Rw5G017460

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000319
Physical Location & Seq
Forward (+)
22263172 .. 22266391
3220 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G017460.1

Sequence Viewer

Length: 1764 bp
ATGGATCCTTACCTGTACGAGGCGGCGACGCTCGGAGATGTCAGCTTCTTGAGAAGAATCAGAGACGGTGACGTATTACTAAACCACGATCTTCTCCTTCAGAAAACGCCTAAAGACAACAACATTCTACACATCGCCGCCGAATTCAAACACAATGAATTTTTCGGACAAGTCCCGAATCACTATTCTCCAGCTCTGTTTTGGGCGGCCAACAAAAAGGGCGACACTCCTCTGCACGTGGCCGCTAGAGTAGGCTGTGATAAAATAGTCAAGTTCCTCATCGATCAGGCGAAAGCGCTGCACATAAGAGGAGCTGATGAGGAAAGCTGTCATCCAAAGCCGCTGCTTCGGATGACGAATTTAGAAATGGATACGGCTCTGCATGTGGCTGTGCGGTACGGTCATCGTGAAGTGGTGGTCAGGTTAATGGAAGCCGATCCTGAACTGTGTTGTTTGACAAACAGGGCAGATGAATCGGTTTTGTTCTTGGCTGCTAGGAAGGGGTCTGCAGAGATTGCTCGTTATCTGTTGGACGAGTCACCGGTGTGTCCTTGTTTTCGAGGGACGAATGGTGTGACGGCTTTGCACGCCGCTGTAACTCGCAGCAACCTCACCAGCCAAGGCATTGTGAAGACTATGGTGTCCAAAAATCCTGAGATGATTAAAAACGTCGATGCACTTGGCTGGACACCGTTACATTATGCAGCATTTAGAGGGACCTTGAATTCTGCATCTTACATCTTAGACAACTCTGGAATGTCAGCTCTCCATGTAGCATCCCATGCCGGCCACACCAAGATAATGAAAGAACTAATTCGGTGGCGACCTGATATTTGTGATCTGCTGAATGATAAAGGCCAAACGGCTTTACATGTGGCAGTATTAGGAGCACGAATTAATGTTGTGGAGTACATATTGAAGACGCCTAAGCTTGCAGCGATTATAAACGAAGCAGATAAAGATGGCAACACTCCTTTGCACTTGGCTGCCCTTCAGCAAAATGATAAAATCATCAAAATACTGTCAGGCAATCGTAGAGTGGACCTGATTGCTATTAACAAGGATTTCTTGAAGCCCATTGACATGTTTCTTGGTGAAAATATTGGTGAACAGGAAACAATTCGCAGTGGTATGATTTTGCACAACCTGGGTTGCTCCGTTGGTGTGCCATTTTTCCAACAACAAATCAGTCGTGACTTCAACAAATTGGAACCACTAGAGAAGGACACAGACAAGATCAGAGAAAACCAGCTGCAAGCTCCTCCGGATGATCGTAATGCCTTAGAAAGAGATGACACCAAACTACTTGTTGCAACGCTCATTGCAACTGTCACGTTTGCAGCATCTTTCACCAGCGTGCCTGGAGGATTTAAAGACAACGGAATGCCTATTTTATATGACAAGGCCGCTTTCAAAGTGTTTCAATTCTTCAATGCAGTGTCCTTCTACATCTCAATTCTTGCAATCTATAACGAATCAACTCCGATAACTGTGTTATCCATCCATCTACCCACTCCATCAATTCTGATTCAGTATTCAATTGGAGGAATGGTGGTTGCATTTTTTTCGGGCACGTTAGCGGTGCAGCCAAGACAGTACGATGGAAATTTGCTTGAATTTTTATTTGGTACAAGTTGGGTTGATATTCTGCTCGCGGCAATTTGTGGCATTTTATTAATGTTAGCCATCATCCCTGTGCTGAAGTCTCTTATTCAAATAAGCAGGGGAAAGAGGATCCACTGGCTCCGAAACCATGTAATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

587

Amino Acids

65.18

Weight (kDa)

7.31

Isoelectric Point (pI)

31.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 28 - 96 8.1e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 120 - 178 1.3e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 127 - 216 5.6e-11 Ankyrin repeats (3 copies)
