Rh5BG189400

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0000319
Physical Location & Seq
Forward (+)
20831122 .. 20833088
1967 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG189400.1

Sequence Viewer

Length: 1608 bp
ATGGCTATCATGTTTTGGGCAGCCAACAAAAAGGGCGACACTCCTCTGCACGTGGCCGCTAGAGTAGGCTGTGATGAAATAGTCGAGTTCCTTATCGATCAGGCGAAAGCGATGCACATAAGAGGAGCTGATGAGGAAAGCTGTCATCGAAGGCCGCTACTTCGGATGACGAATATAGAAATGGATACGGCTCTGCATGTGGCTGTGCGGTACGGTCATCTTGGAGTGGTGGTTATGTTAATGGAAGCCGATCCTGAACTGTGTTGTTTGACGAACAGGGCAGATGAATCTGTTTTGTTCTTGGCTGCTAGGAAGGGGTCTGCAGAGATTGCTCTTTATCTGTTGAACGAGTCTCGGGTGTGTCCTTGTTTTCGAGGGACCAATGGTGTGACGGCTTTGCACGCCGCTGTAACTCGCAGCAACCTCACTAGCGAAGGCATTGTGAGGACTATGGTGTCGAAAAATCCTGAGATGATTAAAAATGTCGATGCACTTGGCTGGACACCGTTACACTATGCAGCATTTAGAGGGAACCTTGAAGCGACTAGAGTGCTAATGCAATGTGATAGTTCTGCATCTTACATCTTAGACAACTCTGGGATGTCAGCTCTCCATGTCGCAGCCCATGCCGGCCACACCAAAATAATGGAGGAGCTGATTAGGCGGCGGCCTGATATTTGTGATCTGCTGAATGACAAAGACCAAACGGCTTTACATGCGGCAGTATTAGGAGCACCAGTTAATGTTGTGGAGTACATATTGAAGACGCCTAAGCTTGCGGCGATTATAAACGAAGCAGATAAAGATGGAAACACTCCTTTGCACTTGGCTGCCCTTCAGCAAAATGATAAAATCATAAAAGTTCTGTCTGGCGATCGGAGGGTGGACATGATTGCTATTAATAAGGAATTCTCGATGGCCACCGACATGTTTCTTGGTGACAATATTGGTGAACAGGAAACAATTCGCAGTGGTATGGTTTTGCACAACCTGGGGTGCTCTGTTGGCGTGCCATTTTTCCAACAACAAATCAGTCGTGACTTCGACAAATTGGAACCACTAGAGAAGGACACAGACAAGATCAGAGAAAACCAGCTGCAAGCTCCTCCGGATGATCGTAATGCCTCAGAAAGAGATGACACCAAACTACTTGTTGCAACGCTCATTGCAACTGTCACGTTTGCAGCATCTTTCACCAGCGTGCCTGGAGGATTTAAAGACAACGGAATGCCTATTTTATATGACAAGGCCGCTTTCAAAGTGTTTCAGTTTTTCAATGCAGCGTCCTTCTACATCTCAATTCTTGCAATCTATAATGAAGCAACTCCGATAACTGTGTTATCCATCCATCTACCCACACCATCAAGTCTCATTCAGTATTCCATTGGAGGAATGGTGGTTGCATTTTTTTCCGGCACATTAGCAGTGCAGCCGAGACGTAGTCACGGAAATTTGTTTGAATTTATATTTGGTACAAATTCGGTTGATATTGTGCTCACCGTAATGTGTGGCATTTTTTTAATATTAGCTATCATCCCTGTGCTGAAGTCTCTGATTCAAATACGCAGGGGAAAGAGGATCCACTGGTTTCGAAACCGTGTAATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

535

Amino Acids

59.08

Weight (kDa)

6.47

Isoelectric Point (pI)

35.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 9 - 84 9.1e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 65 - 153 4.2e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 147 - 226 3.1e-12 Ankyrin repeats (3 copies)
