Rh5BG189100

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0000319
Physical Location & Seq
Forward (+)
20771746 .. 20774890
3145 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG189100.1

Sequence Viewer

Length: 1791 bp
ATGGATCCTTACCTGTATGAGGCGGCGACGCTCGGAGATGTCAGCTTCTTGAGAAGAATCAGAGACGGTGACGTATTACTAAACCACGATCTTCTCCTTCAGAAAACGCCTAAAGACAACAACATTCTACACATCGCCGCCGAATTCAAACGCAATGAATTTTTCGGACAAGTCCCGAATCACTATTCTCCAGCTCTGTTTTGGGCGGCCAACAAAAAGGGCGACACTCCTCTGCACGTGGCCGCTCGAGTAGGCTGTGATAAAATAGTCAAGTTCCTCATCGATCAGGCGAAAGCACTGCACATAAGAGGAGCTGATGAGGAAAGCTGTCATCCAAAGCCGCTGCTTCGGATGACGAATTTAGAAATGGATACGGCTCTGCATGTGGCTGTGCGGTACGGTCATCGTGAAGTGGTGGTCAGGTTAATGGAAGCCGATCCTGAACTGTGTTGTTTGACAAACAGGGCAGATGAATCGGTTTTGTTCTTGGCTGCTAGGAAGGGCTCTGCAGAGATTGCTCGTTATCTGTTGGACGAGTCACCGGTGTGTCCTTGTTTTCGAGGGACGAATGGTGTGACGGCTTTGCACGCCGCTGTAACTCGCAGCAACCTCACCAGCCAAGGCATTGTGAGGACTATGGTGTCCAAAAATCCTAAGATGATTAAAAACGTCGATGCACTTGGCTGGACACCGTTACACTATGCAGCATTTAGAGGGAACCTTGAAGCGACTAGAGTGCTAATGCAATGTGATAGTTCTGCATCTTACATCTTAGACAACTCTGGAATGTCAGCTCTCCATGTAGCATCCCATGCGGGCCACACCAAGATAATGAAAGAACTAATTCGGTGGCGGCCTGATATTTGTGATCTGCTGAATGACAAAGGCCAAACGGCTTTACATGTGGCAGTATTAGGAGCACGAATTAATGTTGTGGAGTACATATTGAAGACGCCTAAGCTTGCAGCGATTATAAACGAAGCAGATAAAGATGGCAACACTCCTTTGCACTTGGCTGCCCTTCAGCAAAATGATAAAATCATCAGAGTTCTGTCAGGCAATCGTAGAGTGGACAGGATTGCTATTAACAATGATTTCTTGAAGCCCATTGACATGTTTCTTGGTGAAAATATTGGTGAACAGGAAACAATTCGCAGTGGTATGATTTTGCACAACCTGGGGCGCTCCGTTGGGGTGCCATTTTTCCAACAAAAAATCTGTCGTGATTTCGACAAATTGGAACCACCGGACAAGCATACAGACAAGACAAGAGAAAACAAACAGCAAGCTCCTCGCGATGATAATGCCTTGAAAAGAAATGACACCAAACTACTTGTAGCAACGCTGATTGCAACCATCACATTTGCAGCTTCTTTCACCAATGTGCCTGGAGGATTTAAAGACAACGGAATGCCTGTTTTATATGACAAGGCGTCTTTCAAAGTGTTTCAGTTCTTCAATGCAGTGTCCTTCTACATCTCAATTCTTGCAATTTATAACGAATCAACTCCGATAACTATGTTATCCATCCATCTACCCACTCCATCAATTCTCATTCAGTATTCAATTGGAGGAATGGTGGTTGCATTTTTTTCGGGCACGTTAGCGGTGCAGCCGAGAAAGTACGATGGAAATTTGCTTGAATTTTTATTTGGTACAAGTTGGGTTGATATTCTGCTCGCGGTAATTTGTGGCATTTTATTAATGTTAGCCATCATCCCTGTGCTGAAGTCTCTTATTCAAATAAGCTGGGGAAAGAGGATCCACTGGCTCAGAAACCATGTAATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

596

Amino Acids

66.5

Weight (kDa)

8.83

Isoelectric Point (pI)

32.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 29 - 96 5.4e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 43 - 146 1.9e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 127 - 216 6.3e-11 Ankyrin repeats (3 copies)