Ank_2 PF12796 189 - 250 1.5e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 208 - 273 1.6e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 256 - 342 6.2e-14 Ankyrin repeats (3 copies)
Ank_4 PF13637 256 - 305 4.7e-06 Ankyrin repeats (many copies)
PGG PF13962 430 - 527 3.4e-18 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000319)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18590 FvH4_1g18590 FvH4_3g16140 FvH4_3g16141 FvH4_3g16160
malus_domestica MD02G1193600.v1.1 MD04G1020900.v1.1 MD04G1021000.v1.1 MD05G1212100.v1.1 MD05G1212300.v1.1 MD05G1213100.v1.1 MD05G1213400.v1.1 MD10G1197300.v1.1
prunus_persica Prupe.4G144500_v2.0.a1 Prupe.4G144600_v2.0.a1 Prupe.4G144800_v2.0.a1 Prupe.4G144900_v2.0.a1 Prupe.4G145100_v2.0.a1 Prupe.4G145300_v2.0.a1
pyrus_communis pycom02g15730 pycom02g15740 pycom05g19670 pycom05g19680 pycom10g17020 pycom11g27250
rosa_chinensis RchiOBHm_Chr2g0109301 RchiOBHm_Chr2g0109321 RchiOBHm_Chr2g0109341 RchiOBHm_Chr2g0109381 RchiOBHm_Chr3g0482301 RchiOBHm_Chr5g0027111 RchiOBHm_Chr5g0027121 RchiOBHm_Chr5g0027141 RchiOBHm_Chr5g0027181 RchiOBHm_Chr5g0027241
rosa_laevigata RLG00000017731 RLG00000017732 RLG00000032990 RLG00000032992 RLG00000032993 RLG00000032995 RLG00000032997 RLG00000033002
rosa_multiflora Rmu_sc0000135.1_g000002 Rmu_sc0000332.1_g000010 Rmu_sc0000882.1_g000028 Rmu_sc0000882.1_g000032 Rmu_sc0000882.1_g000033 Rmu_sc0000882.1_g000039 Rmu_sc0000882.1_g000043 Rmu_sc0000882.1_g000046 Rmu_sc0006065.1_g000003 Rmu_sc0006065.1_g000012 Rmu_sc0006065.1_g000018 Rmu_sc0006065.1_g000019 Rmu_sc0006065.1_g000022 Rmu_sc0007497.1_g000002 Rmu_sc0013610.1_g000011 Rmu_sc0015338.1_g000006 Rmu_ssc0000357.1_g000035
rosa_roxburghii Rroxscaffold_1G00052250 Rroxscaffold_1G00052280 Rroxscaffold_1G00052290 Rroxscaffold_1G00052310 Rroxscaffold_1G00052330 Rroxscaffold_1G00052360 Rroxscaffold_1G00052380 Rroxscaffold_1G00052390 Rroxscaffold_2G00134310 Rroxscaffold_2G00134330
rosa_rugosa Rorug02G0159400 Rorug05G0097300 Rorug05G0097500 Rorug05G0097600 Rorug05G0097700 Rorug05G0097700 Rorug05G0097700 Rorug05G0122900
rosa_samantha Rh2AG210900 Rh2AG211200 Rh2AG211500 Rh2BG221200 Rh2BG221800 Rh2CG213100 Rh2CG213200 Rh2CG213600 Rh3CG277900 Rh3CG278000 Rh3CG278600 Rh3DG274600 Rh5BG188600 Rh5BG188700 Rh5BG188900 Rh5BG189100 Rh5BG189200 Rh5BG189400 Rh5CG208400 Rh5CG208500 Rh5CG208700 Rh5CG209000 Rh5CG209100 Rh5CG209400 Rh5CG209700 Rh5CG209800 Rh5CG209900 Rh5CG210000 Rh5DG190500 Rh5DG190700 Rh5DG191200 Rh5DG191500
