RchiOBHm_Chr5g0027121

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000319
Physical Location & Seq
Forward (+)
21084705 .. 21090583
5879 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30667

Sequence Viewer

Length: 1896 bp
ATGATTTTCGCATGTTTGATGGGCACACTAGGACTAGTGCAGTCTGCAAAATTGACAACGTTCAACTGGTCAGACGCTTGGACGTTTCTAATATTCATCTTTTTCACGTCAATTGTTATTCAGTGGCAGATCTACTTCAGGGGCTGGTTGGGCTTCAAATTTTGTAGACTATGTGTTAAATCTTCAAATTGTCTGGTCTTGCTCCGTTGGCTATGGATTTTGATTTTAATCGAAGTAATCCAAAGCTGGATGGATCATTCTATGTGCTATTTCTTTCGATTGAAAGAGAGAGAGTGCCGGATGGATCCTTCTATGTATAGGGCGGCAACTTGTGGTGATGTTGGTTTCTTGCAAAGAATTAGAGATGGTGATGTATCGACTGATCTTCTCAGTCAAAAAACCCCAAAGGGCAACAACATTCTTCACCTTGCAGCTGAATTCAAGCAGATCAATTTCTTCAAAGGCGTCCCTTCCTTTGAGAAAGGCTCTCCGCTGCTTTGGAACATCAACAAGATGGGTGATACCCCCTTGCACATTGCTGCAAGAGTAGGATGCGTTGAATTGGTGGACTTCCTTATTGATCGTGCAAAAATGCTACATGTTCAGAGAGTTGGCGATCAGGAAAGGGGAACAACATATGCTGAATCTTATAAAAAGTTACTGCGGAAGACCAACTTGGAAAAGCATACGGCATTGCATGTTGCTGCCCGATATGGTCATCGTCAAGTGGTGATTTTGTTGATAAAAGCGGATCCTGAATTGTGTTGTTCTACTAATAGCAAAAAGGAGTCGCCATTGTTCTTGGCGATCTGCAAGGGTTTTTCTAACATTGCTGGTGACATTTTGGAGGAGCCTTCAATAAGACCTTCTTTCCAAGGAATCAATGGTGTTACAGCCTTACATGCAGCCATCATGGTGTTCAAATATCCTGATATGATCAAAAAAGCTGATGAACTTGGGTGGACACCCTTACACTACGCAGCATTTAGAGGGAACGATAAAGCCGTTACATGGTTGATGGAATCAGACAAGTCTAGTACTTCCTATATCTCGGACAAATGTGGAATGACAGCTCTTCATGTCGCAGCATATAAAGGCCACATCGAAGTAATGAAGAAACTGATTCAATATCAGCCTGATACTTATGAGTGCCTCAATGCCAAAGACCAAACGATTCTTCATGTCGCAGTTTTAGGTGCACAAAGTGATGTTGTGAAGTACATACTGGAGCTACCCGAGCTTCCGAGACTTATAGATCAAGCAGATAAAGAAGGATATACCCCTTTGCATCTAGCTGTCATGGGTCAAAAGCATGAAATTACAAGAATGCTGAAACGGGACTGTGGAGTCGACAATACTTCTCTTCATAAGGGATTCTCTTTTGACAATTTTCTTGGTGAAGATACCAAAATACAGGTTTTGGAGGAGAATATGGCTAACAAAGTGAACGAGCAGGAAATGAGCACTGAGAGTAGTCATCCGGGGCGCTCCTTTGGGGTGCCATCATTCCAAGAACAAATCAGTCGTGATTTCAAGAAATTCGAGTCGCATCCGGATGACAAAGACTCCGGCACATCGGCAGTTGCTGGCAAACCAGAAAATGCGAAATCTGATGTTAATCTACTGATAGCGACACTTATAGCAACAGTTACATTCGCGGCCGGTCTCGCCCCGCCCGGAGGATATGGAGACGACGGAAAGATAATTTTACAAGACAATACAAATTTCAAATGGTTTTTTACATTGAACGTTAACTCGTTCCTGCTCTCAAGCCTGGTTCTTATCCGAGAATCTGGGCCATGCTTGGGCTCCAGACTCTCCAAAGTAGTTGGTCCATTATTGTTTCCCTTTACGGAATGCTTTTCGCATTTTGGCAGGGCACAACAGCAGGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

631

Amino Acids

70.97

Weight (kDa)

8.05

Isoelectric Point (pI)

