RLG00000032997

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000319
Physical Location & Seq
Forward (+)
21906510 .. 21916885
10376 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032997

Sequence Viewer

Length: 1701 bp
ATGGATCCTTCTATGTGCTATTTCTTTCGATTGAAAGAGAGAGAGTGCCGGATGGATCCTTTTATGTATAGGGCGGCAACTTGTGGTGACGTTGGTTTCTTGCAAAGAATTAGAGATGGTGATGTATCAACTGATCTTCTCAGTCAAAGAACCCCAAAAGGCAACAACATTCTTCACCTTGCGGCTGAATTCAAGCATATCAATTTCTTCAAAGGCGTCTCTTCCTTTGAGAAAGGCTCTCCGCTGCTTTGGAACATCAACAAGATGGGTGATACCCCCTTGCACATTGCTGCAAGAGTAGGATGCGTTGAATTGGTGGACTTCCTTATTGATCGTGCAAAAATGCTACATGTTCAGAGAGTTGGCGATCAGGAAAGGGGAACAACATATGCTGAATCTTATAAAAAGTTACTGCGGAATACCAACTTGGAAAAGCATACGGCATTGCATGTTGCTGCCCGATATGGTCATCATCAAGTGGTGATTATGTTGATAAAAGCGGATCCTGAATTGTGTTGTTCTACTAATAGCAAAAAGGAGTCGCCATTGTTCTTGGCGATCTGCAATGGTTTTTCTAACATTGCTGATGACATTTTGGAGGAGCCTTCAATAAGACCTTCTTTCCGAGGAATCAATGGTGTTACAGCCTTACATGCAGCCGTAACTCATACATACCAAGGCTCTGAAGAGATTGTGAAGATCATGGTGTTCAAATATCCTGATATGATCAAAAAAGCTGATGAACTTGGGTGGACACCCTTACACTACGCAGCATTTAGAGGGAACGATAAAGCCGTTACATGGTTGATGGAATCAGACAATTCTAGTGCTTCCTATATCTCGGACAAATGTGGAATGACAGCTCTTCATGTCACAGCATATAAAGGCCACATCGAAGTAATGAAGAAATTGATTCAATATCAGCCTGATACTTGTGAGTGCCTCAATGCCAAAGACCAAACGATTCTTCATGTCGCAGTTTTAGGTGCACAAAGTGATGTTGTGAAGTACTTACTGGAGCTACCCGAGCTTCCGAGACTTATAGATCAAGCAGATAAAGAAGGATATACCCCTTTGCATCTAGCTGTCCTGGGTCAAAAGCATGAAATTACAAGAATGCTGATACGGGACTGTGGAGTCGACAATACTTCTCTTCATAAGGGATTCTCACTTGTTTTTGACAATTTTCTTGGTGAAGATACCAAAATACAGGCAGCTTCAGCTCTGTGCAACCGGAAAAGGGAAGATCCAAACTTGTCACCCAATAACAAAGCCGAACAAGATGGAGAAGAAGGAATCTCAGTCAGAGTGGGAGAAGAGGGAAGCTCGGTCATACTGGGAAAAGGAAGCTCGGTCATACTGGGACGGTACAAACTGGTTTTGGAGGAGAATATGGCTAACAAAGTGAACGAGCAGGAAGATGGTGCTGCTAGTTTTTGGGTCCGCGGATCGAGCGATGGGGTTTCAGTTTCAGATCCGGTGGCGGCAGGGAGAAAGGGGGCTGTTTTAGGGGTTTTTAATCCTGATCCGGTATTCGGAGGAGTGGCCGCGGATCTGATGTGGTCCATTGACGGCGATGCCGGCTCTTTGTTCGGGGATCAGAAGGCTAGTGGCAAAGATGGTTGGGTTGGGTTTGAGTTAATGGTGGATCTGGACCCGTCTCTGGGTTTGGATTATGTTATTGGCTTGGCTCTGATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

567

Amino Acids

62.35

Weight (kDa)

5.69

Isoelectric Point (pI)

29.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 25 - 112 9.7e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 135 - 200 4.1e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 212 - 272 8e-09 Ankyrin repeats (3 copies)
Ank_4 PF13637 254 - 305 2.2e-08 Ankyrin repeats (many copies)
