Rmu_sc0000135.1_g000002

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000135.1
OG0000319
Physical Location & Seq
Forward (+)
9851 .. 14876
5026 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000135.1_g000002.1.cds

Sequence Viewer

Length: 2250 bp
atggatccttctgtctatagagcagcaagatctggtgatataaatttcctgaatattgaagatgcatgtattgatcctctccatcaaagaacgcctaaagagaacaatcttcttcacatcgctgtggaattcaagcaaatagatttcttcaaacatgtcaaactcaactatgaatctccgcggttttgggtcaccaacaagtccggcgacactccattgcacgtcgcagccagagtaggctgtcatgcagttgttgagtttgtcattgaccacacaaaatcattccccctcgaaggagctgatgatcaggaaagcgtaccagctgatgctgaaacttataaacaactgctcagaatgcctaattttcaaaatgacacagctttgcatattgctgtgcgatatggtcacgataaggtagcgactctactaatcaaagctgaccctgaactctgttattacacaaatagtgcgaacgagtcgccgttgttccttgctattagaaagagctctccgagcatcgctagttacattttagaggagtctccttctcatgcgtctccttatcttcaagggactaatggtttaacggctttgcacgcggcagtaactcaccaagaccttgcaagcaaaggcattgtgaagactatggtctccacgaatcctgagataataagagagcctgatgcacttgggtggactcctttacattatgcagcactgatagggaacctagaagcaactcgagtgctacttcagtccaatagttctgtttcttacataatggataattccgggtcgtcacctctccatattgcggcttatgcaggccacactaatgtaatggaagagcttattcgatgtcggcctgatacctgtgatctggtcaatgaaaatggtcaatcagctctacatgctgcagttataggttcacgaattaatgttgtcaaatacatattgaagactcctgggctttcaggacttacaaatgaagcagataaagatggaaacactccattacatctagctgctatttgccgcaaccgagacattataagaattttggcacaagaccgcagagtagacattctctctttcaatgaggaatcctcaaccgccctcgacatttttctgggcaacaatattggagaacaggaaattattggcaatagtagaacgattttgcaccacctgaagtgttctgttggtgtgccatttctccaacaacaaatcagccataatttgaagaaaatgacaactcgagagagggatacgtctgacacactggccattattgacatcaagagagaacagccgcaggctaatttggatcaagccttgaaaagtttcttccagttttggaatatggtatccttcattctctctgttcttgcaattctcaatgaatcaactccgctaactgtattatcaacccgtttacccacgcctgcaagtctcattcagttttccattggtggaatggttatagcatttctcgcgggcacggcaacactgcaacccaaacatccccgaggcagtcctgctgataaattgttcagtgtaatggtcctcacttttctcgtattagctgtcatccttgtgtctgtgttcgtagttcagttatatagggccaaccgaaagaagcggtttgggcctcaaaccgaactgaaccgaactgaaccgaactgcaccgcgcccacccctggctacaataatttgaacccgttgtttttcgttcgacccgacccggatttttctccgtcctccggccaaggacccggcccccccgaggtcgcctcacctcgtcctgccgctctgtggcgtcaaaccgcccagaagcttcccctaggccgagatcgaagcaacccagcggagcaaatcgtccggccacgtgaatccttgcggcgcagtggagggtctggtaatgacgtcgcccacgtgaatccttgcggtgccacgcgtcgatgcccagtcctccactccctccatttggcgcgtcgaccattgctgagctcctcctcacgtcagccacgatatggcctgggcctagctgggatctgggcttggtcggtcatggaaatagtcatggggatgactattttcttggctgtagtcaagaaagggttggttttgcccaggcaaaaaacgaccggtggaaggagcaaaatccatatgtcaaggtcatatagtcaggtttttcttgactatgcccagtcaagagcaaaccagtggacttgctctaaggtaaattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