Ank_2 PF12796 208 - 285 1.3e-11 Ankyrin repeats (3 copies)
Ank_4 PF13637 266 - 315 4.8e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 290 - 352 1.1e-09 Ankyrin repeats (3 copies)
PGG PF13962 438 - 536 7.4e-18 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000319)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18590 FvH4_1g18590 FvH4_3g16140 FvH4_3g16141 FvH4_3g16160
malus_domestica MD02G1193600.v1.1 MD04G1020900.v1.1 MD04G1021000.v1.1 MD05G1212100.v1.1 MD05G1212300.v1.1 MD05G1213100.v1.1 MD05G1213400.v1.1 MD10G1197300.v1.1
prunus_persica Prupe.4G144500_v2.0.a1 Prupe.4G144600_v2.0.a1 Prupe.4G144800_v2.0.a1 Prupe.4G144900_v2.0.a1 Prupe.4G145100_v2.0.a1 Prupe.4G145300_v2.0.a1
pyrus_communis pycom02g15730 pycom02g15740 pycom05g19670 pycom05g19680 pycom10g17020 pycom11g27250
rosa_chinensis RchiOBHm_Chr2g0109301 RchiOBHm_Chr2g0109321 RchiOBHm_Chr2g0109341 RchiOBHm_Chr2g0109381 RchiOBHm_Chr3g0482301 RchiOBHm_Chr5g0027111 RchiOBHm_Chr5g0027121 RchiOBHm_Chr5g0027141 RchiOBHm_Chr5g0027181 RchiOBHm_Chr5g0027241
rosa_laevigata RLG00000017731 RLG00000017732 RLG00000032990 RLG00000032992 RLG00000032993 RLG00000032995 RLG00000032997 RLG00000033002
rosa_multiflora Rmu_sc0000135.1_g000002 Rmu_sc0000332.1_g000010 Rmu_sc0000882.1_g000028 Rmu_sc0000882.1_g000032 Rmu_sc0000882.1_g000033 Rmu_sc0000882.1_g000039 Rmu_sc0000882.1_g000043 Rmu_sc0000882.1_g000046 Rmu_sc0006065.1_g000003 Rmu_sc0006065.1_g000012 Rmu_sc0006065.1_g000018 Rmu_sc0006065.1_g000019 Rmu_sc0006065.1_g000022 Rmu_sc0007497.1_g000002 Rmu_sc0013610.1_g000011 Rmu_sc0015338.1_g000006 Rmu_ssc0000357.1_g000035
rosa_roxburghii Rroxscaffold_1G00052250 Rroxscaffold_1G00052280 Rroxscaffold_1G00052290 Rroxscaffold_1G00052310 Rroxscaffold_1G00052330 Rroxscaffold_1G00052360 Rroxscaffold_1G00052380 Rroxscaffold_1G00052390 Rroxscaffold_2G00134310 Rroxscaffold_2G00134330
rosa_rugosa Rorug02G0159400 Rorug05G0097300 Rorug05G0097500 Rorug05G0097600 Rorug05G0097700 Rorug05G0097700 Rorug05G0097700 Rorug05G0122900
rosa_samantha Rh2AG210900 Rh2AG211200 Rh2AG211500 Rh2BG221200 Rh2BG221800 Rh2CG213100 Rh2CG213200 Rh2CG213600 Rh3CG277900 Rh3CG278000 Rh3CG278600 Rh3DG274600 Rh5BG188600 Rh5BG188700 Rh5BG188900 Rh5BG189100 Rh5BG189200 Rh5BG189400 Rh5CG208400 Rh5CG208500 Rh5CG208700 Rh5CG209000 Rh5CG209100 Rh5CG209400 Rh5CG209700 Rh5CG209800 Rh5CG209900 Rh5CG210000 Rh5DG190500 Rh5DG190700 Rh5DG191200 Rh5DG191500
