Rh5CG208500

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000319
Physical Location & Seq
Forward (+)
21015418 .. 21018088
2671 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG208500.1

Sequence Viewer

Length: 1794 bp
ATGGATCCTTACCTGTATGAGGCAGCGACGCTGGGAGATGTCAGCTTCATGAGAAGAATCAGAGACGGTGACGTATTACTAAACCACGATCTTCTCCTTCAGAAAACGCCTAAAGACAACAACATCCTTCACATCGCCGCCGAATTCAAACAGATTGAGTTTTTCAGACAAGTCCCGAGTCATTATTCTCCTGCTCTGTTTTGGGCTGCCAACAAAAAGGGCGACACTCCTCTGCACGTGGCCGCTAGAGTTGGCTGTGATGAAATAGTCGACTTCCTTATCGATCAGGCGAAAGCGCTGCACATAAGAGGAGCTGATGAGGAAAGCTGTCATCGAAAGTCGCTACTTCGGATGACGAATATAGAAATGGATACGGCTCTGCATGTGGCTGTGCGGTACGGTCATCTTGGAGTGGTGGTTATGTTAATGGAAGCCGATCCAGAACTGTGTTGTTTGACTAACAGGGCAGATGAATCTGTTTTGTTCTTGGCTGCTAGGAAGGGGTCTGCAGAGATTGCTCTTTATCTGTTGAACGAGTCTCCGGTGTGTCCTTGTTTTCGAGGGACTAATGGTGTGACGGCTTTGCACGCCGCTGTAACTCGCAGCAACCTCACCAGCAAAGGCATTGTGAGGACTATGGTGTCCAAATATCCTGAGATGATTAAAAACGTCGATGCACTTGGCTGGACACCGTTACACTATGCAGCATTTAGAGGGAACCTTGAAGCGACTAGAGTCCTGATGCAATGTGATAGTTCTGCATCTTACATCTTAGACAACTCTGGAATGTCAGCTCTCCATGTAGCAGCCCATGCCGGCCACACCAAGATAATGGAAGAACTGATTCGGTGGCGGCCTGATATTTGTGATCTGCTGAGTGACAAAGGCCAAACGGCTTTACATGCGGCAGTATTAGGAGCACGAGTTAATGTTGTGGAATACATATTGAAGACGCCTACGCTTGCAGCGATTATAAACGAAGCAGATAAAGATGGAAACACTCCTTTGCACTTGGCTGCCCTTCAGCAAAATGATAAAATCATCAAAGTTCTGTCAGGCGATCGTAGAGTGGACATGATTGCTATTAATAAGGATTTCTCGAAGCCCATTGACATGTTTCTTGGTGACAATATTGGTGAACAGGAAACAATTCGCAGTGGTACGGTTTTGCAACACCTGGGGTGCTCCGTTGGTGTGCCATTTTTCCAACAACAAATCAGTCGTGACTTTGACAAATTGGAACCACCGGACAAGGATATAGACAAGACCAGAGAAAACCAACAGCAAGCTCCTTCCGATGATCGTAATGCCTTGAAAAGAAATGACACCAAACTACTTGTAGCAACGCTGATTGCAACCGTCACATTTGCAGCTTCGTTCACCAATGTGCCTGGAGGATTTAAGGACGACGGAATGCCTGTTTTATATGACAAGGCGACTTTCAAAGTGTTTCAGTTCTTCAATGCAGTGTCCTTCTACATCTCAATTCTTGCAATCTATAACGAATCAACTCCGATAACTGTGTTATCCATCCATCTACCCACACCATCAAGTCTCATTCAGTATTCAATTGGAGGAATGGTGGTTGCATTTTTTTCAGGCACGTTAGCTGTGCAGCCGAGACACTACGATGGAAATTTGCTAGAATTTTTATTTGGTACAAGTTGGGTTGATATTGTGCTCGCGGTAATTTGTGGCATTTTATTAATATTAGCCATCATCCCTGTGCTGAAGTCTCTGATTCAAATAAGCAGAGGAAAGAGGATCCACTGGCTCCGAAACCGTGTAATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

597

Amino Acids

66.17

Weight (kDa)

6.44

Isoelectric Point (pI)