Ank_4 PF13637 204 - 253 1.7e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 229 - 290 1.1e-08 Ankyrin repeats (3 copies)
PGG PF13962 376 - 475 2.6e-18 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000319)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18590 FvH4_1g18590 FvH4_3g16140 FvH4_3g16141 FvH4_3g16160
malus_domestica MD02G1193600.v1.1 MD04G1020900.v1.1 MD04G1021000.v1.1 MD05G1212100.v1.1 MD05G1212300.v1.1 MD05G1213100.v1.1 MD05G1213400.v1.1 MD10G1197300.v1.1
prunus_persica Prupe.4G144500_v2.0.a1 Prupe.4G144600_v2.0.a1 Prupe.4G144800_v2.0.a1 Prupe.4G144900_v2.0.a1 Prupe.4G145100_v2.0.a1 Prupe.4G145300_v2.0.a1
pyrus_communis pycom02g15730 pycom02g15740 pycom05g19670 pycom05g19680 pycom10g17020 pycom11g27250
rosa_chinensis RchiOBHm_Chr2g0109301 RchiOBHm_Chr2g0109321 RchiOBHm_Chr2g0109341 RchiOBHm_Chr2g0109381 RchiOBHm_Chr3g0482301 RchiOBHm_Chr5g0027111 RchiOBHm_Chr5g0027121 RchiOBHm_Chr5g0027141 RchiOBHm_Chr5g0027181 RchiOBHm_Chr5g0027241
rosa_laevigata RLG00000017731 RLG00000017732 RLG00000032990 RLG00000032992 RLG00000032993 RLG00000032995 RLG00000032997 RLG00000033002
rosa_multiflora Rmu_sc0000135.1_g000002 Rmu_sc0000332.1_g000010 Rmu_sc0000882.1_g000028 Rmu_sc0000882.1_g000032 Rmu_sc0000882.1_g000033 Rmu_sc0000882.1_g000039 Rmu_sc0000882.1_g000043 Rmu_sc0000882.1_g000046 Rmu_sc0006065.1_g000003 Rmu_sc0006065.1_g000012 Rmu_sc0006065.1_g000018 Rmu_sc0006065.1_g000019 Rmu_sc0006065.1_g000022 Rmu_sc0007497.1_g000002 Rmu_sc0013610.1_g000011 Rmu_sc0015338.1_g000006 Rmu_ssc0000357.1_g000035
rosa_roxburghii Rroxscaffold_1G00052250 Rroxscaffold_1G00052280 Rroxscaffold_1G00052290 Rroxscaffold_1G00052310 Rroxscaffold_1G00052330 Rroxscaffold_1G00052360 Rroxscaffold_1G00052380 Rroxscaffold_1G00052390 Rroxscaffold_2G00134310 Rroxscaffold_2G00134330
rosa_rugosa Rorug02G0159400 Rorug05G0097300 Rorug05G0097500 Rorug05G0097600 Rorug05G0097700 Rorug05G0097700 Rorug05G0097700 Rorug05G0122900
rosa_samantha Rh2AG210900 Rh2AG211200 Rh2AG211500 Rh2BG221200 Rh2BG221800 Rh2CG213100 Rh2CG213200 Rh2CG213600 Rh3CG277900 Rh3CG278000 Rh3CG278600 Rh3DG274600 Rh5BG188600 Rh5BG188700 Rh5BG188900 Rh5BG189100 Rh5BG189200 Rh5BG189400 Rh5CG208400 Rh5CG208500 Rh5CG208700 Rh5CG209000 Rh5CG209100 Rh5CG209400 Rh5CG209700 Rh5CG209800 Rh5CG209900 Rh5CG210000 Rh5DG190500 Rh5DG190700 Rh5DG191200 Rh5DG191500