rosa_wichuraiana Rw3G022160 Rw5G017410 Rw5G017420 Rw5G017450 Rw5G017460 Rw5G017470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 974, 1497
AasI GACNNNNNNGTC 1 cut(s) 640
AccB1I GGYRCC 1 cut(s) 1195
AccBSI CCGCTC 1 cut(s) 245
AccII CGCG 2 cut(s) 1296, 1682
AclWI GGATC 4 cut(s) 12, 431, 1756, 1769
AcoI YGGCCR 2 cut(s) 207, 240
AcsI RAATTY 5 cut(s) 143, 158, 358, 1633, 1643
AcuI CTGAAG 3 cut(s) 83, 1007, 1748
AcvI CACGTG 1 cut(s) 238
AcyI GRCGYC 2 cut(s) 953, 1433
AfaI GTAC 4 cut(s) 398, 941, 1625, 1657
AfiI CCNNNNNNNGG 1 cut(s) 19
AflIII ACRYGT 2 cut(s) 901, 1113
AgeI ACCGGT 1 cut(s) 541
AhdI GACNNNNNGTC 1 cut(s) 1432
AjnI CCWGG 2 cut(s) 1176, 1387
AjuI GAANNNNNNNTTGG 2 cut(s) 1635, 1667
AleI CACNNNNGTG 2 cut(s) 544, 1382
AluBI AGCT 9 cut(s) 45, 194, 314, 327, 794, 961, 1289, 1370, 1749
AluI AGCT 9 cut(s) 45, 194, 314, 327, 794, 961, 1289, 1370, 1749
Alw21I GWGCWC 1 cut(s) 922
Alw26I GTCTC 2 cut(s) 57, 1737
AlwI GGATC 4 cut(s) 12, 431, 1756, 1769
Ama87I CYCGRG 1 cut(s) 246
AoxI GGCC 5 cut(s) 207, 240, 817, 854, 886
ApeKI GCWGC 8 cut(s) 343, 491, 603, 704, 965, 1016, 1367, 1612
ApoI RAATTY 5 cut(s) 143, 158, 358, 1633, 1643
ArsI GACNNNNNNTTYG 2 cut(s) 1204, 1236
AseI ATTAAT 2 cut(s) 927, 1703
AsiGI ACCGGT 1 cut(s) 541
Asp700I GAANNNNTTC 2 cut(s) 843, 1149
AspLEI GCGC 1 cut(s) 1185
AspS9I GGNCC 1 cut(s) 817
AsuHPI GGTGA 6 cut(s) 80, 531, 604, 1136, 1148, 1369
AvaI CYCGRG 1 cut(s) 246
BaeGI GKGCMC 1 cut(s) 1601
BamHI GGATCC 2 cut(s) 4, 1761
BanI GGYRCC 1 cut(s) 1195
BanII GRGCYC 1 cut(s) 506
BbrPI CACGTG 1 cut(s) 238
BbsI GAAGAC 1 cut(s) 956
Bbv12I GWGCWC 1 cut(s) 922
BbvI GCAGC 8 cut(s) 330, 478, 615, 716, 977, 1003, 1379, 1624
BccI CCATC 7 cut(s) 986, 1364, 1535, 1539, 1552, 1622, 1721
BceAI ACGGC 3 cut(s) 390, 594, 909
BciT130I CCWGG 2 cut(s) 1178, 1389
BciVI GTATCC 1 cut(s) 364
BcoDI GTCTC 2 cut(s) 57, 1737
BfaI CTAG 2 cut(s) 495, 732
BfmI CTRYAG 1 cut(s) 507
BfoI RGCGCY 1 cut(s) 1186
BfuI GTATCC 1 cut(s) 364
Bme1390I CCNGG 2 cut(s) 1178, 1389
BmeRI GACNNNNNGTC 1 cut(s) 1432
BmeT110I CYCGRG 1 cut(s) 246
BmgT120I GGNCC 1 cut(s) 817
BmiI GGNNCC 5 cut(s) 6, 719, 1197, 1242, 1763
BmrFI CCNGG 2 cut(s) 1178, 1389
BmsI GCATC 3 cut(s) 664, 770, 815
BpiI GAAGAC 1 cut(s) 956