749

Amino Acids

82.66

Weight (kDa)

9.01

Isoelectric Point (pI)

46.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000319)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18590 FvH4_1g18590 FvH4_3g16140 FvH4_3g16141 FvH4_3g16160
malus_domestica MD02G1193600.v1.1 MD04G1020900.v1.1 MD04G1021000.v1.1 MD05G1212100.v1.1 MD05G1212300.v1.1 MD05G1213100.v1.1 MD05G1213400.v1.1 MD10G1197300.v1.1
prunus_persica Prupe.4G144500_v2.0.a1 Prupe.4G144600_v2.0.a1 Prupe.4G144800_v2.0.a1 Prupe.4G144900_v2.0.a1 Prupe.4G145100_v2.0.a1 Prupe.4G145300_v2.0.a1
pyrus_communis pycom02g15730 pycom02g15740 pycom05g19670 pycom05g19680 pycom10g17020 pycom11g27250
rosa_chinensis RchiOBHm_Chr2g0109301 RchiOBHm_Chr2g0109321 RchiOBHm_Chr2g0109341 RchiOBHm_Chr2g0109381 RchiOBHm_Chr3g0482301 RchiOBHm_Chr5g0027111 RchiOBHm_Chr5g0027121 RchiOBHm_Chr5g0027141 RchiOBHm_Chr5g0027181 RchiOBHm_Chr5g0027241
rosa_laevigata RLG00000017731 RLG00000017732 RLG00000032990 RLG00000032992 RLG00000032993 RLG00000032995 RLG00000032997 RLG00000033002
rosa_multiflora Rmu_sc0000135.1_g000002 Rmu_sc0000332.1_g000010 Rmu_sc0000882.1_g000028 Rmu_sc0000882.1_g000032 Rmu_sc0000882.1_g000033 Rmu_sc0000882.1_g000039 Rmu_sc0000882.1_g000043 Rmu_sc0000882.1_g000046 Rmu_sc0006065.1_g000003 Rmu_sc0006065.1_g000012 Rmu_sc0006065.1_g000018 Rmu_sc0006065.1_g000019 Rmu_sc0006065.1_g000022 Rmu_sc0007497.1_g000002 Rmu_sc0013610.1_g000011 Rmu_sc0015338.1_g000006 Rmu_ssc0000357.1_g000035
rosa_roxburghii Rroxscaffold_1G00052250 Rroxscaffold_1G00052280 Rroxscaffold_1G00052290 Rroxscaffold_1G00052310 Rroxscaffold_1G00052330 Rroxscaffold_1G00052360 Rroxscaffold_1G00052380 Rroxscaffold_1G00052390 Rroxscaffold_2G00134310 Rroxscaffold_2G00134330
rosa_rugosa Rorug02G0159400 Rorug05G0097300 Rorug05G0097500 Rorug05G0097600 Rorug05G0097700 Rorug05G0097700 Rorug05G0097700 Rorug05G0122900
rosa_samantha Rh2AG210900 Rh2AG211200 Rh2AG211500 Rh2BG221200 Rh2BG221800 Rh2CG213100 Rh2CG213200 Rh2CG213600 Rh3CG277900 Rh3CG278000 Rh3CG278600 Rh3DG274600 Rh5BG188600 Rh5BG188700 Rh5BG188900 Rh5BG189100 Rh5BG189200 Rh5BG189400 Rh5CG208400 Rh5CG208500 Rh5CG208700 Rh5CG209000 Rh5CG209100 Rh5CG209400 Rh5CG209700 Rh5CG209800 Rh5CG209900 Rh5CG210000 Rh5DG190500 Rh5DG190700 Rh5DG191200 Rh5DG191500
