RchiOBHm_Chr2g0109381

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000319
Physical Location & Seq
Forward (+)
20755465 .. 20757737
2273 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48320

Sequence Viewer

Length: 1308 bp
ATGGGGTTTAATTCCATGGATCCTCCGGTTTATAAGGCGGCAGCATCAGGTGATCTTCGTTTTCTCAAAGAAGTTAGAGATGGAGACAGATCAGTTGATATTCTCTTTCAGAAGACCCCTAAAAACAACAACGTTCTTCACATAGCTGCTCAGTTCAAGCAAATACAGTTCTTCGAGGAATTCCCAAATCAGATCCAATCTCCGTTGTTTTGGGCCACCAACACCAAGGGTGACACTCCCATGCACATTGCTGCTAGGGTTGGTTGTGTTAAACTAATTGAGTTCCTCATCGATCACGCGAGAAAGTCACAAACTAATGCAGCAGATGTGGAGACCGGACCAGCCGATGCTGAAGCTCATAACGAGTTACTTCGAATGGCTAATTCGGAAAGAGATACAGCTTTGCATGTTGCTGTTAGATGCGGGCACCATGATGTTGTGATTCTGTTAATGGATGCTGATCCTGAATTGTGCTGTTATACCAATAACGCCAACGAATCTCCTTTGTTCTTAGCTGTCTGCAAGGGGTTTCCAAAAATTGGTTCTTGTATCTTGGACAAGTCTCCAGCATCTCTTTCTTTCGAGGGGGTTAAAGGTGTCACAGCTTTGCATGCAGCAGTAACCCGCAATTCAACCTGCAAAGGATTCTCAGTACCTGAACTATTTTGTCCATACATGTTAGACATCGTGAAGATGATGGTGACCAAAAATCCTGAAATAATCAAAGAAGTTGATGAACTTGGTTGGACTCCCTTACACTATGCAGCATTCAGAGGGAATGTATCAGCAATTAGATCGCTGATAAAACGTGACAGTTCTGTAGCTTACATATTAGACAATTGTGGAATGTCTGCTCTTCATGTTGCTGCGTACGGAGGCCGCATAGAAGTAATGAAAGAGTTGATTCAATTGCGGCCTGATACTTGTGATCTGCTCAACCACAAAGGCCAAACGGCTGTACATGCTGCAGTTTTGGGTGAGATGCCGGCGGTTATTAAGTACATTTTGAAGACGCCTGAGCTAGCAGGACTTGTAAACGAAGCAGACAATGAGGGAAATACTCCTTTGCATCTGGCTGCCTCTAAATCGAATTCTATCCTTATGAAAGCCTTGGCAAGTGACCCCAAACTTGACAAGACTGCAACCAATGGTCATCACTCGAAAGCCATTGATATATACCTGGGTAACAATATTGAACTGGTAAGGACTATCTCTTCTACTTATATAATTAAGCTAATTCTTGAGGGAATGGTTAAATTATTGAACTACCCATATATGCCCTCACATAATATAGATATTAATAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

435

Amino Acids

47.79

Weight (kDa)

6.46

Isoelectric Point (pI)

38.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 13 - 102 1.5e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 74 - 154 3.2e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 128 - 185 2e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 227 - 304 4e-12 Ankyrin repeats (3 copies)
Ank_4 PF13637 286 - 334 6.6e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 309 - 380 1.4e-07 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000319)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18590 FvH4_1g18590 FvH4_3g16140 FvH4_3g16141 FvH4_3g16160
malus_domestica MD02G1193600.v1.1 MD04G1020900.v1.1 MD04G1021000.v1.1 MD05G1212100.v1.1 MD05G1212300.v1.1 MD05G1213100.v1.1 MD05G1213400.v1.1 MD10G1197300.v1.1