BpmI CTGGAG 2 cut(s) 174, 1410
Bpu10I CCTNAGC 1 cut(s) 957
BpuEI CTTGAG 1 cut(s) 70
Bsa29I ATCGAT 1 cut(s) 282
BsaAI YACGTR 1 cut(s) 238
BsaHI GRCGYC 2 cut(s) 953, 1433
BsaJI CCNNGG 2 cut(s) 619, 1177
BsaWI WCCGGW 2 cut(s) 541, 1246
BsaXI ACNNNNNCTCC 2 cut(s) 1563, 1593
Bsc4I CCNNNNNNNGG 1 cut(s) 19
Bse118I RCCGGY 1 cut(s) 541
Bse1I ACTGG 1 cut(s) 1772
Bse3DI GCAATG 2 cut(s) 160, 752
BseBI CCWGG 2 cut(s) 1178, 1389
BseCI ATCGAT 1 cut(s) 282
BseDI CCNNGG 2 cut(s) 619, 1177
BseGI GGATG 5 cut(s) 331, 357, 806, 1527, 1716
BseLI CCNNNNNNNGG 1 cut(s) 19
BseMI GCAATG 2 cut(s) 160, 752
BseMII CTCAG 1 cut(s) 1786
BseNI ACTGG 1 cut(s) 1772
BseRI GAGGAG 3 cut(s) 219, 324, 1281
BseSI GKGCMC 1 cut(s) 1601
BseXI GCAGC 8 cut(s) 330, 478, 615, 716, 977, 1003, 1379, 1624
BseYI CCCAGC 1 cut(s) 1749
BsgI GTGCAG 3 cut(s) 218, 284, 1631
Bsh1236I CGCG 2 cut(s) 1296, 1682
BshFI GGCC 5 cut(s) 209, 242, 819, 856, 888
BshNI GGYRCC 1 cut(s) 1195
BshTI ACCGGT 1 cut(s) 541
BshVI ATCGAT 1 cut(s) 282
BsiHKAI GWGCWC 1 cut(s) 922
BsiHKCI CYCGRG 1 cut(s) 246
BsiSI CCGG 2 cut(s) 542, 1247
BslFI GGGAC 2 cut(s) 158, 577
BslI CCNNNNNNNGG 1 cut(s) 19
BsmAI GTCTC 2 cut(s) 57, 1737
BsmBI CGTCTC 1 cut(s) 57
BsmFI GGGAC 2 cut(s) 158, 577
BsmI GAATGC 1 cut(s) 1416
BsnI GGCC 5 cut(s) 209, 242, 819, 856, 888
BsoBI CYCGRG 1 cut(s) 246
Bsp1286I GDGCHC 3 cut(s) 506, 922, 1601
Bsp143I GATC 6 cut(s) 4, 88, 283, 436, 868, 1761
Bsp68I TCGCGA 1 cut(s) 1296
BspANI GGCC 5 cut(s) 209, 242, 819, 856, 888
BspCNI CTCAG 1 cut(s) 1785
BspDI ATCGAT 1 cut(s) 282
BspFNI CGCG 2 cut(s) 1296, 1682
BspLI GGNNCC 5 cut(s) 6, 719, 1197, 1242, 1763
BspMAI CTGCAG 1 cut(s) 511
BspPI GGATC 4 cut(s) 12, 431, 1756, 1769
BspT107I GGYRCC 1 cut(s) 1195
BsrBI CCGCTC 1 cut(s) 245
BsrDI GCAATG 2 cut(s) 160, 752
BsrFI RCCGGY 1 cut(s) 541
BsrI ACTGG 1 cut(s) 1772
BssAI RCCGGY 1 cut(s) 541
BssECI CCNNGG 2 cut(s) 619, 1177
BssMI GATC 6 cut(s) 4, 88, 283, 436, 868, 1761
BssNI GRCGYC 2 cut(s) 953, 1433
BssT1I CCWWGG 1 cut(s) 619
Bst2UI CCWGG 2 cut(s) 1178, 1389
Bst4CI ACNGT 4 cut(s) 68, 401, 447, 693
BstACI GRCGYC 2 cut(s) 953, 1433
BstAPI GCANNNNNTGC 2 cut(s) 515, 812
BstBAI YACGTR 1 cut(s) 238
BstC8I GCNNGC 5 cut(s) 588, 817, 963, 1287, 1680
BstDEI CTNAG 4 cut(s) 654, 772, 957, 1772
BstENI CCTNNNNNAGG 1 cut(s) 17
BstF5I GGATG 5 cut(s) 331, 357, 806, 1527, 1716