rosa_wichuraiana Rw3G022160 Rw5G017410 Rw5G017420 Rw5G017450 Rw5G017460 Rw5G017470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 339, 1052
AatII GACGTC 1 cut(s) 1929
AccB1I GGYRCC 1 cut(s) 1949
AccB7I CCANNNNNTGG 1 cut(s) 2033
AccBSI CCGCTC 1 cut(s) 1811
AccI GTMKAC 2 cut(s) 1080, 1996
AccII CGCG 6 cut(s) 181, 599, 1496, 1691, 1957, 1993
AclWI GGATC 4 cut(s) 12, 68, 1335, 2060
AcoI YGGCCR 3 cut(s) 1284, 1765, 1883
AcsI RAATTY 3 cut(s) 43, 128, 1056
AcuI CTGAAG 2 cut(s) 737, 1211
AcvI CACGTG 2 cut(s) 1889, 1936
AcyI GRCGYC 2 cut(s) 1819, 1926
AfaI GTAC 1 cut(s) 318
AfiI CCNNNNNNNGG 9 cut(s) 293, 814, 1700, 1763, 1786, 1815, 1987, 2033, 2154
AflIII ACRYGT 2 cut(s) 154, 1955
AgeI ACCGGT 1 cut(s) 2147
AjiI CACGTC 2 cut(s) 223, 2021
AjnI CCWGG 4 cut(s) 964, 1699, 2037, 2132
AleI CACNNNNGTG 1 cut(s) 691
Alw21I GWGCWC 2 cut(s) 509, 2012
Alw26I GTCTC 5 cut(s) 546, 561, 655, 1038, 1457
AlwI GGATC 4 cut(s) 12, 68, 1335, 2060
Ama87I CYCGRG 4 cut(s) 741, 1257, 1527, 1784
ApeKI GCWGC 5 cut(s) 23, 227, 713, 914, 1025
ApoI RAATTY 3 cut(s) 43, 128, 1056
AseI ATTAAT 1 cut(s) 936
AsiGI ACCGGT 1 cut(s) 2147
Asp700I GAANNNNTTC 1 cut(s) 1343
AspA2I CCTAGG 1 cut(s) 1843
AspLEI GCGC 3 cut(s) 1693, 1905, 1993
AspS9I GGNCC 6 cut(s) 1564, 1626, 1649, 1772, 1778, 2041
AsuC2I CCSGG 3 cut(s) 793, 1745, 1776
AsuHPI GGTGA 5 cut(s) 47, 184, 602, 792, 1788
AvaI CYCGRG 4 cut(s) 741, 1257, 1527, 1784
AvaII GGWCC 2 cut(s) 1564, 1772
AvrII CCTAGG 1 cut(s) 1843
BaeGI GKGCMC 1 cut(s) 1502
BalI TGGCCA 1 cut(s) 1286
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 1 cut(s) 1949
BanII GRGCYC 2 cut(s) 509, 2012
BbrPI CACGTG 2 cut(s) 1889, 1936
BbsI GAAGAC 2 cut(s) 647, 965
Bbv12I GWGCWC 2 cut(s) 509, 2012
BbvI GCAGC 5 cut(s) 35, 239, 725, 901, 1012
BccI CCATC 2 cut(s) 90, 995
BceAI ACGGC 3 cut(s) 466, 603, 1518
BciT130I CCWGG 4 cut(s) 966, 1701, 2039, 2134
BciVI GTATCC 2 cut(s) 1261, 1378
BclI TGATCA 1 cut(s) 304
BcnI CCSGG 3 cut(s) 793, 1745, 1776
BcoDI GTCTC 5 cut(s) 546, 561, 655, 1038, 1457
BfaI CTAG 5 cut(s) 522, 731, 1022, 1844, 2045
BfmI CTRYAG 3 cut(s) 16, 915, 2106
BfuI GTATCC 2 cut(s) 1261, 1378
BglII AGATCT 1 cut(s) 29
BlnI CCTAGG 1 cut(s) 1843
BlpI GCTNAGC 1 cut(s) 2006
Bme1390I CCNGG 7 cut(s) 793, 966, 1701, 1745, 1776, 2039, 2134
Bme18I GGWCC 2 cut(s) 1564, 1772
BmeT110I CYCGRG 4 cut(s) 741, 1257, 1527, 1784
BmgBI CACGTC 2 cut(s) 223, 2021
