Rh5DG190700

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0000319
Physical Location & Seq
Forward (+)
21133865 .. 21139198
5334 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG190700.1

Sequence Viewer

Length: 1635 bp
ATGGATCCTTCTATGTATAGGGCGGCAACTTGTGGTGATGTTGGTTTCTTGCAAAGAATTAGAGATGGTGATGTATCGACTGATCTTCTCAGTCAAAAAACCCCAAAGGGCAACAACATTCTTCACCTTGCAGCTGAATTCAAGCAGATCAATTTCTTCAAAGGCGTCCCTTCCTTTGAGAAAGGCTCTCCGCTGCTTTGGAACATCAACAAGATGGGTGATACCCCCTTGCACATTGCTGCAAGAGTAGGATGCGTTGAATTGGTGGACTTCCTTATTGATCGTGCAAAAATGCTACATGTTCAGAGAGTTGGCGATCAGGAAAGGGGAACAACATATGCTGAATCTTATAAAAAGTTACTGCGGAAGACCAACTTGGAAAAGCATACGGCATTGCATGTTGCTGCCCGATATGGTCATCGTCAAGTGGTGATTTTGTTGATAAAAGCGGATCCTGAATTGTGTTGTTCTACTAATAGCAAAAAGGAGTCGCCATTGTTCTTGGCGATCTGCAAGGGTTTTTCTAACATTGCTGGTGACATTTTGGAGGAGCCTTCAATAAGACCTTCTTTCCAAGGAATCAATGGTGTTACAGCCTTACATGCAGCCGTAACTTATACATACCAAGGCTCTGAAGAGATTGTGAAGATCATGGTGTTCAAATATCCTGATATGATCAAAAAAGCTGATGAACTTGGGTGGACACCCTTACACTACGCAGCATTTAGAGGGAACGATAAAGCCGTTACATGGTTGATGGAATCAGACAAGTCTAGTACTTCCTATATCTCGGACAAATGTGGAATGACAGCTCTTCATGTCGCAGCATATAAAGGCCACATCGAAGTAATGAAGAAACTGATTCAATATCAGCCTGATACTTATGAGTGCCTCAATGCCAAAGACCAAACGATTCTTCATGTCGCAGTTTTAGGTGCACAAAGTGATGTTGTGAAGTACATACTGGAGCTACCCGAGCTTCCGAGACTTATAGATCAAGCAGATAAAGAAGGATATACCCCTTTGCATCTAGCTGTCATGGGTCAAAAGCATGAAATTACAAGAATGCTGAAACGGGACTGTGGAGTCGACAATACTTCTCTTCATAAGGGATTCTCTTTTGACAATTTTCTTGGTGAAGATACCAAAATACAGGTTTTGGAGGAGAATATGGCTAACAAAGTGAACGAGCAGGAAATGAGCACTGAGAGTAGTCATCCGGGGCGCTCCTTTGGGGTGCCATCATTCCAAGAACAAATCAGTCGTGATTTCAAGAAATTCGAGTCGCATCCGGATGACAAAGACTCCGGCACATCGGCAGTTGCTGGCAAACCAGAAAATGCGAAATCTGATGTTAATCTACTGATAGCGACACTTATAGCAACAGTTACATTCGCGGCCGGTCTCGCCCCGCCCGGAGGATATGGAGACGACGGAAAGATAATTTTACAAGACAATACAAATTTCAAATGGTTTTTTACATTGAACGTTAACTCGTTCCTGCTCTCAAGCCTGGTTCTTATCCGAGAATCTGGGCCATGCTTGGGCTCCAGACTCTCCAAAGTAGTTGGTCCATTATTGTTTCCCTTTACGGAATGCTTTTCGCATTTTGGCAGGGCACAACAGCAGGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

544

Amino Acids

60.36

Weight (kDa)

6.63

Isoelectric Point (pI)

34.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 8 - 95 1.3e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 119 - 182 3.8e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 194 - 256 4e-09 Ankyrin repeats (3 copies)
