Rh6CG008400

Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Forward (+)
1021411 .. 1026717
5307 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG008400.1

Sequence Viewer

Length: 408 bp
ATGGTCTGTTTTGGAGTGAGGGCTGCGATGTTTGTTAGAGATGCTAAGGCTCTTTGTCCACACCTTGTCATTCTTCCTTATGATTTTGAAGCGTATGAGGAGGTAACTAATCGGTTCTATGACATTCTGCATAAGCACTGCAGAAAAGTACAAGCAGTAAGCTGTGACGAAGCATTTTTAGATGTCACATACTTGGAAGGGGTAGATATGGATATGTTGGCCTCAATTATAATACAAGAGATCTTTGAGACTACTGGATGCATTGCAAGTGCTGGTATAGCTAGAAATATGCTCATGGCTCGCCTTACAACAAGAACTGCTAAACCAGACGATCAATGCAACATTCCTCCCAAAAGGTTAATTTTTGCGCTCTTCATTATGTTTTTCACAAATGATATAGGCACATAA

Protein Analysis

135

Amino Acids

15.31

Weight (kDa)

5.27

Isoelectric Point (pI)

31.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IMS PF00817 4 - 104 7.3e-26 impB/mucB/samB family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000565)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 230
AfaI GTAC 1 cut(s) 150
AgsI TTSAA 1 cut(s) 89
AluBI AGCT 2 cut(s) 162, 281
AluI AGCT 2 cut(s) 162, 281
Alw26I GTCTC 1 cut(s) 242
AoxI GGCC 1 cut(s) 219
ApeKI GCWGC 1 cut(s) 23
AspLEI GCGC 1 cut(s) 370
BbvI GCAGC 1 cut(s) 10
BcoDI GTCTC 1 cut(s) 242
BfaI CTAG 1 cut(s) 282
BfmI CTRYAG 1 cut(s) 139
BglII AGATCT 1 cut(s) 240
BisI GCNGC 1 cut(s) 24
BlsI GCNGC 1 cut(s) 25
BmsI GCATC 2 cut(s) 31, 248
Bpu10I CCTNAGC 1 cut(s) 45
Bse1I ACTGG 1 cut(s) 259
Bse3DI GCAATG 1 cut(s) 261
BseGI GGATG 1 cut(s) 263
BseMI GCAATG 1 cut(s) 261
BseNI ACTGG 1 cut(s) 259
BseRI GAGGAG 1 cut(s) 113
BseXI GCAGC 1 cut(s) 10
BshFI GGCC 1 cut(s) 221
BsmAI GTCTC 1 cut(s) 242
BsnI GGCC 1 cut(s) 221
Bsp143I GATC 2 cut(s) 240, 331
BspANI GGCC 1 cut(s) 221
BspMAI CTGCAG 1 cut(s) 143
BspQI GCTCTTC 1 cut(s) 377
BsrDI GCAATG 1 cut(s) 261
BsrI ACTGG 1 cut(s) 259
BssMI GATC 2 cut(s) 240, 331
Bst6I CTCTTC 1 cut(s) 377
BstC8I GCNNGC 1 cut(s) 301
BstDEI CTNAG 1 cut(s) 45
BstF5I GGATG 1 cut(s) 263
BstHHI GCGC 1 cut(s) 370
BstKTI GATC 2 cut(s) 243, 334
BstMAI GTCTC 1 cut(s) 242
BstMBI GATC 2 cut(s) 240, 331
BstMWI GCNNNNNNNGC 1 cut(s) 278
BstSFI CTRYAG 1 cut(s) 139
BstV1I GCAGC 1 cut(s) 10
BstX2I RGATCY 1 cut(s) 240
BstYI RGATCY 1 cut(s) 240
BsuRI GGCC 1 cut(s) 221
BtgZI GCGATG 1 cut(s) 41
BtsCI GGATG 1 cut(s) 263
BtsI GCAGTG 1 cut(s) 136
BtsIMutI CAGTG 1 cut(s) 136