BmgT120I GGNCC 6 cut(s) 1564, 1626, 1649, 1772, 1778, 2041
BmiI GGNNCC 5 cut(s) 6, 728, 1774, 1780, 1951
BmrFI CCNGG 7 cut(s) 793, 966, 1701, 1745, 1776, 2039, 2134
BmrI ACTGGG 2 cut(s) 1961, 2203
BmsI GCATC 5 cut(s) 52, 316, 525, 673, 1952
BmuI ACTGGG 2 cut(s) 1961, 2203
BoxI GACNNNNGTC 1 cut(s) 647
BpiI GAAGAC 2 cut(s) 647, 965
BplI GAGNNNNNCTC 4 cut(s) 1091, 1123, 1778, 1810
Bpu1102I GCTNAGC 1 cut(s) 2006
BpuMI CCSGG 3 cut(s) 793, 1745, 1776
BsaAI YACGTR 2 cut(s) 1889, 1936
BsaHI GRCGYC 2 cut(s) 1819, 1926
BsaI GGTCTC 1 cut(s) 655
BsaJI CCNNGG 9 cut(s) 179, 965, 1528, 1699, 1768, 1785, 1843, 2038, 2132
BsaWI WCCGGW 1 cut(s) 2147
Bsc4I CCNNNNNNNGG 9 cut(s) 293, 814, 1700, 1763, 1786, 1815, 1987, 2033, 2154
Bse118I RCCGGY 1 cut(s) 2147
Bse1I ACTGG 5 cut(s) 1287, 1351, 1967, 2209, 2224
Bse3DI GCAATG 2 cut(s) 215, 2000
BseBI CCWGG 4 cut(s) 966, 1701, 2039, 2134
BseDI CCNNGG 9 cut(s) 179, 965, 1528, 1699, 1768, 1785, 1843, 2038, 2132
BseGI GGATG 3 cut(s) 1522, 1590, 2094
BseLI CCNNNNNNNGG 9 cut(s) 293, 814, 1700, 1763, 1786, 1815, 1987, 2033, 2154
BseMI GCAATG 2 cut(s) 215, 2000
BseMII CTCAG 3 cut(s) 364, 654, 1997
BseNI ACTGG 5 cut(s) 1287, 1351, 1967, 2209, 2224
BseRI GAGGAG 3 cut(s) 551, 2002, 2005
BseSI GKGCMC 1 cut(s) 1502
BseXI GCAGC 5 cut(s) 35, 239, 725, 901, 1012
BseYI CCCAGC 2 cut(s) 1864, 2048
BsgI GTGCAG 1 cut(s) 1669
Bsh1236I CGCG 6 cut(s) 181, 599, 1496, 1691, 1957, 1993
Bsh1285I CGRYCG 1 cut(s) 2148
BshNI GGYRCC 1 cut(s) 1949
BshTI ACCGGT 1 cut(s) 2147
BsiEI CGRYCG 1 cut(s) 2148
BsiHKAI GWGCWC 2 cut(s) 509, 2012
BsiHKCI CYCGRG 4 cut(s) 741, 1257, 1527, 1784
BsiSI CCGG 7 cut(s) 204, 792, 1745, 1764, 1776, 1882, 2148
BslFI GGGAC 1 cut(s) 586
BslI CCNNNNNNNGG 9 cut(s) 293, 814, 1700, 1763, 1786, 1815, 1987, 2033, 2154
BsmAI GTCTC 5 cut(s) 546, 561, 655, 1038, 1457
BsmBI CGTCTC 1 cut(s) 561
BsmFI GGGAC 1 cut(s) 586
BsmI GAATGC 1 cut(s) 360
Bso31I GGTCTC 1 cut(s) 655
BsoBI CYCGRG 4 cut(s) 741, 1257, 1527, 1784
Bsp1286I GDGCHC 3 cut(s) 509, 1502, 2012
Bsp143I GATC 8 cut(s) 4, 29, 73, 304, 877, 1327, 1852, 2052
Bsp1720I GCTNAGC 1 cut(s) 2006
BspCNI CTCAG 3 cut(s) 363, 655, 1998
BspFNI CGCG 6 cut(s) 181, 599, 1496, 1691, 1957, 1993
BspLI GGNNCC 5 cut(s) 6, 728, 1774, 1780, 1951
BspMAI CTGCAG 1 cut(s) 919
BspPI GGATC 4 cut(s) 12, 68, 1335, 2060
BspQI GCTCTTC 1 cut(s) 840
BspT107I GGYRCC 1 cut(s) 1949
BspTNI GGTCTC 1 cut(s) 655
BsrBI CCGCTC 1 cut(s) 1811
