Rh6AG032600

Belongs to the formin-like family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Forward (+)
4022794 .. 4022958
165 bp
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UTR
Exon/CDS
Intron
Rh6AG032600.1

Sequence Viewer

Length: 165 bp
ATGAGCGGAGCGACGCCGGAAGTGAACCGGTCGCCGTACCGGAAACTCAACTCGATCAAGAGATCGGATAGATATAGGCCGAGTCCCGAGTTTGCAGCCACTTCCGCCGATCGCAAAGCCACCGCCGCCTCAGAACCCGATTCGCCGTCGCCGATGACGTCTTGA

Protein Analysis

54

Amino Acids

5.87

Weight (kDa)

9.81

Isoelectric Point (pI)

80.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000565)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 161
AccBSI CCGCTC 1 cut(s) 6
AciI CCGC 4 cut(s) 6, 105, 123, 126
AcyI GRCGYC 2 cut(s) 14, 158
AfaI GTAC 1 cut(s) 38
AgeI ACCGGT 1 cut(s) 27
Ama87I CYCGRG 1 cut(s) 86
AoxI GGCC 1 cut(s) 77
ApeKI GCWGC 1 cut(s) 95
AsiGI ACCGGT 1 cut(s) 27
AvaI CYCGRG 1 cut(s) 86
BbvI GCAGC 1 cut(s) 107
BceAI ACGGC 2 cut(s) 19, 130
BisI GCNGC 2 cut(s) 96, 126
BlsI GCNGC 2 cut(s) 97, 127
BmeT110I CYCGRG 1 cut(s) 86
BsaHI GRCGYC 2 cut(s) 14, 158
BsaWI WCCGGW 2 cut(s) 27, 39
Bse118I RCCGGY 1 cut(s) 27
BseMII CTCAG 1 cut(s) 144
BseXI GCAGC 1 cut(s) 107
Bsh1285I CGRYCG 2 cut(s) 32, 112
BshFI GGCC 1 cut(s) 79
BshTI ACCGGT 1 cut(s) 27
BsiEI CGRYCG 2 cut(s) 32, 112
BsiHKCI CYCGRG 1 cut(s) 86
BsiSI CCGG 3 cut(s) 17, 28, 40
BslFI GGGAC 1 cut(s) 69
BsmFI GGGAC 1 cut(s) 69
BsnI GGCC 1 cut(s) 79
BsoBI CYCGRG 1 cut(s) 86
Bsp143I GATC 3 cut(s) 54, 62, 109
BspACI CCGC 4 cut(s) 6, 105, 123, 126
BspANI GGCC 1 cut(s) 79
BspCNI CTCAG 1 cut(s) 143
BsrBI CCGCTC 1 cut(s) 6
BsrFI RCCGGY 1 cut(s) 27
BssAI RCCGGY 1 cut(s) 27
BssMI GATC 3 cut(s) 54, 62, 109
BssNI GRCGYC 2 cut(s) 14, 158
BstACI GRCGYC 2 cut(s) 14, 158
BstDEI CTNAG 1 cut(s) 130
BstKTI GATC 3 cut(s) 57, 65, 112
BstMBI GATC 3 cut(s) 54, 62, 109
BstMCI CGRYCG 2 cut(s) 32, 112
BstMWI GCNNNNNNNGC 2 cut(s) 104, 125
BstV1I GCAGC 1 cut(s) 107
BsuRI GGCC 1 cut(s) 79
Cfr10I RCCGGY 1 cut(s) 27
CseI GACGC 1 cut(s) 22
Csp6I GTAC 1 cut(s) 37
CspAI ACCGGT 1 cut(s) 27
CviJI RGCY 3 cut(s) 79, 98, 119
CviKI_1 RGCY 3 cut(s) 79, 98, 119
CviQI GTAC 1 cut(s) 37
DdeI CTNAG 1 cut(s) 130
DpnI GATC 3 cut(s) 56, 64, 111
DpnII GATC 3 cut(s) 54, 62, 109
EciI GGCGGA 1 cut(s) 94
Eco88I CYCGRG 1 cut(s) 86
FaiI YATR 1 cut(s) 75
FaqI GGGAC 1 cut(s) 69
Fnu4HI GCNGC 2 cut(s) 96, 126
Fsp4HI GCNGC 2 cut(s) 96, 126
GluI GCNGC 2 cut(s) 96, 126
HaeIII GGCC 1 cut(s) 79
HapII CCGG 3 cut(s) 17, 28, 40
HgaI GACGC 1 cut(s) 22
Hin1I GRCGYC 2 cut(s) 14, 158
HinfI GANTC 2 cut(s) 82, 140
HpaII CCGG 3 cut(s) 17, 28, 40
Hpy166II GTNNAC 1 cut(s) 25
Hpy188I TCNGA 2 cut(s) 67, 133
Hpy188III TCNNGA 3 cut(s) 58, 86, 162
Hpy8I GTNNAC 1 cut(s) 25
Hpy99I CGWCG 2 cut(s) 16, 151
HpyCH4IV ACGT 1 cut(s) 158
HpyCH4V TGCA 1 cut(s) 95
HpyF10VI GCNNNNNNNGC 2 cut(s) 104, 125
HpyF3I CTNAG 1 cut(s) 130
HpySE526I ACGT 1 cut(s) 158
Hsp92I GRCGYC 2 cut(s) 14, 158
Kzo9I GATC 3 cut(s) 54, 62, 109
LmnI GCTCC 1 cut(s) 8
LpnPI CCDG 3 cut(s) 30, 41, 53
Lsp1109I GCAGC 1 cut(s) 107
MaeII ACGT 1 cut(s) 158
MalI GATC 3 cut(s) 56, 64, 111
MbiI CCGCTC 1 cut(s) 6
MboI GATC 3 cut(s) 54, 62, 109
MlyI GAGTC 1 cut(s) 91
MnlI CCTC 1 cut(s) 139
MspI CCGG 3 cut(s) 17, 28, 40
MwoI GCNNNNNNNGC 2 cut(s) 104, 125
NdeII GATC 3 cut(s) 54, 62, 109
NmeAIII GCCGAG 1 cut(s) 105
PcsI WCGNNNNNNNCGW 2 cut(s) 149, 155
PfeI GAWTC 1 cut(s) 140
PinAI ACCGGT 1 cut(s) 27
PkrI GCNGC 2 cut(s) 97, 127
Ple19I CGATCG 1 cut(s) 112
PleI GAGTC 1 cut(s) 90
PpsI GAGTC 1 cut(s) 90
PvuI CGATCG 1 cut(s) 112
RsaI GTAC 1 cut(s) 38
RsaNI GTAC 1 cut(s) 37
SatI GCNGC 2 cut(s) 96, 126
Sau3AI GATC 3 cut(s) 54, 62, 109
SchI GAGTC 1 cut(s) 91
SetI ASST 1 cut(s) 161
SgeI CNNG 9 cut(s) 29, 40, 52, 64, 70, 93, 98, 100, 149
SsiI CCGC 4 cut(s) 6, 105, 123, 126
TaiI ACGT 1 cut(s) 161
TaqI TCGA 1 cut(s) 53
TauI GCSGC 1 cut(s) 128
TfiI GAWTC 1 cut(s) 140
TseI GCWGC 1 cut(s) 95
ZraI GACGTC 1 cut(s) 159
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.