Rh5CG266000

Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
28623041 .. 28635029
11989 bp
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UTR
Exon/CDS
Intron
Rh5CG266000.1

Sequence Viewer

Length: 588 bp
ATGCACGGAGTGAGGGCTGCGATGTTTGTTAGAGATGCTAAGGCTCTTTGTCCACACCTTGTCATTCTTCCTTATGATTTTGAAGCGTATGAGGAGGGAACTAATCGGTTCTATGACATTCTGCATAAGCACTGCAGAAAAGTACAAGCAGTAAGCTGTGACGAAGCATTTTTAGATGTCACATACTTGGAAGGGGTAGATATGGATATGTTGGCCTCAATTATAATACAAGAGATCTTTGAGACTACTGGATGCATTGCAAGTGCTGGTATAGCTAGAAATATGCTCATGGCTCGCCTTACAACAAGAACTGCTAAACCAGACGGTCAATGCAACATTCCTCCCAAAAGGTGCAATATGCAAGAAGGGATGGAGGGAAATCCTGTTGCTAAAACCATGAAGATTGTTTCAAGAGGCATGGCTGTTCTTACAGTTCCGTTTACCATGGAATTTCCAAAGATTTTGATGTCAAAGAACTTGATGAATGGTGTGTATATTAGCAATATGTACAACTTCATGAGAGGTTTGCTTCATTTTGTCAGTGAAAGCAAACCAGAAAATAATGCCAGCAAGGATGGCATCCTATAA

Protein Analysis

195

Amino Acids

21.87

Weight (kDa)

6.95

Isoelectric Point (pI)