prunus_persica Prupe.4G144500_v2.0.a1 Prupe.4G144600_v2.0.a1 Prupe.4G144800_v2.0.a1 Prupe.4G144900_v2.0.a1 Prupe.4G145100_v2.0.a1 Prupe.4G145300_v2.0.a1
pyrus_communis pycom02g15730 pycom02g15740 pycom05g19670 pycom05g19680 pycom10g17020 pycom11g27250
rosa_chinensis RchiOBHm_Chr2g0109301 RchiOBHm_Chr2g0109321 RchiOBHm_Chr2g0109341 RchiOBHm_Chr2g0109381 RchiOBHm_Chr3g0482301 RchiOBHm_Chr5g0027111 RchiOBHm_Chr5g0027121 RchiOBHm_Chr5g0027141 RchiOBHm_Chr5g0027181 RchiOBHm_Chr5g0027241
rosa_laevigata RLG00000017731 RLG00000017732 RLG00000032990 RLG00000032992 RLG00000032993 RLG00000032995 RLG00000032997 RLG00000033002
rosa_multiflora Rmu_sc0000135.1_g000002 Rmu_sc0000332.1_g000010 Rmu_sc0000882.1_g000028 Rmu_sc0000882.1_g000032 Rmu_sc0000882.1_g000033 Rmu_sc0000882.1_g000039 Rmu_sc0000882.1_g000043 Rmu_sc0000882.1_g000046 Rmu_sc0006065.1_g000003 Rmu_sc0006065.1_g000012 Rmu_sc0006065.1_g000018 Rmu_sc0006065.1_g000019 Rmu_sc0006065.1_g000022 Rmu_sc0007497.1_g000002 Rmu_sc0013610.1_g000011 Rmu_sc0015338.1_g000006 Rmu_ssc0000357.1_g000035
rosa_roxburghii Rroxscaffold_1G00052250 Rroxscaffold_1G00052280 Rroxscaffold_1G00052290 Rroxscaffold_1G00052310 Rroxscaffold_1G00052330 Rroxscaffold_1G00052360 Rroxscaffold_1G00052380 Rroxscaffold_1G00052390 Rroxscaffold_2G00134310 Rroxscaffold_2G00134330
rosa_rugosa Rorug02G0159400 Rorug05G0097300 Rorug05G0097500 Rorug05G0097600 Rorug05G0097700 Rorug05G0097700 Rorug05G0097700 Rorug05G0122900
rosa_samantha Rh2AG210900 Rh2AG211200 Rh2AG211500 Rh2BG221200 Rh2BG221800 Rh2CG213100 Rh2CG213200 Rh2CG213600 Rh3CG277900 Rh3CG278000 Rh3CG278600 Rh3DG274600 Rh5BG188600 Rh5BG188700 Rh5BG188900 Rh5BG189100 Rh5BG189200 Rh5BG189400 Rh5CG208400 Rh5CG208500 Rh5CG208700 Rh5CG209000 Rh5CG209100 Rh5CG209400 Rh5CG209700 Rh5CG209800 Rh5CG209900 Rh5CG210000 Rh5DG190500 Rh5DG190700 Rh5DG191200 Rh5DG191500
rosa_wichuraiana Rw3G022160 Rw5G017410 Rw5G017420 Rw5G017450 Rw5G017460 Rw5G017470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 33
Acc36I ACCTGC 1 cut(s) 644
AccB1I GGYRCC 1 cut(s) 426
AccB7I CCANNNNNTGG 1 cut(s) 539
AccII CGCG 1 cut(s) 299
AciI CCGC 6 cut(s) 38, 423, 625, 880, 913, 989
AclI AACGTT 1 cut(s) 132
AclWI GGATC 4 cut(s) 14, 27, 187, 455
AcsI RAATTY 2 cut(s) 179, 1090
AcuI CTGAAG 1 cut(s) 372
AcyI GRCGYC 1 cut(s) 1013
AfaI GTAC 4 cut(s) 654, 872, 960, 1001
AfiI CCNNNNNNNGG 1 cut(s) 539
AflIII ACRYGT 1 cut(s) 675
AgsI TTSAA 6 cut(s) 157, 633, 908, 1009, 1196, 1264
AjnI CCWGG 1 cut(s) 1179