Ank_4 PF13637 237 - 288 3.6e-10 Ankyrin repeats (many copies)
Ank_2 PF12796 264 - 323 2.4e-10 Ankyrin repeats (3 copies)
Ank_4 PF13637 272 - 321 3.8e-07 Ankyrin repeats (many copies)
Ank_2 PF12796 300 - 365 2e-07 Ankyrin repeats (3 copies)
PGG PF13962 447 - 508 1.9e-15 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000319)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18590 FvH4_1g18590 FvH4_3g16140 FvH4_3g16141 FvH4_3g16160
malus_domestica MD02G1193600.v1.1 MD04G1020900.v1.1 MD04G1021000.v1.1 MD05G1212100.v1.1 MD05G1212300.v1.1 MD05G1213100.v1.1 MD05G1213400.v1.1 MD10G1197300.v1.1
prunus_persica Prupe.4G144500_v2.0.a1 Prupe.4G144600_v2.0.a1 Prupe.4G144800_v2.0.a1 Prupe.4G144900_v2.0.a1 Prupe.4G145100_v2.0.a1 Prupe.4G145300_v2.0.a1
pyrus_communis pycom02g15730 pycom02g15740 pycom05g19670 pycom05g19680 pycom10g17020 pycom11g27250
rosa_chinensis RchiOBHm_Chr2g0109301 RchiOBHm_Chr2g0109321 RchiOBHm_Chr2g0109341 RchiOBHm_Chr2g0109381 RchiOBHm_Chr3g0482301 RchiOBHm_Chr5g0027111 RchiOBHm_Chr5g0027121 RchiOBHm_Chr5g0027141 RchiOBHm_Chr5g0027181 RchiOBHm_Chr5g0027241
rosa_laevigata RLG00000017731 RLG00000017732 RLG00000032990 RLG00000032992 RLG00000032993 RLG00000032995 RLG00000032997 RLG00000033002
rosa_multiflora Rmu_sc0000135.1_g000002 Rmu_sc0000332.1_g000010 Rmu_sc0000882.1_g000028 Rmu_sc0000882.1_g000032 Rmu_sc0000882.1_g000033 Rmu_sc0000882.1_g000039 Rmu_sc0000882.1_g000043 Rmu_sc0000882.1_g000046 Rmu_sc0006065.1_g000003 Rmu_sc0006065.1_g000012 Rmu_sc0006065.1_g000018 Rmu_sc0006065.1_g000019 Rmu_sc0006065.1_g000022 Rmu_sc0007497.1_g000002 Rmu_sc0013610.1_g000011 Rmu_sc0015338.1_g000006 Rmu_ssc0000357.1_g000035
rosa_roxburghii Rroxscaffold_1G00052250 Rroxscaffold_1G00052280 Rroxscaffold_1G00052290 Rroxscaffold_1G00052310 Rroxscaffold_1G00052330 Rroxscaffold_1G00052360 Rroxscaffold_1G00052380 Rroxscaffold_1G00052390 Rroxscaffold_2G00134310 Rroxscaffold_2G00134330
rosa_rugosa Rorug02G0159400 Rorug05G0097300 Rorug05G0097500 Rorug05G0097600 Rorug05G0097700 Rorug05G0097700 Rorug05G0097700 Rorug05G0122900