Ank_2 PF12796 280 - 340 4.3e-10 Ankyrin repeats (3 copies)
Ank_4 PF13637 289 - 339 2.7e-06 Ankyrin repeats (many copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000319)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18590 FvH4_1g18590 FvH4_3g16140 FvH4_3g16141 FvH4_3g16160
malus_domestica MD02G1193600.v1.1 MD04G1020900.v1.1 MD04G1021000.v1.1 MD05G1212100.v1.1 MD05G1212300.v1.1 MD05G1213100.v1.1 MD05G1213400.v1.1 MD10G1197300.v1.1
prunus_persica Prupe.4G144500_v2.0.a1 Prupe.4G144600_v2.0.a1 Prupe.4G144800_v2.0.a1 Prupe.4G144900_v2.0.a1 Prupe.4G145100_v2.0.a1 Prupe.4G145300_v2.0.a1
pyrus_communis pycom02g15730 pycom02g15740 pycom05g19670 pycom05g19680 pycom10g17020 pycom11g27250
rosa_chinensis RchiOBHm_Chr2g0109301 RchiOBHm_Chr2g0109321 RchiOBHm_Chr2g0109341 RchiOBHm_Chr2g0109381 RchiOBHm_Chr3g0482301 RchiOBHm_Chr5g0027111 RchiOBHm_Chr5g0027121 RchiOBHm_Chr5g0027141 RchiOBHm_Chr5g0027181 RchiOBHm_Chr5g0027241
rosa_laevigata RLG00000017731 RLG00000017732 RLG00000032990 RLG00000032992 RLG00000032993 RLG00000032995 RLG00000032997 RLG00000033002
rosa_multiflora Rmu_sc0000135.1_g000002 Rmu_sc0000332.1_g000010 Rmu_sc0000882.1_g000028 Rmu_sc0000882.1_g000032 Rmu_sc0000882.1_g000033 Rmu_sc0000882.1_g000039 Rmu_sc0000882.1_g000043 Rmu_sc0000882.1_g000046 Rmu_sc0006065.1_g000003 Rmu_sc0006065.1_g000012 Rmu_sc0006065.1_g000018 Rmu_sc0006065.1_g000019 Rmu_sc0006065.1_g000022 Rmu_sc0007497.1_g000002 Rmu_sc0013610.1_g000011 Rmu_sc0015338.1_g000006 Rmu_ssc0000357.1_g000035
rosa_roxburghii Rroxscaffold_1G00052250 Rroxscaffold_1G00052280 Rroxscaffold_1G00052290 Rroxscaffold_1G00052310 Rroxscaffold_1G00052330 Rroxscaffold_1G00052360 Rroxscaffold_1G00052380 Rroxscaffold_1G00052390 Rroxscaffold_2G00134310 Rroxscaffold_2G00134330
rosa_rugosa Rorug02G0159400 Rorug05G0097300 Rorug05G0097500 Rorug05G0097600 Rorug05G0097700 Rorug05G0097700 Rorug05G0097700 Rorug05G0122900
rosa_samantha Rh2AG210900 Rh2AG211200 Rh2AG211500 Rh2BG221200 Rh2BG221800 Rh2CG213100 Rh2CG213200 Rh2CG213600 Rh3CG277900 Rh3CG278000 Rh3CG278600 Rh3DG274600 Rh5BG188600 Rh5BG188700 Rh5BG188900 Rh5BG189100 Rh5BG189200 Rh5BG189400 Rh5CG208400 Rh5CG208500 Rh5CG208700 Rh5CG209000 Rh5CG209100 Rh5CG209400 Rh5CG209700 Rh5CG209800 Rh5CG209900 Rh5CG210000 Rh5DG190500 Rh5DG190700 Rh5DG191200 Rh5DG191500
rosa_wichuraiana Rw3G022160 Rw5G017410 Rw5G017420 Rw5G017450 Rw5G017460 Rw5G017470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 402