AjuI GAANNNNNNNTTGG 2 cut(s) 526, 558
AluBI AGCT 8 cut(s) 146, 356, 401, 515, 605, 824, 1021, 1234
AluI AGCT 8 cut(s) 146, 356, 401, 515, 605, 824, 1021, 1234
Alw26I GTCTC 3 cut(s) 78, 326, 567
AlwI GGATC 4 cut(s) 14, 27, 187, 455
AlwNI CAGNNNCTG 1 cut(s) 656
AoxI GGCC 4 cut(s) 213, 877, 914, 946
ApeKI GCWGC 9 cut(s) 41, 146, 251, 320, 614, 764, 866, 965, 1076
ApoI RAATTY 2 cut(s) 179, 1090
AseI ATTAAT 1 cut(s) 1299
AspS9I GGNCC 2 cut(s) 213, 338
AsuHPI GGTGA 4 cut(s) 62, 242, 712, 989
AsuII TTCGAA 1 cut(s) 373
AsuNHI GCTAGC 1 cut(s) 1021
AvaII GGWCC 1 cut(s) 338
BaeGI GKGCMC 1 cut(s) 429
BamHI GGATCC 1 cut(s) 19
BanI GGYRCC 1 cut(s) 426
BbsI GAAGAC 2 cut(s) 119, 1016
BbvI GCAGC 9 cut(s) 53, 133, 238, 332, 626, 776, 853, 952, 1063
BccI CCATC 2 cut(s) 74, 691
BceAI ACGGC 1 cut(s) 969
BcgI CGANNNNNNTGC 2 cut(s) 777, 811
BciT130I CCWGG 1 cut(s) 1181
BcoDI GTCTC 3 cut(s) 78, 326, 567
BfaI CTAG 2 cut(s) 255, 1022
BfmI CTRYAG 2 cut(s) 819, 966
BfuAI ACCTGC 1 cut(s) 644
Bme1390I CCNGG 1 cut(s) 1181
Bme18I GGWCC 1 cut(s) 338
BmgT120I GGNCC 2 cut(s) 213, 338
BmiI GGNNCC 2 cut(s) 21, 428
BmrFI CCNGG 1 cut(s) 1181
BmsI GCATC 7 cut(s) 53, 337, 410, 445, 578, 972, 1078
BmtI GCTAGC 1 cut(s) 1025
BpiI GAAGAC 2 cut(s) 119, 1016
BpmI CTGGAG 1 cut(s) 549
Bpu10I CCTNAGC 1 cut(s) 1017
Bpu14I TTCGAA 1 cut(s) 373
BpuEI CTTGAG 1 cut(s) 1262
Bsa29I ATCGAT 1 cut(s) 291
BsaBI GATNNNNATC 1 cut(s) 459
BsaHI GRCGYC 1 cut(s) 1013
BsaI GGTCTC 1 cut(s) 326
BsaJI CCNNGG 4 cut(s) 15, 225, 1110, 1180
BsaWI WCCGGW 2 cut(s) 25, 335
Bsc4I CCNNNNNNNGG 1 cut(s) 539
Bse118I RCCGGY 1 cut(s) 985
Bse1I ACTGG 1 cut(s) 1203
Bse3DI GCAATG 1 cut(s) 246
Bse8I GATNNNNATC 1 cut(s) 459
BseBI CCWGG 1 cut(s) 1181
BseCI ATCGAT 1 cut(s) 291
BseDI CCNNGG 4 cut(s) 15, 225, 1110, 1180
BseGI GGATG 1 cut(s) 460
BseJI GATNNNNATC 1 cut(s) 459
BseLI CCNNNNNNNGG 1 cut(s) 539
BseMI GCAATG 1 cut(s) 246
BseMII CTCAG 3 cut(s) 164, 663, 1008
BseNI ACTGG 1 cut(s) 1203
BseSI GKGCMC 1 cut(s) 429
BseXI GCAGC 9 cut(s) 53, 133, 238, 332, 626, 776, 853, 952, 1063
Bsh1236I CGCG 1 cut(s) 299
BshFI GGCC 4 cut(s) 215, 879, 916, 948
BshNI GGYRCC 1 cut(s) 426
BshVI ATCGAT 1 cut(s) 291
BsiSI CCGG 3 cut(s) 26, 336, 986
BsiWI CGTACG 1 cut(s) 870
BslI CCNNNNNNNGG 1 cut(s) 539
BsmAI GTCTC 3 cut(s) 78, 326, 567
BsmI GAATGC 1 cut(s) 767
BsnI GGCC 4 cut(s) 215, 879, 916, 948
Bso31I GGTCTC 1 cut(s) 326
Bsp119I TTCGAA 1 cut(s) 373
Bsp1286I GDGCHC 1 cut(s) 429