rosa_wichuraiana Rw3G022160 Rw5G017410 Rw5G017420 Rw5G017450 Rw5G017460 Rw5G017470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 788
AasI GACNNNNNNGTC 1 cut(s) 454
AccIII TCCGGA 1 cut(s) 1108
AciI CCGC 9 cut(s) 57, 155, 208, 405, 664, 667, 719, 779, 1251
AclWI GGATC 3 cut(s) 245, 1573, 1586
AcoI YGGCCR 3 cut(s) 54, 631, 918
AcsI RAATTY 4 cut(s) 908, 1450, 1460, 1477
AcuI CTGAAG 2 cut(s) 821, 1565
AcvI CACGTG 1 cut(s) 52
AcyI GRCGYC 1 cut(s) 767
AfaI GTAC 3 cut(s) 212, 755, 1474
AflIII ACRYGT 1 cut(s) 927
AgsI TTSAA 7 cut(s) 346, 539, 763, 1258, 1276, 1460, 1559
AjnI CCWGG 2 cut(s) 990, 1204
AjuI GAANNNNNNNTTGG 2 cut(s) 1452, 1484
AleI CACNNNNGTG 1 cut(s) 1199
AluBI AGCT 8 cut(s) 128, 141, 608, 655, 775, 1096, 1103, 1529
AluI AGCT 8 cut(s) 128, 141, 608, 655, 775, 1096, 1103, 1529
Alw21I GWGCWC 3 cut(s) 736, 1001, 1497
Alw26I GTCTC 4 cut(s) 357, 1373, 1429, 1554
AlwI GGATC 3 cut(s) 245, 1573, 1586
Ama87I CYCGRG 1 cut(s) 354
Aor13HI TCCGGA 1 cut(s) 1108
AoxI GGCC 6 cut(s) 54, 152, 631, 668, 918, 1248
ApoI RAATTY 4 cut(s) 908, 1450, 1460, 1477
AseI ATTAAT 1 cut(s) 900
Asp700I GAANNNNTTC 1 cut(s) 963
AspS9I GGNCC 1 cut(s) 378
AsuHPI GGTGA 4 cut(s) 950, 962, 1186, 1489
AsuII TTCGAA 1 cut(s) 1591
AvaI CYCGRG 1 cut(s) 354
AvaII GGWCC 1 cut(s) 378
BalI TGGCCA 1 cut(s) 920
BamHI GGATCC 1 cut(s) 1578
BbrPI CACGTG 1 cut(s) 52
BbsI GAAGAC 1 cut(s) 770
Bbv12I GWGCWC 3 cut(s) 736, 1001, 1497
BccI CCATC 5 cut(s) 800, 910, 1352, 1356, 1369
BceAI ACGGC 3 cut(s) 204, 408, 723
BcgI CGANNNNNNTGC 4 cut(s) 94, 128, 532, 566
BciT130I CCWGG 2 cut(s) 992, 1206
BciVI GTATCC 1 cut(s) 178
BcoDI GTCTC 4 cut(s) 357, 1373, 1429, 1554
BfaI CTAG 5 cut(s) 60, 309, 429, 546, 1061
BfmI CTRYAG 1 cut(s) 321
BfuI GTATCC 1 cut(s) 178
Bme1390I CCNGG 2 cut(s) 992, 1206
Bme18I GGWCC 1 cut(s) 378
BmeT110I CYCGRG 1 cut(s) 354
BmgT120I GGNCC 1 cut(s) 378
BmiI GGNNCC 4 cut(s) 379, 533, 1056, 1580
BmrFI CCNGG 2 cut(s) 992, 1206
BmsI GCATC 4 cut(s) 102, 478, 584, 1196
BpiI GAAGAC 1 cut(s) 770
BpmI CTGGAG 1 cut(s) 1227
Bpu10I CCTNAGC 1 cut(s) 771
Bpu14I TTCGAA 1 cut(s) 1591