37.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 28 - 96 5.9e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 71 - 146 4.1e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 127 - 214 7.9e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 209 - 284 1.5e-11 Ankyrin repeats (3 copies)
Ank_4 PF13637 266 - 315 5.8e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 291 - 352 1.2e-09 Ankyrin repeats (3 copies)
PGG PF13962 439 - 537 4.8e-18 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000319)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18590 FvH4_1g18590 FvH4_3g16140 FvH4_3g16141 FvH4_3g16160
malus_domestica MD02G1193600.v1.1 MD04G1020900.v1.1 MD04G1021000.v1.1 MD05G1212100.v1.1 MD05G1212300.v1.1 MD05G1213100.v1.1 MD05G1213400.v1.1 MD10G1197300.v1.1
prunus_persica Prupe.4G144500_v2.0.a1 Prupe.4G144600_v2.0.a1 Prupe.4G144800_v2.0.a1 Prupe.4G144900_v2.0.a1 Prupe.4G145100_v2.0.a1 Prupe.4G145300_v2.0.a1
pyrus_communis pycom02g15730 pycom02g15740 pycom05g19670 pycom05g19680 pycom10g17020 pycom11g27250
rosa_chinensis RchiOBHm_Chr2g0109301 RchiOBHm_Chr2g0109321 RchiOBHm_Chr2g0109341 RchiOBHm_Chr2g0109381 RchiOBHm_Chr3g0482301 RchiOBHm_Chr5g0027111 RchiOBHm_Chr5g0027121 RchiOBHm_Chr5g0027141 RchiOBHm_Chr5g0027181 RchiOBHm_Chr5g0027241
rosa_laevigata RLG00000017731 RLG00000017732 RLG00000032990 RLG00000032992 RLG00000032993 RLG00000032995 RLG00000032997 RLG00000033002
rosa_multiflora Rmu_sc0000135.1_g000002 Rmu_sc0000332.1_g000010 Rmu_sc0000882.1_g000028 Rmu_sc0000882.1_g000032 Rmu_sc0000882.1_g000033 Rmu_sc0000882.1_g000039 Rmu_sc0000882.1_g000043 Rmu_sc0000882.1_g000046 Rmu_sc0006065.1_g000003 Rmu_sc0006065.1_g000012 Rmu_sc0006065.1_g000018 Rmu_sc0006065.1_g000019 Rmu_sc0006065.1_g000022 Rmu_sc0007497.1_g000002 Rmu_sc0013610.1_g000011 Rmu_sc0015338.1_g000006 Rmu_ssc0000357.1_g000035
rosa_roxburghii Rroxscaffold_1G00052250 Rroxscaffold_1G00052280 Rroxscaffold_1G00052290 Rroxscaffold_1G00052310 Rroxscaffold_1G00052330 Rroxscaffold_1G00052360 Rroxscaffold_1G00052380 Rroxscaffold_1G00052390 Rroxscaffold_2G00134310 Rroxscaffold_2G00134330
rosa_rugosa Rorug02G0159400 Rorug05G0097300 Rorug05G0097500 Rorug05G0097600 Rorug05G0097700 Rorug05G0097700 Rorug05G0097700 Rorug05G0122900