37.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 108 - 195 1.7e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 219 - 282 4.8e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 316 - 380 6.4e-12 Ankyrin repeats (3 copies)
Ank_4 PF13637 331 - 375 1.3e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 351 - 410 3.1e-10 Ankyrin repeats (3 copies)
Ank_4 PF13637 359 - 408 4.6e-07 Ankyrin repeats (many copies)
Ank_2 PF12796 385 - 452 1.4e-07 Ankyrin repeats (3 copies)
PGG PF13962 534 - 595 2.3e-15 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000319)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18590 FvH4_1g18590 FvH4_3g16140 FvH4_3g16141 FvH4_3g16160
malus_domestica MD02G1193600.v1.1 MD04G1020900.v1.1 MD04G1021000.v1.1 MD05G1212100.v1.1 MD05G1212300.v1.1 MD05G1213100.v1.1 MD05G1213400.v1.1 MD10G1197300.v1.1
prunus_persica Prupe.4G144500_v2.0.a1 Prupe.4G144600_v2.0.a1 Prupe.4G144800_v2.0.a1 Prupe.4G144900_v2.0.a1 Prupe.4G145100_v2.0.a1 Prupe.4G145300_v2.0.a1
pyrus_communis pycom02g15730 pycom02g15740 pycom05g19670 pycom05g19680 pycom10g17020 pycom11g27250
rosa_chinensis RchiOBHm_Chr2g0109301 RchiOBHm_Chr2g0109321 RchiOBHm_Chr2g0109341 RchiOBHm_Chr2g0109381 RchiOBHm_Chr3g0482301 RchiOBHm_Chr5g0027111 RchiOBHm_Chr5g0027121 RchiOBHm_Chr5g0027141 RchiOBHm_Chr5g0027181 RchiOBHm_Chr5g0027241
rosa_laevigata RLG00000017731 RLG00000017732 RLG00000032990 RLG00000032992 RLG00000032993 RLG00000032995 RLG00000032997 RLG00000033002
rosa_multiflora Rmu_sc0000135.1_g000002 Rmu_sc0000332.1_g000010 Rmu_sc0000882.1_g000028 Rmu_sc0000882.1_g000032 Rmu_sc0000882.1_g000033 Rmu_sc0000882.1_g000039 Rmu_sc0000882.1_g000043 Rmu_sc0000882.1_g000046 Rmu_sc0006065.1_g000003 Rmu_sc0006065.1_g000012 Rmu_sc0006065.1_g000018 Rmu_sc0006065.1_g000019 Rmu_sc0006065.1_g000022 Rmu_sc0007497.1_g000002 Rmu_sc0013610.1_g000011 Rmu_sc0015338.1_g000006 Rmu_ssc0000357.1_g000035
rosa_roxburghii Rroxscaffold_1G00052250 Rroxscaffold_1G00052280 Rroxscaffold_1G00052290 Rroxscaffold_1G00052310 Rroxscaffold_1G00052330 Rroxscaffold_1G00052360 Rroxscaffold_1G00052380 Rroxscaffold_1G00052390 Rroxscaffold_2G00134310 Rroxscaffold_2G00134330
rosa_rugosa Rorug02G0159400 Rorug05G0097300 Rorug05G0097500 Rorug05G0097600 Rorug05G0097700 Rorug05G0097700 Rorug05G0097700 Rorug05G0122900