rosa_wichuraiana Rw3G022160 Rw5G017410 Rw5G017420 Rw5G017450 Rw5G017460 Rw5G017470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 944
AasI GACNNNNNNGTC 1 cut(s) 640
AccII CGCG 1 cut(s) 1655
AccIII TCCGGA 1 cut(s) 1264
AclWI GGATC 4 cut(s) 12, 431, 1729, 1742
AcoI YGGCCR 3 cut(s) 207, 240, 787
AcsI RAATTY 6 cut(s) 143, 158, 358, 724, 1606, 1616
AcuI CTGAAG 3 cut(s) 83, 977, 1721
AcvI CACGTG 1 cut(s) 238
AcyI GRCGYC 1 cut(s) 923
AfaI GTAC 5 cut(s) 17, 398, 911, 1598, 1630
AfeI AGCGCT 1 cut(s) 297
AfiI CCNNNNNNNGG 1 cut(s) 19
AflIII ACRYGT 2 cut(s) 871, 1083
AgeI ACCGGT 1 cut(s) 541
AjnI CCWGG 2 cut(s) 1146, 1360
AjuI GAANNNNNNNTTGG 2 cut(s) 1608, 1640
AleI CACNNNNGTG 2 cut(s) 544, 1355
AluBI AGCT 8 cut(s) 45, 194, 314, 327, 764, 931, 1252, 1259
AluI AGCT 8 cut(s) 45, 194, 314, 327, 764, 931, 1252, 1259
Alw21I GWGCWC 1 cut(s) 892
Alw26I GTCTC 2 cut(s) 57, 1710
AlwI GGATC 4 cut(s) 12, 431, 1729, 1742
Aor13HI TCCGGA 1 cut(s) 1264
Aor51HI AGCGCT 1 cut(s) 297
AoxI GGCC 5 cut(s) 207, 240, 787, 856, 1404
ApoI RAATTY 6 cut(s) 143, 158, 358, 724, 1606, 1616
ArsI GACNNNNNNTTYG 2 cut(s) 816, 848
AseI ATTAAT 2 cut(s) 897, 1676
AsiGI ACCGGT 1 cut(s) 541
Asp700I GAANNNNTTC 2 cut(s) 813, 1119
AspLEI GCGC 1 cut(s) 298
AspS9I GGNCC 2 cut(s) 717, 1042
AsuHPI GGTGA 6 cut(s) 80, 531, 604, 1106, 1118, 1342
AvaII GGWCC 2 cut(s) 717, 1042
BaeGI GKGCMC 1 cut(s) 1574
BamHI GGATCC 2 cut(s) 4, 1734
BbrPI CACGTG 1 cut(s) 238
BbsI GAAGAC 2 cut(s) 638, 926
Bbv12I GWGCWC 1 cut(s) 892
BccI CCATC 6 cut(s) 956, 1508, 1512, 1525, 1595, 1694
BceAI ACGGC 3 cut(s) 390, 594, 879
BcgI CGANNNNNNTGC 6 cut(s) 280, 314, 456, 490, 1548, 1582
BciT130I CCWGG 2 cut(s) 1148, 1362
BciVI GTATCC 1 cut(s) 364
BcoDI GTCTC 2 cut(s) 57, 1710
BfaI CTAG 3 cut(s) 246, 495, 1217
BfmI CTRYAG 1 cut(s) 507
BfoI RGCGCY 1 cut(s) 299
BfuI GTATCC 1 cut(s) 364
Bme1390I CCNGG 2 cut(s) 1148, 1362
Bme18I GGWCC 2 cut(s) 717, 1042
BmgT120I GGNCC 2 cut(s) 717, 1042
BmiI GGNNCC 5 cut(s) 6, 718, 1212, 1736, 1745
BmrFI CCNGG 2 cut(s) 1148, 1362
BmsI GCATC 4 cut(s) 664, 740, 785, 1352
BpiI GAAGAC 2 cut(s) 638, 926
BpmI CTGGAG 2 cut(s) 174, 1383
