Rh2CG248000

Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Forward (+)
26073366 .. 26084250
10885 bp
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UTR
Exon/CDS
Intron
Rh2CG248000.1

Sequence Viewer

Length: 687 bp
ATGAGTTTCATCTTTGGCAAACGAAAAACACCTGCAGTGATCACGGTGGTGAAGATGTTGACAAAGTTTGAGACAAAGAGTAATAGAGTGAAGGGACTGAGCTTCCACACTAAGAGGCCATGGATCCTCGCGAGTCTGCACAGTGGTGTGATCCAACTATGGGACTACCATATGGGGACTCTTACTGATTTCCACAAATCAGAGCCTCTCTTTGTGTCTAGAGGAGTGAGGGCTGCGATGTTTGTTAGAGATGCTAAGGCTCTTTGTCCACACCTTGTCATTCTTCCTTATGATTTTGAAGCATATGAGGAGGTAACTAATCGGTTCTATGACATTCTGCATAAGCACTGCAGAAAAGTACAAGCAGTAAGCTGTGACGAAGCATTTTTAGATGTCACATACTTGGAAGGGGTAGATATGGATATGTTAGCCTCAATTATAATACAAGAGATCTTTGAGACTACTGGATGCATTGCAAGTGCTGGCATAGCTAGAAATATGCTCATGGCTCGCCTTACAACAAGAACTGCTAAACCAGACGGTCAATGCAACATTCCTCCCAAAAGGTGCAATATGCAAGAAGGGATGGAGGGAAATCCATTTGCTAAAACCATGAAGACTGTTTCAAGAGGCATGGCTGTTCTTACAGTTCCGTTTACCATGGAATTTCCAAAGAGTGTAGGCTGA

Protein Analysis

228

Amino Acids

25.72

Weight (kDa)

9.14

Isoelectric Point (pI)