rosa_samantha Rh2AG210900 Rh2AG211200 Rh2AG211500 Rh2BG221200 Rh2BG221800 Rh2CG213100 Rh2CG213200 Rh2CG213600 Rh3CG277900 Rh3CG278000 Rh3CG278600 Rh3DG274600 Rh5BG188600 Rh5BG188700 Rh5BG188900 Rh5BG189100 Rh5BG189200 Rh5BG189400 Rh5CG208400 Rh5CG208500 Rh5CG208700 Rh5CG209000 Rh5CG209100 Rh5CG209400 Rh5CG209700 Rh5CG209800 Rh5CG209900 Rh5CG210000 Rh5DG190500 Rh5DG190700 Rh5DG191200 Rh5DG191500
rosa_wichuraiana Rw3G022160 Rw5G017410 Rw5G017420 Rw5G017450 Rw5G017460 Rw5G017470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 974
AasI GACNNNNNNGTC 1 cut(s) 640
AccI GTMKAC 1 cut(s) 270
AccII CGCG 1 cut(s) 1685
AciI CCGC 7 cut(s) 138, 243, 394, 591, 853, 905, 1685
AclWI GGATC 4 cut(s) 12, 431, 1759, 1772
AcoI YGGCCR 2 cut(s) 240, 817
AcsI RAATTY 3 cut(s) 143, 1636, 1646
AcuI CTGAAG 3 cut(s) 83, 1007, 1751
AcvI CACGTG 1 cut(s) 238
AcyI GRCGYC 1 cut(s) 953
AfaI GTAC 3 cut(s) 398, 1162, 1660
AfeI AGCGCT 1 cut(s) 297
AfiI CCNNNNNNNGG 1 cut(s) 19
AflIII ACRYGT 1 cut(s) 1113
AgsI TTSAA 9 cut(s) 148, 532, 725, 949, 1315, 1444, 1462, 1569, 1745
AjnI CCWGG 2 cut(s) 1176, 1390
AjuI GAANNNNNNNTTGG 2 cut(s) 1638, 1670
AleI CACNNNNGTG 1 cut(s) 1385
AluBI AGCT 7 cut(s) 45, 314, 327, 794, 1289, 1373, 1610
AluI AGCT 7 cut(s) 45, 314, 327, 794, 1289, 1373, 1610
Alw21I GWGCWC 3 cut(s) 922, 1187, 1683
Alw26I GTCTC 5 cut(s) 57, 543, 1559, 1615, 1740
AlwI GGATC 4 cut(s) 12, 431, 1759, 1772
Ama87I CYCGRG 1 cut(s) 175
Aor51HI AGCGCT 1 cut(s) 297
AoxI GGCC 4 cut(s) 240, 817, 854, 886
ApoI RAATTY 3 cut(s) 143, 1636, 1646
AseI ATTAAT 2 cut(s) 1086, 1706
Asp700I GAANNNNTTC 2 cut(s) 843, 1149
AspLEI GCGC 1 cut(s) 298
AsuHPI GGTGA 5 cut(s) 80, 604, 1136, 1148, 1372
AvaI CYCGRG 1 cut(s) 175
BamHI GGATCC 2 cut(s) 4, 1764
BauI CACGAG 1 cut(s) 921
BbrPI CACGTG 1 cut(s) 238
BbsI GAAGAC 1 cut(s) 956
Bbv12I GWGCWC 3 cut(s) 922, 1187, 1683
BccI CCATC 6 cut(s) 986, 1538, 1542, 1555, 1625, 1724
BceAI ACGGC 3 cut(s) 390, 594, 909
BcgI CGANNNNNNTGC 2 cut(s) 280, 314
BciT130I CCWGG 2 cut(s) 1178, 1392
BciVI GTATCC 1 cut(s) 364
BcoDI GTCTC 5 cut(s) 57, 543, 1559, 1615, 1740
BfaI CTAG 4 cut(s) 246, 495, 732, 1643
BfmI CTRYAG 1 cut(s) 507
BfoI RGCGCY 1 cut(s) 299
BfuI GTATCC 1 cut(s) 364
Bme1390I CCNGG 2 cut(s) 1178, 1392
BmeT110I CYCGRG 1 cut(s) 175
BmiI GGNNCC 5 cut(s) 6, 719, 1242, 1766, 1775
BmrFI CCNGG 2 cut(s) 1178, 1392
BmsI GCATC 3 cut(s) 664, 732, 770
BoxI GACNNNNGTC 1 cut(s) 734
BpiI GAAGAC 1 cut(s) 956
BpmI CTGGAG 1 cut(s) 1413
Bsa29I ATCGAT 1 cut(s) 282
BsaAI YACGTR 1 cut(s) 238