BsrDI GCAATG 2 cut(s) 215, 2000
BsrFI RCCGGY 1 cut(s) 2147
BsrI ACTGG 5 cut(s) 1287, 1351, 1967, 2209, 2224
BssAI RCCGGY 1 cut(s) 2147
BssECI CCNNGG 9 cut(s) 179, 965, 1528, 1699, 1768, 1785, 1843, 2038, 2132
BssMI GATC 8 cut(s) 4, 29, 73, 304, 877, 1327, 1852, 2052
BssNI GRCGYC 2 cut(s) 1819, 1926
BssT1I CCWWGG 2 cut(s) 1768, 1843
Bst2UI CCWGG 4 cut(s) 966, 1701, 2039, 2134
Bst4CI ACNGT 1 cut(s) 1420
Bst6I CTCTTC 1 cut(s) 840
BstACI GRCGYC 2 cut(s) 1819, 1926
BstBAI YACGTR 2 cut(s) 1889, 1936
BstC8I GCNNGC 6 cut(s) 597, 625, 826, 1317, 1446, 1498
BstDEI CTNAG 4 cut(s) 350, 663, 2006, 2238
BstDSI CCRYGG 1 cut(s) 179
BstEII GGTNACC 1 cut(s) 190
BstF5I GGATG 3 cut(s) 1522, 1590, 2094
BstFNI CGCG 6 cut(s) 181, 599, 1496, 1691, 1957, 1993
BstHHI GCGC 3 cut(s) 1693, 1905, 1993
BstKTI GATC 8 cut(s) 7, 32, 76, 307, 880, 1330, 1855, 2055
BstMAI GTCTC 5 cut(s) 546, 561, 655, 1038, 1457
BstMBI GATC 8 cut(s) 4, 29, 73, 304, 877, 1327, 1852, 2052
BstMCI CGRYCG 1 cut(s) 2148
BstMWI GCNNNNNNNGC 8 cut(s) 355, 513, 596, 821, 911, 1493, 1502, 1648
BstNI CCWGG 4 cut(s) 966, 1701, 2039, 2134
BstNSI RCATGY 3 cut(s) 69, 158, 914
BstPAI GACNNNNGTC 1 cut(s) 647
BstPI GGTNACC 1 cut(s) 190
BstSCI CCNGG 7 cut(s) 791, 964, 1699, 1743, 1774, 2037, 2132
BstSFI CTRYAG 3 cut(s) 16, 915, 2106
BstSLI GKGCMC 1 cut(s) 1502
BstUI CGCG 6 cut(s) 181, 599, 1496, 1691, 1957, 1993
BstV1I GCAGC 5 cut(s) 35, 239, 725, 901, 1012
BstV2I GAAGAC 2 cut(s) 647, 965
BstX2I RGATCY 3 cut(s) 4, 29, 2052
BstYI RGATCY 3 cut(s) 4, 29, 2052
BsuI GTATCC 2 cut(s) 1261, 1378
BtgI CCRYGG 1 cut(s) 179
BtgZI GCGATG 2 cut(s) 103, 502
BtrI CACGTC 2 cut(s) 223, 2021
BtsCI GGATG 3 cut(s) 1522, 1590, 2094
BtsI GCAGTG 2 cut(s) 1508, 1912
BtsIMutI CAGTG 6 cut(s) 716, 1280, 1508, 1561, 1912, 2231
Cac8I GCNNGC 6 cut(s) 597, 625, 826, 1317, 1446, 1498
CfoI GCGC 3 cut(s) 1693, 1905, 1993
Cfr10I RCCGGY 1 cut(s) 2147
Cfr13I GGNCC 6 cut(s) 1564, 1626, 1649, 1772, 1778, 2041
Cfr42I CCGCGG 1 cut(s) 182
CseI GACGC 4 cut(s) 543, 1808, 1946, 1982
Csp6I GTAC 1 cut(s) 317
CspAI ACCGGT 1 cut(s) 2147
CviAII CATG 7 cut(s) 66, 155, 245, 551, 911, 2071, 2083
CviQI GTAC 1 cut(s) 317
DdeI CTNAG 4 cut(s) 350, 663, 2006, 2238
DpnI GATC 8 cut(s) 6, 31, 75, 306, 879, 1329, 1854, 2054
DpnII GATC 8 cut(s) 4, 29, 73, 304, 877, 1327, 1852, 2052
EaeI YGGCCR 3 cut(s) 1284, 1765, 1883
Eam1104I CTCTTC 1 cut(s) 840
EarI CTCTTC 1 cut(s) 840
