAACCTCAGGTCACCATTGCAGTTTGTTCAAGTTTGGGCATAG

Protein Analysis

125

Amino Acids

14.04

Weight (kDa)

5.01

Isoelectric Point (pI)

35.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IMS PF00817 23 - 72 6.6e-12 impB/mucB/samB family
PMD PF10536 63 - 125 3.6e-11 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000565)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 261
AcsI RAATTY 1 cut(s) 225
AcuI CTGAAG 1 cut(s) 90
AgsI TTSAA 3 cut(s) 182, 337, 365
AluBI AGCT 1 cut(s) 212
AluI AGCT 1 cut(s) 212
Ama87I CYCGRG 1 cut(s) 96
ApeKI GCWGC 1 cut(s) 116
ApoI RAATTY 1 cut(s) 225
AsuHPI GGTGA 2 cut(s) 3, 339
AvaI CYCGRG 1 cut(s) 96
AxyI CCTNAGG 1 cut(s) 341
BbvI GCAGC 1 cut(s) 103
BccI CCATC 1 cut(s) 247
BfaI CTAG 1 cut(s) 213
BfmI CTRYAG 2 cut(s) 26, 327
BisI GCNGC 1 cut(s) 117
BlsI GCNGC 1 cut(s) 118
BmeT110I CYCGRG 1 cut(s) 96
BmrI ACTGGG 1 cut(s) 287
BmsI GCATC 1 cut(s) 124
BmuI ACTGGG 1 cut(s) 287
Bpu10I CCTNAGC 1 cut(s) 138
Bse1I ACTGG 1 cut(s) 282
Bse21I CCTNAGG 1 cut(s) 341
Bse3DI GCAATG 1 cut(s) 350
BseMI GCAATG 1 cut(s) 350
BseMII CTCAG 1 cut(s) 355
BseNI ACTGG 1 cut(s) 282
BseRI GAGGAG 1 cut(s) 206
BseXI GCAGC 1 cut(s) 103
BsiHKCI CYCGRG 1 cut(s) 96
BsoBI CYCGRG 1 cut(s) 96
BspCNI CTCAG 1 cut(s) 354
BspHI TCATGA 1 cut(s) 43
BspMAI CTGCAG 1 cut(s) 30
BsrDI GCAATG 1 cut(s) 350
BsrI ACTGG 1 cut(s) 282
BstC8I GCNNGC 2 cut(s) 234, 253
BstDEI CTNAG 2 cut(s) 138, 341
BstEII GGTNACC 1 cut(s) 345
BstPI GGTNACC 1 cut(s) 345
BstSFI CTRYAG 2 cut(s) 26, 327
BstV1I GCAGC 1 cut(s) 103
Bsu36I CCTNAGG 1 cut(s) 341
BtgZI GCGATG 1 cut(s) 134
BtsI GCAGTG 1 cut(s) 63
BtsIMutI CAGTG 1 cut(s) 63
Cac8I GCNNGC 2 cut(s) 234, 253
CciI TCATGA 1 cut(s) 43
CviAII CATG 1 cut(s) 44
CviJI RGCY 4 cut(s) 116, 143, 212, 273
CviKI_1 RGCY 4 cut(s) 116, 143, 212, 273
DdeI CTNAG 2 cut(s) 138, 341
Eco57I CTGAAG 1 cut(s) 90
Eco81I CCTNAGG 1 cut(s) 341
Eco88I CYCGRG 1 cut(s) 96
Eco91I GGTNACC 1 cut(s) 345
EcoO65I GGTNACC 1 cut(s) 345
FaeI CATG 1 cut(s) 47
FaiI YATR 7 cut(s) 38, 45, 174, 189, 261, 329, 376
FatI CATG 1 cut(s) 43
Fnu4HI GCNGC 1 cut(s) 117
Fsp4HI GCNGC 1 cut(s) 117
FspBI CTAG 1 cut(s) 213
GluI GCNGC 1 cut(s) 117
Hin1II CATG 1 cut(s) 47
HphI GGTGA 2 cut(s) 3, 339
Hpy166II GTNNAC 2 cut(s) 152, 305
Hpy188I TCNGA 1 cut(s) 131
Hpy188III TCNNGA 2 cut(s) 44, 98
Hpy8I GTNNAC 2 cut(s) 152, 305
HpyCH4V TGCA 6 cut(s) 28, 83, 200, 236, 287, 355
HpyF3I CTNAG 2 cut(s) 138, 341
Hsp92II CATG 1 cut(s) 47
LpnPI CCDG 3 cut(s) 263, 265, 328
Lsp1109I GCAGC 1 cut(s) 103
LweI GCATC 1 cut(s) 124
MaeI CTAG 1 cut(s) 213
MaeIII GTNAC 2 cut(s) 9, 345
MfeI CAATTG 1 cut(s) 288
MluCI AATT 6 cut(s) 17, 39, 201, 225, 288, 332
MmeI TCCRAC 1 cut(s) 12
MnlI CCTC 4 cut(s) 88, 105, 184, 350
MseI TTAA 1 cut(s) 299
MunI CAATTG 1 cut(s) 288
NlaIII CATG 1 cut(s) 47
NmuCI GTSAC 2 cut(s) 9, 345
PaeR7I CTCGAG 1 cut(s) 96
PagI TCATGA 1 cut(s) 43
PkrI GCNGC 1 cut(s) 118
PsiI TTATAA 1 cut(s) 261
PspEI GGTNACC 1 cut(s) 345
PstI CTGCAG 1 cut(s) 30
SaqAI TTAA 1 cut(s) 299
SatI GCNGC 1 cut(s) 117
SetI ASST 4 cut(s) 16, 214, 342, 347
SfaNI GCATC 1 cut(s) 124
SfcI CTRYAG 2 cut(s) 26, 327
Sfr274I CTCGAG 1 cut(s) 96
SlaI CTCGAG 1 cut(s) 96
SmlI CTYRAG 1 cut(s) 96
SmoI CTYRAG 1 cut(s) 96
Sse9I AATT 6 cut(s) 17, 39, 201, 225, 288, 332
SspMI CTAG 1 cut(s) 213
TaqI TCGA 1 cut(s) 97
TasI AATT 6 cut(s) 17, 39, 201, 225, 288, 332
Tru1I TTAA 1 cut(s) 299
Tru9I TTAA 1 cut(s) 299
TscAI CASTG 1 cut(s) 70
TseFI GTSAC 2 cut(s) 9, 345
TseI GCWGC 1 cut(s) 116
Tsp45I GTSAC 2 cut(s) 9, 345
TspDTI ATGAA 1 cut(s) 32
TspRI CASTG 1 cut(s) 70
XapI RAATTY 1 cut(s) 225
XhoI CTCGAG 1 cut(s) 96
XspI CTAG 1 cut(s) 213
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.