rosa_samantha Rh2AG210900 Rh2AG211200 Rh2AG211500 Rh2BG221200 Rh2BG221800 Rh2CG213100 Rh2CG213200 Rh2CG213600 Rh3CG277900 Rh3CG278000 Rh3CG278600 Rh3DG274600 Rh5BG188600 Rh5BG188700 Rh5BG188900 Rh5BG189100 Rh5BG189200 Rh5BG189400 Rh5CG208400 Rh5CG208500 Rh5CG208700 Rh5CG209000 Rh5CG209100 Rh5CG209400 Rh5CG209700 Rh5CG209800 Rh5CG209900 Rh5CG210000 Rh5DG190500 Rh5DG190700 Rh5DG191200 Rh5DG191500
rosa_wichuraiana Rw3G022160 Rw5G017410 Rw5G017420 Rw5G017450 Rw5G017460 Rw5G017470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 651
AasI GACNNNNNNGTC 1 cut(s) 1346
AccB1I GGYRCC 1 cut(s) 1498
AccI GTMKAC 2 cut(s) 166, 1350
AccII CGCG 1 cut(s) 1658
AccIII TCCGGA 1 cut(s) 1552
AciI CCGC 6 cut(s) 323, 491, 664, 749, 1658, 1673
AclI AACGTT 2 cut(s) 59, 1749
AclWI GGATC 5 cut(s) 261, 299, 312, 746, 759
AcoI YGGCCR 1 cut(s) 1659
AcsI RAATTY 4 cut(s) 158, 437, 1538, 1723
AcuI CTGAAG 1 cut(s) 121
AcyI GRCGYC 1 cut(s) 465
AdeI CACNNNGTG 1 cut(s) 1205
AfaI GTAC 2 cut(s) 1039, 1220
AfiI CCNNNNNNNGG 3 cut(s) 1011, 1679, 1805
AflIII ACRYGT 1 cut(s) 598
AhlI ACTAGT 1 cut(s) 34
AjiI CACGTC 1 cut(s) 108
AjnI CCWGG 1 cut(s) 1773
AjuI GAANNNNNNNTTGG 4 cut(s) 659, 691, 1161, 1193
AluBI AGCT 7 cut(s) 246, 434, 947, 1073, 1231, 1240, 1295
AluI AGCT 7 cut(s) 246, 434, 947, 1073, 1231, 1240, 1295
Alw21I GWGCWC 2 cut(s) 1201, 1466
Alw26I GTCTC 3 cut(s) 1240, 1670, 1683
Alw44I GTGCAC 1 cut(s) 1197
AlwI GGATC 5 cut(s) 261, 299, 312, 746, 759
AlwNI CAGNNNCTG 2 cut(s) 144, 1586
Ama87I CYCGRG 1 cut(s) 1235
Aor13HI TCCGGA 1 cut(s) 1552
AoxI GGCC 3 cut(s) 1096, 1659, 1796
ApaLI GTGCAC 1 cut(s) 1197
ApeKI GCWGC 7 cut(s) 431, 493, 539, 704, 905, 980, 1085
ApoI RAATTY 4 cut(s) 158, 437, 1538, 1723
AspLEI GCGC 1 cut(s) 1488
AspS9I GGNCC 2 cut(s) 1796, 1832
AsuC2I CCSGG 2 cut(s) 1482, 1677
AsuHPI GGTGA 7 cut(s) 347, 380, 416, 530, 742, 848, 1409
AvaI CYCGRG 1 cut(s) 1235
AvaII GGWCC 1 cut(s) 1832
BaeGI GKGCMC 3 cut(s) 26, 1201, 1882
BamHI GGATCC 2 cut(s) 304, 751
BanI GGYRCC 1 cut(s) 1498
BanII GRGCYC 1 cut(s) 1811
BbsI GAAGAC 1 cut(s) 674
Bbv12I GWGCWC 2 cut(s) 1201, 1466
BbvI GCAGC 7 cut(s) 443, 480, 526, 691, 917, 992, 1097
BccI CCATC 8 cut(s) 13, 244, 295, 359, 508, 917, 1012, 1510
BceAI ACGGC 2 cut(s) 705, 989
BciT130I CCWGG 1 cut(s) 1775
BclI TGATCA 1 cut(s) 936
BcnI CCSGG 2 cut(s) 1482, 1677
BcoDI GTCTC 3 cut(s) 1240, 1670, 1683
BcuI ACTAGT 1 cut(s) 34
BfaI CTAG 4 cut(s) 29, 35, 1035, 1292
BfoI RGCGCY 1 cut(s) 1489
BglII AGATCT 1 cut(s) 129
BisI GCNGC 9 cut(s) 324, 432, 494, 540, 705, 906, 981, 1086, 1659