39.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IMS PF00817 73 - 174 2.4e-25 impB/mucB/samB family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000565)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 440
AarI CACCTGC 1 cut(s) 40
Acc36I ACCTGC 1 cut(s) 40
AccII CGCG 1 cut(s) 131
AclWI GGATC 3 cut(s) 118, 131, 145
AcsI RAATTY 1 cut(s) 665
AfaI GTAC 1 cut(s) 360
AfiI CCNNNNNNNGG 1 cut(s) 160
AgsI TTSAA 2 cut(s) 299, 627
AleI CACNNNNGTG 2 cut(s) 47, 144
AluBI AGCT 3 cut(s) 102, 372, 491
AluI AGCT 3 cut(s) 102, 372, 491
Alw26I GTCTC 2 cut(s) 65, 452
AlwI GGATC 3 cut(s) 118, 131, 145
AoxI GGCC 1 cut(s) 116
ApeKI GCWGC 1 cut(s) 233
ApoI RAATTY 1 cut(s) 665
AsuHPI GGTGA 1 cut(s) 61
BamHI GGATCC 1 cut(s) 123
BbsI GAAGAC 1 cut(s) 623
BbvI GCAGC 1 cut(s) 220
BccI CCATC 1 cut(s) 580
BclI TGATCA 1 cut(s) 39
BcoDI GTCTC 2 cut(s) 65, 452
BfaI CTAG 2 cut(s) 219, 492
BfmI CTRYAG 2 cut(s) 33, 349
BfuAI ACCTGC 1 cut(s) 40
BglII AGATCT 1 cut(s) 450
BisI GCNGC 1 cut(s) 234
BlsI GCNGC 1 cut(s) 235
BmiI GGNNCC 1 cut(s) 125
BmsI GCATC 2 cut(s) 241, 458
BpiI GAAGAC 1 cut(s) 623
Bpu10I CCTNAGC 1 cut(s) 255
BsaJI CCNNGG 2 cut(s) 119, 660
Bsc4I CCNNNNNNNGG 1 cut(s) 160
Bse1I ACTGG 1 cut(s) 469
Bse3DI GCAATG 1 cut(s) 471
BseDI CCNNGG 2 cut(s) 119, 660
BseGI GGATG 2 cut(s) 473, 591
BseLI CCNNNNNNNGG 1 cut(s) 160
BseMI GCAATG 1 cut(s) 471
BseMII CTCAG 1 cut(s) 89
BseNI ACTGG 1 cut(s) 469
BseRI GAGGAG 2 cut(s) 237, 323
BseXI GCAGC 1 cut(s) 220
BsgI GTGCAG 1 cut(s) 122
Bsh1236I CGCG 1 cut(s) 131
BshFI GGCC 1 cut(s) 118
BslFI GGGAC 3 cut(s) 108, 176, 190
BslI CCNNNNNNNGG 1 cut(s) 160
BsmAI GTCTC 2 cut(s) 65, 452
BsmFI GGGAC 3 cut(s) 108, 176, 190
BsnI GGCC 1 cut(s) 118
Bsp143I GATC 4 cut(s) 39, 123, 150, 450
Bsp19I CCATGG 2 cut(s) 119, 660
Bsp68I TCGCGA 1 cut(s) 131
BspANI GGCC 1 cut(s) 118
BspCNI CTCAG 1 cut(s) 90
BspFNI CGCG 1 cut(s) 131
BspLI GGNNCC 1 cut(s) 125
BspMAI CTGCAG 2 cut(s) 37, 353
BspMI ACCTGC 1 cut(s) 40
BspPI GGATC 3 cut(s) 118, 131, 145
BsrDI GCAATG 1 cut(s) 471
BsrI ACTGG 1 cut(s) 469
BssECI CCNNGG 2 cut(s) 119, 660
BssMI GATC 4 cut(s) 39, 123, 150, 450
BssT1I CCWWGG 2 cut(s) 119, 660
Bst4CI ACNGT 5 cut(s) 46, 143, 542, 622, 649
BstC8I GCNNGC 2 cut(s) 484, 511
BstDEI CTNAG 3 cut(s) 98, 111, 255
BstDSI CCRYGG 2 cut(s) 119, 660
BstF5I GGATG 2 cut(s) 473, 591
BstFNI CGCG 1 cut(s) 131
BstKTI GATC 4 cut(s) 42, 126, 153, 453
BstMAI GTCTC 2 cut(s) 65, 452
BstMBI GATC 4 cut(s) 39, 123, 150, 450
BstMWI GCNNNNNNNGC 1 cut(s) 488
BstSFI CTRYAG 2 cut(s) 33, 349
BstUI CGCG 1 cut(s) 131
BstV1I GCAGC 1 cut(s) 220
BstV2I GAAGAC 1 cut(s) 623
BstX2I RGATCY 2 cut(s) 123, 450
BstYI RGATCY 2 cut(s) 123, 450
BsuRI GGCC 1 cut(s) 118
BtgI CCRYGG 2 cut(s) 119, 660
BtgZI GCGATG 1 cut(s) 251
BtsCI GGATG 2 cut(s) 473, 591
BtsI GCAGTG 2 cut(s) 42, 346
BtsIMutI CAGTG 3 cut(s) 42, 148, 346
BtuMI TCGCGA 1 cut(s) 131
BveI ACCTGC 1 cut(s) 40
Cac8I GCNNGC 2 cut(s) 484, 511
Csp6I GTAC 1 cut(s) 359
CviAII CATG 5 cut(s) 120, 505, 613, 634, 661
CviQI GTAC 1 cut(s) 359
DdeI CTNAG 3 cut(s) 98, 111, 255