Bsa29I ATCGAT 1 cut(s) 96
BsaAI YACGTR 1 cut(s) 52
BsaHI GRCGYC 1 cut(s) 767
BsaJI CCNNGG 1 cut(s) 991
BsaWI WCCGGW 1 cut(s) 1108
BsaXI ACNNNNNCTCC 6 cut(s) 216, 246, 723, 753, 1380, 1410
Bse118I RCCGGY 1 cut(s) 629
Bse1I ACTGG 2 cut(s) 737, 1589
Bse3DI GCAATG 2 cut(s) 566, 1164
BseAI TCCGGA 1 cut(s) 1108
BseBI CCWGG 2 cut(s) 992, 1206
BseCI ATCGAT 1 cut(s) 96
BseDI CCNNGG 1 cut(s) 991
BseGI GGATG 5 cut(s) 171, 606, 1117, 1344, 1533
BseMI GCAATG 2 cut(s) 566, 1164
BseMII CTCAG 2 cut(s) 459, 1140
BseNI ACTGG 2 cut(s) 737, 1589
BseRI GAGGAG 4 cut(s) 33, 138, 665, 1095
BsgI GTGCAG 2 cut(s) 32, 1448
Bsh1285I CGRYCG 1 cut(s) 877
BshFI GGCC 6 cut(s) 56, 154, 633, 670, 920, 1250
BshVI ATCGAT 1 cut(s) 96
BsiEI CGRYCG 1 cut(s) 877
BsiHKAI GWGCWC 3 cut(s) 736, 1001, 1497
BsiHKCI CYCGRG 1 cut(s) 354
BsiSI CCGG 3 cut(s) 630, 1109, 1413
BslFI GGGAC 1 cut(s) 391
BsmAI GTCTC 4 cut(s) 357, 1373, 1429, 1554
BsmBI CGTCTC 1 cut(s) 1429
BsmFI GGGAC 1 cut(s) 391
BsmI GAATGC 1 cut(s) 1233
BsnI GGCC 6 cut(s) 56, 154, 633, 670, 920, 1250
BsoBI CYCGRG 1 cut(s) 354
Bsp119I TTCGAA 1 cut(s) 1591
Bsp1286I GDGCHC 3 cut(s) 736, 1001, 1497
Bsp13I TCCGGA 1 cut(s) 1108
Bsp143I GATC 7 cut(s) 97, 250, 682, 874, 1080, 1114, 1578
BspACI CCGC 9 cut(s) 57, 155, 208, 405, 664, 667, 719, 779, 1251
BspANI GGCC 6 cut(s) 56, 154, 633, 670, 920, 1250
BspCNI CTCAG 2 cut(s) 460, 1139
BspDI ATCGAT 1 cut(s) 96
BspEI TCCGGA 1 cut(s) 1108
BspLI GGNNCC 4 cut(s) 379, 533, 1056, 1580
BspMAI CTGCAG 1 cut(s) 325
BspPI GGATC 3 cut(s) 245, 1573, 1586
BspT104I TTCGAA 1 cut(s) 1591
BsrDI GCAATG 2 cut(s) 566, 1164
BsrFI RCCGGY 1 cut(s) 629
BsrI ACTGG 2 cut(s) 737, 1589
BssAI RCCGGY 1 cut(s) 629
BssECI CCNNGG 1 cut(s) 991
BssMI GATC 7 cut(s) 97, 250, 682, 874, 1080, 1114, 1578
BssNI GRCGYC 1 cut(s) 767
Bst2UI CCWGG 2 cut(s) 992, 1206
Bst4CI ACNGT 7 cut(s) 215, 261, 507, 1174, 1336, 1501, 1598
BstACI GRCGYC 1 cut(s) 767
BstAPI GCANNNNNTGC 2 cut(s) 329, 626
BstBAI YACGTR 1 cut(s) 52
BstBI TTCGAA 1 cut(s) 1591
BstC8I GCNNGC 6 cut(s) 402, 631, 777, 1010, 1101, 1202
BstDEI CTNAG 4 cut(s) 468, 586, 771, 1126
BstF5I GGATG 5 cut(s) 171, 606, 1117, 1344, 1533
BstKTI GATC 7 cut(s) 100, 253, 685, 877, 1083, 1117, 1581