Bpu10I CCTNAGC 1 cut(s) 927
BpuEI CTTGAG 1 cut(s) 70
Bsa29I ATCGAT 1 cut(s) 282
BsaAI YACGTR 1 cut(s) 238
BsaHI GRCGYC 1 cut(s) 923
BsaJI CCNNGG 2 cut(s) 619, 1147
BsaWI WCCGGW 2 cut(s) 541, 1264
BsaXI ACNNNNNCTCC 2 cut(s) 1536, 1566
Bsc4I CCNNNNNNNGG 1 cut(s) 19
Bse118I RCCGGY 2 cut(s) 541, 785
Bse1I ACTGG 1 cut(s) 1745
Bse3DI GCAATG 1 cut(s) 1320
BseAI TCCGGA 1 cut(s) 1264
BseBI CCWGG 2 cut(s) 1148, 1362
BseCI ATCGAT 1 cut(s) 282
BseDI CCNNGG 2 cut(s) 619, 1147
BseGI GGATG 6 cut(s) 331, 357, 776, 1273, 1500, 1689
BseLI CCNNNNNNNGG 1 cut(s) 19
BseMI GCAATG 1 cut(s) 1320
BseMII CTCAG 1 cut(s) 645
BseNI ACTGG 1 cut(s) 1745
BseRI GAGGAG 3 cut(s) 219, 324, 1251
BseSI GKGCMC 1 cut(s) 1574
BsgI GTGCAG 3 cut(s) 218, 284, 1604
Bsh1236I CGCG 1 cut(s) 1655
BshFI GGCC 5 cut(s) 209, 242, 789, 858, 1406
BshTI ACCGGT 1 cut(s) 541
BshVI ATCGAT 1 cut(s) 282
BsiHKAI GWGCWC 1 cut(s) 892
BsiSI CCGG 3 cut(s) 542, 786, 1265
BslFI GGGAC 3 cut(s) 158, 577, 730
BslI CCNNNNNNNGG 1 cut(s) 19
BsmAI GTCTC 2 cut(s) 57, 1710
BsmBI CGTCTC 1 cut(s) 57
BsmFI GGGAC 3 cut(s) 158, 577, 730
BsmI GAATGC 1 cut(s) 1389
BsnI GGCC 5 cut(s) 209, 242, 789, 858, 1406
Bsp1286I GDGCHC 2 cut(s) 892, 1574
Bsp13I TCCGGA 1 cut(s) 1264
Bsp143I GATC 8 cut(s) 4, 88, 283, 436, 838, 1236, 1270, 1734
BspANI GGCC 5 cut(s) 209, 242, 789, 858, 1406
BspCNI CTCAG 1 cut(s) 646
BspDI ATCGAT 1 cut(s) 282
BspEI TCCGGA 1 cut(s) 1264
BspFNI CGCG 1 cut(s) 1655
BspLI GGNNCC 5 cut(s) 6, 718, 1212, 1736, 1745
BspMAI CTGCAG 1 cut(s) 511
BspPI GGATC 4 cut(s) 12, 431, 1729, 1742
BsrDI GCAATG 1 cut(s) 1320
BsrFI RCCGGY 2 cut(s) 541, 785
BsrI ACTGG 1 cut(s) 1745
BssAI RCCGGY 2 cut(s) 541, 785
BssECI CCNNGG 2 cut(s) 619, 1147
BssMI GATC 8 cut(s) 4, 88, 283, 436, 838, 1236, 1270, 1734
BssNI GRCGYC 1 cut(s) 923
BssT1I CCWWGG 1 cut(s) 619
Bst2UI CCWGG 2 cut(s) 1148, 1362
Bst4CI ACNGT 8 cut(s) 68, 401, 447, 693, 1023, 1330, 1492, 1596
BstACI GRCGYC 1 cut(s) 923
BstAPI GCANNNNNTGC 2 cut(s) 515, 782
BstBAI YACGTR 1 cut(s) 238
BstC8I GCNNGC 6 cut(s) 588, 787, 933, 1257, 1358, 1653
BstDEI CTNAG 4 cut(s) 654, 742, 927, 1282
BstENI CCTNNNNNAGG 1 cut(s) 17
BstF5I GGATG 6 cut(s) 331, 357, 776, 1273, 1500, 1689
BstFNI CGCG 1 cut(s) 1655
BstH2I RGCGCY 1 cut(s) 299
BstHHI GCGC 1 cut(s) 298
BstKTI GATC 8 cut(s) 7, 91, 286, 439, 841, 1239, 1273, 1737
