FvH4_1g18590

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000319
Physical Location & Seq
Forward (+)
10923478 .. 10927172
3695 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g18590.t2

Sequence Viewer

Length: 1788 bp
ATGGAGATCATCAATGCCATGGATCCTTCGCTGTATAAGGCAGCAGCATCCGGTGATATTCGTTTTCTCAGAGAAGTTAGAGCTGGGAATAGACCAGTTGACATTCTCTTGCTGAAGACCCCAAAAGGCAACAACGCTCTTCATATAGCTGCTCAGTTCAAGCATACAAATTTCTTCAAGCAATTCCCAAAGCACCTTCAATCTTCGTTGGTTTGGGCCACCAACATCAAGGATGACACTCCCCTGCACATTGCTGCTAGGGTAGGTTGTGTTGAATTAGTTGAGTTCCTCATCGATCACGCAAGAGAGTTAAAGATTGATGCAGCAGATGTGGAGACCGGACCAGCCGATGCTGAAGCTTATAAAGAGTTACTTCGAATGACTAATTCGGATAAAGATACAGCTTTGCATGTTGCTGTCAAATCCGGGCACCATGATGTTGTGATATTGTTAATGGATGCCGATCCAGAATTGAGCTGTTATACCAATAACGCAAACGAATCTCCTTTGTTCTTAGCTGTCAGCAAGGGGTTTCCGAAAATTGGTTCTTGTATTTTGGACAAGTCTCCGGCATCTCTTTCTTTCAAGGGGGTTAAAGGTGTCACAGCTTTGCATTCTGCAGTAACCCGCAATTCAACCTGCAAAGATATTGTGAAGCTCATGGTGTCCAAAAATCCTCAAATAATCAAAGAAGCTGATGAACTTGGTTGGACTCCCTTACACTATGCAGCATTCAAAGGGAATGTTGAAGCAATTAGACTACTGATAGAATGCGCCAGTTCTGTGGCTTACATCTTAGACAAATGTGGAATGTCTGCTCTTCATGTTGCGGCCCACGCAGGCCGCATAAAAGCAATGAAAGAGTTAATTCGATTACGGCCGGATACCTGTGATTTGCTCAACCACAAAGGCCAAACGGTTCTTCATGCTGCTGTTTTGGGTGACAAGCGGCTTGTGATCAAGTATATTTTGAAGACGCGTGAGCTAGCAGGACTTGCAAACGTAGCAGACAATGAGGGAAATACTCCTTTGCATCTGGCTGCCTATAAACAACGTCCCTTCATTATGAGAGTCTTGGCGAGGGACCCTAGAGTTGACAAGACTGCAACTAATGATCATCATTCGAAAGCCACTGACATATTCCTTGGCGACAGTATTGAGCTGGACACCTTTGGTAGGTACACAGTCTTGCGAGTTCTCGGGAGGTCTATCGGTGTGCCAATTTTCCAGCGATCTGTCCGCCGTGACTTTATGAAATTAGAATCATCAGAGGAGGAGAATGCTAACCCCACCGCAACGACCATTCCAAACGAAAGAGCTGTCAAAACTTTGCTTGACGACTCAAAAAAATTTGACACAAATCTACTAGTTGCGGTGCTCATTGCTACCGTCACTTTTTCAGCACCTCTGACCATGCCCGGAGGTTTCCATAGCAACGGAGAGGCGATTCTACACCGAAGGCTATTTTTCATATTGTTCGTCTTATTTGACACCATCTCCTTCCTCTTATCACTCTTTGTGGTGTATAATCATTTTATGTTGTCAAATGAGTCACGAGTCATTCTAGCCACGCCTTCAGATTATATTCGCTATTCCATTGCATCAATGGTGGTAGCATTTGCTTCGGGTGTGTTTGTAATGCTACCCAAGTACAGTCCACTCGGCATTTTGGTCATTGTGATGTGCATCGTTTTATGCTTCTTCATCCTCATAAGGATGAGGTTTGCCAATCCACCAACTAGGCGAGAAATGAAGAGACGCATTTGGCTCCGTTCCCGCATAATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

596

Amino Acids

66.24

Weight (kDa)

9.24

Isoelectric Point (pI)

33.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 12 - 102 3.5e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 121 - 186 2e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 199 - 259 5.5e-11 Ankyrin repeats (3 copies)