BstMAI GTCTC 4 cut(s) 357, 1373, 1429, 1554
BstMBI GATC 7 cut(s) 97, 250, 682, 874, 1080, 1114, 1578
BstMCI CGRYCG 1 cut(s) 877
BstMWI GCNNNNNNNGC 6 cut(s) 329, 401, 626, 661, 716, 1005
BstNI CCWGG 2 cut(s) 992, 1206
BstNSI RCATGY 3 cut(s) 200, 719, 931
BstSCI CCNGG 2 cut(s) 990, 1204
BstSFI CTRYAG 1 cut(s) 321
BstV2I GAAGAC 1 cut(s) 770
BstX2I RGATCY 1 cut(s) 1578
BstXI CCANNNNNNTGG 1 cut(s) 646
BstYI RGATCY 1 cut(s) 1578
Bsu15I ATCGAT 1 cut(s) 96
BsuI GTATCC 1 cut(s) 178
BsuRI GGCC 6 cut(s) 56, 154, 633, 670, 920, 1250
BsuTUI ATCGAT 1 cut(s) 96
BtgZI GCGATG 1 cut(s) 125
BtsCI GGATG 5 cut(s) 171, 606, 1117, 1344, 1533
BtsI GCAGTG 2 cut(s) 976, 1431
BtsIMutI CAGTG 3 cut(s) 976, 1431, 1582
Cac8I GCNNGC 6 cut(s) 402, 631, 777, 1010, 1101, 1202
Cfr10I RCCGGY 1 cut(s) 629
Cfr13I GGNCC 1 cut(s) 378
ClaI ATCGAT 1 cut(s) 96
CseI GACGC 2 cut(s) 775, 1272
Csp6I GTAC 3 cut(s) 211, 754, 1473
CviAII CATG 7 cut(s) 10, 197, 614, 626, 716, 889, 928
CviQI GTAC 3 cut(s) 211, 754, 1473
DdeI CTNAG 4 cut(s) 468, 586, 771, 1126
DpnI GATC 7 cut(s) 99, 252, 684, 876, 1082, 1116, 1580
DpnII GATC 7 cut(s) 97, 250, 682, 874, 1080, 1114, 1578
DraI TTTAAA 1 cut(s) 1216
DrdI GACNNNNNNGTC 1 cut(s) 454
DseDI GACNNNNNNGTC 1 cut(s) 454
EaeI YGGCCR 3 cut(s) 54, 631, 918
Eco47I GGWCC 1 cut(s) 378
Eco57I CTGAAG 2 cut(s) 821, 1565
Eco72I CACGTG 1 cut(s) 52
Eco88I CYCGRG 1 cut(s) 354
EcoRI GAATTC 1 cut(s) 908
EcoRII CCWGG 2 cut(s) 990, 1204
Esp3I CGTCTC 1 cut(s) 1429
FaeI CATG 7 cut(s) 13, 200, 617, 629, 719, 892, 931
FaqI GGGAC 1 cut(s) 391
FatI CATG 7 cut(s) 9, 196, 613, 625, 715, 888, 927
FokI GGATG 5 cut(s) 178, 613, 1124, 1331, 1520
FspBI CTAG 5 cut(s) 60, 309, 429, 546, 1061
GsuI CTGGAG 1 cut(s) 1227
HaeIII GGCC 6 cut(s) 56, 154, 633, 670, 920, 1250
HapII CCGG 3 cut(s) 630, 1109, 1413
HgaI GACGC 2 cut(s) 775, 1272
Hin1I GRCGYC 1 cut(s) 767
Hin1II CATG 7 cut(s) 13, 200, 617, 629, 719, 892, 931
HindIII AAGCTT 1 cut(s) 773
HinfI GANTC 3 cut(s) 287, 350, 1555
HpaII CCGG 3 cut(s) 630, 1109, 1413
HphI GGTGA 4 cut(s) 950, 962, 1186, 1489
Hpy166II GTNNAC 2 cut(s) 886, 953
Hpy188I TCNGA 6 cut(s) 165, 879, 1085, 1129, 1329, 1554
Hpy188III TCNNGA 5 cut(s) 254, 467, 913, 1037, 1109
Hpy8I GTNNAC 2 cut(s) 886, 953