rosa_samantha Rh2AG210900 Rh2AG211200 Rh2AG211500 Rh2BG221200 Rh2BG221800 Rh2CG213100 Rh2CG213200 Rh2CG213600 Rh3CG277900 Rh3CG278000 Rh3CG278600 Rh3DG274600 Rh5BG188600 Rh5BG188700 Rh5BG188900 Rh5BG189100 Rh5BG189200 Rh5BG189400 Rh5CG208400 Rh5CG208500 Rh5CG208700 Rh5CG209000 Rh5CG209100 Rh5CG209400 Rh5CG209700 Rh5CG209800 Rh5CG209900 Rh5CG210000 Rh5DG190500 Rh5DG190700 Rh5DG191200 Rh5DG191500
rosa_wichuraiana Rw3G022160 Rw5G017410 Rw5G017420 Rw5G017450 Rw5G017460 Rw5G017470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 351
AasI GACNNNNNNGTC 1 cut(s) 1085
AccB1I GGYRCC 1 cut(s) 1237
AccI GTMKAC 1 cut(s) 1089
AccII CGCG 1 cut(s) 1397
AccIII TCCGGA 1 cut(s) 1291
AciI CCGC 6 cut(s) 23, 191, 364, 449, 1397, 1412
AclI AACGTT 1 cut(s) 1488
AclWI GGATC 3 cut(s) 12, 446, 459
AcoI YGGCCR 1 cut(s) 1398
AcsI RAATTY 3 cut(s) 137, 1277, 1462
AcuI CTGAAG 1 cut(s) 654
AcyI GRCGYC 1 cut(s) 165
AdeI CACNNNGTG 1 cut(s) 944
AfaI GTAC 2 cut(s) 778, 959
AfiI CCNNNNNNNGG 3 cut(s) 750, 1418, 1544
AflIII ACRYGT 1 cut(s) 298
AgsI TTSAA 9 cut(s) 142, 160, 260, 558, 661, 866, 1273, 1468, 1486
AjnI CCWGG 1 cut(s) 1512
AjuI GAANNNNNNNTTGG 4 cut(s) 359, 391, 900, 932
AluBI AGCT 6 cut(s) 134, 686, 812, 970, 979, 1034
AluI AGCT 6 cut(s) 134, 686, 812, 970, 979, 1034
Alw21I GWGCWC 2 cut(s) 940, 1205
Alw26I GTCTC 3 cut(s) 979, 1409, 1422
Alw44I GTGCAC 1 cut(s) 936
AlwI GGATC 3 cut(s) 12, 446, 459
AlwNI CAGNNNCTG 1 cut(s) 1325
Ama87I CYCGRG 1 cut(s) 974
Aor13HI TCCGGA 1 cut(s) 1291
AoxI GGCC 3 cut(s) 835, 1398, 1535
ApaLI GTGCAC 1 cut(s) 936
ApeKI GCWGC 7 cut(s) 131, 193, 239, 404, 605, 719, 824
ApoI RAATTY 3 cut(s) 137, 1277, 1462
AspLEI GCGC 1 cut(s) 1227
AspS9I GGNCC 2 cut(s) 1535, 1571
AsuC2I CCSGG 2 cut(s) 1221, 1416
AsuHPI GGTGA 7 cut(s) 47, 80, 116, 230, 442, 548, 1148
AvaI CYCGRG 1 cut(s) 974
AvaII GGWCC 1 cut(s) 1571
BaeGI GKGCMC 2 cut(s) 940, 1621
BamHI GGATCC 2 cut(s) 4, 451
BanI GGYRCC 1 cut(s) 1237
BanII GRGCYC 1 cut(s) 1550
BbsI GAAGAC 1 cut(s) 374
Bbv12I GWGCWC 2 cut(s) 940, 1205
BbvI GCAGC 7 cut(s) 143, 180, 226, 391, 617, 731, 836
BccI CCATC 4 cut(s) 59, 208, 751, 1249
BceAI ACGGC 3 cut(s) 405, 593, 728
BciT130I CCWGG 1 cut(s) 1514
BclI TGATCA 1 cut(s) 675
BcnI CCSGG 2 cut(s) 1221, 1416
BcoDI GTCTC 3 cut(s) 979, 1409, 1422
BfaI CTAG 2 cut(s) 774, 1031
BfoI RGCGCY 1 cut(s) 1228
BisI GCNGC 9 cut(s) 24, 132, 194, 240, 405, 606, 720, 825, 1398