BsaHI GRCGYC 1 cut(s) 953
BsaJI CCNNGG 1 cut(s) 1177
BsaWI WCCGGW 2 cut(s) 541, 1246
BsaXI ACNNNNNCTCC 6 cut(s) 402, 432, 909, 939, 1566, 1596
Bsc4I CCNNNNNNNGG 1 cut(s) 19
Bse118I RCCGGY 1 cut(s) 815
Bse1I ACTGG 1 cut(s) 1775
Bse3DI GCAATG 1 cut(s) 752
BseBI CCWGG 2 cut(s) 1178, 1392
BseCI ATCGAT 1 cut(s) 282
BseDI CCNNGG 1 cut(s) 1177
BseGI GGATG 4 cut(s) 123, 357, 1530, 1719
BseLI CCNNNNNNNGG 1 cut(s) 19
BseMI GCAATG 1 cut(s) 752
BseMII CTCAG 2 cut(s) 645, 866
BseNI ACTGG 1 cut(s) 1775
BseRI GAGGAG 2 cut(s) 219, 324
BseYI CCCAGC 1 cut(s) 31
BsgI GTGCAG 3 cut(s) 218, 284, 1634
Bsh1236I CGCG 1 cut(s) 1685
Bsh1285I CGRYCG 1 cut(s) 1063
BshFI GGCC 4 cut(s) 242, 819, 856, 888
BshVI ATCGAT 1 cut(s) 282
BsiEI CGRYCG 1 cut(s) 1063
BsiHKAI GWGCWC 3 cut(s) 922, 1187, 1683
BsiHKCI CYCGRG 1 cut(s) 175
BsiSI CCGG 3 cut(s) 542, 816, 1247
BslFI GGGAC 2 cut(s) 158, 577
BslI CCNNNNNNNGG 1 cut(s) 19
BsmAI GTCTC 5 cut(s) 57, 543, 1559, 1615, 1740
BsmBI CGTCTC 1 cut(s) 57
BsmFI GGGAC 2 cut(s) 158, 577
BsmI GAATGC 1 cut(s) 1419
BsnI GGCC 4 cut(s) 242, 819, 856, 888
BsoBI CYCGRG 1 cut(s) 175
Bsp1286I GDGCHC 3 cut(s) 922, 1187, 1683
Bsp143I GATC 8 cut(s) 4, 88, 283, 436, 868, 1060, 1300, 1764
BspACI CCGC 7 cut(s) 138, 243, 394, 591, 853, 905, 1685
BspANI GGCC 4 cut(s) 242, 819, 856, 888
BspCNI CTCAG 2 cut(s) 646, 867
BspDI ATCGAT 1 cut(s) 282
BspFNI CGCG 1 cut(s) 1685
BspHI TCATGA 1 cut(s) 48
BspLI GGNNCC 5 cut(s) 6, 719, 1242, 1766, 1775
BspMAI CTGCAG 1 cut(s) 511
BspPI GGATC 4 cut(s) 12, 431, 1759, 1772
BsrDI GCAATG 1 cut(s) 752
BsrFI RCCGGY 1 cut(s) 815
BsrI ACTGG 1 cut(s) 1775
BssAI RCCGGY 1 cut(s) 815
BssECI CCNNGG 1 cut(s) 1177
BssMI GATC 8 cut(s) 4, 88, 283, 436, 868, 1060, 1300, 1764
BssNI GRCGYC 1 cut(s) 953
BssSI CACGAG 1 cut(s) 921
Bst2BI CACGAG 1 cut(s) 921
Bst2UI CCWGG 2 cut(s) 1178, 1392
Bst4CI ACNGT 8 cut(s) 68, 401, 447, 693, 1165, 1360, 1522, 1784
BstACI GRCGYC 1 cut(s) 953
BstAPI GCANNNNNTGC 2 cut(s) 515, 812
BstBAI YACGTR 1 cut(s) 238
BstC8I GCNNGC 5 cut(s) 588, 817, 963, 1287, 1683
BstDEI CTNAG 3 cut(s) 654, 772, 875
BstENI CCTNNNNNAGG 1 cut(s) 17
BstF5I GGATG 4 cut(s) 123, 357, 1530, 1719
BstFNI CGCG 1 cut(s) 1685
BstH2I RGCGCY 1 cut(s) 299
BstHHI GCGC 1 cut(s) 298
BstKTI GATC 8 cut(s) 7, 91, 286, 439, 871, 1063, 1303, 1767
