Rh3DG274600

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0000319
Physical Location & Seq
Forward (+)
27838636 .. 27843616
4981 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG274600.1

Sequence Viewer

Length: 1371 bp
ATGGATCCTTCTCTCTATAGAGCAGCAAGATCTGGTGATATAAATTTCCTGAATATTGAAGATGCATGTATTGATCCTCTCCATCAAAGAACGCCTAAAGAGAACAATCTTCTTCACATCGCTGCGGAATTCAAGCAAATAGATTTCTTCAAACATGTCAAACTCAACTATGAATCTCCGCGGTTTTGGGTCACCAACAAGTCCGGCGACACTCCATTGCACGTCGCAGCCAGAGTAGGCTGTCATGCAGTTGTTGAGTTTGTCATTGACCACACAAAATCATTCCCCCTCGAAGGAGCTGATGATCAGGAAAGCGTACCAGCTGATGCTGAAACTTATAAACAACTGCTCAGAATGCCTAATTTTCAAAATGACACAGCTTTGCATATTGCTGTGCGATATGGTCACGATAAGGTAGCGACTCTACTAATCAAAGCTGACCCTGAACTCTGTTATTACACAAATAGTGCGAACGAGTCGCCGTTGTTCCTTGCTATTAGAAAGAGCTCTCCGAGCATCGCTAGTTACATTTTAGAGGAGTCTTCTTCTCATGCGTCTCCTTACCTTCAAGGGACTAATGGTTTAACGGCTTTGCACGCGGCAGTAACTCACCAAGACCTTGCAAGCAAAGGCATTGTGAAGACTATGGTCTCCACGAATCCTGAGATAATAAGAGAGCCTGATGCACTTGGGTGGACTCCTTTACATTATGCAGCACTGATAGGGAACCTAGAAGCAACTCGAGTGCTACTTCAGTCCAATAGTTCTGTTTCTTACATAATGGATAATTCCGGGTCGTCACCTCTCCATATTGCGGCTTATGCAGGCCACACTAATGTAATGGAAGAGCTTATTCGATGTCGGCCTGATACCTGTGATCTGGTCAATGAAAATGGTCAATCAGCTCTACATGCTGCAGTTATAGGTTCACGAATTAATGTTGTCAAATACATATTGAAGACTCCTGGGCTTTCAGGACTTACAAATGAAGCAGATAAAGATGGAAACACTCCATTACATCTAGCTGCTATTTGCCGCAACCGAGACATTATAAGAATTTTGGCACAAGACCGCAGAGTAGACATTCTCTCTTTCAATAAGGAATCCTCAACCGCCCTCGACATTTTTCTGGGCAACAATATTGGAGAACAGGAAATTATTGGCAATAGTAGAACGATTTTGCACCACCTGAAGTGTTCTGTTGGTGTGCCATTTCTCCAACAACAAATCAGCCATAATTTGAAGAAAATGACAACTCGAGAGAGGGATACGTCTGACACACTGGCCATTATTGGCATCAAGAGAGAACAGCCGCAGGCTAATTTGGATCAAGCCTTGAAAAGGTATGATAATAAACTATTGGCATGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

456

Amino Acids

50.54

Weight (kDa)

6.25

Isoelectric Point (pI)

43.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 5 - 91 5.1e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 38 - 147 1.1e-11 Ankyrin repeats (3 copies)
Ank_2 PF12796 111 - 180 1.9e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 186 - 256 1.4e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 208 - 286 1.4e-12 Ankyrin repeats (3 copies)
Ank_2 PF12796 269 - 362 9.5e-17 Ankyrin repeats (3 copies)
Ank_4 PF13637 303 - 354 7.4e-06 Ankyrin repeats (many copies)
Ank_5 PF13857 328 - 375 1.5e-07 Ankyrin repeats (many copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000319)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18590 FvH4_1g18590 FvH4_3g16140 FvH4_3g16141 FvH4_3g16160
