Rh7DG471300

Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Forward (+)
67351508 .. 67355872
4365 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG471300.1

Sequence Viewer

Length: 597 bp
ATGATTTTTGCTGTCTCAGACATAGAGAAGTTCTATATTGAAGTCCAGGAAATTATACTTGCTAGGTACAATAAAACTTTTGATTGGGCTTTGAAGGCAAAAATGATGGGAAAGAAAGCAATAGAAGCTGCTCGGGTCTTTGTTGAAGACACTGGACTTAGTGACTCTCTTACTGCTGAGGACTTTCTGGTTGAAAGAGAGGCAATGTTGCAGAAATTGTTTCCAACAAGCGAGCTGATGCCAGGAGTGAGGGCTGCGATGTTTGTTAGAGATGCTAAGGCTCTTTGTCCACACCTTGTCATTCTTCCTTATGATTTTGAAGCGTATGAGGAGGTAACTAATCGGTTCTATGACATTCTGCATAAGCACTGCAGAAAAGTACAAGCAGTAAGCTGTGACGAAGCATTTTTAGATGTCACATACTTGGAAGGGGTAGATATGGATGTGTTAGCCTCAATTATAATACAAGAGATCTTTGAGACTACTGGATGCATTGCAAGTGCTGGCATAGCTAGAAATATGCTCATGGCTCGCCTTACAACAAGAACTGCTAAACCAGACGGTCAATGCAACATTCCTCCCCAAAAGGGGGCATGA

Protein Analysis

198

Amino Acids

22.3

Weight (kDa)

5.06

Isoelectric Point (pI)