BstMAI GTCTC 5 cut(s) 57, 543, 1559, 1615, 1740
BstMBI GATC 8 cut(s) 4, 88, 283, 436, 868, 1060, 1300, 1764
BstMCI CGRYCG 1 cut(s) 1063
BstMWI GCNNNNNNNGC 4 cut(s) 515, 587, 812, 902
BstNI CCWGG 2 cut(s) 1178, 1392
BstNSI RCATGY 3 cut(s) 386, 905, 1117
BstPAI GACNNNNGTC 1 cut(s) 734
BstSCI CCNGG 2 cut(s) 1176, 1390
BstSFI CTRYAG 1 cut(s) 507
BstUI CGCG 1 cut(s) 1685
BstV2I GAAGAC 1 cut(s) 956
BstX2I RGATCY 2 cut(s) 4, 1764
BstXI CCANNNNNNTGG 1 cut(s) 832
BstYI RGATCY 2 cut(s) 4, 1764
Bsu15I ATCGAT 1 cut(s) 282
BsuI GTATCC 1 cut(s) 364
BsuRI GGCC 4 cut(s) 242, 819, 856, 888
BsuTUI ATCGAT 1 cut(s) 282
BtgZI GCGATG 1 cut(s) 118
BtsCI GGATG 4 cut(s) 123, 357, 1530, 1719
BtsI GCAGTG 2 cut(s) 1162, 1473
BtsIMutI CAGTG 3 cut(s) 1162, 1473, 1768
Cac8I GCNNGC 5 cut(s) 588, 817, 963, 1287, 1683
CciI TCATGA 1 cut(s) 48
CfoI GCGC 1 cut(s) 298
Cfr10I RCCGGY 1 cut(s) 815
ClaI ATCGAT 1 cut(s) 282
CseI GACGC 2 cut(s) 37, 961
Csp6I GTAC 3 cut(s) 397, 1161, 1659
CviAII CATG 7 cut(s) 49, 383, 800, 812, 902, 1075, 1114
CviQI GTAC 3 cut(s) 397, 1161, 1659
DdeI CTNAG 3 cut(s) 654, 772, 875
DpnI GATC 8 cut(s) 6, 90, 285, 438, 870, 1062, 1302, 1766
DpnII GATC 8 cut(s) 4, 88, 283, 436, 868, 1060, 1300, 1764
DrdI GACNNNNNNGTC 1 cut(s) 640
DseDI GACNNNNNNGTC 1 cut(s) 640
EaeI YGGCCR 2 cut(s) 240, 817
Eco47III AGCGCT 1 cut(s) 297
Eco57I CTGAAG 3 cut(s) 83, 1007, 1751
Eco72I CACGTG 1 cut(s) 238
Eco88I CYCGRG 1 cut(s) 175
EcoNI CCTNNNNNAGG 1 cut(s) 17
EcoRI GAATTC 1 cut(s) 143
EcoRII CCWGG 2 cut(s) 1176, 1390
Esp3I CGTCTC 1 cut(s) 57
FaeI CATG 7 cut(s) 52, 386, 803, 815, 905, 1078, 1117
FaqI GGGAC 2 cut(s) 158, 577
FatI CATG 7 cut(s) 48, 382, 799, 811, 901, 1074, 1113
FblI GTMKAC 1 cut(s) 270
FokI GGATG 4 cut(s) 110, 364, 1517, 1706
FspBI CTAG 4 cut(s) 246, 495, 732, 1643
GlaI GCGC 1 cut(s) 297
GsaI CCCAGC 1 cut(s) 35
GsuI CTGGAG 1 cut(s) 1413
HaeII RGCGCY 1 cut(s) 299
HaeIII GGCC 4 cut(s) 242, 819, 856, 888
HapII CCGG 3 cut(s) 542, 816, 1247
HgaI GACGC 2 cut(s) 37, 961
HhaI GCGC 1 cut(s) 298
Hin1I GRCGYC 1 cut(s) 953
Hin1II CATG 7 cut(s) 52, 386, 803, 815, 905, 1078, 1117
Hin6I GCGC 1 cut(s) 296
HinP1I GCGC 1 cut(s) 296
HincII GTYRAC 1 cut(s) 271
HindII GTYRAC 1 cut(s) 271
HinfI GANTC 8 cut(s) 57, 178, 473, 536, 735, 844, 1505, 1741
HpaII CCGG 3 cut(s) 542, 816, 1247
HphI GGTGA 5 cut(s) 80, 604, 1136, 1148, 1372