malus_domestica MD02G1193600.v1.1 MD04G1020900.v1.1 MD04G1021000.v1.1 MD05G1212100.v1.1 MD05G1212300.v1.1 MD05G1213100.v1.1 MD05G1213400.v1.1 MD10G1197300.v1.1
prunus_persica Prupe.4G144500_v2.0.a1 Prupe.4G144600_v2.0.a1 Prupe.4G144800_v2.0.a1 Prupe.4G144900_v2.0.a1 Prupe.4G145100_v2.0.a1 Prupe.4G145300_v2.0.a1
pyrus_communis pycom02g15730 pycom02g15740 pycom05g19670 pycom05g19680 pycom10g17020 pycom11g27250
rosa_chinensis RchiOBHm_Chr2g0109301 RchiOBHm_Chr2g0109321 RchiOBHm_Chr2g0109341 RchiOBHm_Chr2g0109381 RchiOBHm_Chr3g0482301 RchiOBHm_Chr5g0027111 RchiOBHm_Chr5g0027121 RchiOBHm_Chr5g0027141 RchiOBHm_Chr5g0027181 RchiOBHm_Chr5g0027241
rosa_laevigata RLG00000017731 RLG00000017732 RLG00000032990 RLG00000032992 RLG00000032993 RLG00000032995 RLG00000032997 RLG00000033002
rosa_multiflora Rmu_sc0000135.1_g000002 Rmu_sc0000332.1_g000010 Rmu_sc0000882.1_g000028 Rmu_sc0000882.1_g000032 Rmu_sc0000882.1_g000033 Rmu_sc0000882.1_g000039 Rmu_sc0000882.1_g000043 Rmu_sc0000882.1_g000046 Rmu_sc0006065.1_g000003 Rmu_sc0006065.1_g000012 Rmu_sc0006065.1_g000018 Rmu_sc0006065.1_g000019 Rmu_sc0006065.1_g000022 Rmu_sc0007497.1_g000002 Rmu_sc0013610.1_g000011 Rmu_sc0015338.1_g000006 Rmu_ssc0000357.1_g000035
rosa_roxburghii Rroxscaffold_1G00052250 Rroxscaffold_1G00052280 Rroxscaffold_1G00052290 Rroxscaffold_1G00052310 Rroxscaffold_1G00052330 Rroxscaffold_1G00052360 Rroxscaffold_1G00052380 Rroxscaffold_1G00052390 Rroxscaffold_2G00134310 Rroxscaffold_2G00134330
rosa_rugosa Rorug02G0159400 Rorug05G0097300 Rorug05G0097500 Rorug05G0097600 Rorug05G0097700 Rorug05G0097700 Rorug05G0097700 Rorug05G0122900
rosa_samantha Rh2AG210900 Rh2AG211200 Rh2AG211500 Rh2BG221200 Rh2BG221800 Rh2CG213100 Rh2CG213200 Rh2CG213600 Rh3CG277900 Rh3CG278000 Rh3CG278600 Rh3DG274600 Rh5BG188600 Rh5BG188700 Rh5BG188900 Rh5BG189100 Rh5BG189200 Rh5BG189400 Rh5CG208400 Rh5CG208500 Rh5CG208700 Rh5CG209000 Rh5CG209100 Rh5CG209400 Rh5CG209700 Rh5CG209800 Rh5CG209900 Rh5CG210000 Rh5DG190500 Rh5DG190700 Rh5DG191200 Rh5DG191500
rosa_wichuraiana Rw3G022160 Rw5G017410 Rw5G017420 Rw5G017450 Rw5G017460 Rw5G017470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 339, 1052
AccI GTMKAC 1 cut(s) 1080
AccII CGCG 2 cut(s) 181, 599
AciI CCGC 9 cut(s) 125, 179, 181, 599, 815, 1036, 1072, 1113, 1313