BlsI GCNGC 9 cut(s) 25, 133, 195, 241, 406, 607, 721, 826, 1399
BmcAI AGTACT 1 cut(s) 778
Bme1390I CCNGG 3 cut(s) 1221, 1416, 1514
Bme18I GGWCC 1 cut(s) 1571
BmeT110I CYCGRG 1 cut(s) 974
BmgT120I GGNCC 2 cut(s) 1535, 1571
BmiI GGNNCC 5 cut(s) 6, 453, 552, 1239, 1549
BmrFI CCNGG 3 cut(s) 1221, 1416, 1514
BmsI GCATC 3 cut(s) 242, 1036, 1297
BpiI GAAGAC 1 cut(s) 374
BplI GAGNNNNNCTC 2 cut(s) 170, 202
BpmI CTGGAG 2 cut(s) 986, 1534
BpuEI CTTGAG 1 cut(s) 1492
BpuMI CCSGG 2 cut(s) 1221, 1416
BsaBI GATNNNNATC 1 cut(s) 1356
BsaHI GRCGYC 1 cut(s) 165
BsaI GGTCTC 1 cut(s) 1409
BsaJI CCNNGG 3 cut(s) 574, 625, 1220
BsaWI WCCGGW 1 cut(s) 1291
BsaXI ACNNNNNCTCC 2 cut(s) 1289, 1319
Bsc4I CCNNNNNNNGG 3 cut(s) 750, 1418, 1544
Bse118I RCCGGY 1 cut(s) 1400
Bse1I ACTGG 1 cut(s) 969
Bse3DI GCAATG 3 cut(s) 234, 392, 528
Bse8I GATNNNNATC 1 cut(s) 1356
BseAI TCCGGA 1 cut(s) 1291
BseBI CCWGG 1 cut(s) 1514
BseDI CCNNGG 3 cut(s) 574, 625, 1220
BseGI GGATG 4 cut(s) 257, 1216, 1288, 1300
BseJI GATNNNNATC 1 cut(s) 1356
BseLI CCNNNNNNNGG 3 cut(s) 750, 1418, 1544
BseMI GCAATG 3 cut(s) 234, 392, 528
BseMII CTCAG 2 cut(s) 103, 1197
BseNI ACTGG 1 cut(s) 969
BseRI GAGGAG 2 cut(s) 563, 1178
BseSI GKGCMC 2 cut(s) 940, 1621
BseX3I CGGCCG 1 cut(s) 1398
BseXI GCAGC 7 cut(s) 143, 180, 226, 391, 617, 731, 836
Bsh1236I CGCG 1 cut(s) 1397
Bsh1285I CGRYCG 1 cut(s) 1401
BshFI GGCC 3 cut(s) 837, 1400, 1537
BshNI GGYRCC 1 cut(s) 1237
BsiEI CGRYCG 1 cut(s) 1401
BsiHKAI GWGCWC 2 cut(s) 940, 1205
BsiHKCI CYCGRG 1 cut(s) 974
BsiSI CCGG 5 cut(s) 1220, 1292, 1308, 1401, 1416
BslFI GGGAC 2 cut(s) 152, 1091
BslI CCNNNNNNNGG 3 cut(s) 750, 1418, 1544
BsmAI GTCTC 3 cut(s) 979, 1409, 1422
BsmBI CGTCTC 1 cut(s) 1422
BsmFI GGGAC 2 cut(s) 152, 1091
BsmI GAATGC 2 cut(s) 1071, 1601
BsnI GGCC 3 cut(s) 837, 1400, 1537
Bso31I GGTCTC 1 cut(s) 1409
BsoBI CYCGRG 1 cut(s) 974
Bsp1286I GDGCHC 4 cut(s) 940, 1205, 1550, 1621
Bsp13I TCCGGA 1 cut(s) 1291
BspACI CCGC 6 cut(s) 23, 191, 364, 449, 1397, 1412
BspANI GGCC 3 cut(s) 837, 1400, 1537
BspCNI CTCAG 2 cut(s) 102, 1198
BspEI TCCGGA 1 cut(s) 1291
BspFNI CGCG 1 cut(s) 1397
BspLI GGNNCC 5 cut(s) 6, 453, 552, 1239, 1549
BspPI GGATC 3 cut(s) 12, 446, 459
BspQI GCTCTTC 1 cut(s) 819