Ank_4 PF13637 204 - 256 3.2e-08 Ankyrin repeats (many copies)
Ank_2 PF12796 216 - 291 1.9e-12 Ankyrin repeats (3 copies)
Ank PF00023 236 - 259 4.6e-06 Ankyrin repeat
Ank_2 PF12796 265 - 325 9.4e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 274 - 369 3.9e-12 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000319)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18590 FvH4_1g18590 FvH4_3g16140 FvH4_3g16141 FvH4_3g16160
malus_domestica MD02G1193600.v1.1 MD04G1020900.v1.1 MD04G1021000.v1.1 MD05G1212100.v1.1 MD05G1212300.v1.1 MD05G1213100.v1.1 MD05G1213400.v1.1 MD10G1197300.v1.1
prunus_persica Prupe.4G144500_v2.0.a1 Prupe.4G144600_v2.0.a1 Prupe.4G144800_v2.0.a1 Prupe.4G144900_v2.0.a1 Prupe.4G145100_v2.0.a1 Prupe.4G145300_v2.0.a1
pyrus_communis pycom02g15730 pycom02g15740 pycom05g19670 pycom05g19680 pycom10g17020 pycom11g27250
rosa_chinensis RchiOBHm_Chr2g0109301 RchiOBHm_Chr2g0109321 RchiOBHm_Chr2g0109341 RchiOBHm_Chr2g0109381 RchiOBHm_Chr3g0482301 RchiOBHm_Chr5g0027111 RchiOBHm_Chr5g0027121 RchiOBHm_Chr5g0027141 RchiOBHm_Chr5g0027181 RchiOBHm_Chr5g0027241
rosa_laevigata RLG00000017731 RLG00000017732 RLG00000032990 RLG00000032992 RLG00000032993 RLG00000032995 RLG00000032997 RLG00000033002
rosa_multiflora Rmu_sc0000135.1_g000002 Rmu_sc0000332.1_g000010 Rmu_sc0000882.1_g000028 Rmu_sc0000882.1_g000032 Rmu_sc0000882.1_g000033 Rmu_sc0000882.1_g000039 Rmu_sc0000882.1_g000043 Rmu_sc0000882.1_g000046 Rmu_sc0006065.1_g000003 Rmu_sc0006065.1_g000012 Rmu_sc0006065.1_g000018 Rmu_sc0006065.1_g000019 Rmu_sc0006065.1_g000022 Rmu_sc0007497.1_g000002 Rmu_sc0013610.1_g000011 Rmu_sc0015338.1_g000006 Rmu_ssc0000357.1_g000035
rosa_roxburghii Rroxscaffold_1G00052250 Rroxscaffold_1G00052280 Rroxscaffold_1G00052290 Rroxscaffold_1G00052310 Rroxscaffold_1G00052330 Rroxscaffold_1G00052360 Rroxscaffold_1G00052380 Rroxscaffold_1G00052390 Rroxscaffold_2G00134310 Rroxscaffold_2G00134330
rosa_rugosa Rorug02G0159400 Rorug05G0097300 Rorug05G0097500 Rorug05G0097600 Rorug05G0097700 Rorug05G0097700 Rorug05G0097700 Rorug05G0122900
rosa_samantha Rh2AG210900 Rh2AG211200 Rh2AG211500 Rh2BG221200 Rh2BG221800 Rh2CG213100 Rh2CG213200 Rh2CG213600 Rh3CG277900 Rh3CG278000 Rh3CG278600 Rh3DG274600 Rh5BG188600 Rh5BG188700 Rh5BG188900 Rh5BG189100 Rh5BG189200 Rh5BG189400 Rh5CG208400 Rh5CG208500 Rh5CG208700 Rh5CG209000 Rh5CG209100 Rh5CG209400 Rh5CG209700 Rh5CG209800 Rh5CG209900 Rh5CG210000 Rh5DG190500 Rh5DG190700 Rh5DG191200 Rh5DG191500
