Rh6DG009300

Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Forward (+)
934342 .. 939648
5307 bp
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UTR
Exon/CDS
Intron
Rh6DG009300.1

Sequence Viewer

Length: 645 bp
ATGGTCTGTTTTGGAGTGAGGGCTGCGATGTTTGTTAGAGATGCTAAGGCTCTTTGTCCACACCTTGTCATTCTTCCTTATGATTTTGAAGCGTATGAGGAGGTAACTAATCGGTTCTATGACATTCTGCATAAGCACTGCAGAAAAGTACAAGCAGTAAGCTGTGACGAAGCATTTTTAGATGTCACATACTTGGAAGGGGTAGATATGGATATGTTGGCCTCAATTATAATACAAGAGATCTTTGAGACTACTGGATGCATTGCAAGTGCTGGTATAGCTAGAAATATGCTCATGGCTCGCCTTACAACAAGAACTGCTAAACCAGACGATCAATGCAACATTCCTCCCAAAAGGTGCAATATGCAAGAAGGGATGGAGGGAAATCCTGTTGCTAAAACCATGAAGACTGTTTCAAGAGGCATGGCTGTTCTTACAGTTCCGTTTACCATGGAATTTCCAAAGATTTTGATGTCAAAGAACTTGATGAATGTGAAAGCAAACCAGAAAATAATGCCAGCAAGGATGGATTTGGATGACAATTATCTGTTTGGAGACATACCCTTCTCGGTTTCAAAGCTTAAGAAGCTTAAGTTAATTTTTGCGCTCTTCATTATGTTTTTCACAAATGATATAGGCACATAA

Protein Analysis

214

Amino Acids

24.2

Weight (kDa)

7.55

Isoelectric Point (pI)