Ecl136II GAGCTC 2 cut(s) 507, 2010
Eco130I CCWWGG 2 cut(s) 1768, 1843
Eco24I GRGCYC 2 cut(s) 509, 2012
Eco31I GGTCTC 1 cut(s) 655
Eco47I GGWCC 2 cut(s) 1564, 1772
Eco53kI GAGCTC 2 cut(s) 507, 2010
Eco57I CTGAAG 2 cut(s) 737, 1211
Eco72I CACGTG 2 cut(s) 1889, 1936
Eco88I CYCGRG 4 cut(s) 741, 1257, 1527, 1784
Eco91I GGTNACC 1 cut(s) 190
EcoICRI GAGCTC 2 cut(s) 507, 2010
EcoO109I RGGNCCY 1 cut(s) 1772
EcoO65I GGTNACC 1 cut(s) 190
EcoRI GAATTC 1 cut(s) 128
EcoRII CCWGG 4 cut(s) 964, 1699, 2037, 2132
EcoT14I CCWWGG 2 cut(s) 1768, 1843
EcoT22I ATGCAT 1 cut(s) 67
EcoT38I GRGCYC 2 cut(s) 509, 2012
ErhI CCWWGG 2 cut(s) 1768, 1843
Esp3I CGTCTC 1 cut(s) 561
FaeI CATG 7 cut(s) 69, 158, 248, 554, 914, 2074, 2086
FaqI GGGAC 1 cut(s) 586
FatI CATG 7 cut(s) 65, 154, 244, 550, 910, 2070, 2082
FauI CCCGC 1 cut(s) 1489
FauNDI CATATG 1 cut(s) 2169
FbaI TGATCA 1 cut(s) 304
FblI GTMKAC 2 cut(s) 1080, 1996
FokI GGATG 3 cut(s) 1509, 1577, 2101
FriOI GRGCYC 2 cut(s) 509, 2012
FspBI CTAG 5 cut(s) 522, 731, 1022, 1844, 2045
GlaI GCGC 3 cut(s) 1692, 1904, 1992
GsaI CCCAGC 2 cut(s) 1868, 2052
HapII CCGG 7 cut(s) 204, 792, 1745, 1764, 1776, 1882, 2148
HgaI GACGC 4 cut(s) 543, 1808, 1946, 1982
HhaI GCGC 3 cut(s) 1693, 1905, 1993
Hin1I GRCGYC 2 cut(s) 1819, 1926
Hin1II CATG 7 cut(s) 69, 158, 248, 554, 914, 2074, 2086
Hin6I GCGC 3 cut(s) 1691, 1903, 1991
HinP1I GCGC 3 cut(s) 1691, 1903, 1991
HincII GTYRAC 1 cut(s) 1997
HindII GTYRAC 1 cut(s) 1997
HindIII AAGCTT 1 cut(s) 1835
HpaII CCGG 7 cut(s) 204, 792, 1745, 1764, 1776, 1882, 2148
HphI GGTGA 5 cut(s) 47, 184, 602, 792, 1788
Hpy166II GTNNAC 6 cut(s) 696, 929, 1081, 1436, 1997, 2229
Hpy188I TCNGA 3 cut(s) 353, 513, 1276
Hpy8I GTNNAC 6 cut(s) 696, 929, 1081, 1436, 1997, 2229
Hpy99I CGWCG 4 cut(s) 227, 1931, 1962, 1998
HpyAV CCTTC 5 cut(s) 18, 287, 555, 1381, 2148
HpyCH4III ACNGT 1 cut(s) 1420
HpyCH4IV ACGT 6 cut(s) 222, 1271, 1888, 1926, 1935, 2020
HpyF10VI GCNNNNNNNGC 8 cut(s) 355, 513, 596, 821, 911, 1493, 1502, 1648
HpyF3I CTNAG 4 cut(s) 350, 663, 2006, 2238
HpySE526I ACGT 6 cut(s) 222, 1271, 1888, 1926, 1935, 2020
Hsp92I GRCGYC 2 cut(s) 1819, 1926
Hsp92II CATG 7 cut(s) 69, 158, 248, 554, 914, 2074, 2086
HspAI GCGC 3 cut(s) 1691, 1903, 1991
Ksp22I TGATCA 1 cut(s) 304
KspI CCGCGG 1 cut(s) 182
Kzo9I GATC 8 cut(s) 4, 29, 73, 304, 877, 1327, 1852, 2052
LguI GCTCTTC 1 cut(s) 840
LmnI GCTCC 4 cut(s) 296, 1870, 2015, 2157