BspT107I GGYRCC 1 cut(s) 1237
BspTNI GGTCTC 1 cut(s) 1409
BsrDI GCAATG 3 cut(s) 234, 392, 528
BsrFI RCCGGY 1 cut(s) 1400
BsrI ACTGG 1 cut(s) 969
BssAI RCCGGY 1 cut(s) 1400
BssECI CCNNGG 3 cut(s) 574, 625, 1220
BssNI GRCGYC 1 cut(s) 165
BssT1I CCWWGG 2 cut(s) 574, 625
Bst2UI CCWGG 1 cut(s) 1514
Bst4CI ACNGT 2 cut(s) 1082, 1387
Bst6I CTCTTC 3 cut(s) 630, 819, 1107
BstACI GRCGYC 1 cut(s) 165
BstC8I GCNNGC 1 cut(s) 1327
BstDEI CTNAG 2 cut(s) 89, 1206
BstF5I GGATG 4 cut(s) 257, 1216, 1288, 1300
BstFNI CGCG 1 cut(s) 1397
BstH2I RGCGCY 1 cut(s) 1228
BstHHI GCGC 1 cut(s) 1227
BstMAI GTCTC 3 cut(s) 979, 1409, 1422
BstMCI CGRYCG 1 cut(s) 1401
BstMWI GCNNNNNNNGC 3 cut(s) 602, 976, 1406
BstNI CCWGG 1 cut(s) 1514
BstNSI RCATGY 3 cut(s) 302, 401, 605
BstSCI CCNGG 3 cut(s) 1219, 1414, 1512
BstSLI GKGCMC 2 cut(s) 940, 1621
BstUI CGCG 1 cut(s) 1397
BstV1I GCAGC 7 cut(s) 143, 180, 226, 391, 617, 731, 836
BstV2I GAAGAC 1 cut(s) 374
BstX2I RGATCY 2 cut(s) 4, 451
BstYI RGATCY 2 cut(s) 4, 451
BstZI CGGCCG 1 cut(s) 1398
BsuRI GGCC 3 cut(s) 837, 1400, 1537
BtsCI GGATG 4 cut(s) 257, 1216, 1288, 1300
BtsIMutI CAGTG 1 cut(s) 1203
Cac8I GCNNGC 1 cut(s) 1327
CaiI CAGNNNCTG 1 cut(s) 1325
CfoI GCGC 1 cut(s) 1227
Cfr10I RCCGGY 1 cut(s) 1400
Cfr13I GGNCC 2 cut(s) 1535, 1571
CseI GACGC 1 cut(s) 154
Csp6I GTAC 2 cut(s) 777, 958
CviQI GTAC 2 cut(s) 777, 958
DdeI CTNAG 2 cut(s) 89, 1206
DraIII CACNNNGTG 1 cut(s) 944
DrdI GACNNNNNNGTC 1 cut(s) 1085
DseDI GACNNNNNNGTC 1 cut(s) 1085
EaeI YGGCCR 1 cut(s) 1398
EagI CGGCCG 1 cut(s) 1398
Eam1104I CTCTTC 3 cut(s) 630, 819, 1107
EarI CTCTTC 3 cut(s) 630, 819, 1107
EclXI CGGCCG 1 cut(s) 1398
Eco130I CCWWGG 2 cut(s) 574, 625
Eco24I GRGCYC 1 cut(s) 1550
Eco31I GGTCTC 1 cut(s) 1409
Eco47I GGWCC 1 cut(s) 1571
Eco52I CGGCCG 1 cut(s) 1398
Eco57I CTGAAG 1 cut(s) 654
Eco88I CYCGRG 1 cut(s) 974
EcoRI GAATTC 1 cut(s) 137
EcoRII CCWGG 1 cut(s) 1512
EcoT14I CCWWGG 2 cut(s) 574, 625
EcoT38I GRGCYC 1 cut(s) 1550
ErhI CCWWGG 2 cut(s) 574, 625
Esp3I CGTCTC 1 cut(s) 1422
FalI AAGNNNNNCTT 4 cut(s) 359, 391, 553, 585
FaqI GGGAC 2 cut(s) 152, 1091
FauI CCCGC 1 cut(s) 1419
FauNDI CATATG 1 cut(s) 337
FbaI TGATCA 1 cut(s) 675
FblI GTMKAC 1 cut(s) 1089
Fnu4HI GCNGC 9 cut(s) 24, 132, 194, 240, 405, 606, 720, 825, 1398