BstFNI CGCG 2 cut(s) 1296, 1682
BstH2I RGCGCY 1 cut(s) 1186
BstHHI GCGC 1 cut(s) 1185
BstKTI GATC 6 cut(s) 7, 91, 286, 439, 871, 1764
BstMAI GTCTC 2 cut(s) 57, 1737
BstMBI GATC 6 cut(s) 4, 88, 283, 436, 868, 1761
BstMWI GCNNNNNNNGC 3 cut(s) 515, 587, 812
BstNI CCWGG 2 cut(s) 1178, 1389
BstNSI RCATGY 3 cut(s) 386, 905, 1117
BstSCI CCNGG 2 cut(s) 1176, 1387
BstSFI CTRYAG 1 cut(s) 507
BstSLI GKGCMC 1 cut(s) 1601
BstUI CGCG 2 cut(s) 1296, 1682
BstV1I GCAGC 8 cut(s) 330, 478, 615, 716, 977, 1003, 1379, 1624
BstV2I GAAGAC 1 cut(s) 956
BstX2I RGATCY 2 cut(s) 4, 1761
BstYI RGATCY 2 cut(s) 4, 1761
Bsu15I ATCGAT 1 cut(s) 282
BsuI GTATCC 1 cut(s) 364
BsuRI GGCC 5 cut(s) 209, 242, 819, 856, 888
BsuTUI ATCGAT 1 cut(s) 282
BtgZI GCGATG 2 cut(s) 118, 1311
BtsCI GGATG 5 cut(s) 331, 357, 806, 1527, 1716
BtsI GCAGTG 3 cut(s) 296, 1162, 1470
BtsIMutI CAGTG 4 cut(s) 296, 1162, 1470, 1765
BtuMI TCGCGA 1 cut(s) 1296
Cac8I GCNNGC 5 cut(s) 588, 817, 963, 1287, 1680
CfoI GCGC 1 cut(s) 1185
Cfr10I RCCGGY 1 cut(s) 541
Cfr13I GGNCC 1 cut(s) 817
ClaI ATCGAT 1 cut(s) 282
CseI GACGC 3 cut(s) 37, 961, 1422
Csp6I GTAC 4 cut(s) 397, 940, 1624, 1656
CspAI ACCGGT 1 cut(s) 541
CviAII CATG 6 cut(s) 383, 800, 812, 902, 1114, 1781
CviQI GTAC 4 cut(s) 397, 940, 1624, 1656
DdeI CTNAG 4 cut(s) 654, 772, 957, 1772
DpnI GATC 6 cut(s) 6, 90, 285, 438, 870, 1763
DpnII GATC 6 cut(s) 4, 88, 283, 436, 868, 1761
DraI TTTAAA 1 cut(s) 1399
DrdI GACNNNNNNGTC 1 cut(s) 640
DriI GACNNNNNGTC 1 cut(s) 1432
DseDI GACNNNNNNGTC 1 cut(s) 640
EaeI YGGCCR 2 cut(s) 207, 240
Eam1105I GACNNNNNGTC 1 cut(s) 1432
Eco130I CCWWGG 1 cut(s) 619
Eco24I GRGCYC 1 cut(s) 506
Eco57I CTGAAG 3 cut(s) 83, 1007, 1748
Eco72I CACGTG 1 cut(s) 238
Eco88I CYCGRG 1 cut(s) 246
EcoNI CCTNNNNNAGG 1 cut(s) 17
EcoRI GAATTC 1 cut(s) 143
EcoRII CCWGG 2 cut(s) 1176, 1387
EcoT14I CCWWGG 1 cut(s) 619
EcoT38I GRGCYC 1 cut(s) 506
ErhI CCWWGG 1 cut(s) 619
Esp3I CGTCTC 1 cut(s) 57
FaeI CATG 6 cut(s) 386, 803, 815, 905, 1117, 1784
FaqI GGGAC 2 cut(s) 158, 577
FatI CATG 6 cut(s) 382, 799, 811, 901, 1113, 1780
FauI CCCGC 1 cut(s) 808
FokI GGATG 5 cut(s) 318, 364, 793, 1514, 1703
FriOI GRGCYC 1 cut(s) 506
FspBI CTAG 2 cut(s) 495, 732
GlaI GCGC 1 cut(s) 1184
GsaI CCCAGC 1 cut(s) 1753
GsuI CTGGAG 2 cut(s) 174, 1410
HaeII RGCGCY 1 cut(s) 1186
HaeIII GGCC 5 cut(s) 209, 242, 819, 856, 888