Hpy166II GTNNAC 4 cut(s) 271, 1072, 1139, 1380
Hpy188I TCNGA 8 cut(s) 62, 102, 167, 351, 1297, 1515, 1740, 1778
Hpy188III TCNNGA 8 cut(s) 49, 175, 440, 653, 739, 783, 1099, 1223
Hpy8I GTNNAC 4 cut(s) 271, 1072, 1139, 1380
Hpy99I CGWCG 3 cut(s) 31, 674, 1412
HpyAV CCTTC 6 cut(s) 107, 137, 493, 1031, 1302, 1483
HpyCH4III ACNGT 8 cut(s) 68, 401, 447, 693, 1165, 1360, 1522, 1784
HpyCH4IV ACGT 4 cut(s) 72, 237, 669, 1604
HpyF10VI GCNNNNNNNGC 4 cut(s) 515, 587, 812, 902
HpyF3I CTNAG 3 cut(s) 654, 772, 875
HpySE526I ACGT 4 cut(s) 72, 237, 669, 1604
Hsp92I GRCGYC 1 cut(s) 953
Hsp92II CATG 7 cut(s) 52, 386, 803, 815, 905, 1078, 1117
HspAI GCGC 1 cut(s) 296
KroI GCCGGC 1 cut(s) 815
KroNI GCCGGC 1 cut(s) 817
Kzo9I GATC 8 cut(s) 4, 88, 283, 436, 868, 1060, 1300, 1764
LmnI GCTCC 5 cut(s) 311, 917, 1190, 1294, 1779
LweI GCATC 3 cut(s) 664, 732, 770
MaeI CTAG 4 cut(s) 246, 495, 732, 1643
MaeII ACGT 4 cut(s) 72, 237, 669, 1604
MaeIII GTNAC 8 cut(s) 68, 574, 595, 693, 878, 1124, 1223, 1360
MalI GATC 8 cut(s) 6, 90, 285, 438, 870, 1062, 1302, 1766
MboI GATC 8 cut(s) 4, 88, 283, 436, 868, 1060, 1300, 1764
MboII GAAGA 5 cut(s) 66, 83, 848, 961, 1450
MfeI CAATTG 1 cut(s) 1569
MflI RGATCY 2 cut(s) 4, 1764
MhlI GDGCHC 3 cut(s) 922, 1187, 1683
MluCI AATT 9 cut(s) 143, 1149, 1235, 1485, 1569, 1636, 1646, 1689, 1788
MlyI GAGTC 3 cut(s) 187, 545, 744
MmeI TCCRAC 1 cut(s) 1231
MroNI GCCGGC 1 cut(s) 815
MroXI GAANNNNTTC 2 cut(s) 843, 1149
MseI TTAA 7 cut(s) 425, 663, 927, 1086, 1401, 1706, 1792
MslI CAYNNNNRTG 4 cut(s) 1112, 1385, 1629, 1724
MspA1I CMGCKG 1 cut(s) 593
MspI CCGG 3 cut(s) 542, 816, 1247
MspR9I CCNGG 2 cut(s) 1178, 1392
MunI CAATTG 1 cut(s) 1569
Mva1269I GAATGC 1 cut(s) 1419
MvaI CCWGG 2 cut(s) 1178, 1392
MvnI CGCG 1 cut(s) 1685
MwoI GCNNNNNNNGC 4 cut(s) 515, 587, 812, 902
NaeI GCCGGC 1 cut(s) 817
NdeII GATC 8 cut(s) 4, 88, 283, 436, 868, 1060, 1300, 1764
NgoMIV GCCGGC 1 cut(s) 815
NlaIII CATG 7 cut(s) 52, 386, 803, 815, 905, 1078, 1117
NlaIV GGNNCC 5 cut(s) 6, 719, 1242, 1766, 1775
NmeAIII GCCGAG 1 cut(s) 1644
NmuCI GTSAC 6 cut(s) 68, 574, 878, 1124, 1223, 1360
NspI RCATGY 3 cut(s) 386, 905, 1117
OliI CACNNNNGTG 1 cut(s) 1385
PagI TCATGA 1 cut(s) 48
PciI ACATGT 1 cut(s) 1113
PcsI WCGNNNNNNNCGW 1 cut(s) 965
PctI GAATGC 1 cut(s) 1419
PdiI GCCGGC 1 cut(s) 817