BlsI GCNGC 9 cut(s) 325, 433, 495, 541, 706, 907, 982, 1087, 1660
BmcAI AGTACT 1 cut(s) 1039
Bme1390I CCNGG 3 cut(s) 1482, 1677, 1775
Bme18I GGWCC 1 cut(s) 1832
BmeT110I CYCGRG 1 cut(s) 1235
BmgBI CACGTC 1 cut(s) 108
BmgT120I GGNCC 2 cut(s) 1796, 1832
BmiI GGNNCC 5 cut(s) 306, 753, 852, 1500, 1810
BmrFI CCNGG 3 cut(s) 1482, 1677, 1775
BmsI GCATC 3 cut(s) 542, 1297, 1558
BpiI GAAGAC 1 cut(s) 674
BplI GAGNNNNNCTC 2 cut(s) 470, 502
BpmI CTGGAG 2 cut(s) 1247, 1795
BpuEI CTTGAG 1 cut(s) 1753
BpuMI CCSGG 2 cut(s) 1482, 1677
BsaBI GATNNNNATC 2 cut(s) 227, 1617
BsaHI GRCGYC 1 cut(s) 465
BsaI GGTCTC 1 cut(s) 1670
BsaJI CCNNGG 2 cut(s) 874, 1481
BsaWI WCCGGW 1 cut(s) 1552
BsaXI ACNNNNNCTCC 2 cut(s) 1550, 1580
Bsc4I CCNNNNNNNGG 3 cut(s) 1011, 1679, 1805
Bse118I RCCGGY 1 cut(s) 1661
Bse1I ACTGG 2 cut(s) 71, 1230
Bse3DI GCAATG 3 cut(s) 534, 692, 828
Bse8I GATNNNNATC 2 cut(s) 227, 1617
BseAI TCCGGA 1 cut(s) 1552
BseBI CCWGG 1 cut(s) 1775
BseDI CCNNGG 2 cut(s) 874, 1481
BseGI GGATG 6 cut(s) 255, 306, 557, 1477, 1549, 1561
BseJI GATNNNNATC 2 cut(s) 227, 1617
BseLI CCNNNNNNNGG 3 cut(s) 1011, 1679, 1805
BseMI GCAATG 3 cut(s) 534, 692, 828
BseMII CTCAG 2 cut(s) 403, 1458
BseNI ACTGG 2 cut(s) 71, 1230
BseRI GAGGAG 2 cut(s) 863, 1439
BseSI GKGCMC 3 cut(s) 26, 1201, 1882
BseX3I CGGCCG 1 cut(s) 1659
BseXI GCAGC 7 cut(s) 443, 480, 526, 691, 917, 992, 1097
BsgI GTGCAG 1 cut(s) 59
Bsh1236I CGCG 1 cut(s) 1658
Bsh1285I CGRYCG 1 cut(s) 1662
BshFI GGCC 3 cut(s) 1098, 1661, 1798
BshNI GGYRCC 1 cut(s) 1498
BsiEI CGRYCG 1 cut(s) 1662
BsiHKAI GWGCWC 2 cut(s) 1201, 1466
BsiHKCI CYCGRG 1 cut(s) 1235
BsiSI CCGG 6 cut(s) 298, 1481, 1553, 1569, 1662, 1677
BslFI GGGAC 2 cut(s) 452, 1352
BslI CCNNNNNNNGG 3 cut(s) 1011, 1679, 1805
BsmAI GTCTC 3 cut(s) 1240, 1670, 1683
BsmBI CGTCTC 1 cut(s) 1683
BsmFI GGGAC 2 cut(s) 452, 1352
BsmI GAATGC 2 cut(s) 1332, 1862
BsnI GGCC 3 cut(s) 1098, 1661, 1798
Bso31I GGTCTC 1 cut(s) 1670
BsoBI CYCGRG 1 cut(s) 1235
Bsp1286I GDGCHC 5 cut(s) 26, 1201, 1466, 1811, 1882
Bsp13I TCCGGA 1 cut(s) 1552
BspACI CCGC 6 cut(s) 323, 491, 664, 749, 1658, 1673
BspANI GGCC 3 cut(s) 1098, 1661, 1798
BspCNI CTCAG 2 cut(s) 402, 1459
BspEI TCCGGA 1 cut(s) 1552
BspFNI CGCG 1 cut(s) 1658
BspLI GGNNCC 5 cut(s) 306, 753, 852, 1500, 1810
BspPI GGATC 5 cut(s) 261, 299, 312, 746, 759
BspQI GCTCTTC 1 cut(s) 1080
BspT107I GGYRCC 1 cut(s) 1498
BspTNI GGTCTC 1 cut(s) 1670