HapII CCGG 2 cut(s) 542, 1247
HgaI GACGC 3 cut(s) 37, 961, 1422
HhaI GCGC 1 cut(s) 1185
Hin1I GRCGYC 2 cut(s) 953, 1433
Hin1II CATG 6 cut(s) 386, 803, 815, 905, 1117, 1784
Hin6I GCGC 1 cut(s) 1183
HinP1I GCGC 1 cut(s) 1183
HindIII AAGCTT 1 cut(s) 959
HinfI GANTC 5 cut(s) 57, 178, 473, 536, 1502
HpaII CCGG 2 cut(s) 542, 1247
HphI GGTGA 6 cut(s) 80, 531, 604, 1136, 1148, 1369
Hpy166II GTNNAC 2 cut(s) 1072, 1139
Hpy188I TCNGA 8 cut(s) 35, 62, 102, 167, 351, 1046, 1512, 1775
Hpy188III TCNNGA 8 cut(s) 49, 175, 407, 440, 783, 1099, 1223, 1295
Hpy8I GTNNAC 2 cut(s) 1072, 1139
Hpy99I CGWCG 2 cut(s) 31, 674
HpyAV CCTTC 4 cut(s) 107, 493, 1031, 1480
HpyCH4III ACNGT 4 cut(s) 68, 401, 447, 693
HpyCH4IV ACGT 4 cut(s) 72, 237, 669, 1601
HpyF10VI GCNNNNNNNGC 3 cut(s) 515, 587, 812
HpyF3I CTNAG 4 cut(s) 654, 772, 957, 1772
HpySE526I ACGT 4 cut(s) 72, 237, 669, 1601
Hsp92I GRCGYC 2 cut(s) 953, 1433
Hsp92II CATG 6 cut(s) 386, 803, 815, 905, 1117, 1784
HspAI GCGC 1 cut(s) 1183
Kzo9I GATC 6 cut(s) 4, 88, 283, 436, 868, 1761
LmnI GCTCC 4 cut(s) 311, 917, 1190, 1294
Lsp1109I GCAGC 8 cut(s) 330, 478, 615, 716, 977, 1003, 1379, 1624
LweI GCATC 3 cut(s) 664, 770, 815
MaeI CTAG 2 cut(s) 495, 732
MaeII ACGT 4 cut(s) 72, 237, 669, 1601
MaeIII GTNAC 5 cut(s) 68, 537, 574, 595, 693
MalI GATC 6 cut(s) 6, 90, 285, 438, 870, 1763
MbiI CCGCTC 1 cut(s) 245
MboI GATC 6 cut(s) 4, 88, 283, 436, 868, 1761
MboII GAAGA 4 cut(s) 66, 83, 961, 1447
MfeI CAATTG 1 cut(s) 1566
MflI RGATCY 2 cut(s) 4, 1761
MhlI GDGCHC 3 cut(s) 506, 922, 1601
MlyI GAGTC 1 cut(s) 545
MmeI TCCRAC 2 cut(s) 510, 1231
MroXI GAANNNNTTC 2 cut(s) 843, 1149
MseI TTAA 7 cut(s) 425, 663, 927, 1086, 1398, 1703, 1789
MslI CAYNNNNRTG 4 cut(s) 544, 1112, 1382, 1721
MspA1I CMGCKG 2 cut(s) 343, 593
MspI CCGG 2 cut(s) 542, 1247
MspR9I CCNGG 2 cut(s) 1178, 1389
MunI CAATTG 1 cut(s) 1566
Mva1269I GAATGC 1 cut(s) 1416
MvaI CCWGG 2 cut(s) 1178, 1389
MvnI CGCG 2 cut(s) 1296, 1682
MwoI GCNNNNNNNGC 3 cut(s) 515, 587, 812
NdeII GATC 6 cut(s) 4, 88, 283, 436, 868, 1761
NlaIII CATG 6 cut(s) 386, 803, 815, 905, 1117, 1784
NlaIV GGNNCC 5 cut(s) 6, 719, 1197, 1242, 1763
NmeAIII GCCGAG 1 cut(s) 1641
NmuCI GTSAC 3 cut(s) 68, 537, 574
NruI TCGCGA 1 cut(s) 1296
NspI RCATGY 3 cut(s) 386, 905, 1117
OliI CACNNNNGTG 2 cut(s) 544, 1382
PaeR7I CTCGAG 1 cut(s) 246
PciI ACATGT 2 cut(s) 901, 1113