AasI GACNNNNNNGTC 1 cut(s) 1136
AccI GTMKAC 1 cut(s) 1140
AccII CGCG 2 cut(s) 1446, 1550
AcoI YGGCCR 1 cut(s) 1545
AcsI RAATTY 1 cut(s) 188
AcuI CTGAAG 2 cut(s) 705, 1203
AcyI GRCGYC 1 cut(s) 216
AdeI CACNNNGTG 1 cut(s) 995
AfaI GTAC 2 cut(s) 1010, 1370
AfiI CCNNNNNNNGG 5 cut(s) 801, 1240, 1535, 1663, 1664
AflIII ACRYGT 1 cut(s) 349
AgsI TTSAA 7 cut(s) 34, 193, 211, 311, 609, 712, 917
AjnI CCWGG 1 cut(s) 1089
AjuI GAANNNNNNNTTGG 4 cut(s) 410, 442, 951, 983
AluBI AGCT 9 cut(s) 737, 863, 1021, 1030, 1085, 1217, 1223, 1326, 1350
AluI AGCT 9 cut(s) 737, 863, 1021, 1030, 1085, 1217, 1223, 1326, 1350
Alw21I GWGCWC 1 cut(s) 991
Alw26I GTCTC 3 cut(s) 223, 1030, 1665
Alw44I GTGCAC 1 cut(s) 987
Ama87I CYCGRG 1 cut(s) 1025
AoxI GGCC 2 cut(s) 886, 1545
ApaLI GTGCAC 1 cut(s) 987
ApeKI GCWGC 7 cut(s) 244, 290, 455, 656, 770, 1214, 1427
ApoI RAATTY 1 cut(s) 188
AspS9I GGNCC 3 cut(s) 1441, 1563, 1654
AsuHPI GGTGA 7 cut(s) 98, 131, 167, 281, 493, 1205, 1251
AvaI CYCGRG 1 cut(s) 1025
AvaII GGWCC 3 cut(s) 1441, 1563, 1654
BaeGI GKGCMC 1 cut(s) 991
BamHI GGATCC 3 cut(s) 4, 55, 502
Bbv12I GWGCWC 1 cut(s) 991
BbvI GCAGC 7 cut(s) 231, 277, 442, 668, 782, 1226, 1414
BccI CCATC 8 cut(s) 46, 110, 259, 802, 1277, 1415, 1451, 1613
BceAI ACGGC 4 cut(s) 456, 644, 779, 1588
BciT130I CCWGG 1 cut(s) 1091
BclI TGATCA 1 cut(s) 726
BcoDI GTCTC 3 cut(s) 223, 1030, 1665
BfaI CTAG 5 cut(s) 825, 1082, 1431, 1608, 1699
BmcAI AGTACT 1 cut(s) 1010
Bme1390I CCNGG 1 cut(s) 1091
Bme18I GGWCC 3 cut(s) 1441, 1563, 1654
BmeT110I CYCGRG 1 cut(s) 1025
BmgT120I GGNCC 3 cut(s) 1441, 1563, 1654
BmiI GGNNCC 6 cut(s) 6, 57, 504, 603, 1442, 1656
BmrFI CCNGG 1 cut(s) 1091
BmrI ACTGGG 2 cut(s) 1346, 1370
BmsI GCATC 3 cut(s) 293, 1087, 1567
BmuI ACTGGG 2 cut(s) 1346, 1370
BplI GAGNNNNNCTC 4 cut(s) 221, 253, 1310, 1342
BpmI CTGGAG 1 cut(s) 1037
BsaHI GRCGYC 1 cut(s) 216
BsaJI CCNNGG 5 cut(s) 625, 676, 1090, 1444, 1548
BsaWI WCCGGW 3 cut(s) 1233, 1477, 1528
Bsc4I CCNNNNNNNGG 5 cut(s) 801, 1240, 1535, 1663, 1664
Bse118I RCCGGY 1 cut(s) 1580
Bse1I ACTGG 4 cut(s) 1020, 1341, 1365, 1380
Bse3DI GCAATG 4 cut(s) 285, 443, 571, 579
BseBI CCWGG 1 cut(s) 1091
BseDI CCNNGG 5 cut(s) 625, 676, 1090, 1444, 1548
BseGI GGATG 2 cut(s) 57, 308
BseLI CCNNNNNNNGG 5 cut(s) 801, 1240, 1535, 1663, 1664
BseMI GCAATG 4 cut(s) 285, 443, 571, 579