BsrDI GCAATG 3 cut(s) 534, 692, 828
BsrFI RCCGGY 1 cut(s) 1661
BsrI ACTGG 2 cut(s) 71, 1230
BssAI RCCGGY 1 cut(s) 1661
BssECI CCNNGG 2 cut(s) 874, 1481
BssNI GRCGYC 1 cut(s) 465
BssT1I CCWWGG 1 cut(s) 874
Bst2UI CCWGG 1 cut(s) 1775
Bst4CI ACNGT 2 cut(s) 1343, 1648
Bst6I CTCTTC 2 cut(s) 1080, 1368
BstACI GRCGYC 1 cut(s) 465
BstC8I GCNNGC 1 cut(s) 1588
BstDEI CTNAG 2 cut(s) 389, 1467
BstF5I GGATG 6 cut(s) 255, 306, 557, 1477, 1549, 1561
BstFNI CGCG 1 cut(s) 1658
BstH2I RGCGCY 1 cut(s) 1489
BstHHI GCGC 1 cut(s) 1488
BstMAI GTCTC 3 cut(s) 1240, 1670, 1683
BstMCI CGRYCG 1 cut(s) 1662
BstMWI GCNNNNNNNGC 5 cut(s) 150, 208, 902, 1237, 1667
BstNI CCWGG 1 cut(s) 1775
BstNSI RCATGY 4 cut(s) 15, 602, 701, 905
BstSCI CCNGG 3 cut(s) 1480, 1675, 1773
BstSLI GKGCMC 3 cut(s) 26, 1201, 1882
BstUI CGCG 1 cut(s) 1658
BstV1I GCAGC 7 cut(s) 443, 480, 526, 691, 917, 992, 1097
BstV2I GAAGAC 1 cut(s) 674
BstX2I RGATCY 3 cut(s) 129, 304, 751
BstYI RGATCY 3 cut(s) 129, 304, 751
BstZI CGGCCG 1 cut(s) 1659
BsuRI GGCC 3 cut(s) 1098, 1661, 1798
BtrI CACGTC 1 cut(s) 108
BtsCI GGATG 6 cut(s) 255, 306, 557, 1477, 1549, 1561
BtsIMutI CAGTG 2 cut(s) 128, 1464
Cac8I GCNNGC 1 cut(s) 1588
CaiI CAGNNNCTG 2 cut(s) 144, 1586
CfoI GCGC 1 cut(s) 1488
Cfr10I RCCGGY 1 cut(s) 1661
Cfr13I GGNCC 2 cut(s) 1796, 1832
CseI GACGC 2 cut(s) 83, 454
Csp6I GTAC 2 cut(s) 1038, 1219
CviQI GTAC 2 cut(s) 1038, 1219
DdeI CTNAG 2 cut(s) 389, 1467
DraIII CACNNNGTG 1 cut(s) 1205
DrdI GACNNNNNNGTC 1 cut(s) 1346
DseDI GACNNNNNNGTC 1 cut(s) 1346
EaeI YGGCCR 1 cut(s) 1659
EagI CGGCCG 1 cut(s) 1659
Eam1104I CTCTTC 2 cut(s) 1080, 1368
EarI CTCTTC 2 cut(s) 1080, 1368
EclXI CGGCCG 1 cut(s) 1659
Eco130I CCWWGG 1 cut(s) 874
Eco24I GRGCYC 1 cut(s) 1811
Eco31I GGTCTC 1 cut(s) 1670
Eco47I GGWCC 1 cut(s) 1832
Eco52I CGGCCG 1 cut(s) 1659
Eco57I CTGAAG 1 cut(s) 121
Eco88I CYCGRG 1 cut(s) 1235
EcoRI GAATTC 1 cut(s) 437
EcoRII CCWGG 1 cut(s) 1773
EcoT14I CCWWGG 1 cut(s) 874
EcoT38I GRGCYC 1 cut(s) 1811
ErhI CCWWGG 1 cut(s) 874
Esp3I CGTCTC 1 cut(s) 1683
FalI AAGNNNNNCTT 4 cut(s) 659, 691, 853, 885
FaqI GGGAC 2 cut(s) 452, 1352
FauI CCCGC 1 cut(s) 1680
FauNDI CATATG 1 cut(s) 637
FbaI TGATCA 1 cut(s) 936
FblI GTMKAC 2 cut(s) 166, 1350
Fnu4HI GCNGC 9 cut(s) 324, 432, 494, 540, 705, 906, 981, 1086, 1659
FokI GGATG 6 cut(s) 262, 313, 564, 1464, 1536, 1568
FriOI GRGCYC 1 cut(s) 1811