PctI GAATGC 1 cut(s) 1416
PdmI GAANNNNTTC 2 cut(s) 843, 1149
PfeI GAWTC 4 cut(s) 57, 178, 473, 1502
PinAI ACCGGT 1 cut(s) 541
PleI GAGTC 1 cut(s) 544
PmaCI CACGTG 1 cut(s) 238
PmlI CACGTG 1 cut(s) 238
PpsI GAGTC 1 cut(s) 544
Ppu21I YACGTR 1 cut(s) 238
PscI ACATGT 2 cut(s) 901, 1113
PshBI ATTAAT 2 cut(s) 927, 1703
PsiI TTATAA 2 cut(s) 974, 1497
Psp6I CCWGG 2 cut(s) 1176, 1387
PspCI CACGTG 1 cut(s) 238
PspFI CCCAGC 1 cut(s) 1749
PspGI CCWGG 2 cut(s) 1176, 1387
PspN4I GGNNCC 5 cut(s) 6, 719, 1197, 1242, 1763
PspPI GGNCC 1 cut(s) 817
PspXI VCTCGAGB 1 cut(s) 246
PstI CTGCAG 1 cut(s) 511
PsuI RGATCY 2 cut(s) 4, 1761
RruI TCGCGA 1 cut(s) 1296
RsaI GTAC 4 cut(s) 398, 941, 1625, 1657
RsaNI GTAC 4 cut(s) 397, 940, 1624, 1656
RseI CAYNNNNRTG 4 cut(s) 544, 1112, 1382, 1721
SaqAI TTAA 7 cut(s) 425, 663, 927, 1086, 1398, 1703, 1789
Sau3AI GATC 6 cut(s) 4, 88, 283, 436, 868, 1761
Sau96I GGNCC 1 cut(s) 817
SchI GAGTC 1 cut(s) 545
ScrFI CCNGG 2 cut(s) 1178, 1389
SduI GDGCHC 3 cut(s) 506, 922, 1601
SfaNI GCATC 3 cut(s) 664, 770, 815
SfcI CTRYAG 1 cut(s) 507
Sfr274I CTCGAG 1 cut(s) 246
SgrAI CRCCGGYG 1 cut(s) 541
SlaI CTCGAG 1 cut(s) 246
SmiMI CAYNNNNRTG 4 cut(s) 544, 1112, 1382, 1721
SmlI CTYRAG 2 cut(s) 49, 246
SmoI CTYRAG 2 cut(s) 49, 246
SspI AATATT 1 cut(s) 1132
SspMI CTAG 2 cut(s) 495, 732
StyD4I CCNGG 2 cut(s) 1176, 1387
StyI CCWWGG 1 cut(s) 619
TaaI ACNGT 4 cut(s) 68, 401, 447, 693
TaiI ACGT 4 cut(s) 75, 240, 672, 1604
TaqI TCGA 5 cut(s) 247, 282, 559, 672, 1230
TatI WGTACW 1 cut(s) 939
TauI GCSGC 7 cut(s) 26, 140, 209, 245, 343, 593, 856
TfiI GAWTC 4 cut(s) 57, 178, 473, 1502
Tru1I TTAA 7 cut(s) 425, 663, 927, 1086, 1398, 1703, 1789
Tru9I TTAA 7 cut(s) 425, 663, 927, 1086, 1398, 1703, 1789
TscAI CASTG 4 cut(s) 303, 1162, 1470, 1772
TseFI GTSAC 3 cut(s) 68, 537, 574
TseI GCWGC 8 cut(s) 343, 491, 603, 704, 965, 1016, 1367, 1612
Tsp45I GTSAC 3 cut(s) 68, 537, 574
TspDTI ATGAA 3 cut(s) 171, 486, 848
TspGWI ACGGA 2 cut(s) 1177, 1422
TspRI CASTG 4 cut(s) 303, 1162, 1470, 1772
VspI ATTAAT 2 cut(s) 927, 1703
XagI CCTNNNNNAGG 1 cut(s) 17
XapI RAATTY 5 cut(s) 143, 158, 358, 1633, 1643
XceI RCATGY 3 cut(s) 386, 905, 1117
XcmI CCANNNNNNNNNTGG 1 cut(s) 198
XhoI CTCGAG 1 cut(s) 246
XmnI GAANNNNTTC 2 cut(s) 843, 1149
XspI CTAG 2 cut(s) 495, 732
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.