BseMII CTCAG 2 cut(s) 154, 1314
BseNI ACTGG 4 cut(s) 1020, 1341, 1365, 1380
BseRI GAGGAG 3 cut(s) 614, 1400, 1554
BseSI GKGCMC 1 cut(s) 991
BseXI GCAGC 7 cut(s) 231, 277, 442, 668, 782, 1226, 1414
Bsh1236I CGCG 2 cut(s) 1446, 1550
BshFI GGCC 2 cut(s) 888, 1547
BsiHKAI GWGCWC 1 cut(s) 991
BsiHKCI CYCGRG 1 cut(s) 1025
BsiSI CCGG 5 cut(s) 49, 1234, 1478, 1529, 1581
BslFI GGGAC 2 cut(s) 1142, 1377
BslI CCNNNNNNNGG 5 cut(s) 801, 1240, 1535, 1663, 1664
BsmAI GTCTC 3 cut(s) 223, 1030, 1665
BsmBI CGTCTC 2 cut(s) 223, 1665
BsmFI GGGAC 2 cut(s) 1142, 1377
BsmI GAATGC 1 cut(s) 1122
BsnI GGCC 2 cut(s) 888, 1547
BsoBI CYCGRG 1 cut(s) 1025
Bsp1286I GDGCHC 1 cut(s) 991
BspANI GGCC 2 cut(s) 888, 1547
BspCNI CTCAG 2 cut(s) 153, 1313
BspFNI CGCG 2 cut(s) 1446, 1550
BspLI GGNNCC 6 cut(s) 6, 57, 504, 603, 1442, 1656
BspQI GCTCTTC 1 cut(s) 870
BsrDI GCAATG 4 cut(s) 285, 443, 571, 579
BsrFI RCCGGY 1 cut(s) 1580
BsrI ACTGG 4 cut(s) 1020, 1341, 1365, 1380
BssAI RCCGGY 1 cut(s) 1580
BssECI CCNNGG 5 cut(s) 625, 676, 1090, 1444, 1548
BssNI GRCGYC 1 cut(s) 216
BssT1I CCWWGG 1 cut(s) 676
Bst2UI CCWGG 1 cut(s) 1091
Bst4CI ACNGT 2 cut(s) 1133, 1368
Bst6I CTCTTC 5 cut(s) 226, 681, 870, 1158, 1311
BstACI GRCGYC 1 cut(s) 216
BstC8I GCNNGC 1 cut(s) 1582
BstDEI CTNAG 2 cut(s) 140, 1300
BstDSI CCRYGG 2 cut(s) 1444, 1548
BstF5I GGATG 2 cut(s) 57, 308
BstFNI CGCG 2 cut(s) 1446, 1550
BstMAI GTCTC 3 cut(s) 223, 1030, 1665
BstMWI GCNNNNNNNGC 5 cut(s) 653, 1027, 1220, 1452, 1581
BstNI CCWGG 1 cut(s) 1091
BstNSI RCATGY 3 cut(s) 353, 452, 656
BstSCI CCNGG 1 cut(s) 1089
BstSLI GKGCMC 1 cut(s) 991
BstUI CGCG 2 cut(s) 1446, 1550
BstV1I GCAGC 7 cut(s) 231, 277, 442, 668, 782, 1226, 1414
BstX2I RGATCY 7 cut(s) 4, 55, 502, 1246, 1474, 1552, 1648
BstYI RGATCY 7 cut(s) 4, 55, 502, 1246, 1474, 1552, 1648
BsuRI GGCC 2 cut(s) 888, 1547
BtgI CCRYGG 2 cut(s) 1444, 1548
BtgZI GCGATG 2 cut(s) 1470, 1590
BtsCI GGATG 2 cut(s) 57, 308
Cac8I GCNNGC 1 cut(s) 1582
Cfr10I RCCGGY 1 cut(s) 1580
Cfr13I GGNCC 3 cut(s) 1441, 1563, 1654
Cfr42I CCGCGG 2 cut(s) 1447, 1551
CseI GACGC 1 cut(s) 205
Csp6I GTAC 2 cut(s) 1009, 1369
CviAII CATG 8 cut(s) 350, 449, 653, 703, 801, 869, 971, 1103
CviQI GTAC 2 cut(s) 1009, 1369
DdeI CTNAG 2 cut(s) 140, 1300
DraIII CACNNNGTG 1 cut(s) 995
DrdI GACNNNNNNGTC 1 cut(s) 1136
DseDI GACNNNNNNGTC 1 cut(s) 1136
EaeI YGGCCR 1 cut(s) 1545
Eam1104I CTCTTC 5 cut(s) 226, 681, 870, 1158, 1311