Fsp4HI GCNGC 9 cut(s) 324, 432, 494, 540, 705, 906, 981, 1086, 1659
FspBI CTAG 4 cut(s) 29, 35, 1035, 1292
GlaI GCGC 1 cut(s) 1487
GluI GCNGC 9 cut(s) 324, 432, 494, 540, 705, 906, 981, 1086, 1659
GsuI CTGGAG 2 cut(s) 1247, 1795
HaeII RGCGCY 1 cut(s) 1489
HaeIII GGCC 3 cut(s) 1098, 1661, 1798
HapII CCGG 6 cut(s) 298, 1481, 1553, 1569, 1662, 1677
HgaI GACGC 2 cut(s) 83, 454
HhaI GCGC 1 cut(s) 1488
Hin1I GRCGYC 1 cut(s) 465
Hin6I GCGC 1 cut(s) 1486
HinP1I GCGC 1 cut(s) 1486
HincII GTYRAC 2 cut(s) 1351, 1753
HindII GTYRAC 2 cut(s) 1351, 1753
HpaI GTTAAC 1 cut(s) 1753
HpaII CCGG 6 cut(s) 298, 1481, 1553, 1569, 1662, 1677
HphI GGTGA 7 cut(s) 347, 380, 416, 530, 742, 848, 1409
Hpy166II GTNNAC 7 cut(s) 167, 568, 963, 1199, 1351, 1447, 1753
Hpy188I TCNGA 7 cut(s) 73, 606, 1027, 1054, 1245, 1612, 1787
Hpy188III TCNNGA 7 cut(s) 620, 755, 929, 1526, 1534, 1553, 1812
Hpy8I GTNNAC 7 cut(s) 167, 568, 963, 1199, 1351, 1447, 1753
Hpy99I CGWCG 1 cut(s) 1697
HpyAV CCTTC 5 cut(s) 318, 480, 864, 876, 1265
HpyCH4III ACNGT 2 cut(s) 1343, 1648
HpyCH4IV ACGT 4 cut(s) 59, 83, 107, 1749
HpyF10VI GCNNNNNNNGC 5 cut(s) 150, 208, 902, 1237, 1667
HpyF3I CTNAG 2 cut(s) 389, 1467
HpySE526I ACGT 4 cut(s) 59, 83, 107, 1749
Hsp92I GRCGYC 1 cut(s) 465
HspAI GCGC 1 cut(s) 1486
Kpn2I TCCGGA 1 cut(s) 1552
Ksp22I TGATCA 1 cut(s) 936
KspAI GTTAAC 1 cut(s) 1753
LguI GCTCTTC 1 cut(s) 1080
LmnI GCTCC 5 cut(s) 207, 850, 1228, 1493, 1814
Lsp1109I GCAGC 7 cut(s) 443, 480, 526, 691, 917, 992, 1097
LweI GCATC 3 cut(s) 542, 1297, 1558
MaeI CTAG 4 cut(s) 29, 35, 1035, 1292
MaeII ACGT 4 cut(s) 59, 83, 107, 1749
MaeIII GTNAC 5 cut(s) 657, 836, 889, 1006, 1648
MfeI CAATTG 1 cut(s) 111
MflI RGATCY 3 cut(s) 129, 304, 751
MhlI GDGCHC 5 cut(s) 26, 1201, 1466, 1811, 1882
MlyI GAGTC 5 cut(s) 797, 1356, 1553, 1559, 1809
MnlI CCTC 5 cut(s) 841, 983, 1163, 1417, 1673
MroI TCCGGA 1 cut(s) 1552
MseI TTAA 4 cut(s) 177, 227, 1617, 1752
MslI CAYNNNNRTG 2 cut(s) 914, 1554
MspA1I CMGCKG 2 cut(s) 434, 493
MspI CCGG 6 cut(s) 298, 1481, 1553, 1569, 1662, 1677
MspR9I CCNGG 3 cut(s) 1482, 1677, 1775
MunI CAATTG 1 cut(s) 111
Mva1269I GAATGC 2 cut(s) 1332, 1862
MvaI CCWGG 1 cut(s) 1775
MvnI CGCG 1 cut(s) 1658
MwoI GCNNNNNNNGC 5 cut(s) 150, 208, 902, 1237, 1667
NciI CCSGG 2 cut(s) 1482, 1677
NdeI CATATG 1 cut(s) 637
NlaIV GGNNCC 5 cut(s) 306, 753, 852, 1500, 1810
NmuCI GTSAC 1 cut(s) 836
NspI RCATGY 4 cut(s) 15, 602, 701, 905