AclWI GGATC 3 cut(s) 12, 68, 1335
AcoI YGGCCR 1 cut(s) 1284
AcsI RAATTY 3 cut(s) 43, 128, 1056
AcuI CTGAAG 2 cut(s) 737, 1211
AfaI GTAC 1 cut(s) 318
AfiI CCNNNNNNNGG 3 cut(s) 293, 814, 1341
AflIII ACRYGT 1 cut(s) 154
AgsI TTSAA 9 cut(s) 59, 133, 151, 368, 569, 958, 1096, 1243, 1339
AjiI CACGTC 1 cut(s) 223
AjnI CCWGG 1 cut(s) 964
AleI CACNNNNGTG 1 cut(s) 691
AluBI AGCT 8 cut(s) 299, 323, 380, 437, 507, 850, 905, 1025
AluI AGCT 8 cut(s) 299, 323, 380, 437, 507, 850, 905, 1025
Alw21I GWGCWC 1 cut(s) 509
Alw26I GTCTC 3 cut(s) 561, 655, 1038
AlwI GGATC 3 cut(s) 12, 68, 1335
Ama87I CYCGRG 2 cut(s) 741, 1257
AoxI GGCC 3 cut(s) 826, 863, 1284
ApeKI GCWGC 6 cut(s) 23, 122, 227, 713, 914, 1025
ApoI RAATTY 3 cut(s) 43, 128, 1056
AseI ATTAAT 1 cut(s) 936
AsuC2I CCSGG 1 cut(s) 793
AsuHPI GGTGA 4 cut(s) 47, 184, 602, 792
AvaI CYCGRG 2 cut(s) 741, 1257
BalI TGGCCA 1 cut(s) 1286
BamHI GGATCC 1 cut(s) 4
BanII GRGCYC 1 cut(s) 509
BbsI GAAGAC 3 cut(s) 534, 647, 965
Bbv12I GWGCWC 1 cut(s) 509
BbvI GCAGC 6 cut(s) 35, 109, 239, 725, 901, 1012
BccI CCATC 2 cut(s) 90, 995
BceAI ACGGC 2 cut(s) 466, 603
BciT130I CCWGG 1 cut(s) 966
BciVI GTATCC 1 cut(s) 1261
BclI TGATCA 1 cut(s) 304
BcnI CCSGG 1 cut(s) 793
BcoDI GTCTC 3 cut(s) 561, 655, 1038
BfaI CTAG 3 cut(s) 522, 731, 1022
BfmI CTRYAG 2 cut(s) 16, 915
BfuI GTATCC 1 cut(s) 1261
BglII AGATCT 1 cut(s) 29
Bme1390I CCNGG 2 cut(s) 793, 966
BmeT110I CYCGRG 2 cut(s) 741, 1257
BmgBI CACGTC 1 cut(s) 223
BmiI GGNNCC 2 cut(s) 6, 728
BmrFI CCNGG 2 cut(s) 793, 966
BmsI GCATC 5 cut(s) 52, 316, 525, 673, 1305
BoxI GACNNNNGTC 1 cut(s) 647
BpiI GAAGAC 3 cut(s) 534, 647, 965
BpuMI CCSGG 1 cut(s) 793
BsaI GGTCTC 1 cut(s) 655
BsaJI CCNNGG 2 cut(s) 179, 965
Bsc4I CCNNNNNNNGG 3 cut(s) 293, 814, 1341
Bse1I ACTGG 1 cut(s) 1287
Bse3DI GCAATG 1 cut(s) 215
BseBI CCWGG 1 cut(s) 966
BseDI CCNNGG 2 cut(s) 179, 965
BseLI CCNNNNNNNGG 3 cut(s) 293, 814, 1341
BseMI GCAATG 1 cut(s) 215
BseMII CTCAG 2 cut(s) 364, 654
BseNI ACTGG 1 cut(s) 1287
BseRI GAGGAG 1 cut(s) 551
BseXI GCAGC 6 cut(s) 35, 109, 239, 725, 901, 1012
Bsh1236I CGCG 2 cut(s) 181, 599
BshFI GGCC 3 cut(s) 828, 865, 1286
BsiHKAI GWGCWC 1 cut(s) 509
BsiHKCI CYCGRG 2 cut(s) 741, 1257
BsiSI CCGG 2 cut(s) 204, 792
BslFI GGGAC 1 cut(s) 586
BslI CCNNNNNNNGG 3 cut(s) 293, 814, 1341
BsmAI GTCTC 3 cut(s) 561, 655, 1038
BsmBI CGTCTC 1 cut(s) 561