FokI GGATG 4 cut(s) 264, 1203, 1275, 1307
FriOI GRGCYC 1 cut(s) 1550
Fsp4HI GCNGC 9 cut(s) 24, 132, 194, 240, 405, 606, 720, 825, 1398
FspBI CTAG 2 cut(s) 774, 1031
GlaI GCGC 1 cut(s) 1226
GluI GCNGC 9 cut(s) 24, 132, 194, 240, 405, 606, 720, 825, 1398
GsuI CTGGAG 2 cut(s) 986, 1534
HaeII RGCGCY 1 cut(s) 1228
HaeIII GGCC 3 cut(s) 837, 1400, 1537
HapII CCGG 5 cut(s) 1220, 1292, 1308, 1401, 1416
HgaI GACGC 1 cut(s) 154
HhaI GCGC 1 cut(s) 1227
Hin1I GRCGYC 1 cut(s) 165
Hin6I GCGC 1 cut(s) 1225
HinP1I GCGC 1 cut(s) 1225
HincII GTYRAC 2 cut(s) 1090, 1492
HindII GTYRAC 2 cut(s) 1090, 1492
HpaI GTTAAC 1 cut(s) 1492
HpaII CCGG 5 cut(s) 1220, 1292, 1308, 1401, 1416
HphI GGTGA 7 cut(s) 47, 80, 116, 230, 442, 548, 1148
Hpy166II GTNNAC 6 cut(s) 268, 702, 938, 1090, 1186, 1492
Hpy188I TCNGA 7 cut(s) 306, 634, 766, 793, 984, 1351, 1526
Hpy188III TCNNGA 7 cut(s) 320, 455, 668, 1265, 1273, 1292, 1551
Hpy8I GTNNAC 6 cut(s) 268, 702, 938, 1090, 1186, 1492
Hpy99I CGWCG 1 cut(s) 1436
HpyAV CCTTC 5 cut(s) 18, 180, 564, 576, 1004
HpyCH4III ACNGT 2 cut(s) 1082, 1387
HpyCH4IV ACGT 1 cut(s) 1488
HpyF10VI GCNNNNNNNGC 3 cut(s) 602, 976, 1406
HpyF3I CTNAG 2 cut(s) 89, 1206
HpySE526I ACGT 1 cut(s) 1488
Hsp92I GRCGYC 1 cut(s) 165
HspAI GCGC 1 cut(s) 1225
Kpn2I TCCGGA 1 cut(s) 1291
Ksp22I TGATCA 1 cut(s) 675
KspAI GTTAAC 1 cut(s) 1492
LguI GCTCTTC 1 cut(s) 819
LmnI GCTCC 4 cut(s) 550, 967, 1232, 1553
Lsp1109I GCAGC 7 cut(s) 143, 180, 226, 391, 617, 731, 836
LweI GCATC 3 cut(s) 242, 1036, 1297
MaeI CTAG 2 cut(s) 774, 1031
MaeII ACGT 1 cut(s) 1488
MaeIII GTNAC 6 cut(s) 357, 536, 589, 610, 745, 1387
MflI RGATCY 2 cut(s) 4, 451
MhlI GDGCHC 4 cut(s) 940, 1205, 1550, 1621
MlyI GAGTC 5 cut(s) 497, 1095, 1292, 1298, 1548
MnlI CCTC 5 cut(s) 541, 722, 902, 1156, 1412
MroI TCCGGA 1 cut(s) 1291
MseI TTAA 2 cut(s) 1356, 1491
MslI CAYNNNNRTG 1 cut(s) 1293
MspA1I CMGCKG 2 cut(s) 134, 193
MspI CCGG 5 cut(s) 1220, 1292, 1308, 1401, 1416
MspR9I CCNGG 3 cut(s) 1221, 1416, 1514
Mva1269I GAATGC 2 cut(s) 1071, 1601
MvaI CCWGG 1 cut(s) 1514
MvnI CGCG 1 cut(s) 1397
MwoI GCNNNNNNNGC 3 cut(s) 602, 976, 1406
NciI CCSGG 2 cut(s) 1221, 1416
NdeI CATATG 1 cut(s) 337
NlaIV GGNNCC 5 cut(s) 6, 453, 552, 1239, 1549