HpyAV CCTTC 6 cut(s) 144, 307, 428, 845, 1060, 1297
HpyCH4III ACNGT 7 cut(s) 215, 261, 507, 1174, 1336, 1501, 1598
HpyCH4IV ACGT 3 cut(s) 51, 1178, 1438
HpyF10VI GCNNNNNNNGC 6 cut(s) 329, 401, 626, 661, 716, 1005
HpyF3I CTNAG 4 cut(s) 468, 586, 771, 1126
HpySE526I ACGT 3 cut(s) 51, 1178, 1438
Hsp92I GRCGYC 1 cut(s) 767
Hsp92II CATG 7 cut(s) 13, 200, 617, 629, 719, 892, 931
Kpn2I TCCGGA 1 cut(s) 1108
KroI GCCGGC 1 cut(s) 629
KroNI GCCGGC 1 cut(s) 631
Kzo9I GATC 7 cut(s) 97, 250, 682, 874, 1080, 1114, 1578
LmnI GCTCC 4 cut(s) 125, 652, 731, 1108
LweI GCATC 4 cut(s) 102, 478, 584, 1196
MaeI CTAG 5 cut(s) 60, 309, 429, 546, 1061
MaeII ACGT 3 cut(s) 51, 1178, 1438
MaeIII GTNAC 7 cut(s) 388, 409, 507, 938, 1037, 1174, 1442
MalI GATC 7 cut(s) 99, 252, 684, 876, 1082, 1116, 1580
MboI GATC 7 cut(s) 97, 250, 682, 874, 1080, 1114, 1578
MboII GAAGA 1 cut(s) 775
MflI RGATCY 1 cut(s) 1578
MhlI GDGCHC 3 cut(s) 736, 1001, 1497
MlsI TGGCCA 1 cut(s) 920
MluCI AATT 8 cut(s) 908, 963, 1049, 1299, 1450, 1460, 1477, 1602
MluNI TGGCCA 1 cut(s) 920
MlyI GAGTC 1 cut(s) 359
MmeI TCCRAC 1 cut(s) 1045
Mox20I TGGCCA 1 cut(s) 920
MroI TCCGGA 1 cut(s) 1108
MroNI GCCGGC 1 cut(s) 629
MroXI GAANNNNTTC 1 cut(s) 963
MscI TGGCCA 1 cut(s) 920
MseI TTAA 7 cut(s) 239, 477, 741, 900, 1215, 1520, 1606
MslI CAYNNNNRTG 4 cut(s) 926, 1199, 1502, 1538
Msp20I TGGCCA 1 cut(s) 920
MspA1I CMGCKG 2 cut(s) 407, 1096
MspI CCGG 3 cut(s) 630, 1109, 1413
MspR9I CCNGG 2 cut(s) 992, 1206
Mva1269I GAATGC 1 cut(s) 1233
MvaI CCWGG 2 cut(s) 992, 1206
MwoI GCNNNNNNNGC 6 cut(s) 329, 401, 626, 661, 716, 1005
NaeI GCCGGC 1 cut(s) 631
NdeII GATC 7 cut(s) 97, 250, 682, 874, 1080, 1114, 1578
NgoMIV GCCGGC 1 cut(s) 629
NlaIII CATG 7 cut(s) 13, 200, 617, 629, 719, 892, 931
NlaIV GGNNCC 4 cut(s) 379, 533, 1056, 1580
NmeAIII GCCGAG 1 cut(s) 1458
NmuCI GTSAC 5 cut(s) 388, 938, 1037, 1174, 1442
NspI RCATGY 3 cut(s) 200, 719, 931
NspV TTCGAA 1 cut(s) 1591
OliI CACNNNNGTG 1 cut(s) 1199
PciI ACATGT 1 cut(s) 927
PctI GAATGC 1 cut(s) 1233
PdiI GCCGGC 1 cut(s) 631
PdmI GAANNNNTTC 1 cut(s) 963
PfeI GAWTC 2 cut(s) 287, 1555
PflFI GACNNNGTC 1 cut(s) 1440
Ple19I CGATCG 1 cut(s) 877
PleI GAGTC 1 cut(s) 358
PmaCI CACGTG 1 cut(s) 52