rosa_wichuraiana Rw3G022160 Rw5G017410 Rw5G017420 Rw5G017450 Rw5G017460 Rw5G017470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 363
Acc36I ACCTGC 1 cut(s) 647
AccB1I GGYRCC 1 cut(s) 429
AccII CGCG 1 cut(s) 979
AciI CCGC 8 cut(s) 628, 830, 844, 949, 1240, 1293, 1373, 1777
AclWI GGATC 3 cut(s) 17, 30, 458
AcoI YGGCCR 1 cut(s) 878
AcsI RAATTY 2 cut(s) 169, 1349
AcuI CTGAAG 3 cut(s) 134, 375, 1560
AfaI GTAC 2 cut(s) 1181, 1652
AfiI CCNNNNNNNGG 2 cut(s) 542, 1176
AflIII ACRYGT 1 cut(s) 977
AgsI TTSAA 9 cut(s) 160, 178, 200, 275, 586, 636, 736, 749, 973
AhlI ACTAGT 1 cut(s) 1366
AjuI GAANNNNNNNTTGG 2 cut(s) 906, 938
Alw21I GWGCWC 1 cut(s) 1380
Alw26I GTCTC 3 cut(s) 329, 570, 1750
AlwI GGATC 3 cut(s) 17, 30, 458
Ama87I CYCGRG 1 cut(s) 1199
AoxI GGCC 5 cut(s) 216, 831, 841, 878, 910
ApeKI GCWGC 8 cut(s) 41, 44, 149, 254, 323, 728, 929, 1040
ApoI RAATTY 2 cut(s) 169, 1349
ArsI GACNNNNNNTTYG 2 cut(s) 1305, 1337
AspLEI GCGC 1 cut(s) 776
AspS9I GGNCC 4 cut(s) 216, 341, 832, 1084
AsuC2I CCSGG 2 cut(s) 427, 1419
AsuHPI GGTGA 2 cut(s) 65, 953
AsuII TTCGAA 2 cut(s) 376, 1124
AsuNHI GCTAGC 1 cut(s) 985
AvaI CYCGRG 1 cut(s) 1199
AvaII GGWCC 2 cut(s) 341, 1084
BaeGI GKGCMC 1 cut(s) 432
BamHI GGATCC 1 cut(s) 22
BanI GGYRCC 1 cut(s) 429
BauI CACGAG 1 cut(s) 1554
BbsI GAAGAC 2 cut(s) 122, 980
Bbv12I GWGCWC 1 cut(s) 1380
BbvI GCAGC 8 cut(s) 53, 56, 136, 241, 335, 740, 916, 1027
BccI CCATC 1 cut(s) 1502
BceAI ACGGC 2 cut(s) 893, 1227
BcgI CGANNNNNNTGC 2 cut(s) 1605, 1639
BciVI GTATCC 1 cut(s) 877
BclI TGATCA 2 cut(s) 957, 1114
BcnI CCSGG 2 cut(s) 427, 1419
BcoDI GTCTC 3 cut(s) 329, 570, 1750
BcuI ACTAGT 1 cut(s) 1366
BfaI CTAG 6 cut(s) 258, 986, 1089, 1367, 1565, 1740
BfmI CTRYAG 1 cut(s) 618
BfuAI ACCTGC 1 cut(s) 647
BfuI GTATCC 1 cut(s) 877
Bme1390I CCNGG 2 cut(s) 427, 1419
Bme18I GGWCC 2 cut(s) 341, 1084
BmeT110I CYCGRG 1 cut(s) 1199
BmgT120I GGNCC 4 cut(s) 216, 341, 832, 1084
BmiI GGNNCC 5 cut(s) 24, 431, 1085, 1086, 1769
BmrFI CCNGG 2 cut(s) 427, 1419
BmsI GCATC 8 cut(s) 56, 310, 340, 448, 581, 1042, 1610, 1695
BmtI GCTAGC 1 cut(s) 989
BpiI GAAGAC 2 cut(s) 122, 980
Bpu14I TTCGAA 2 cut(s) 376, 1124