36.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IMS PF00817 2 - 102 1.8e-24 impB/mucB/samB family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000565)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 224
AcsI RAATTY 1 cut(s) 449
AdeI CACNNNGTG 1 cut(s) 10
AfaI GTAC 2 cut(s) 144, 509
AgsI TTSAA 2 cut(s) 83, 411
AluBI AGCT 2 cut(s) 156, 275
AluI AGCT 2 cut(s) 156, 275
Alw26I GTCTC 1 cut(s) 236
AoxI GGCC 1 cut(s) 213
ApeKI GCWGC 1 cut(s) 17
ApoI RAATTY 1 cut(s) 449
BbvI GCAGC 1 cut(s) 4
BccI CCATC 2 cut(s) 364, 569
BcoDI GTCTC 1 cut(s) 236
BfaI CTAG 1 cut(s) 276
BfmI CTRYAG 1 cut(s) 133
BglII AGATCT 1 cut(s) 234
BisI GCNGC 1 cut(s) 18
BlsI GCNGC 1 cut(s) 19
BmsI GCATC 2 cut(s) 25, 242
Bpu10I CCTNAGC 1 cut(s) 39
BsaJI CCNNGG 1 cut(s) 444
Bse1I ACTGG 1 cut(s) 253
Bse3DI GCAATG 1 cut(s) 255
BseDI CCNNGG 1 cut(s) 444
BseGI GGATG 4 cut(s) 257, 375, 579, 580
BseMI GCAATG 1 cut(s) 255
BseNI ACTGG 1 cut(s) 253
BseRI GAGGAG 1 cut(s) 107
BseXI GCAGC 1 cut(s) 4
BshFI GGCC 1 cut(s) 215
BsmAI GTCTC 1 cut(s) 236
BsnI GGCC 1 cut(s) 215
Bsp1407I TGTACA 1 cut(s) 507
Bsp143I GATC 1 cut(s) 234
Bsp19I CCATGG 1 cut(s) 444
BspANI GGCC 1 cut(s) 215
BspHI TCATGA 1 cut(s) 516
BspMAI CTGCAG 1 cut(s) 137
BsrDI GCAATG 1 cut(s) 255
BsrGI TGTACA 1 cut(s) 507
BsrI ACTGG 1 cut(s) 253
BssECI CCNNGG 1 cut(s) 444
BssMI GATC 1 cut(s) 234
BssT1I CCWWGG 1 cut(s) 444
Bst4CI ACNGT 2 cut(s) 326, 433
BstAUI TGTACA 1 cut(s) 507
BstC8I GCNNGC 2 cut(s) 295, 568
BstDEI CTNAG 1 cut(s) 39
BstDSI CCRYGG 1 cut(s) 444
BstF5I GGATG 4 cut(s) 257, 375, 579, 580
BstKTI GATC 1 cut(s) 237
BstMAI GTCTC 1 cut(s) 236
BstMBI GATC 1 cut(s) 234
BstMWI GCNNNNNNNGC 2 cut(s) 272, 576
BstSFI CTRYAG 1 cut(s) 133
BstV1I GCAGC 1 cut(s) 4
BstX2I RGATCY 1 cut(s) 234
BstYI RGATCY 1 cut(s) 234
BsuRI GGCC 1 cut(s) 215
BtgI CCRYGG 1 cut(s) 444
BtgZI GCGATG 1 cut(s) 35
BtsCI GGATG 4 cut(s) 257, 375, 579, 580
BtsI GCAGTG 1 cut(s) 130
BtsIMutI CAGTG 2 cut(s) 130, 547
Cac8I GCNNGC 2 cut(s) 295, 568
CciI TCATGA 1 cut(s) 516
Csp6I GTAC 2 cut(s) 143, 508
CviAII CATG 5 cut(s) 289, 397, 418, 445, 517
CviJI RGCY 7 cut(s) 17, 44, 156, 215, 275, 293, 422
CviKI_1 RGCY 7 cut(s) 17, 44, 156, 215, 275, 293, 422
CviQI GTAC 2 cut(s) 143, 508
DdeI CTNAG 1 cut(s) 39
DpnI GATC 1 cut(s) 236
DpnII GATC 1 cut(s) 234
DraIII CACNNNGTG 1 cut(s) 10
Eco130I CCWWGG 1 cut(s) 444
EcoT14I CCWWGG 1 cut(s) 444
EcoT22I ATGCAT 1 cut(s) 257
ErhI CCWWGG 1 cut(s) 444
FaeI CATG 5 cut(s) 292, 400, 421, 448, 520
FatI CATG 5 cut(s) 288, 396, 417, 444, 516
Fnu4HI GCNGC 1 cut(s) 18
FokI GGATG 3 cut(s) 264, 382, 566
Fsp4HI GCNGC 1 cut(s) 18
FspBI CTAG 1 cut(s) 276
GluI GCNGC 1 cut(s) 18
HaeIII GGCC 1 cut(s) 215
Hin1II CATG 5 cut(s) 292, 400, 421, 448, 520
Hpy166II GTNNAC 2 cut(s) 53, 441
Hpy188III TCNNGA 2 cut(s) 411, 517
Hpy8I GTNNAC 2 cut(s) 53, 441
HpyAV CCTTC 2 cut(s) 185, 359
HpyCH4III ACNGT 2 cut(s) 326, 433
HpyCH4V TGCA 8 cut(s) 4, 124, 135, 255, 260, 333, 354, 361
HpyF10VI GCNNNNNNNGC 2 cut(s) 272, 576
HpyF3I CTNAG 1 cut(s) 39
Hsp92II CATG 5 cut(s) 292, 400, 421, 448, 520
Kzo9I GATC 1 cut(s) 234
LpnPI CCDG 6 cut(s) 234, 252, 333, 396, 567, 580
Lsp1109I GCAGC 1 cut(s) 4
LweI GCATC 2 cut(s) 25, 242
MaeI CTAG 1 cut(s) 276
MaeIII GTNAC 2 cut(s) 158, 178
MalI GATC 1 cut(s) 236
MboI GATC 1 cut(s) 234
MboII GAAGA 2 cut(s) 59, 412
MflI RGATCY 1 cut(s) 234
MluCI AATT 2 cut(s) 219, 449
MnlI CCTC 8 cut(s) 6, 85, 88, 226, 351, 367, 407, 515
Mph1103I ATGCAT 1 cut(s) 257
MwoI GCNNNNNNNGC 2 cut(s) 272, 576
NcoI CCATGG 1 cut(s) 444
NdeII GATC 1 cut(s) 234
NlaIII CATG 5 cut(s) 292, 400, 421, 448, 520
NmuCI GTSAC 2 cut(s) 158, 178
NsiI ATGCAT 1 cut(s) 257
PagI TCATGA 1 cut(s) 516
PkrI GCNGC 1 cut(s) 19
PsiI TTATAA 1 cut(s) 224
PstI CTGCAG 1 cut(s) 137
PsuI RGATCY 1 cut(s) 234
RsaI GTAC 2 cut(s) 144, 509
RsaNI GTAC 2 cut(s) 143, 508
SatI GCNGC 1 cut(s) 18
Sau3AI GATC 1 cut(s) 234
SetI ASST 5 cut(s) 60, 158, 277, 353, 526
SfaNI GCATC 2 cut(s) 25, 242
SfcI CTRYAG 1 cut(s) 133
Sse9I AATT 2 cut(s) 219, 449
SspMI CTAG 1 cut(s) 276
StyI CCWWGG 1 cut(s) 444
TaaI ACNGT 2 cut(s) 326, 433
TasI AATT 2 cut(s) 219, 449
TatI WGTACW 2 cut(s) 142, 507
TscAI CASTG 2 cut(s) 137, 547
TseFI GTSAC 2 cut(s) 158, 178
TseI GCWGC 1 cut(s) 17
Tsp45I GTSAC 2 cut(s) 158, 178
TspDTI ATGAA 4 cut(s) 413, 497, 505, 521
TspGWI ACGGA 2 cut(s) 21, 426
TspRI CASTG 2 cut(s) 137, 547
XapI RAATTY 1 cut(s) 449
XspI CTAG 1 cut(s) 276
Zsp2I ATGCAT 1 cut(s) 257
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.