EarI CTCTTC 5 cut(s) 226, 681, 870, 1158, 1311
Eco130I CCWWGG 1 cut(s) 676
Eco47I GGWCC 3 cut(s) 1441, 1563, 1654
Eco57I CTGAAG 2 cut(s) 705, 1203
Eco88I CYCGRG 1 cut(s) 1025
EcoRI GAATTC 1 cut(s) 188
EcoRII CCWGG 1 cut(s) 1089
EcoT14I CCWWGG 1 cut(s) 676
ErhI CCWWGG 1 cut(s) 676
Esp3I CGTCTC 2 cut(s) 223, 1665
FaeI CATG 8 cut(s) 353, 452, 656, 706, 804, 872, 974, 1106
FalI AAGNNNNNCTT 2 cut(s) 604, 636
FaqI GGGAC 2 cut(s) 1142, 1377
FatI CATG 8 cut(s) 349, 448, 652, 702, 800, 868, 970, 1102
FauNDI CATATG 1 cut(s) 388
FbaI TGATCA 1 cut(s) 726
FblI GTMKAC 1 cut(s) 1140
FokI GGATG 2 cut(s) 64, 315
FspBI CTAG 5 cut(s) 825, 1082, 1431, 1608, 1699
GsuI CTGGAG 1 cut(s) 1037
HaeIII GGCC 2 cut(s) 888, 1547
HapII CCGG 5 cut(s) 49, 1234, 1478, 1529, 1581
HgaI GACGC 1 cut(s) 205
Hin1I GRCGYC 1 cut(s) 216
Hin1II CATG 8 cut(s) 353, 452, 656, 706, 804, 872, 974, 1106
HincII GTYRAC 1 cut(s) 1141
HindII GTYRAC 1 cut(s) 1141
HinfI GANTC 9 cut(s) 395, 539, 630, 812, 913, 964, 1137, 1164, 1296
HpaII CCGG 5 cut(s) 49, 1234, 1478, 1529, 1581
HphI GGTGA 7 cut(s) 98, 131, 167, 281, 493, 1205, 1251
Hpy166II GTNNAC 5 cut(s) 319, 753, 989, 1141, 1408
Hpy188III TCNNGA 5 cut(s) 371, 506, 719, 1523, 1652
Hpy8I GTNNAC 5 cut(s) 319, 753, 989, 1141, 1408
HpyAV CCTTC 6 cut(s) 18, 615, 627, 1055, 1286, 1597
HpyCH4III ACNGT 2 cut(s) 1133, 1368
HpyCH4IV ACGT 1 cut(s) 90
HpyF10VI GCNNNNNNNGC 5 cut(s) 653, 1027, 1220, 1452, 1581
HpyF3I CTNAG 2 cut(s) 140, 1300
HpySE526I ACGT 1 cut(s) 90
Hsp92I GRCGYC 1 cut(s) 216
Hsp92II CATG 8 cut(s) 353, 452, 656, 706, 804, 872, 974, 1106
KroI GCCGGC 1 cut(s) 1580
KroNI GCCGGC 1 cut(s) 1582
Ksp22I TGATCA 1 cut(s) 726
KspI CCGCGG 2 cut(s) 1447, 1551
LguI GCTCTTC 1 cut(s) 870
LmnI GCTCC 2 cut(s) 601, 1018
Lsp1109I GCAGC 7 cut(s) 231, 277, 442, 668, 782, 1226, 1414
LweI GCATC 3 cut(s) 293, 1087, 1567
MaeI CTAG 5 cut(s) 825, 1082, 1431, 1608, 1699
MaeII ACGT 1 cut(s) 90
MaeIII GTNAC 7 cut(s) 86, 408, 640, 661, 796, 871, 1257
MflI RGATCY 7 cut(s) 4, 55, 502, 1246, 1474, 1552, 1648
MhlI GDGCHC 1 cut(s) 991
MluCI AATT 9 cut(s) 108, 188, 202, 311, 509, 820, 908, 1107, 1183
MlyI GAGTC 2 cut(s) 548, 1146
MnlI CCTC 7 cut(s) 592, 620, 773, 953, 1312, 1378, 1532
MroNI GCCGGC 1 cut(s) 1580
MseI TTAA 2 cut(s) 1518, 1640
MspA1I CMGCKG 3 cut(s) 244, 1446, 1550
MspI CCGG 5 cut(s) 49, 1234, 1478, 1529, 1581
MspR9I CCNGG 1 cut(s) 1091