BsmFI GGGAC 1 cut(s) 586
BsmI GAATGC 1 cut(s) 360
BsnI GGCC 3 cut(s) 828, 865, 1286
Bso31I GGTCTC 1 cut(s) 655
BsoBI CYCGRG 2 cut(s) 741, 1257
Bsp1286I GDGCHC 1 cut(s) 509
Bsp143I GATC 6 cut(s) 4, 29, 73, 304, 877, 1327
BspACI CCGC 9 cut(s) 125, 179, 181, 599, 815, 1036, 1072, 1113, 1313
BspANI GGCC 3 cut(s) 828, 865, 1286
BspCNI CTCAG 2 cut(s) 363, 655
BspFNI CGCG 2 cut(s) 181, 599
BspLI GGNNCC 2 cut(s) 6, 728
BspMAI CTGCAG 1 cut(s) 919
BspPI GGATC 3 cut(s) 12, 68, 1335
BspQI GCTCTTC 1 cut(s) 840
BspTNI GGTCTC 1 cut(s) 655
BsrDI GCAATG 1 cut(s) 215
BsrI ACTGG 1 cut(s) 1287
BssECI CCNNGG 2 cut(s) 179, 965
BssMI GATC 6 cut(s) 4, 29, 73, 304, 877, 1327
Bst2UI CCWGG 1 cut(s) 966
Bst6I CTCTTC 1 cut(s) 840
BstC8I GCNNGC 4 cut(s) 597, 625, 826, 1317
BstDEI CTNAG 2 cut(s) 350, 663
BstDSI CCRYGG 1 cut(s) 179
BstEII GGTNACC 1 cut(s) 190
BstENI CCTNNNNNAGG 1 cut(s) 1339
BstFNI CGCG 2 cut(s) 181, 599
BstKTI GATC 6 cut(s) 7, 32, 76, 307, 880, 1330
BstMAI GTCTC 3 cut(s) 561, 655, 1038
BstMBI GATC 6 cut(s) 4, 29, 73, 304, 877, 1327
BstMWI GCNNNNNNNGC 5 cut(s) 355, 513, 596, 821, 911
BstNI CCWGG 1 cut(s) 966
BstNSI RCATGY 3 cut(s) 69, 158, 914
BstPAI GACNNNNGTC 1 cut(s) 647
BstPI GGTNACC 1 cut(s) 190
BstSCI CCNGG 2 cut(s) 791, 964
BstSFI CTRYAG 2 cut(s) 16, 915
BstUI CGCG 2 cut(s) 181, 599
BstV1I GCAGC 6 cut(s) 35, 109, 239, 725, 901, 1012
BstV2I GAAGAC 3 cut(s) 534, 647, 965
BstX2I RGATCY 2 cut(s) 4, 29
BstYI RGATCY 2 cut(s) 4, 29
BsuI GTATCC 1 cut(s) 1261
BsuRI GGCC 3 cut(s) 828, 865, 1286
BtgI CCRYGG 1 cut(s) 179
BtgZI GCGATG 2 cut(s) 103, 502
BtrI CACGTC 1 cut(s) 223
BtsIMutI CAGTG 2 cut(s) 716, 1280
Cac8I GCNNGC 4 cut(s) 597, 625, 826, 1317
Cfr42I CCGCGG 1 cut(s) 182
CseI GACGC 1 cut(s) 543
Csp6I GTAC 1 cut(s) 317
CviAII CATG 6 cut(s) 66, 155, 245, 551, 911, 1365
CviQI GTAC 1 cut(s) 317
DdeI CTNAG 2 cut(s) 350, 663
DpnI GATC 6 cut(s) 6, 31, 75, 306, 879, 1329
DpnII GATC 6 cut(s) 4, 29, 73, 304, 877, 1327
EaeI YGGCCR 1 cut(s) 1284
Eam1104I CTCTTC 1 cut(s) 840
EarI CTCTTC 1 cut(s) 840
Ecl136II GAGCTC 1 cut(s) 507
Eco24I GRGCYC 1 cut(s) 509
Eco31I GGTCTC 1 cut(s) 655
Eco53kI GAGCTC 1 cut(s) 507
Eco57I CTGAAG 2 cut(s) 737, 1211
Eco88I CYCGRG 2 cut(s) 741, 1257
Eco91I GGTNACC 1 cut(s) 190
EcoICRI GAGCTC 1 cut(s) 507
EcoNI CCTNNNNNAGG 1 cut(s) 1339
EcoO65I GGTNACC 1 cut(s) 190
EcoRI GAATTC 1 cut(s) 128
EcoRII CCWGG 1 cut(s) 964