BpuMI CCSGG 2 cut(s) 427, 1419
Bsa29I ATCGAT 1 cut(s) 294
BsaBI GATNNNNATC 2 cut(s) 462, 1685
BsaI GGTCTC 1 cut(s) 329
BsaJI CCNNGG 2 cut(s) 18, 1144
BsaWI WCCGGW 2 cut(s) 50, 338
BsaXI ACNNNNNCTCC 2 cut(s) 1481, 1511
Bsc4I CCNNNNNNNGG 2 cut(s) 542, 1176
Bse1I ACTGG 2 cut(s) 95, 777
Bse3DI GCAATG 4 cut(s) 249, 861, 1380, 1596
Bse8I GATNNNNATC 2 cut(s) 462, 1685
BseCI ATCGAT 1 cut(s) 294
BseDI CCNNGG 2 cut(s) 18, 1144
BseGI GGATG 5 cut(s) 47, 238, 463, 1704, 1722
BseJI GATNNNNATC 2 cut(s) 462, 1685
BseLI CCNNNNNNNGG 2 cut(s) 542, 1176
BseMI GCAATG 4 cut(s) 249, 861, 1380, 1596
BseMII CTCAG 2 cut(s) 82, 167
BseNI ACTGG 2 cut(s) 95, 777
BseRI GAGGAG 2 cut(s) 1286, 1289
BseSI GKGCMC 1 cut(s) 432
BseX3I CGGCCG 1 cut(s) 878
BseXI GCAGC 8 cut(s) 53, 56, 136, 241, 335, 740, 916, 1027
BseYI CCCAGC 1 cut(s) 83
BsgI GTGCAG 1 cut(s) 230
Bsh1236I CGCG 1 cut(s) 979
Bsh1285I CGRYCG 1 cut(s) 881
BshFI GGCC 5 cut(s) 218, 833, 843, 880, 912
BshNI GGYRCC 1 cut(s) 429
BshVI ATCGAT 1 cut(s) 294
BsiEI CGRYCG 1 cut(s) 881
BsiHKAI GWGCWC 1 cut(s) 1380
BsiHKCI CYCGRG 1 cut(s) 1199
BsiSI CCGG 6 cut(s) 51, 339, 426, 569, 881, 1419
BslFI GGGAC 2 cut(s) 1041, 1097
BslI CCNNNNNNNGG 2 cut(s) 542, 1176
BsmAI GTCTC 3 cut(s) 329, 570, 1750
BsmBI CGTCTC 1 cut(s) 1750
BsmFI GGGAC 2 cut(s) 1041, 1097
BsmI GAATGC 4 cut(s) 613, 731, 776, 1285
BsnI GGCC 5 cut(s) 218, 833, 843, 880, 912
Bso31I GGTCTC 1 cut(s) 329
BsoBI CYCGRG 1 cut(s) 1199
Bsp119I TTCGAA 2 cut(s) 376, 1124
Bsp1286I GDGCHC 2 cut(s) 432, 1380
Bsp143I GATC 7 cut(s) 6, 22, 295, 463, 957, 1114, 1232
Bsp19I CCATGG 1 cut(s) 18
BspACI CCGC 8 cut(s) 628, 830, 844, 949, 1240, 1293, 1373, 1777
BspANI GGCC 5 cut(s) 218, 833, 843, 880, 912
BspCNI CTCAG 2 cut(s) 81, 166
BspDI ATCGAT 1 cut(s) 294
BspFNI CGCG 1 cut(s) 979
BspLI GGNNCC 5 cut(s) 24, 431, 1085, 1086, 1769
BspMAI CTGCAG 1 cut(s) 622
BspMI ACCTGC 1 cut(s) 647
BspOI GCTAGC 1 cut(s) 989
BspPI GGATC 3 cut(s) 17, 30, 458
BspQI GCTCTTC 2 cut(s) 144, 825
BspT104I TTCGAA 2 cut(s) 376, 1124
BspT107I GGYRCC 1 cut(s) 429
BspTNI GGTCTC 1 cut(s) 329
BsrDI GCAATG 4 cut(s) 249, 861, 1380, 1596
BsrI ACTGG 2 cut(s) 95, 777
BssECI CCNNGG 2 cut(s) 18, 1144
BssMI GATC 7 cut(s) 6, 22, 295, 463, 957, 1114, 1232
BssSI CACGAG 1 cut(s) 1554
BssT1I CCWWGG 2 cut(s) 18, 1144
Bst2BI CACGAG 1 cut(s) 1554