Bsp1407I TGTACA 1 cut(s) 958
Bsp143I GATC 8 cut(s) 19, 52, 89, 192, 292, 460, 794, 928
Bsp19I CCATGG 1 cut(s) 15
BspACI CCGC 6 cut(s) 38, 423, 625, 880, 913, 989
BspANI GGCC 4 cut(s) 215, 879, 916, 948
BspCNI CTCAG 3 cut(s) 163, 662, 1009
BspDI ATCGAT 1 cut(s) 291
BspFNI CGCG 1 cut(s) 299
BspLI GGNNCC 2 cut(s) 21, 428
BspMAI CTGCAG 1 cut(s) 970
BspMI ACCTGC 1 cut(s) 644
BspOI GCTAGC 1 cut(s) 1025
BspPI GGATC 4 cut(s) 14, 27, 187, 455
BspQI GCTCTTC 1 cut(s) 861
BspT104I TTCGAA 1 cut(s) 373
BspT107I GGYRCC 1 cut(s) 426
BspTNI GGTCTC 1 cut(s) 326
BsrDI GCAATG 1 cut(s) 246
BsrFI RCCGGY 1 cut(s) 985
BsrGI TGTACA 1 cut(s) 958
BsrI ACTGG 1 cut(s) 1203
BssAI RCCGGY 1 cut(s) 985
BssECI CCNNGG 4 cut(s) 15, 225, 1110, 1180
BssMI GATC 8 cut(s) 19, 52, 89, 192, 292, 460, 794, 928
BssNI GRCGYC 1 cut(s) 1013
BssT1I CCWWGG 3 cut(s) 15, 225, 1110
Bst2UI CCWGG 1 cut(s) 1181
Bst4CI ACNGT 2 cut(s) 168, 815
Bst6I CTCTTC 2 cut(s) 861, 1219
BstACI GRCGYC 1 cut(s) 1013
BstAUI TGTACA 1 cut(s) 958
BstBI TTCGAA 1 cut(s) 373
BstC8I GCNNGC 4 cut(s) 425, 612, 987, 1023
BstDEI CTNAG 4 cut(s) 150, 511, 649, 1017
BstDSI CCRYGG 1 cut(s) 15
BstEII GGTNACC 1 cut(s) 700
BstF5I GGATG 1 cut(s) 460
BstFNI CGCG 1 cut(s) 299
BstKTI GATC 8 cut(s) 22, 55, 92, 195, 295, 463, 797, 931
BstMAI GTCTC 3 cut(s) 78, 326, 567
BstMBI GATC 8 cut(s) 19, 52, 89, 192, 292, 460, 794, 928
BstMWI GCNNNNNNNGC 2 cut(s) 611, 962
BstNI CCWGG 1 cut(s) 1181
BstNSI RCATGY 4 cut(s) 410, 614, 679, 965
BstPI GGTNACC 1 cut(s) 700
BstSCI CCNGG 1 cut(s) 1179
BstSFI CTRYAG 2 cut(s) 819, 966
BstSLI GKGCMC 1 cut(s) 429
BstUI CGCG 1 cut(s) 299
BstV1I GCAGC 9 cut(s) 53, 133, 238, 332, 626, 776, 853, 952, 1063
BstV2I GAAGAC 2 cut(s) 119, 1016
BstX2I RGATCY 2 cut(s) 19, 192
BstYI RGATCY 2 cut(s) 19, 192
Bsu15I ATCGAT 1 cut(s) 291
BsuRI GGCC 4 cut(s) 215, 879, 916, 948
BsuTUI ATCGAT 1 cut(s) 291
BtgI CCRYGG 1 cut(s) 15
BtsCI GGATG 1 cut(s) 460
BveI ACCTGC 1 cut(s) 644
Cac8I GCNNGC 4 cut(s) 425, 612, 987, 1023
CaiI CAGNNNCTG 1 cut(s) 656
Cfr10I RCCGGY 1 cut(s) 985
Cfr13I GGNCC 2 cut(s) 213, 338
ClaI ATCGAT 1 cut(s) 291
CseI GACGC 1 cut(s) 1021
Csp6I GTAC 4 cut(s) 653, 871, 959, 1000
CviAII CATG 8 cut(s) 16, 241, 407, 431, 611, 676, 860, 962
CviQI GTAC 4 cut(s) 653, 871, 959, 1000
DdeI CTNAG 4 cut(s) 150, 511, 649, 1017
DpnI GATC 8 cut(s) 21, 54, 91, 194, 294, 462, 796, 930
DpnII GATC 8 cut(s) 19, 52, 89, 192, 292, 460, 794, 928
Eam1104I CTCTTC 2 cut(s) 861, 1219