EcoT22I ATGCAT 1 cut(s) 67
EcoT38I GRGCYC 1 cut(s) 509
Esp3I CGTCTC 1 cut(s) 561
FaeI CATG 6 cut(s) 69, 158, 248, 554, 914, 1368
FaqI GGGAC 1 cut(s) 586
FatI CATG 6 cut(s) 65, 154, 244, 550, 910, 1364
FbaI TGATCA 1 cut(s) 304
FblI GTMKAC 1 cut(s) 1080
FriOI GRGCYC 1 cut(s) 509
FspBI CTAG 3 cut(s) 522, 731, 1022
HaeIII GGCC 3 cut(s) 828, 865, 1286
HapII CCGG 2 cut(s) 204, 792
HgaI GACGC 1 cut(s) 543
Hin1II CATG 6 cut(s) 69, 158, 248, 554, 914, 1368
HinfI GANTC 8 cut(s) 173, 421, 476, 539, 658, 697, 961, 1103
HpaII CCGG 2 cut(s) 204, 792
HphI GGTGA 4 cut(s) 47, 184, 602, 792
Hpy166II GTNNAC 3 cut(s) 696, 929, 1081
Hpy188I TCNGA 3 cut(s) 353, 513, 1276
Hpy188III TCNNGA 8 cut(s) 49, 308, 407, 662, 930, 975, 1259, 1300
Hpy8I GTNNAC 3 cut(s) 696, 929, 1081
Hpy99I CGWCG 1 cut(s) 227
HpyAV CCTTC 3 cut(s) 18, 287, 575
HpyCH4IV ACGT 2 cut(s) 222, 1271
HpyF10VI GCNNNNNNNGC 5 cut(s) 355, 513, 596, 821, 911
HpyF3I CTNAG 2 cut(s) 350, 663
HpySE526I ACGT 2 cut(s) 222, 1271
Hsp92II CATG 6 cut(s) 69, 158, 248, 554, 914, 1368
Ksp22I TGATCA 1 cut(s) 304
KspI CCGCGG 1 cut(s) 182
Kzo9I GATC 6 cut(s) 4, 29, 73, 304, 877, 1327
LguI GCTCTTC 1 cut(s) 840
LmnI GCTCC 1 cut(s) 296
Lsp1109I GCAGC 6 cut(s) 35, 109, 239, 725, 901, 1012
LweI GCATC 5 cut(s) 52, 316, 525, 673, 1305
MaeI CTAG 3 cut(s) 522, 731, 1022
MaeII ACGT 2 cut(s) 222, 1271
MaeIII GTNAC 5 cut(s) 190, 404, 524, 604, 798
MalI GATC 6 cut(s) 6, 31, 75, 306, 879, 1329
MboI GATC 6 cut(s) 4, 29, 73, 304, 877, 1327
MflI RGATCY 2 cut(s) 4, 29
MhlI GDGCHC 1 cut(s) 509
MlsI TGGCCA 1 cut(s) 1286
MluCI AATT 9 cut(s) 43, 128, 361, 787, 933, 1056, 1155, 1237, 1321
MluNI TGGCCA 1 cut(s) 1286
MlyI GAGTC 5 cut(s) 415, 485, 548, 691, 955
MmeI TCCRAC 1 cut(s) 1243
MnlI CCTC 7 cut(s) 87, 299, 529, 813, 1117, 1127, 1257
Mox20I TGGCCA 1 cut(s) 1286
Mph1103I ATGCAT 1 cut(s) 67
MscI TGGCCA 1 cut(s) 1286
MseI TTAA 2 cut(s) 584, 936
MslI CAYNNNNRTG 2 cut(s) 691, 834
Msp20I TGGCCA 1 cut(s) 1286
MspA1I CMGCKG 2 cut(s) 181, 323
MspI CCGG 2 cut(s) 204, 792
MspR9I CCNGG 2 cut(s) 793, 966
Mva1269I GAATGC 1 cut(s) 360
MvaI CCWGG 1 cut(s) 966
MvnI CGCG 2 cut(s) 181, 599
MwoI GCNNNNNNNGC 5 cut(s) 355, 513, 596, 821, 911
NciI CCSGG 1 cut(s) 793
NdeII GATC 6 cut(s) 4, 29, 73, 304, 877, 1327
NlaIII CATG 6 cut(s) 69, 158, 248, 554, 914, 1368
NlaIV GGNNCC 2 cut(s) 6, 728
NmuCI GTSAC 3 cut(s) 190, 404, 798