Bst4CI ACNGT 5 cut(s) 919, 1154, 1186, 1390, 1655
Bst6I CTCTTC 3 cut(s) 144, 825, 1748
BstAPI GCANNNNNTGC 1 cut(s) 995
BstBI TTCGAA 2 cut(s) 376, 1124
BstC8I GCNNGC 2 cut(s) 841, 987
BstDEI CTNAG 4 cut(s) 68, 153, 514, 796
BstDSI CCRYGG 1 cut(s) 18
BstENI CCTNNNNNAGG 1 cut(s) 1174
BstF5I GGATG 5 cut(s) 47, 238, 463, 1704, 1722
BstFNI CGCG 1 cut(s) 979
BstHHI GCGC 1 cut(s) 776
BstKTI GATC 7 cut(s) 9, 25, 298, 466, 960, 1117, 1235
BstMAI GTCTC 3 cut(s) 329, 570, 1750
BstMBI GATC 7 cut(s) 6, 22, 295, 463, 957, 1114, 1232
BstMCI CGRYCG 1 cut(s) 881
BstMWI GCNNNNNNNGC 3 cut(s) 836, 995, 1004
BstNSI RCATGY 1 cut(s) 413
BstSCI CCNGG 2 cut(s) 425, 1417
BstSFI CTRYAG 1 cut(s) 618
BstSLI GKGCMC 1 cut(s) 432
BstUI CGCG 1 cut(s) 979
BstV1I GCAGC 8 cut(s) 53, 56, 136, 241, 335, 740, 916, 1027
BstV2I GAAGAC 2 cut(s) 122, 980
BstX2I RGATCY 1 cut(s) 22
BstXI CCANNNNNNTGG 1 cut(s) 784
BstYI RGATCY 1 cut(s) 22
BstZI CGGCCG 1 cut(s) 878
Bsu15I ATCGAT 1 cut(s) 294
BsuI GTATCC 1 cut(s) 877
BsuRI GGCC 5 cut(s) 218, 833, 843, 880, 912
BsuTUI ATCGAT 1 cut(s) 294
BtgI CCRYGG 1 cut(s) 18
BtsCI GGATG 5 cut(s) 47, 238, 463, 1704, 1722
BtsIMutI CAGTG 1 cut(s) 1131
BveI ACCTGC 1 cut(s) 647
Cac8I GCNNGC 2 cut(s) 841, 987
CfoI GCGC 1 cut(s) 776
Cfr13I GGNCC 4 cut(s) 216, 341, 832, 1084
ClaI ATCGAT 1 cut(s) 294
CseI GACGC 2 cut(s) 985, 1767
Csp6I GTAC 2 cut(s) 1180, 1651
CviAII CATG 7 cut(s) 19, 410, 434, 661, 824, 926, 1414
CviQI GTAC 2 cut(s) 1180, 1651
DdeI CTNAG 4 cut(s) 68, 153, 514, 796
DpnI GATC 7 cut(s) 8, 24, 297, 465, 959, 1116, 1234
DpnII GATC 7 cut(s) 6, 22, 295, 463, 957, 1114, 1232
EaeI YGGCCR 1 cut(s) 878
EagI CGGCCG 1 cut(s) 878
Eam1104I CTCTTC 3 cut(s) 144, 825, 1748
EarI CTCTTC 3 cut(s) 144, 825, 1748
EciI GGCGGA 1 cut(s) 1229
EclXI CGGCCG 1 cut(s) 878
Eco130I CCWWGG 2 cut(s) 18, 1144
Eco31I GGTCTC 1 cut(s) 329
Eco47I GGWCC 2 cut(s) 341, 1084
Eco52I CGGCCG 1 cut(s) 878
Eco57I CTGAAG 3 cut(s) 134, 375, 1560
Eco88I CYCGRG 1 cut(s) 1199
EcoNI CCTNNNNNAGG 1 cut(s) 1174
EcoO109I RGGNCCY 1 cut(s) 1084
EcoT14I CCWWGG 2 cut(s) 18, 1144
ErhI CCWWGG 2 cut(s) 18, 1144
Esp3I CGTCTC 1 cut(s) 1750
FaeI CATG 7 cut(s) 22, 413, 437, 664, 827, 929, 1417
FalI AAGNNNNNCTT 2 cut(s) 357, 389
FaqI GGGAC 2 cut(s) 1041, 1097
FatI CATG 7 cut(s) 18, 409, 433, 660, 823, 925, 1413
FauI CCCGC 2 cut(s) 635, 1784
FbaI TGATCA 2 cut(s) 957, 1114