Lsp1109I GCAGC 5 cut(s) 35, 239, 725, 901, 1012
LweI GCATC 5 cut(s) 52, 316, 525, 673, 1952
MaeI CTAG 5 cut(s) 522, 731, 1022, 1844, 2045
MaeII ACGT 6 cut(s) 222, 1271, 1888, 1926, 1935, 2020
MaeIII GTNAC 5 cut(s) 190, 404, 524, 604, 798
MalI GATC 8 cut(s) 6, 31, 75, 306, 879, 1329, 1854, 2054
MbiI CCGCTC 1 cut(s) 1811
MboI GATC 8 cut(s) 4, 29, 73, 304, 877, 1327, 1852, 2052
MflI RGATCY 3 cut(s) 4, 29, 2052
MhlI GDGCHC 3 cut(s) 509, 1502, 2012
MlsI TGGCCA 1 cut(s) 1286
MluI ACGCGT 1 cut(s) 1955
MluNI TGGCCA 1 cut(s) 1286
MlyI GAGTC 5 cut(s) 415, 485, 548, 691, 955
MmeI TCCRAC 1 cut(s) 1243
Mox20I TGGCCA 1 cut(s) 1286
Mph1103I ATGCAT 1 cut(s) 67
MroXI GAANNNNTTC 1 cut(s) 1343
MscI TGGCCA 1 cut(s) 1286
MseI TTAA 2 cut(s) 584, 936
MslI CAYNNNNRTG 5 cut(s) 122, 691, 834, 1595, 2087
Msp20I TGGCCA 1 cut(s) 1286
MspA1I CMGCKG 3 cut(s) 181, 323, 1868
MspI CCGG 7 cut(s) 204, 792, 1745, 1764, 1776, 1882, 2148
MspR9I CCNGG 7 cut(s) 793, 966, 1701, 1745, 1776, 2039, 2134
Mva1269I GAATGC 1 cut(s) 360
MvaI CCWGG 4 cut(s) 966, 1701, 2039, 2134
MvnI CGCG 6 cut(s) 181, 599, 1496, 1691, 1957, 1993
MwoI GCNNNNNNNGC 8 cut(s) 355, 513, 596, 821, 911, 1493, 1502, 1648
NciI CCSGG 3 cut(s) 793, 1745, 1776
NdeI CATATG 1 cut(s) 2169
NdeII GATC 8 cut(s) 4, 29, 73, 304, 877, 1327, 1852, 2052
NlaIII CATG 7 cut(s) 69, 158, 248, 554, 914, 2074, 2086
NlaIV GGNNCC 5 cut(s) 6, 728, 1774, 1780, 1951
NmeAIII GCCGAG 1 cut(s) 1874
NmuCI GTSAC 3 cut(s) 190, 404, 798
NsiI ATGCAT 1 cut(s) 67
NspI RCATGY 3 cut(s) 69, 158, 914
OliI CACNNNNGTG 1 cut(s) 691
PaeR7I CTCGAG 2 cut(s) 741, 1257
PciI ACATGT 1 cut(s) 154
PciSI GCTCTTC 1 cut(s) 840
PcsI WCGNNNNNNNCGW 3 cut(s) 1737, 1932, 2026
PctI GAATGC 1 cut(s) 360
PdmI GAANNNNTTC 1 cut(s) 1343
PfeI GAWTC 6 cut(s) 173, 658, 1103, 1403, 1892, 1939
PflMI CCANNNNNTGG 1 cut(s) 2033
PinAI ACCGGT 1 cut(s) 2147
PleI GAGTC 5 cut(s) 415, 484, 547, 691, 955
PmaCI CACGTG 2 cut(s) 1889, 1936
PmlI CACGTG 2 cut(s) 1889, 1936
PpsI GAGTC 5 cut(s) 415, 484, 547, 691, 955
Ppu21I YACGTR 2 cut(s) 1889, 1936
PpuMI RGGWCCY 1 cut(s) 1772
PscI ACATGT 1 cut(s) 154
PshAI GACNNNNGTC 1 cut(s) 647
PshBI ATTAAT 1 cut(s) 936
PsiI TTATAA 2 cut(s) 339, 1052
Psp124BI GAGCTC 2 cut(s) 509, 2012
Psp5II RGGWCCY 1 cut(s) 1772
Psp6I CCWGG 4 cut(s) 964, 1699, 2037, 2132
PspCI CACGTG 2 cut(s) 1889, 1936
PspEI GGTNACC 1 cut(s) 190
PspFI CCCAGC 2 cut(s) 1864, 2048
PspGI CCWGG 4 cut(s) 964, 1699, 2037, 2132