Cac8I GCNNGC 1 cut(s) 301
CfoI GCGC 1 cut(s) 370
Csp6I GTAC 1 cut(s) 149
CviAII CATG 1 cut(s) 295
CviJI RGCY 6 cut(s) 23, 50, 162, 221, 281, 299
CviKI_1 RGCY 6 cut(s) 23, 50, 162, 221, 281, 299
CviQI GTAC 1 cut(s) 149
DdeI CTNAG 1 cut(s) 45
DpnI GATC 2 cut(s) 242, 333
DpnII GATC 2 cut(s) 240, 331
Eam1104I CTCTTC 1 cut(s) 377
EarI CTCTTC 1 cut(s) 377
EcoT22I ATGCAT 1 cut(s) 263
FaeI CATG 1 cut(s) 298
FatI CATG 1 cut(s) 294
Fnu4HI GCNGC 1 cut(s) 24
FokI GGATG 1 cut(s) 270
Fsp4HI GCNGC 1 cut(s) 24
FspBI CTAG 1 cut(s) 282
GlaI GCGC 1 cut(s) 369
GluI GCNGC 1 cut(s) 24
HaeIII GGCC 1 cut(s) 221
HhaI GCGC 1 cut(s) 370
Hin1II CATG 1 cut(s) 298
Hin6I GCGC 1 cut(s) 368
HinP1I GCGC 1 cut(s) 368
Hpy166II GTNNAC 1 cut(s) 59
Hpy8I GTNNAC 1 cut(s) 59
HpyAV CCTTC 1 cut(s) 191
HpyCH4V TGCA 5 cut(s) 130, 141, 261, 266, 339
HpyF10VI GCNNNNNNNGC 1 cut(s) 278
HpyF3I CTNAG 1 cut(s) 45
Hsp92II CATG 1 cut(s) 298
HspAI GCGC 1 cut(s) 368
Kzo9I GATC 2 cut(s) 240, 331
LguI GCTCTTC 1 cut(s) 377
LpnPI CCDG 3 cut(s) 240, 258, 339
Lsp1109I GCAGC 1 cut(s) 10
LweI GCATC 2 cut(s) 31, 248
MaeI CTAG 1 cut(s) 282
MaeIII GTNAC 3 cut(s) 103, 164, 184
MalI GATC 2 cut(s) 242, 333
MboI GATC 2 cut(s) 240, 331
MboII GAAGA 2 cut(s) 65, 364
MflI RGATCY 1 cut(s) 240
MluCI AATT 2 cut(s) 225, 360
MnlI CCTC 5 cut(s) 12, 91, 94, 232, 357
Mph1103I ATGCAT 1 cut(s) 263
MseI TTAA 1 cut(s) 359
MwoI GCNNNNNNNGC 1 cut(s) 278
NdeII GATC 2 cut(s) 240, 331
NlaIII CATG 1 cut(s) 298
NmuCI GTSAC 2 cut(s) 164, 184
NsiI ATGCAT 1 cut(s) 263
PciSI GCTCTTC 1 cut(s) 377
PkrI GCNGC 1 cut(s) 25
PsiI TTATAA 1 cut(s) 230
PstI CTGCAG 1 cut(s) 143
PsuI RGATCY 1 cut(s) 240
RsaI GTAC 1 cut(s) 150
RsaNI GTAC 1 cut(s) 149
SapI GCTCTTC 1 cut(s) 377
SaqAI TTAA 1 cut(s) 359
SatI GCNGC 1 cut(s) 24
Sau3AI GATC 2 cut(s) 240, 331
SetI ASST 5 cut(s) 66, 105, 164, 283, 359
SfaNI GCATC 2 cut(s) 31, 248
SfcI CTRYAG 1 cut(s) 139
Sse9I AATT 2 cut(s) 225, 360
SspMI CTAG 1 cut(s) 282
TasI AATT 2 cut(s) 225, 360
TatI WGTACW 1 cut(s) 148
Tru1I TTAA 1 cut(s) 359
Tru9I TTAA 1 cut(s) 359
TscAI CASTG 1 cut(s) 143
TseFI GTSAC 2 cut(s) 164, 184
TseI GCWGC 1 cut(s) 23
Tsp45I GTSAC 2 cut(s) 164, 184
TspDTI ATGAA 1 cut(s) 364
TspRI CASTG 1 cut(s) 143
XspI CTAG 1 cut(s) 282
Zsp2I ATGCAT 1 cut(s) 263
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.