PdmI GAANNNNTTC 2 cut(s) 843, 1149
PfeI GAWTC 5 cut(s) 57, 473, 844, 1505, 1741
Ple19I CGATCG 1 cut(s) 1063
PleI GAGTC 3 cut(s) 186, 544, 743
PmaCI CACGTG 1 cut(s) 238
PmlI CACGTG 1 cut(s) 238
PpsI GAGTC 3 cut(s) 186, 544, 743
Ppu21I YACGTR 1 cut(s) 238
PscI ACATGT 1 cut(s) 1113
PshAI GACNNNNGTC 1 cut(s) 734
PshBI ATTAAT 2 cut(s) 1086, 1706
PsiI TTATAA 1 cut(s) 974
Psp6I CCWGG 2 cut(s) 1176, 1390
PspCI CACGTG 1 cut(s) 238
PspFI CCCAGC 1 cut(s) 31
PspGI CCWGG 2 cut(s) 1176, 1390
PspN4I GGNNCC 5 cut(s) 6, 719, 1242, 1766, 1775
PstI CTGCAG 1 cut(s) 511
PsuI RGATCY 2 cut(s) 4, 1764
PvuI CGATCG 1 cut(s) 1063
RsaI GTAC 3 cut(s) 398, 1162, 1660
RsaNI GTAC 3 cut(s) 397, 1161, 1659
RseI CAYNNNNRTG 4 cut(s) 1112, 1385, 1629, 1724
SalI GTCGAC 1 cut(s) 269
SaqAI TTAA 7 cut(s) 425, 663, 927, 1086, 1401, 1706, 1792
Sau3AI GATC 8 cut(s) 4, 88, 283, 436, 868, 1060, 1300, 1764
SchI GAGTC 3 cut(s) 187, 545, 744
ScrFI CCNGG 2 cut(s) 1178, 1392
SduI GDGCHC 3 cut(s) 922, 1187, 1683
SfaNI GCATC 3 cut(s) 664, 732, 770
SfcI CTRYAG 1 cut(s) 507
SmiMI CAYNNNNRTG 4 cut(s) 1112, 1385, 1629, 1724
Sse9I AATT 9 cut(s) 143, 1149, 1235, 1485, 1569, 1636, 1646, 1689, 1788
SsiI CCGC 7 cut(s) 138, 243, 394, 591, 853, 905, 1685
SspI AATATT 2 cut(s) 1132, 1710
SspMI CTAG 4 cut(s) 246, 495, 732, 1643
StyD4I CCNGG 2 cut(s) 1176, 1390
TaaI ACNGT 8 cut(s) 68, 401, 447, 693, 1165, 1360, 1522, 1784
TaiI ACGT 4 cut(s) 75, 240, 672, 1607
TaqI TCGA 6 cut(s) 270, 282, 334, 559, 672, 1100
TasI AATT 9 cut(s) 143, 1149, 1235, 1485, 1569, 1636, 1646, 1689, 1788
TauI GCSGC 5 cut(s) 140, 245, 593, 856, 908
TfiI GAWTC 5 cut(s) 57, 473, 844, 1505, 1741
Tru1I TTAA 7 cut(s) 425, 663, 927, 1086, 1401, 1706, 1792
Tru9I TTAA 7 cut(s) 425, 663, 927, 1086, 1401, 1706, 1792
TscAI CASTG 3 cut(s) 1162, 1473, 1775
TseFI GTSAC 6 cut(s) 68, 574, 878, 1124, 1223, 1360
Tsp45I GTSAC 6 cut(s) 68, 574, 878, 1124, 1223, 1360
TspDTI ATGAA 3 cut(s) 37, 276, 486
TspGWI ACGGA 2 cut(s) 1177, 1425
TspRI CASTG 3 cut(s) 1162, 1473, 1775
VspI ATTAAT 2 cut(s) 1086, 1706
XagI CCTNNNNNAGG 1 cut(s) 17
XapI RAATTY 3 cut(s) 143, 1636, 1646
XceI RCATGY 3 cut(s) 386, 905, 1117
XmiI GTMKAC 1 cut(s) 270
XmnI GAANNNNTTC 2 cut(s) 843, 1149
XspI CTAG 4 cut(s) 246, 495, 732, 1643
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.