NsiI ATGCAT 1 cut(s) 67
NspI RCATGY 3 cut(s) 69, 158, 914
OliI CACNNNNGTG 1 cut(s) 691
PaeR7I CTCGAG 2 cut(s) 741, 1257
PciI ACATGT 1 cut(s) 154
PciSI GCTCTTC 1 cut(s) 840
PctI GAATGC 1 cut(s) 360
PfeI GAWTC 3 cut(s) 173, 658, 1103
PleI GAGTC 5 cut(s) 415, 484, 547, 691, 955
PpsI GAGTC 5 cut(s) 415, 484, 547, 691, 955
PscI ACATGT 1 cut(s) 154
PshAI GACNNNNGTC 1 cut(s) 647
PshBI ATTAAT 1 cut(s) 936
PsiI TTATAA 2 cut(s) 339, 1052
Psp124BI GAGCTC 1 cut(s) 509
Psp6I CCWGG 1 cut(s) 964
PspEI GGTNACC 1 cut(s) 190
PspGI CCWGG 1 cut(s) 964
PspN4I GGNNCC 2 cut(s) 6, 728
PspXI VCTCGAGB 1 cut(s) 741
PstI CTGCAG 1 cut(s) 919
PsuI RGATCY 2 cut(s) 4, 29
PvuII CAGCTG 1 cut(s) 323
RsaI GTAC 1 cut(s) 318
RsaNI GTAC 1 cut(s) 317
RseI CAYNNNNRTG 2 cut(s) 691, 834
SacI GAGCTC 1 cut(s) 509
SacII CCGCGG 1 cut(s) 182
SapI GCTCTTC 1 cut(s) 840
SaqAI TTAA 2 cut(s) 584, 936
Sau3AI GATC 6 cut(s) 4, 29, 73, 304, 877, 1327
SchI GAGTC 5 cut(s) 415, 485, 548, 691, 955
ScrFI CCNGG 2 cut(s) 793, 966
SduI GDGCHC 1 cut(s) 509
SfaNI GCATC 5 cut(s) 52, 316, 525, 673, 1305
SfcI CTRYAG 2 cut(s) 16, 915
Sfr274I CTCGAG 2 cut(s) 741, 1257
Sfr303I CCGCGG 1 cut(s) 182
SgrBI CCGCGG 1 cut(s) 182
SlaI CTCGAG 2 cut(s) 741, 1257
SmiMI CAYNNNNRTG 2 cut(s) 691, 834
SmlI CTYRAG 2 cut(s) 741, 1257
SmoI CTYRAG 2 cut(s) 741, 1257
Sse9I AATT 9 cut(s) 43, 128, 361, 787, 933, 1056, 1155, 1237, 1321
SsiI CCGC 9 cut(s) 125, 179, 181, 599, 815, 1036, 1072, 1113, 1313
SspI AATATT 2 cut(s) 55, 1141
SspMI CTAG 3 cut(s) 522, 731, 1022
SstI GAGCTC 1 cut(s) 509
StyD4I CCNGG 2 cut(s) 791, 964
TaiI ACGT 2 cut(s) 225, 1274
TaqI TCGA 5 cut(s) 291, 742, 856, 1119, 1258
TasI AATT 9 cut(s) 43, 128, 361, 787, 933, 1056, 1155, 1237, 1321
TauI GCSGC 4 cut(s) 602, 818, 1038, 1315
TfiI GAWTC 3 cut(s) 173, 658, 1103
Tru1I TTAA 2 cut(s) 584, 936
Tru9I TTAA 2 cut(s) 584, 936
TscAI CASTG 2 cut(s) 723, 1287
TseFI GTSAC 3 cut(s) 190, 404, 798
TseI GCWGC 6 cut(s) 23, 122, 227, 713, 914, 1025
Tsp45I GTSAC 3 cut(s) 190, 404, 798
TspDTI ATGAA 3 cut(s) 186, 903, 1002
TspRI CASTG 2 cut(s) 723, 1287
VspI ATTAAT 1 cut(s) 936
XagI CCTNNNNNAGG 1 cut(s) 1339
XapI RAATTY 3 cut(s) 43, 128, 1056
XceI RCATGY 3 cut(s) 69, 158, 914
XhoI CTCGAG 2 cut(s) 741, 1257
XmiI GTMKAC 1 cut(s) 1080
XspI CTAG 3 cut(s) 522, 731, 1022
Zsp2I ATGCAT 1 cut(s) 67
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.