BstMAI GTCTC 2 cut(s) 57, 1710
BstMBI GATC 8 cut(s) 4, 88, 283, 436, 838, 1236, 1270, 1734
BstMWI GCNNNNNNNGC 3 cut(s) 515, 587, 782
BstNI CCWGG 2 cut(s) 1148, 1362
BstNSI RCATGY 3 cut(s) 386, 875, 1087
BstSCI CCNGG 2 cut(s) 1146, 1360
BstSFI CTRYAG 1 cut(s) 507
BstSLI GKGCMC 1 cut(s) 1574
BstUI CGCG 1 cut(s) 1655
BstV2I GAAGAC 2 cut(s) 638, 926
BstX2I RGATCY 2 cut(s) 4, 1734
BstYI RGATCY 2 cut(s) 4, 1734
Bsu15I ATCGAT 1 cut(s) 282
BsuI GTATCC 1 cut(s) 364
BsuRI GGCC 5 cut(s) 209, 242, 789, 858, 1406
BsuTUI ATCGAT 1 cut(s) 282
BtgZI GCGATG 1 cut(s) 118
BtsCI GGATG 6 cut(s) 331, 357, 776, 1273, 1500, 1689
BtsI GCAGTG 2 cut(s) 1132, 1443
BtsIMutI CAGTG 3 cut(s) 1132, 1443, 1738
Cac8I GCNNGC 6 cut(s) 588, 787, 933, 1257, 1358, 1653
CfoI GCGC 1 cut(s) 298
Cfr10I RCCGGY 2 cut(s) 541, 785
Cfr13I GGNCC 2 cut(s) 717, 1042
ClaI ATCGAT 1 cut(s) 282
CseI GACGC 2 cut(s) 37, 931
Csp6I GTAC 5 cut(s) 16, 397, 910, 1597, 1629
CspAI ACCGGT 1 cut(s) 541
CviAII CATG 6 cut(s) 383, 770, 782, 872, 1084, 1754
CviQI GTAC 5 cut(s) 16, 397, 910, 1597, 1629
DdeI CTNAG 4 cut(s) 654, 742, 927, 1282
DpnI GATC 8 cut(s) 6, 90, 285, 438, 840, 1238, 1272, 1736
DpnII GATC 8 cut(s) 4, 88, 283, 436, 838, 1236, 1270, 1734
DraI TTTAAA 1 cut(s) 1372
DrdI GACNNNNNNGTC 1 cut(s) 640
DseDI GACNNNNNNGTC 1 cut(s) 640
EaeI YGGCCR 3 cut(s) 207, 240, 787
Eco130I CCWWGG 1 cut(s) 619
Eco47I GGWCC 2 cut(s) 717, 1042
Eco47III AGCGCT 1 cut(s) 297
Eco57I CTGAAG 3 cut(s) 83, 977, 1721
Eco72I CACGTG 1 cut(s) 238
EcoNI CCTNNNNNAGG 1 cut(s) 17
EcoO109I RGGNCCY 1 cut(s) 717
EcoRI GAATTC 2 cut(s) 143, 724
EcoRII CCWGG 2 cut(s) 1146, 1360
EcoT14I CCWWGG 1 cut(s) 619
ErhI CCWWGG 1 cut(s) 619
Esp3I CGTCTC 1 cut(s) 57
FaeI CATG 6 cut(s) 386, 773, 785, 875, 1087, 1757
FalI AAGNNNNNCTT 2 cut(s) 1052, 1084
FaqI GGGAC 3 cut(s) 158, 577, 730
FatI CATG 6 cut(s) 382, 769, 781, 871, 1083, 1753
FokI GGATG 6 cut(s) 318, 364, 763, 1280, 1487, 1676
FspBI CTAG 3 cut(s) 246, 495, 1217
GlaI GCGC 1 cut(s) 297
GsuI CTGGAG 2 cut(s) 174, 1383
HaeII RGCGCY 1 cut(s) 299
HaeIII GGCC 5 cut(s) 209, 242, 789, 858, 1406
HapII CCGG 3 cut(s) 542, 786, 1265
HgaI GACGC 2 cut(s) 37, 931
HhaI GCGC 1 cut(s) 298
Hin1I GRCGYC 1 cut(s) 923
Hin1II CATG 6 cut(s) 386, 773, 785, 875, 1087, 1757
Hin6I GCGC 1 cut(s) 296
HinP1I GCGC 1 cut(s) 296
HindIII AAGCTT 1 cut(s) 929