PmlI CACGTG 1 cut(s) 52
PpsI GAGTC 1 cut(s) 358
Ppu21I YACGTR 1 cut(s) 52
PscI ACATGT 1 cut(s) 927
PshBI ATTAAT 1 cut(s) 900
PsiI TTATAA 1 cut(s) 788
Psp6I CCWGG 2 cut(s) 990, 1204
PspCI CACGTG 1 cut(s) 52
PspGI CCWGG 2 cut(s) 990, 1204
PspN4I GGNNCC 4 cut(s) 379, 533, 1056, 1580
PspPI GGNCC 1 cut(s) 378
PstI CTGCAG 1 cut(s) 325
PsuI RGATCY 1 cut(s) 1578
PsyI GACNNNGTC 1 cut(s) 1440
PvuI CGATCG 1 cut(s) 877
PvuII CAGCTG 1 cut(s) 1096
RsaI GTAC 3 cut(s) 212, 755, 1474
RsaNI GTAC 3 cut(s) 211, 754, 1473
RseI CAYNNNNRTG 4 cut(s) 926, 1199, 1502, 1538
SaqAI TTAA 7 cut(s) 239, 477, 741, 900, 1215, 1520, 1606
Sau3AI GATC 7 cut(s) 97, 250, 682, 874, 1080, 1114, 1578
Sau96I GGNCC 1 cut(s) 378
SchI GAGTC 1 cut(s) 359
ScrFI CCNGG 2 cut(s) 992, 1206
SduI GDGCHC 3 cut(s) 736, 1001, 1497
SfaNI GCATC 4 cut(s) 102, 478, 584, 1196
SfcI CTRYAG 1 cut(s) 321
SfuI TTCGAA 1 cut(s) 1591
SinI GGWCC 1 cut(s) 378
SmiMI CAYNNNNRTG 4 cut(s) 926, 1199, 1502, 1538
Sse9I AATT 8 cut(s) 908, 963, 1049, 1299, 1450, 1460, 1477, 1602
SsiI CCGC 9 cut(s) 57, 155, 208, 405, 664, 667, 719, 779, 1251
SspI AATATT 2 cut(s) 946, 1524
SspMI CTAG 5 cut(s) 60, 309, 429, 546, 1061
StyD4I CCNGG 2 cut(s) 990, 1204
TaaI ACNGT 7 cut(s) 215, 261, 507, 1174, 1336, 1501, 1598
TaiI ACGT 3 cut(s) 54, 1181, 1441
TaqI TCGA 9 cut(s) 84, 96, 148, 373, 458, 486, 914, 1044, 1591
TasI AATT 8 cut(s) 908, 963, 1049, 1299, 1450, 1460, 1477, 1602
TatI WGTACW 1 cut(s) 753
TauI GCSGC 8 cut(s) 59, 157, 407, 667, 670, 722, 782, 1253
TfiI GAWTC 2 cut(s) 287, 1555
Tru1I TTAA 7 cut(s) 239, 477, 741, 900, 1215, 1520, 1606
Tru9I TTAA 7 cut(s) 239, 477, 741, 900, 1215, 1520, 1606
TscAI CASTG 3 cut(s) 976, 1431, 1589
TseFI GTSAC 5 cut(s) 388, 938, 1037, 1174, 1442
Tsp45I GTSAC 5 cut(s) 388, 938, 1037, 1174, 1442
TspDTI ATGAA 3 cut(s) 90, 300, 1332
TspGWI ACGGA 2 cut(s) 1239, 1461
TspRI CASTG 3 cut(s) 976, 1431, 1589
Tth111I GACNNNGTC 1 cut(s) 1440
VpaK11BI GGWCC 1 cut(s) 378
VspI ATTAAT 1 cut(s) 900
XapI RAATTY 4 cut(s) 908, 1450, 1460, 1477
XceI RCATGY 3 cut(s) 200, 719, 931
XcmI CCANNNNNNNNNTGG 1 cut(s) 1390
XmnI GAANNNNTTC 1 cut(s) 963
XspI CTAG 5 cut(s) 60, 309, 429, 546, 1061
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.