PciI ACATGT 1 cut(s) 598
PciSI GCTCTTC 1 cut(s) 1080
PcsI WCGNNNNNNNCGW 1 cut(s) 1002
PctI GAATGC 2 cut(s) 1332, 1862
PfeI GAWTC 7 cut(s) 644, 879, 1022, 1123, 1174, 1374, 1790
PkrI GCNGC 9 cut(s) 325, 433, 495, 541, 706, 907, 982, 1087, 1660
PleI GAGTC 5 cut(s) 796, 1355, 1552, 1559, 1809
PpsI GAGTC 5 cut(s) 796, 1355, 1552, 1559, 1809
PscI ACATGT 1 cut(s) 598
PsiI TTATAA 1 cut(s) 651
Psp1406I AACGTT 2 cut(s) 59, 1749
Psp6I CCWGG 1 cut(s) 1773
PspGI CCWGG 1 cut(s) 1773
PspN4I GGNNCC 5 cut(s) 306, 753, 852, 1500, 1810
PspPI GGNCC 2 cut(s) 1796, 1832
PstNI CAGNNNCTG 2 cut(s) 144, 1586
PsuI RGATCY 3 cut(s) 129, 304, 751
PvuII CAGCTG 1 cut(s) 434
RsaI GTAC 2 cut(s) 1039, 1220
RsaNI GTAC 2 cut(s) 1038, 1219
RseI CAYNNNNRTG 2 cut(s) 914, 1554
SalI GTCGAC 1 cut(s) 1349
SapI GCTCTTC 1 cut(s) 1080
SaqAI TTAA 4 cut(s) 177, 227, 1617, 1752
SatI GCNGC 9 cut(s) 324, 432, 494, 540, 705, 906, 981, 1086, 1659
Sau96I GGNCC 2 cut(s) 1796, 1832
ScaI AGTACT 1 cut(s) 1039
SchI GAGTC 5 cut(s) 797, 1356, 1553, 1559, 1809
ScrFI CCNGG 3 cut(s) 1482, 1677, 1775
SduI GDGCHC 5 cut(s) 26, 1201, 1466, 1811, 1882
SfaNI GCATC 3 cut(s) 542, 1297, 1558
SinI GGWCC 1 cut(s) 1832
SmiMI CAYNNNNRTG 2 cut(s) 914, 1554
SmlI CTYRAG 1 cut(s) 1768
SmoI CTYRAG 1 cut(s) 1768
SpeI ACTAGT 1 cut(s) 34
SsiI CCGC 6 cut(s) 323, 491, 664, 749, 1658, 1673
SspI AATATT 1 cut(s) 93
SspMI CTAG 4 cut(s) 29, 35, 1035, 1292
StyD4I CCNGG 3 cut(s) 1480, 1675, 1773
StyI CCWWGG 1 cut(s) 874
TaaI ACNGT 2 cut(s) 1343, 1648
TaiI ACGT 4 cut(s) 62, 86, 110, 1752
TaqI TCGA 6 cut(s) 231, 277, 377, 1104, 1350, 1542
TatI WGTACW 2 cut(s) 1037, 1218
TauI GCSGC 2 cut(s) 326, 1661
TfiI GAWTC 7 cut(s) 644, 879, 1022, 1123, 1174, 1374, 1790
Tru1I TTAA 4 cut(s) 177, 227, 1617, 1752
Tru9I TTAA 4 cut(s) 177, 227, 1617, 1752
TscAI CASTG 2 cut(s) 128, 1471
TseFI GTSAC 1 cut(s) 836
TseI GCWGC 7 cut(s) 431, 493, 539, 704, 905, 980, 1085
Tsp45I GTSAC 1 cut(s) 836
TspDTI ATGAA 7 cut(s) 85, 966, 1067, 1127, 1169, 1329, 1355
TspGWI ACGGA 3 cut(s) 194, 1710, 1868
TspRI CASTG 2 cut(s) 128, 1471
VneI GTGCAC 1 cut(s) 1197
VpaK11BI GGWCC 1 cut(s) 1832
XapI RAATTY 4 cut(s) 158, 437, 1538, 1723
XceI RCATGY 4 cut(s) 15, 602, 701, 905
XcmI CCANNNNNNNNNTGG 1 cut(s) 881
XmiI GTMKAC 2 cut(s) 166, 1350
XspI CTAG 4 cut(s) 29, 35, 1035, 1292
ZrmI AGTACT 1 cut(s) 1039
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.