EarI CTCTTC 2 cut(s) 861, 1219
Eco130I CCWWGG 3 cut(s) 15, 225, 1110
Eco31I GGTCTC 1 cut(s) 326
Eco47I GGWCC 1 cut(s) 338
Eco57I CTGAAG 1 cut(s) 372
Eco91I GGTNACC 1 cut(s) 700
EcoO65I GGTNACC 1 cut(s) 700
EcoRI GAATTC 2 cut(s) 179, 1090
EcoRII CCWGG 1 cut(s) 1179
EcoT14I CCWWGG 3 cut(s) 15, 225, 1110
ErhI CCWWGG 3 cut(s) 15, 225, 1110
FaeI CATG 8 cut(s) 19, 244, 410, 434, 614, 679, 863, 965
FatI CATG 8 cut(s) 15, 240, 406, 430, 610, 675, 859, 961
FauI CCCGC 2 cut(s) 416, 632
FokI GGATG 1 cut(s) 467
FspBI CTAG 2 cut(s) 255, 1022
GsuI CTGGAG 1 cut(s) 549
HaeIII GGCC 4 cut(s) 215, 879, 916, 948
HapII CCGG 3 cut(s) 26, 336, 986
HgaI GACGC 1 cut(s) 1021
Hin1I GRCGYC 1 cut(s) 1013
Hin1II CATG 8 cut(s) 19, 244, 410, 434, 614, 679, 863, 965
HinfI GANTC 5 cut(s) 442, 497, 645, 748, 904
HpaII CCGG 3 cut(s) 26, 336, 986
HphI GGTGA 4 cut(s) 62, 242, 712, 989
Hpy166II GTNNAC 1 cut(s) 1036
Hpy188I TCNGA 4 cut(s) 111, 192, 388, 773
Hpy188III TCNNGA 4 cut(s) 464, 688, 713, 1241
Hpy8I GTNNAC 1 cut(s) 1036
HpyCH4III ACNGT 2 cut(s) 168, 815
HpyCH4IV ACGT 2 cut(s) 132, 808
HpyF10VI GCNNNNNNNGC 2 cut(s) 611, 962
HpyF3I CTNAG 4 cut(s) 150, 511, 649, 1017
HpySE526I ACGT 2 cut(s) 132, 808
Hsp92I GRCGYC 1 cut(s) 1013
Hsp92II CATG 8 cut(s) 19, 244, 410, 434, 614, 679, 863, 965
KroI GCCGGC 1 cut(s) 985
KroNI GCCGGC 1 cut(s) 987
Kzo9I GATC 8 cut(s) 19, 52, 89, 192, 292, 460, 794, 928
LguI GCTCTTC 1 cut(s) 861
Lsp1109I GCAGC 9 cut(s) 53, 133, 238, 332, 626, 776, 853, 952, 1063
LweI GCATC 7 cut(s) 53, 337, 410, 445, 578, 972, 1078
MaeI CTAG 2 cut(s) 255, 1022
MaeII ACGT 2 cut(s) 132, 808
MaeIII GTNAC 9 cut(s) 230, 306, 366, 598, 619, 700, 809, 1118, 1184
MalI GATC 8 cut(s) 21, 54, 91, 194, 294, 462, 796, 930
MboI GATC 8 cut(s) 19, 52, 89, 192, 292, 460, 794, 928
MboII GAAGA 8 cut(s) 47, 124, 128, 163, 703, 848, 1021, 1206
MfeI CAATTG 2 cut(s) 838, 908
MflI RGATCY 2 cut(s) 19, 192
MhlI GDGCHC 1 cut(s) 429
MlyI GAGTC 1 cut(s) 742
MmeI TCCRAC 1 cut(s) 725
MroNI GCCGGC 1 cut(s) 985
MseI TTAA 8 cut(s) 9, 270, 449, 591, 996, 1230, 1254, 1299
MslI CAYNNNNRTG 2 cut(s) 239, 432
MspI CCGG 3 cut(s) 26, 336, 986
MspR9I CCNGG 1 cut(s) 1181
MunI CAATTG 2 cut(s) 838, 908
Mva1269I GAATGC 1 cut(s) 767
MvaI CCWGG 1 cut(s) 1181
MvnI CGCG 1 cut(s) 299
MwoI GCNNNNNNNGC 2 cut(s) 611, 962
NaeI GCCGGC 1 cut(s) 987
NcoI CCATGG 1 cut(s) 15
NdeII GATC 8 cut(s) 19, 52, 89, 192, 292, 460, 794, 928
NgoMIV GCCGGC 1 cut(s) 985
NheI GCTAGC 1 cut(s) 1021