HinfI GANTC 6 cut(s) 57, 178, 473, 536, 1475, 1528
HpaII CCGG 3 cut(s) 542, 786, 1265
HphI GGTGA 6 cut(s) 80, 531, 604, 1106, 1118, 1342
Hpy166II GTNNAC 2 cut(s) 1042, 1109
Hpy188I TCNGA 9 cut(s) 35, 62, 102, 167, 351, 1241, 1485, 1527, 1748
Hpy188III TCNNGA 9 cut(s) 49, 175, 407, 440, 653, 753, 1069, 1193, 1265
Hpy8I GTNNAC 2 cut(s) 1042, 1109
Hpy99I CGWCG 2 cut(s) 31, 674
HpyAV CCTTC 5 cut(s) 107, 493, 1001, 1216, 1453
HpyCH4III ACNGT 8 cut(s) 68, 401, 447, 693, 1023, 1330, 1492, 1596
HpyCH4IV ACGT 5 cut(s) 72, 237, 669, 1334, 1574
HpyF10VI GCNNNNNNNGC 3 cut(s) 515, 587, 782
HpyF3I CTNAG 4 cut(s) 654, 742, 927, 1282
HpySE526I ACGT 5 cut(s) 72, 237, 669, 1334, 1574
Hsp92I GRCGYC 1 cut(s) 923
Hsp92II CATG 6 cut(s) 386, 773, 785, 875, 1087, 1757
HspAI GCGC 1 cut(s) 296
Kpn2I TCCGGA 1 cut(s) 1264
KroI GCCGGC 1 cut(s) 785
KroNI GCCGGC 1 cut(s) 787
Kzo9I GATC 8 cut(s) 4, 88, 283, 436, 838, 1236, 1270, 1734
LmnI GCTCC 5 cut(s) 311, 887, 1160, 1264, 1749
LweI GCATC 4 cut(s) 664, 740, 785, 1352
MaeI CTAG 3 cut(s) 246, 495, 1217
MaeII ACGT 5 cut(s) 72, 237, 669, 1334, 1574
MaeIII GTNAC 7 cut(s) 68, 537, 574, 595, 693, 1193, 1330
MalI GATC 8 cut(s) 6, 90, 285, 438, 840, 1238, 1272, 1736
MboI GATC 8 cut(s) 4, 88, 283, 436, 838, 1236, 1270, 1734
MboII GAAGA 5 cut(s) 66, 83, 643, 931, 1420
MfeI CAATTG 1 cut(s) 1539
MflI RGATCY 2 cut(s) 4, 1734
MhlI GDGCHC 2 cut(s) 892, 1574
MlyI GAGTC 1 cut(s) 545
MmeI TCCRAC 2 cut(s) 510, 1201
MroI TCCGGA 1 cut(s) 1264
MroNI GCCGGC 1 cut(s) 785
MroXI GAANNNNTTC 2 cut(s) 813, 1119
MseI TTAA 7 cut(s) 425, 663, 897, 1056, 1371, 1676, 1762
MslI CAYNNNNRTG 4 cut(s) 544, 1082, 1355, 1694
MspA1I CMGCKG 3 cut(s) 343, 593, 1252
MspI CCGG 3 cut(s) 542, 786, 1265
MspR9I CCNGG 2 cut(s) 1148, 1362
MunI CAATTG 1 cut(s) 1539
Mva1269I GAATGC 1 cut(s) 1389
MvaI CCWGG 2 cut(s) 1148, 1362
MvnI CGCG 1 cut(s) 1655
MwoI GCNNNNNNNGC 3 cut(s) 515, 587, 782
NaeI GCCGGC 1 cut(s) 787
NdeII GATC 8 cut(s) 4, 88, 283, 436, 838, 1236, 1270, 1734
NgoMIV GCCGGC 1 cut(s) 785
NlaIII CATG 6 cut(s) 386, 773, 785, 875, 1087, 1757
NlaIV GGNNCC 5 cut(s) 6, 718, 1212, 1736, 1745
NmuCI GTSAC 5 cut(s) 68, 537, 574, 1193, 1330
NspI RCATGY 3 cut(s) 386, 875, 1087
OliI CACNNNNGTG 2 cut(s) 544, 1355
PciI ACATGT 2 cut(s) 871, 1083
PctI GAATGC 1 cut(s) 1389
PdiI GCCGGC 1 cut(s) 787
PdmI GAANNNNTTC 2 cut(s) 813, 1119