NmuCI GTSAC 1 cut(s) 536
NspI RCATGY 3 cut(s) 302, 401, 605
PciI ACATGT 1 cut(s) 298
PciSI GCTCTTC 1 cut(s) 819
PcsI WCGNNNNNNNCGW 1 cut(s) 741
PctI GAATGC 2 cut(s) 1071, 1601
PfeI GAWTC 7 cut(s) 344, 579, 761, 862, 913, 1113, 1529
PkrI GCNGC 9 cut(s) 25, 133, 195, 241, 406, 607, 721, 826, 1399
PleI GAGTC 5 cut(s) 496, 1094, 1291, 1298, 1548
PpsI GAGTC 5 cut(s) 496, 1094, 1291, 1298, 1548
PscI ACATGT 1 cut(s) 298
PsiI TTATAA 1 cut(s) 351
Psp1406I AACGTT 1 cut(s) 1488
Psp6I CCWGG 1 cut(s) 1512
PspGI CCWGG 1 cut(s) 1512
PspN4I GGNNCC 5 cut(s) 6, 453, 552, 1239, 1549
PspPI GGNCC 2 cut(s) 1535, 1571
PstNI CAGNNNCTG 1 cut(s) 1325
PsuI RGATCY 2 cut(s) 4, 451
PvuII CAGCTG 1 cut(s) 134
RsaI GTAC 2 cut(s) 778, 959
RsaNI GTAC 2 cut(s) 777, 958
RseI CAYNNNNRTG 1 cut(s) 1293
SalI GTCGAC 1 cut(s) 1088
SapI GCTCTTC 1 cut(s) 819
SaqAI TTAA 2 cut(s) 1356, 1491
SatI GCNGC 9 cut(s) 24, 132, 194, 240, 405, 606, 720, 825, 1398
Sau96I GGNCC 2 cut(s) 1535, 1571
ScaI AGTACT 1 cut(s) 778
SchI GAGTC 5 cut(s) 497, 1095, 1292, 1298, 1548
ScrFI CCNGG 3 cut(s) 1221, 1416, 1514
SduI GDGCHC 4 cut(s) 940, 1205, 1550, 1621
SfaNI GCATC 3 cut(s) 242, 1036, 1297
SinI GGWCC 1 cut(s) 1571
SmiMI CAYNNNNRTG 1 cut(s) 1293
SmlI CTYRAG 1 cut(s) 1507
SmoI CTYRAG 1 cut(s) 1507
SsiI CCGC 6 cut(s) 23, 191, 364, 449, 1397, 1412
SspMI CTAG 2 cut(s) 774, 1031
StyD4I CCNGG 3 cut(s) 1219, 1414, 1512
StyI CCWWGG 2 cut(s) 574, 625
TaaI ACNGT 2 cut(s) 1082, 1387
TaiI ACGT 1 cut(s) 1491
TaqI TCGA 4 cut(s) 77, 843, 1089, 1281
TatI WGTACW 2 cut(s) 776, 957
TauI GCSGC 2 cut(s) 26, 1400
TfiI GAWTC 7 cut(s) 344, 579, 761, 862, 913, 1113, 1529
Tru1I TTAA 2 cut(s) 1356, 1491
Tru9I TTAA 2 cut(s) 1356, 1491
TscAI CASTG 1 cut(s) 1210
TseFI GTSAC 1 cut(s) 536
TseI GCWGC 7 cut(s) 131, 193, 239, 404, 605, 719, 824
Tsp45I GTSAC 1 cut(s) 536
TspDTI ATGAA 6 cut(s) 705, 806, 866, 908, 1068, 1094
TspGWI ACGGA 2 cut(s) 1449, 1607
TspRI CASTG 1 cut(s) 1210
VneI GTGCAC 1 cut(s) 936
VpaK11BI GGWCC 1 cut(s) 1571
XapI RAATTY 3 cut(s) 137, 1277, 1462
XceI RCATGY 3 cut(s) 302, 401, 605
XcmI CCANNNNNNNNNTGG 1 cut(s) 581
XmiI GTMKAC 1 cut(s) 1089
XspI CTAG 2 cut(s) 774, 1031
ZrmI AGTACT 1 cut(s) 778
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.