PspN4I GGNNCC 5 cut(s) 6, 728, 1774, 1780, 1951
PspPI GGNCC 6 cut(s) 1564, 1626, 1649, 1772, 1778, 2041
PspPPI RGGWCCY 1 cut(s) 1772
PspXI VCTCGAGB 1 cut(s) 741
PstI CTGCAG 1 cut(s) 919
PsuI RGATCY 3 cut(s) 4, 29, 2052
PvuII CAGCTG 1 cut(s) 323
RsaI GTAC 1 cut(s) 318
RsaNI GTAC 1 cut(s) 317
RseI CAYNNNNRTG 5 cut(s) 122, 691, 834, 1595, 2087
SacI GAGCTC 2 cut(s) 509, 2012
SacII CCGCGG 1 cut(s) 182
SalI GTCGAC 1 cut(s) 1995
SapI GCTCTTC 1 cut(s) 840
SaqAI TTAA 2 cut(s) 584, 936
Sau3AI GATC 8 cut(s) 4, 29, 73, 304, 877, 1327, 1852, 2052
Sau96I GGNCC 6 cut(s) 1564, 1626, 1649, 1772, 1778, 2041
SchI GAGTC 5 cut(s) 415, 485, 548, 691, 955
ScrFI CCNGG 7 cut(s) 793, 966, 1701, 1745, 1776, 2039, 2134
SduI GDGCHC 3 cut(s) 509, 1502, 2012
SfaNI GCATC 5 cut(s) 52, 316, 525, 673, 1952
SfcI CTRYAG 3 cut(s) 16, 915, 2106
Sfr274I CTCGAG 2 cut(s) 741, 1257
Sfr303I CCGCGG 1 cut(s) 182
SgrBI CCGCGG 1 cut(s) 182
SinI GGWCC 2 cut(s) 1564, 1772
SlaI CTCGAG 2 cut(s) 741, 1257
SmiMI CAYNNNNRTG 5 cut(s) 122, 691, 834, 1595, 2087
SmlI CTYRAG 2 cut(s) 741, 1257
SmoI CTYRAG 2 cut(s) 741, 1257
SspI AATATT 2 cut(s) 55, 1141
SspMI CTAG 5 cut(s) 522, 731, 1022, 1844, 2045
SstI GAGCTC 2 cut(s) 509, 2012
StyD4I CCNGG 7 cut(s) 791, 964, 1699, 1743, 1774, 2037, 2132
StyI CCWWGG 2 cut(s) 1768, 1843
TaaI ACNGT 1 cut(s) 1420
TaiI ACGT 6 cut(s) 225, 1274, 1891, 1929, 1938, 2023
TaqI TCGA 9 cut(s) 291, 742, 856, 1119, 1258, 1735, 1855, 1960, 1996
TaqII GACCGA 1 cut(s) 2056
TauI GCSGC 6 cut(s) 602, 818, 1038, 1315, 1811, 1903
TfiI GAWTC 6 cut(s) 173, 658, 1103, 1403, 1892, 1939
Tru1I TTAA 2 cut(s) 584, 936
Tru9I TTAA 2 cut(s) 584, 936
TscAI CASTG 6 cut(s) 723, 1287, 1515, 1561, 1912, 2231
TseFI GTSAC 3 cut(s) 190, 404, 798
TseI GCWGC 5 cut(s) 23, 227, 713, 914, 1025
Tsp45I GTSAC 3 cut(s) 190, 404, 798
TspDTI ATGAA 5 cut(s) 186, 903, 1002, 1363, 1416
TspGWI ACGGA 1 cut(s) 1746
TspRI CASTG 6 cut(s) 723, 1287, 1515, 1561, 1912, 2231
Van91I CCANNNNNTGG 1 cut(s) 2033
VpaK11BI GGWCC 2 cut(s) 1564, 1772
VspI ATTAAT 1 cut(s) 936
XapI RAATTY 3 cut(s) 43, 128, 1056
XceI RCATGY 3 cut(s) 69, 158, 914
XcmI CCANNNNNNNNNTGG 1 cut(s) 1474
XhoI CTCGAG 2 cut(s) 741, 1257
XmaJI CCTAGG 1 cut(s) 1843
XmiI GTMKAC 2 cut(s) 1080, 1996
XmnI GAANNNNTTC 1 cut(s) 1343
XspI CTAG 5 cut(s) 522, 731, 1022, 1844, 2045
ZraI GACGTC 1 cut(s) 1927
Zsp2I ATGCAT 1 cut(s) 67
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.