NlaIII CATG 8 cut(s) 19, 244, 410, 434, 614, 679, 863, 965
NlaIV GGNNCC 2 cut(s) 21, 428
NmuCI GTSAC 6 cut(s) 230, 306, 598, 700, 809, 1118
NspI RCATGY 4 cut(s) 410, 614, 679, 965
NspV TTCGAA 1 cut(s) 373
PaeI GCATGC 1 cut(s) 614
PciI ACATGT 1 cut(s) 675
PciSI GCTCTTC 1 cut(s) 861
PctI GAATGC 1 cut(s) 767
PdiI GCCGGC 1 cut(s) 987
PfeI GAWTC 4 cut(s) 442, 497, 645, 904
Pfl23II CGTACG 1 cut(s) 870
PflMI CCANNNNNTGG 1 cut(s) 539
PleI GAGTC 1 cut(s) 742
PpsI GAGTC 1 cut(s) 742
PscI ACATGT 1 cut(s) 675
PshBI ATTAAT 1 cut(s) 1299
PsiI TTATAA 1 cut(s) 33
Psp1406I AACGTT 1 cut(s) 132
Psp6I CCWGG 1 cut(s) 1179
PspEI GGTNACC 1 cut(s) 700
PspGI CCWGG 1 cut(s) 1179
PspLI CGTACG 1 cut(s) 870
PspN4I GGNNCC 2 cut(s) 21, 428
PspPI GGNCC 2 cut(s) 213, 338
PstI CTGCAG 1 cut(s) 970
PstNI CAGNNNCTG 1 cut(s) 656
PsuI RGATCY 2 cut(s) 19, 192
RsaI GTAC 4 cut(s) 654, 872, 960, 1001
RsaNI GTAC 4 cut(s) 653, 871, 959, 1000
RseI CAYNNNNRTG 2 cut(s) 239, 432
SapI GCTCTTC 1 cut(s) 861
SaqAI TTAA 8 cut(s) 9, 270, 449, 591, 996, 1230, 1254, 1299
Sau3AI GATC 8 cut(s) 19, 52, 89, 192, 292, 460, 794, 928
Sau96I GGNCC 2 cut(s) 213, 338
SchI GAGTC 1 cut(s) 742
ScrFI CCNGG 1 cut(s) 1181
SduI GDGCHC 1 cut(s) 429
SfaNI GCATC 7 cut(s) 53, 337, 410, 445, 578, 972, 1078
SfcI CTRYAG 2 cut(s) 819, 966
SfuI TTCGAA 1 cut(s) 373
SinI GGWCC 1 cut(s) 338
SmiMI CAYNNNNRTG 2 cut(s) 239, 432
SmlI CTYRAG 1 cut(s) 1241
SmoI CTYRAG 1 cut(s) 1241
SphI GCATGC 1 cut(s) 614
SsiI CCGC 6 cut(s) 38, 423, 625, 880, 913, 989
SspI AATATT 1 cut(s) 1192
SspMI CTAG 2 cut(s) 255, 1022
StyD4I CCNGG 1 cut(s) 1179
StyI CCWWGG 3 cut(s) 15, 225, 1110
TaaI ACNGT 2 cut(s) 168, 815
TaiI ACGT 2 cut(s) 135, 811
TaqI TCGA 6 cut(s) 174, 291, 373, 582, 1088, 1160
TatI WGTACW 2 cut(s) 958, 999
TauI GCSGC 3 cut(s) 41, 882, 916
TfiI GAWTC 4 cut(s) 442, 497, 645, 904
Tru1I TTAA 8 cut(s) 9, 270, 449, 591, 996, 1230, 1254, 1299
Tru9I TTAA 8 cut(s) 9, 270, 449, 591, 996, 1230, 1254, 1299
TseFI GTSAC 6 cut(s) 230, 306, 598, 700, 809, 1118
TseI GCWGC 9 cut(s) 41, 146, 251, 320, 614, 764, 866, 965, 1076
Tsp45I GTSAC 6 cut(s) 230, 306, 598, 700, 809, 1118
TspDTI ATGAA 4 cut(s) 750, 848, 908, 1118
TspGWI ACGGA 2 cut(s) 192, 888
Van91I CCANNNNNTGG 1 cut(s) 539
VpaK11BI GGWCC 1 cut(s) 338
VspI ATTAAT 1 cut(s) 1299
XapI RAATTY 2 cut(s) 179, 1090
XceI RCATGY 4 cut(s) 410, 614, 679, 965
XspI CTAG 2 cut(s) 255, 1022
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.