FokI GGATG 5 cut(s) 34, 245, 470, 1691, 1729
FspBI CTAG 6 cut(s) 258, 986, 1089, 1367, 1565, 1740
GlaI GCGC 1 cut(s) 775
GsaI CCCAGC 1 cut(s) 87
HaeIII GGCC 5 cut(s) 218, 833, 843, 880, 912
HapII CCGG 6 cut(s) 51, 339, 426, 569, 881, 1419
HgaI GACGC 2 cut(s) 985, 1767
HhaI GCGC 1 cut(s) 776
Hin1II CATG 7 cut(s) 22, 413, 437, 664, 827, 929, 1417
Hin6I GCGC 1 cut(s) 774
HinP1I GCGC 1 cut(s) 774
HincII GTYRAC 2 cut(s) 100, 1096
HindII GTYRAC 2 cut(s) 100, 1096
HindIII AAGCTT 1 cut(s) 357
HinfI GANTC 8 cut(s) 500, 712, 1071, 1262, 1340, 1447, 1550, 1557
HpaII CCGG 6 cut(s) 51, 339, 426, 569, 881, 1419
HphI GGTGA 2 cut(s) 65, 953
Hpy166II GTNNAC 4 cut(s) 100, 1096, 1182, 1658
Hpy188I TCNGA 6 cut(s) 71, 391, 537, 1270, 1410, 1579
Hpy188III TCNNGA 3 cut(s) 467, 1201, 1554
Hpy8I GTNNAC 4 cut(s) 100, 1096, 1182, 1658
HpyAV CCTTC 6 cut(s) 36, 206, 1069, 1452, 1510, 1584
HpyCH4III ACNGT 5 cut(s) 919, 1154, 1186, 1390, 1655
HpyCH4IV ACGT 2 cut(s) 1002, 1054
HpyF10VI GCNNNNNNNGC 3 cut(s) 836, 995, 1004
HpyF3I CTNAG 4 cut(s) 68, 153, 514, 796
HpySE526I ACGT 2 cut(s) 1002, 1054
Hsp92II CATG 7 cut(s) 22, 413, 437, 664, 827, 929, 1417
HspAI GCGC 1 cut(s) 774
KflI GGGWCCC 1 cut(s) 1084
Ksp22I TGATCA 2 cut(s) 957, 1114
Kzo9I GATC 7 cut(s) 6, 22, 295, 463, 957, 1114, 1232
LguI GCTCTTC 2 cut(s) 144, 825
LmnI GCTCC 1 cut(s) 1773
Lsp1109I GCAGC 8 cut(s) 53, 56, 136, 241, 335, 740, 916, 1027
LweI GCATC 8 cut(s) 56, 310, 340, 448, 581, 1042, 1610, 1695
MaeI CTAG 6 cut(s) 258, 986, 1089, 1367, 1565, 1740
MaeII ACGT 2 cut(s) 1002, 1054
MaeIII GTNAC 7 cut(s) 369, 601, 622, 941, 1244, 1390, 1551
MalI GATC 7 cut(s) 8, 24, 297, 465, 959, 1116, 1234
MboI GATC 7 cut(s) 6, 22, 295, 463, 957, 1114, 1232
MboII GAAGA 9 cut(s) 127, 131, 166, 195, 812, 914, 985, 1693, 1765
MflI RGATCY 1 cut(s) 22
MhlI GDGCHC 2 cut(s) 432, 1380
MluI ACGCGT 1 cut(s) 977
MlyI GAGTC 5 cut(s) 706, 1080, 1334, 1559, 1566
MmeI TCCRAC 1 cut(s) 689
MseI TTAA 5 cut(s) 311, 452, 594, 866, 1786
MslI CAYNNNNRTG 3 cut(s) 435, 1679, 1715
MspI CCGG 6 cut(s) 51, 339, 426, 569, 881, 1419
MspR9I CCNGG 2 cut(s) 427, 1419
Mva1269I GAATGC 4 cut(s) 613, 731, 776, 1285
MvnI CGCG 1 cut(s) 979
MwoI GCNNNNNNNGC 3 cut(s) 836, 995, 1004
NciI CCSGG 2 cut(s) 427, 1419
NcoI CCATGG 1 cut(s) 18
NdeII GATC 7 cut(s) 6, 22, 295, 463, 957, 1114, 1232