44.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IMS PF00817 82 - 181 6.7e-25 impB/mucB/samB family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000565)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 461
AfaI GTAC 2 cut(s) 68, 381
AfiI CCNNNNNNNGG 3 cut(s) 587, 588, 589
AgsI TTSAA 5 cut(s) 41, 94, 146, 194, 320
AjnI CCWGG 2 cut(s) 45, 241
AluBI AGCT 4 cut(s) 128, 235, 393, 512
AluI AGCT 4 cut(s) 128, 235, 393, 512
Alw26I GTCTC 2 cut(s) 19, 473
Ama87I CYCGRG 1 cut(s) 132
ApeKI GCWGC 2 cut(s) 128, 254
AvaI CYCGRG 1 cut(s) 132
BbsI GAAGAC 1 cut(s) 153
BbvCI CCTCAGC 1 cut(s) 177
BbvI GCAGC 2 cut(s) 115, 241
BccI CCATC 1 cut(s) 100
BciT130I CCWGG 2 cut(s) 47, 243
BcoDI GTCTC 2 cut(s) 19, 473
BfaI CTAG 2 cut(s) 63, 513
BfmI CTRYAG 1 cut(s) 370
BglII AGATCT 1 cut(s) 471
BisI GCNGC 2 cut(s) 129, 255
BlsI GCNGC 2 cut(s) 130, 256
Bme1390I CCNGG 2 cut(s) 47, 243
BmeT110I CYCGRG 1 cut(s) 132
BmrFI CCNGG 2 cut(s) 47, 243
BmsI GCATC 3 cut(s) 228, 262, 479
BpiI GAAGAC 1 cut(s) 153
Bpu10I CCTNAGC 2 cut(s) 177, 276
Bsc4I CCNNNNNNNGG 3 cut(s) 587, 588, 589
Bse1I ACTGG 2 cut(s) 157, 490
Bse3DI GCAATG 2 cut(s) 210, 492
BseBI CCWGG 2 cut(s) 47, 243
BseGI GGATG 2 cut(s) 448, 494
BseLI CCNNNNNNNGG 3 cut(s) 587, 588, 589
BseMI GCAATG 2 cut(s) 210, 492
BseMII CTCAG 2 cut(s) 30, 168
BseNI ACTGG 2 cut(s) 157, 490
BseRI GAGGAG 1 cut(s) 344
BseXI GCAGC 2 cut(s) 115, 241
BsiHKCI CYCGRG 1 cut(s) 132
BslI CCNNNNNNNGG 3 cut(s) 587, 588, 589
BsmAI GTCTC 2 cut(s) 19, 473
BsoBI CYCGRG 1 cut(s) 132
Bsp143I GATC 1 cut(s) 471
BspCNI CTCAG 2 cut(s) 29, 169
BspMAI CTGCAG 1 cut(s) 374
BsrDI GCAATG 2 cut(s) 210, 492
BsrI ACTGG 2 cut(s) 157, 490
BssMI GATC 1 cut(s) 471
Bst2UI CCWGG 2 cut(s) 47, 243
Bst4CI ACNGT 1 cut(s) 563
BstC8I GCNNGC 3 cut(s) 233, 505, 532
BstDEI CTNAG 4 cut(s) 16, 158, 177, 276
BstF5I GGATG 2 cut(s) 448, 494
BstKTI GATC 1 cut(s) 474
BstMAI GTCTC 2 cut(s) 19, 473
BstMBI GATC 1 cut(s) 471
BstMWI GCNNNNNNNGC 3 cut(s) 95, 125, 509
BstNI CCWGG 2 cut(s) 47, 243
BstSCI CCNGG 2 cut(s) 45, 241
BstSFI CTRYAG 1 cut(s) 370
BstV1I GCAGC 2 cut(s) 115, 241
BstV2I GAAGAC 1 cut(s) 153
BstX2I RGATCY 1 cut(s) 471
BstYI RGATCY 1 cut(s) 471
BtgZI GCGATG 1 cut(s) 272
BtsCI GGATG 2 cut(s) 448, 494
BtsI GCAGTG 1 cut(s) 367
BtsIMutI CAGTG 2 cut(s) 150, 367
Cac8I GCNNGC 3 cut(s) 233, 505, 532
Csp6I GTAC 2 cut(s) 67, 380
CviAII CATG 2 cut(s) 526, 594
CviJI RGCY 9 cut(s) 89, 128, 235, 254, 281, 393, 452, 512, 530
CviKI_1 RGCY 9 cut(s) 89, 128, 235, 254, 281, 393, 452, 512, 530
CviQI GTAC 2 cut(s) 67, 380
DdeI CTNAG 4 cut(s) 16, 158, 177, 276
DpnI GATC 1 cut(s) 473
DpnII GATC 1 cut(s) 471
Eco88I CYCGRG 1 cut(s) 132
EcoRII CCWGG 2 cut(s) 45, 241
EcoT22I ATGCAT 1 cut(s) 494
FaeI CATG 2 cut(s) 529, 597
FatI CATG 2 cut(s) 525, 593
Fnu4HI GCNGC 2 cut(s) 129, 255
FokI GGATG 2 cut(s) 455, 501
Fsp4HI GCNGC 2 cut(s) 129, 255
FspBI CTAG 2 cut(s) 63, 513
GluI GCNGC 2 cut(s) 129, 255
Hin1II CATG 2 cut(s) 529, 597
HinfI GANTC 1 cut(s) 164
Hpy166II GTNNAC 1 cut(s) 290
Hpy188I TCNGA 1 cut(s) 19
Hpy8I GTNNAC 1 cut(s) 290
HpyAV CCTTC 2 cut(s) 88, 422
HpyCH4III ACNGT 1 cut(s) 563
HpyCH4V TGCA 6 cut(s) 211, 361, 372, 492, 497, 570
HpyF10VI GCNNNNNNNGC 3 cut(s) 95, 125, 509
HpyF3I CTNAG 4 cut(s) 16, 158, 177, 276
Hsp92II CATG 2 cut(s) 529, 597
Kzo9I GATC 1 cut(s) 471
LpnPI CCDG 9 cut(s) 32, 59, 138, 173, 228, 255, 471, 489, 570
Lsp1109I GCAGC 2 cut(s) 115, 241
LweI GCATC 3 cut(s) 228, 262, 479
MaeI CTAG 2 cut(s) 63, 513
MaeIII GTNAC 4 cut(s) 161, 334, 395, 415
MalI GATC 1 cut(s) 473
MboI GATC 1 cut(s) 471
MboII GAAGA 2 cut(s) 158, 296
MflI RGATCY 1 cut(s) 471
MluCI AATT 3 cut(s) 51, 215, 456
MlyI GAGTC 1 cut(s) 158
MmeI TCCRAC 1 cut(s) 248
MnlI CCTC 7 cut(s) 172, 193, 243, 322, 325, 463, 588
Mph1103I ATGCAT 1 cut(s) 494
MspR9I CCNGG 2 cut(s) 47, 243
MvaI CCWGG 2 cut(s) 47, 243
MwoI GCNNNNNNNGC 3 cut(s) 95, 125, 509
NdeII GATC 1 cut(s) 471
NlaIII CATG 2 cut(s) 529, 597
NmuCI GTSAC 3 cut(s) 161, 395, 415
NsiI ATGCAT 1 cut(s) 494
PfoI TCCNGGA 1 cut(s) 45
PkrI GCNGC 2 cut(s) 130, 256
PleI GAGTC 1 cut(s) 158
PpsI GAGTC 1 cut(s) 158
PsiI TTATAA 1 cut(s) 461
Psp6I CCWGG 2 cut(s) 45, 241
PspGI CCWGG 2 cut(s) 45, 241
PstI CTGCAG 1 cut(s) 374
PsuI RGATCY 1 cut(s) 471
RsaI GTAC 2 cut(s) 68, 381
RsaNI GTAC 2 cut(s) 67, 380
SatI GCNGC 2 cut(s) 129, 255
Sau3AI GATC 1 cut(s) 471
SchI GAGTC 1 cut(s) 158
ScrFI CCNGG 2 cut(s) 47, 243
SetI ASST 7 cut(s) 68, 130, 237, 297, 336, 395, 514
SfaNI GCATC 3 cut(s) 228, 262, 479
SfcI CTRYAG 1 cut(s) 370
Sse9I AATT 3 cut(s) 51, 215, 456
SspMI CTAG 2 cut(s) 63, 513
StyD4I CCNGG 2 cut(s) 45, 241
TaaI ACNGT 1 cut(s) 563
TasI AATT 3 cut(s) 51, 215, 456
TatI WGTACW 1 cut(s) 379
TscAI CASTG 2 cut(s) 157, 374
TseFI GTSAC 3 cut(s) 161, 395, 415
TseI GCWGC 2 cut(s) 128, 254
Tsp45I GTSAC 3 cut(s) 161, 395, 415
TspRI CASTG 2 cut(s) 157, 374
XspI CTAG 2 cut(s) 63, 513
Zsp2I ATGCAT 1 cut(s) 494
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.