Mva1269I GAATGC 1 cut(s) 1122
MvaI CCWGG 1 cut(s) 1091
MvnI CGCG 2 cut(s) 1446, 1550
MwoI GCNNNNNNNGC 5 cut(s) 653, 1027, 1220, 1452, 1581
NaeI GCCGGC 1 cut(s) 1582
NdeI CATATG 1 cut(s) 388
NgoMIV GCCGGC 1 cut(s) 1580
NlaIII CATG 8 cut(s) 353, 452, 656, 706, 804, 872, 974, 1106
NlaIV GGNNCC 6 cut(s) 6, 57, 504, 603, 1442, 1656
NmuCI GTSAC 3 cut(s) 86, 871, 1257
NspI RCATGY 3 cut(s) 353, 452, 656
PciI ACATGT 1 cut(s) 349
PciSI GCTCTTC 1 cut(s) 870
PcsI WCGNNNNNNNCGW 1 cut(s) 792
PctI GAATGC 1 cut(s) 1122
PdiI GCCGGC 1 cut(s) 1582
PfeI GAWTC 7 cut(s) 395, 630, 812, 913, 964, 1164, 1296
PleI GAGTC 2 cut(s) 547, 1145
PpsI GAGTC 2 cut(s) 547, 1145
PscI ACATGT 1 cut(s) 349
PsiI TTATAA 1 cut(s) 402
Psp6I CCWGG 1 cut(s) 1089
PspGI CCWGG 1 cut(s) 1089
PspN4I GGNNCC 6 cut(s) 6, 57, 504, 603, 1442, 1656
PspPI GGNCC 3 cut(s) 1441, 1563, 1654
PsuI RGATCY 7 cut(s) 4, 55, 502, 1246, 1474, 1552, 1648
RsaI GTAC 2 cut(s) 1010, 1370
RsaNI GTAC 2 cut(s) 1009, 1369
SacII CCGCGG 2 cut(s) 1447, 1551
SalI GTCGAC 1 cut(s) 1139
SapI GCTCTTC 1 cut(s) 870
SaqAI TTAA 2 cut(s) 1518, 1640
Sau96I GGNCC 3 cut(s) 1441, 1563, 1654
ScaI AGTACT 1 cut(s) 1010
SchI GAGTC 2 cut(s) 548, 1146
ScrFI CCNGG 1 cut(s) 1091
SduI GDGCHC 1 cut(s) 991
SfaNI GCATC 3 cut(s) 293, 1087, 1567
Sfr303I CCGCGG 2 cut(s) 1447, 1551
SgrBI CCGCGG 2 cut(s) 1447, 1551
SinI GGWCC 3 cut(s) 1441, 1563, 1654
Sse9I AATT 9 cut(s) 108, 188, 202, 311, 509, 820, 908, 1107, 1183
SspMI CTAG 5 cut(s) 825, 1082, 1431, 1608, 1699
StyD4I CCNGG 1 cut(s) 1089
StyI CCWWGG 1 cut(s) 676
TaaI ACNGT 2 cut(s) 1133, 1368
TaiI ACGT 1 cut(s) 93
TaqI TCGA 4 cut(s) 28, 894, 1140, 1451
TaqII GACCGA 2 cut(s) 1318, 1342
TasI AATT 9 cut(s) 108, 188, 202, 311, 509, 820, 908, 1107, 1183
TatI WGTACW 1 cut(s) 1008
TauI GCSGC 4 cut(s) 77, 185, 1487, 1550
TfiI GAWTC 7 cut(s) 395, 630, 812, 913, 964, 1164, 1296
Tru1I TTAA 2 cut(s) 1518, 1640
Tru9I TTAA 2 cut(s) 1518, 1640
TseFI GTSAC 3 cut(s) 86, 871, 1257
TseI GCWGC 7 cut(s) 244, 290, 455, 656, 770, 1214, 1427
Tsp45I GTSAC 3 cut(s) 86, 871, 1257
TspDTI ATGAA 6 cut(s) 756, 857, 917, 959, 1119, 1145
VneI GTGCAC 1 cut(s) 987
VpaK11BI GGWCC 3 cut(s) 1441, 1563, 1654
XapI RAATTY 1 cut(s) 188
XceI RCATGY 3 cut(s) 353, 452, 656
XmiI GTMKAC 1 cut(s) 1140
XspI CTAG 5 cut(s) 825, 1082, 1431, 1608, 1699
ZrmI AGTACT 1 cut(s) 1010
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.