DpnI GATC 4 cut(s) 41, 125, 152, 452
DpnII GATC 4 cut(s) 39, 123, 150, 450
Eco130I CCWWGG 2 cut(s) 119, 660
EcoT14I CCWWGG 2 cut(s) 119, 660
EcoT22I ATGCAT 1 cut(s) 473
ErhI CCWWGG 2 cut(s) 119, 660
FaeI CATG 5 cut(s) 123, 508, 616, 637, 664
FaqI GGGAC 3 cut(s) 108, 176, 190
FatI CATG 5 cut(s) 119, 504, 612, 633, 660
FauNDI CATATG 2 cut(s) 171, 304
FbaI TGATCA 1 cut(s) 39
Fnu4HI GCNGC 1 cut(s) 234
FokI GGATG 2 cut(s) 480, 598
Fsp4HI GCNGC 1 cut(s) 234
FspBI CTAG 2 cut(s) 219, 492
GluI GCNGC 1 cut(s) 234
HaeIII GGCC 1 cut(s) 118
Hin1II CATG 5 cut(s) 123, 508, 616, 637, 664
HincII GTYRAC 1 cut(s) 60
HindII GTYRAC 1 cut(s) 60
HinfI GANTC 2 cut(s) 133, 178
HphI GGTGA 1 cut(s) 61
Hpy166II GTNNAC 3 cut(s) 60, 269, 657
Hpy188I TCNGA 1 cut(s) 202
Hpy188III TCNNGA 3 cut(s) 130, 219, 627
Hpy8I GTNNAC 3 cut(s) 60, 269, 657
HpyAV CCTTC 3 cut(s) 85, 401, 575
HpyCH4III ACNGT 5 cut(s) 46, 143, 542, 622, 649
HpyCH4V TGCA 9 cut(s) 35, 139, 340, 351, 471, 476, 549, 570, 577
HpyF10VI GCNNNNNNNGC 1 cut(s) 488
HpyF3I CTNAG 3 cut(s) 98, 111, 255
Hsp92II CATG 5 cut(s) 123, 508, 616, 637, 664
Ksp22I TGATCA 1 cut(s) 39
Kzo9I GATC 4 cut(s) 39, 123, 150, 450
LpnPI CCDG 4 cut(s) 45, 450, 468, 549
Lsp1109I GCAGC 1 cut(s) 220
LweI GCATC 2 cut(s) 241, 458
MaeI CTAG 2 cut(s) 219, 492
MaeIII GTNAC 3 cut(s) 313, 374, 394
MalI GATC 4 cut(s) 41, 125, 152, 452
MboI GATC 4 cut(s) 39, 123, 150, 450
MboII GAAGA 3 cut(s) 64, 275, 628
MflI RGATCY 2 cut(s) 123, 450
MluCI AATT 2 cut(s) 435, 665
MlyI GAGTC 2 cut(s) 142, 172
MmeI TCCRAC 1 cut(s) 178
Mph1103I ATGCAT 1 cut(s) 473
MslI CAYNNNNRTG 2 cut(s) 47, 144
MvnI CGCG 1 cut(s) 131
MwoI GCNNNNNNNGC 1 cut(s) 488
NcoI CCATGG 2 cut(s) 119, 660
NdeI CATATG 2 cut(s) 171, 304
NdeII GATC 4 cut(s) 39, 123, 150, 450
NlaIII CATG 5 cut(s) 123, 508, 616, 637, 664
NlaIV GGNNCC 1 cut(s) 125
NmuCI GTSAC 2 cut(s) 374, 394
NruI TCGCGA 1 cut(s) 131
NsiI ATGCAT 1 cut(s) 473
OliI CACNNNNGTG 2 cut(s) 47, 144
PaqCI CACCTGC 1 cut(s) 40
PkrI GCNGC 1 cut(s) 235
PleI GAGTC 2 cut(s) 141, 172
PpsI GAGTC 2 cut(s) 141, 172
PsiI TTATAA 1 cut(s) 440
PspN4I GGNNCC 1 cut(s) 125
PstI CTGCAG 2 cut(s) 37, 353
PsuI RGATCY 2 cut(s) 123, 450
RruI TCGCGA 1 cut(s) 131
RsaI GTAC 1 cut(s) 360
RsaNI GTAC 1 cut(s) 359
RseI CAYNNNNRTG 2 cut(s) 47, 144
SatI GCNGC 1 cut(s) 234
Sau3AI GATC 4 cut(s) 39, 123, 150, 450
SchI GAGTC 2 cut(s) 142, 172
SetI ASST 7 cut(s) 34, 104, 276, 315, 374, 493, 569
SfaNI GCATC 2 cut(s) 241, 458
SfcI CTRYAG 2 cut(s) 33, 349
SmiMI CAYNNNNRTG 2 cut(s) 47, 144
Sse9I AATT 2 cut(s) 435, 665
SspMI CTAG 2 cut(s) 219, 492
StyI CCWWGG 2 cut(s) 119, 660
TaaI ACNGT 5 cut(s) 46, 143, 542, 622, 649
TasI AATT 2 cut(s) 435, 665
TatI WGTACW 1 cut(s) 358
TscAI CASTG 3 cut(s) 42, 148, 353
TseFI GTSAC 2 cut(s) 374, 394
TseI GCWGC 1 cut(s) 233
Tsp45I GTSAC 2 cut(s) 374, 394
TspDTI ATGAA 1 cut(s) 629
TspGWI ACGGA 1 cut(s) 642
TspRI CASTG 3 cut(s) 42, 148, 353
XapI RAATTY 1 cut(s) 665
XbaI TCTAGA 1 cut(s) 218
XspI CTAG 2 cut(s) 219, 492
Zsp2I ATGCAT 1 cut(s) 473
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.