NheI GCTAGC 1 cut(s) 985
NlaIII CATG 7 cut(s) 22, 413, 437, 664, 827, 929, 1417
NlaIV GGNNCC 5 cut(s) 24, 431, 1085, 1086, 1769
NmeAIII GCCGAG 1 cut(s) 1641
NmuCI GTSAC 5 cut(s) 601, 941, 1244, 1390, 1551
NspI RCATGY 1 cut(s) 413
NspV TTCGAA 2 cut(s) 376, 1124
PciSI GCTCTTC 2 cut(s) 144, 825
PctI GAATGC 4 cut(s) 613, 731, 776, 1285
PfeI GAWTC 3 cut(s) 500, 1262, 1447
PleI GAGTC 5 cut(s) 706, 1079, 1334, 1558, 1565
PpsI GAGTC 5 cut(s) 706, 1079, 1334, 1558, 1565
PpuMI RGGWCCY 1 cut(s) 1084
PsiI TTATAA 1 cut(s) 363
Psp5II RGGWCCY 1 cut(s) 1084
PspFI CCCAGC 1 cut(s) 83
PspN4I GGNNCC 5 cut(s) 24, 431, 1085, 1086, 1769
PspPI GGNCC 4 cut(s) 216, 341, 832, 1084
PspPPI RGGWCCY 1 cut(s) 1084
PstI CTGCAG 1 cut(s) 622
PsuI RGATCY 1 cut(s) 22
RsaI GTAC 2 cut(s) 1181, 1652
RsaNI GTAC 2 cut(s) 1180, 1651
RseI CAYNNNNRTG 3 cut(s) 435, 1679, 1715
SapI GCTCTTC 2 cut(s) 144, 825
SaqAI TTAA 5 cut(s) 311, 452, 594, 866, 1786
Sau3AI GATC 7 cut(s) 6, 22, 295, 463, 957, 1114, 1232
Sau96I GGNCC 4 cut(s) 216, 341, 832, 1084
SchI GAGTC 5 cut(s) 706, 1080, 1334, 1559, 1566
ScrFI CCNGG 2 cut(s) 427, 1419
SduI GDGCHC 2 cut(s) 432, 1380
SfaNI GCATC 8 cut(s) 56, 310, 340, 448, 581, 1042, 1610, 1695
SfcI CTRYAG 1 cut(s) 618
SfuI TTCGAA 2 cut(s) 376, 1124
SinI GGWCC 2 cut(s) 341, 1084
SmiMI CAYNNNNRTG 3 cut(s) 435, 1679, 1715
SpeI ACTAGT 1 cut(s) 1366
SsiI CCGC 8 cut(s) 628, 830, 844, 949, 1240, 1293, 1373, 1777
SspMI CTAG 6 cut(s) 258, 986, 1089, 1367, 1565, 1740
StyD4I CCNGG 2 cut(s) 425, 1417
StyI CCWWGG 2 cut(s) 18, 1144
TaaI ACNGT 5 cut(s) 919, 1154, 1186, 1390, 1655
TaiI ACGT 2 cut(s) 1005, 1057
TaqI TCGA 4 cut(s) 294, 376, 871, 1124
TatI WGTACW 1 cut(s) 1650
TauI GCSGC 3 cut(s) 833, 846, 952
TfiI GAWTC 3 cut(s) 500, 1262, 1447
Tru1I TTAA 5 cut(s) 311, 452, 594, 866, 1786
Tru9I TTAA 5 cut(s) 311, 452, 594, 866, 1786
TscAI CASTG 1 cut(s) 1138
TseFI GTSAC 5 cut(s) 601, 941, 1244, 1390, 1551
TseI GCWGC 8 cut(s) 41, 44, 149, 254, 323, 728, 929, 1040
Tsp45I GTSAC 5 cut(s) 601, 941, 1244, 1390, 1551
TspGWI ACGGA 2 cut(s) 1452, 1760
TspRI CASTG 1 cut(s) 1138
VpaK11BI GGWCC 2 cut(s) 341, 1084
XagI CCTNNNNNAGG 1 cut(s) 1174
XapI RAATTY 2 cut(s) 169, 1349
XceI RCATGY 1 cut(s) 413
XcmI CCANNNNNNNNNTGG 1 cut(s) 1603
XspI CTAG 6 cut(s) 258, 986, 1089, 1367, 1565, 1740
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.