31.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IMS PF00817 4 - 104 2.7e-25 impB/mucB/samB family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000565)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 230
AcsI RAATTY 1 cut(s) 455
AfaI GTAC 1 cut(s) 150
AflII CTTAAG 2 cut(s) 581, 590
AgsI TTSAA 3 cut(s) 89, 417, 576
AluBI AGCT 4 cut(s) 162, 281, 580, 589
AluI AGCT 4 cut(s) 162, 281, 580, 589
Alw26I GTCTC 2 cut(s) 242, 549
AoxI GGCC 1 cut(s) 219
ApeKI GCWGC 1 cut(s) 23
ApoI RAATTY 1 cut(s) 455
AspLEI GCGC 1 cut(s) 607
BbsI GAAGAC 1 cut(s) 413
BbvI GCAGC 1 cut(s) 10
BccI CCATC 2 cut(s) 370, 520
BcoDI GTCTC 2 cut(s) 242, 549
BfaI CTAG 1 cut(s) 282
BfmI CTRYAG 1 cut(s) 139
BfrI CTTAAG 2 cut(s) 581, 590
BglII AGATCT 1 cut(s) 240
BisI GCNGC 1 cut(s) 24
BlsI GCNGC 1 cut(s) 25
BmsI GCATC 2 cut(s) 31, 248
BpiI GAAGAC 1 cut(s) 413
Bpu10I CCTNAGC 1 cut(s) 45
BsaJI CCNNGG 1 cut(s) 450
Bse1I ACTGG 1 cut(s) 259
Bse3DI GCAATG 1 cut(s) 261
BseDI CCNNGG 1 cut(s) 450
BseGI GGATG 4 cut(s) 263, 381, 531, 541
BseMI GCAATG 1 cut(s) 261
BseNI ACTGG 1 cut(s) 259
BseRI GAGGAG 1 cut(s) 113
BseXI GCAGC 1 cut(s) 10
BshFI GGCC 1 cut(s) 221
BsmAI GTCTC 2 cut(s) 242, 549
BsnI GGCC 1 cut(s) 221
Bsp143I GATC 2 cut(s) 240, 331
Bsp19I CCATGG 1 cut(s) 450
BspANI GGCC 1 cut(s) 221
BspMAI CTGCAG 1 cut(s) 143
BspQI GCTCTTC 1 cut(s) 614
BspTI CTTAAG 2 cut(s) 581, 590
BsrDI GCAATG 1 cut(s) 261
BsrI ACTGG 1 cut(s) 259
BssECI CCNNGG 1 cut(s) 450
BssMI GATC 2 cut(s) 240, 331
BssT1I CCWWGG 1 cut(s) 450
Bst4CI ACNGT 2 cut(s) 412, 439
Bst6I CTCTTC 1 cut(s) 614
BstAFI CTTAAG 2 cut(s) 581, 590
BstC8I GCNNGC 2 cut(s) 301, 519
BstDEI CTNAG 1 cut(s) 45
BstDSI CCRYGG 1 cut(s) 450
BstF5I GGATG 4 cut(s) 263, 381, 531, 541
BstHHI GCGC 1 cut(s) 607
BstKTI GATC 2 cut(s) 243, 334
BstMAI GTCTC 2 cut(s) 242, 549
BstMBI GATC 2 cut(s) 240, 331
BstMWI GCNNNNNNNGC 2 cut(s) 278, 586
BstSFI CTRYAG 1 cut(s) 139
BstV1I GCAGC 1 cut(s) 10
BstV2I GAAGAC 1 cut(s) 413
BstX2I RGATCY 1 cut(s) 240
BstYI RGATCY 1 cut(s) 240
BsuRI GGCC 1 cut(s) 221
BtgI CCRYGG 1 cut(s) 450
BtgZI GCGATG 1 cut(s) 41
BtsCI GGATG 4 cut(s) 263, 381, 531, 541
BtsI GCAGTG 1 cut(s) 136
BtsIMutI CAGTG 1 cut(s) 136
Cac8I GCNNGC 2 cut(s) 301, 519
CfoI GCGC 1 cut(s) 607
Csp6I GTAC 1 cut(s) 149
CviAII CATG 4 cut(s) 295, 403, 424, 451
CviJI RGCY 9 cut(s) 23, 50, 162, 221, 281, 299, 428, 580, 589
CviKI_1 RGCY 9 cut(s) 23, 50, 162, 221, 281, 299, 428, 580, 589
CviQI GTAC 1 cut(s) 149
DdeI CTNAG 1 cut(s) 45
DpnI GATC 2 cut(s) 242, 333
DpnII GATC 2 cut(s) 240, 331
Eam1104I CTCTTC 1 cut(s) 614
EarI CTCTTC 1 cut(s) 614
Eco130I CCWWGG 1 cut(s) 450
EcoT14I CCWWGG 1 cut(s) 450
EcoT22I ATGCAT 1 cut(s) 263
ErhI CCWWGG 1 cut(s) 450
FaeI CATG 4 cut(s) 298, 406, 427, 454
FatI CATG 4 cut(s) 294, 402, 423, 450
Fnu4HI GCNGC 1 cut(s) 24
FokI GGATG 4 cut(s) 270, 388, 538, 548
Fsp4HI GCNGC 1 cut(s) 24
FspBI CTAG 1 cut(s) 282
GlaI GCGC 1 cut(s) 606
GluI GCNGC 1 cut(s) 24
HaeIII GGCC 1 cut(s) 221
HhaI GCGC 1 cut(s) 607
Hin1II CATG 4 cut(s) 298, 406, 427, 454
Hin6I GCGC 1 cut(s) 605
HinP1I GCGC 1 cut(s) 605
HindIII AAGCTT 2 cut(s) 578, 587
Hpy166II GTNNAC 2 cut(s) 59, 447
Hpy188III TCNNGA 1 cut(s) 417
Hpy8I GTNNAC 2 cut(s) 59, 447
HpyAV CCTTC 3 cut(s) 191, 365, 574
HpyCH4III ACNGT 2 cut(s) 412, 439
HpyCH4V TGCA 7 cut(s) 130, 141, 261, 266, 339, 360, 367
HpyF10VI GCNNNNNNNGC 2 cut(s) 278, 586
HpyF3I CTNAG 1 cut(s) 45
Hsp92II CATG 4 cut(s) 298, 406, 427, 454
HspAI GCGC 1 cut(s) 605
Kzo9I GATC 2 cut(s) 240, 331
LguI GCTCTTC 1 cut(s) 614
LpnPI CCDG 6 cut(s) 240, 258, 339, 402, 518, 531
Lsp1109I GCAGC 1 cut(s) 10
LweI GCATC 2 cut(s) 31, 248
MaeI CTAG 1 cut(s) 282
MaeIII GTNAC 3 cut(s) 103, 164, 184
MalI GATC 2 cut(s) 242, 333
MboI GATC 2 cut(s) 240, 331
MboII GAAGA 3 cut(s) 65, 418, 601
MflI RGATCY 1 cut(s) 240
MluCI AATT 4 cut(s) 225, 455, 541, 597
MnlI CCTC 7 cut(s) 12, 91, 94, 232, 357, 373, 413
Mph1103I ATGCAT 1 cut(s) 263
MseI TTAA 3 cut(s) 582, 591, 596
MspCI CTTAAG 2 cut(s) 581, 590
MwoI GCNNNNNNNGC 2 cut(s) 278, 586
NcoI CCATGG 1 cut(s) 450
NdeII GATC 2 cut(s) 240, 331
NlaIII CATG 4 cut(s) 298, 406, 427, 454
NmuCI GTSAC 2 cut(s) 164, 184
NsiI ATGCAT 1 cut(s) 263
PciSI GCTCTTC 1 cut(s) 614
PkrI GCNGC 1 cut(s) 25
PsiI TTATAA 1 cut(s) 230
PstI CTGCAG 1 cut(s) 143
PsuI RGATCY 1 cut(s) 240
RsaI GTAC 1 cut(s) 150
RsaNI GTAC 1 cut(s) 149
SapI GCTCTTC 1 cut(s) 614
SaqAI TTAA 3 cut(s) 582, 591, 596
SatI GCNGC 1 cut(s) 24
Sau3AI GATC 2 cut(s) 240, 331
SetI ASST 7 cut(s) 66, 105, 164, 283, 359, 582, 591
SfaNI GCATC 2 cut(s) 31, 248
SfcI CTRYAG 1 cut(s) 139
SmlI CTYRAG 2 cut(s) 581, 590
SmoI CTYRAG 2 cut(s) 581, 590
Sse9I AATT 4 cut(s) 225, 455, 541, 597
SspMI CTAG 1 cut(s) 282
StyI CCWWGG 1 cut(s) 450
TaaI ACNGT 2 cut(s) 412, 439
TasI AATT 4 cut(s) 225, 455, 541, 597
TatI WGTACW 1 cut(s) 148
Tru1I TTAA 3 cut(s) 582, 591, 596
Tru9I TTAA 3 cut(s) 582, 591, 596
TscAI CASTG 1 cut(s) 143
TseFI GTSAC 2 cut(s) 164, 184
TseI GCWGC 1 cut(s) 23
Tsp45I GTSAC 2 cut(s) 164, 184
TspDTI ATGAA 3 cut(s) 419, 503, 601
TspGWI ACGGA 1 cut(s) 432
TspRI CASTG 1 cut(s) 143
Vha464I CTTAAG 2 cut(s) 581, 590
XapI RAATTY 1 cut(s) 455
XspI CTAG 1 cut(s) 282
Zsp2I ATGCAT 1 cut(s) 263
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.