PfeI GAWTC 5 cut(s) 57, 178, 473, 1475, 1528
PinAI ACCGGT 1 cut(s) 541
PleI GAGTC 1 cut(s) 544
PmaCI CACGTG 1 cut(s) 238
PmlI CACGTG 1 cut(s) 238
PpsI GAGTC 1 cut(s) 544
Ppu21I YACGTR 1 cut(s) 238
PpuMI RGGWCCY 1 cut(s) 717
PscI ACATGT 2 cut(s) 871, 1083
PshBI ATTAAT 2 cut(s) 897, 1676
PsiI TTATAA 1 cut(s) 944
Psp5II RGGWCCY 1 cut(s) 717
Psp6I CCWGG 2 cut(s) 1146, 1360
PspCI CACGTG 1 cut(s) 238
PspGI CCWGG 2 cut(s) 1146, 1360
PspN4I GGNNCC 5 cut(s) 6, 718, 1212, 1736, 1745
PspPI GGNCC 2 cut(s) 717, 1042
PspPPI RGGWCCY 1 cut(s) 717
PstI CTGCAG 1 cut(s) 511
PsuI RGATCY 2 cut(s) 4, 1734
PvuII CAGCTG 1 cut(s) 1252
RsaI GTAC 5 cut(s) 17, 398, 911, 1598, 1630
RsaNI GTAC 5 cut(s) 16, 397, 910, 1597, 1629
RseI CAYNNNNRTG 4 cut(s) 544, 1082, 1355, 1694
SaqAI TTAA 7 cut(s) 425, 663, 897, 1056, 1371, 1676, 1762
Sau3AI GATC 8 cut(s) 4, 88, 283, 436, 838, 1236, 1270, 1734
Sau96I GGNCC 2 cut(s) 717, 1042
SchI GAGTC 1 cut(s) 545
ScrFI CCNGG 2 cut(s) 1148, 1362
SduI GDGCHC 2 cut(s) 892, 1574
SfaNI GCATC 4 cut(s) 664, 740, 785, 1352
SfcI CTRYAG 1 cut(s) 507
SgrAI CRCCGGYG 1 cut(s) 541
SinI GGWCC 2 cut(s) 717, 1042
SmiMI CAYNNNNRTG 4 cut(s) 544, 1082, 1355, 1694
SmlI CTYRAG 1 cut(s) 49
SmoI CTYRAG 1 cut(s) 49
SspI AATATT 1 cut(s) 1102
SspMI CTAG 3 cut(s) 246, 495, 1217
StyD4I CCNGG 2 cut(s) 1146, 1360
StyI CCWWGG 1 cut(s) 619
TaaI ACNGT 8 cut(s) 68, 401, 447, 693, 1023, 1330, 1492, 1596
TaiI ACGT 5 cut(s) 75, 240, 672, 1337, 1577
TaqI TCGA 3 cut(s) 282, 559, 672
TatI WGTACW 1 cut(s) 909
TauI GCSGC 8 cut(s) 26, 140, 209, 245, 343, 593, 1409, 1658
TfiI GAWTC 5 cut(s) 57, 178, 473, 1475, 1528
Tru1I TTAA 7 cut(s) 425, 663, 897, 1056, 1371, 1676, 1762
Tru9I TTAA 7 cut(s) 425, 663, 897, 1056, 1371, 1676, 1762
TscAI CASTG 3 cut(s) 1132, 1443, 1745
TseFI GTSAC 5 cut(s) 68, 537, 574, 1193, 1330
Tsp45I GTSAC 5 cut(s) 68, 537, 574, 1193, 1330
TspDTI ATGAA 3 cut(s) 171, 486, 818
TspGWI ACGGA 2 cut(s) 1147, 1395
TspRI CASTG 3 cut(s) 1132, 1443, 1745
VpaK11BI GGWCC 2 cut(s) 717, 1042
VspI ATTAAT 2 cut(s) 897, 1676
XagI CCTNNNNNAGG 1 cut(s) 17
XapI RAATTY 6 cut(s) 143, 158, 358, 724, 1606, 1616
XceI RCATGY 3 cut(s) 386, 875, 1087
XcmI CCANNNNNNNNNTGG 1 cut(s) 198
XmnI GAANNNNTTC 2 cut(s) 813, 1119
XspI CTAG 3 cut(s) 246, 495, 1217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.