Prupe.4G144600_v2.0.a1

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000319
Physical Location & Seq
Forward (+)
8305099 .. 8307801
2703 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G144600.1

Sequence Viewer

Length: 1983 bp
ATGGAATACATGGATCGTTTTCTGCATGACGCAGCAACAAAGGGTGATCTTAGTTTTTTGGAAAAAATTAGAAATGGTGATGTATCGATTGATCTTGCAAGTCAGAAAACGCCTAAAGACAACAATGTTCTTCACATTGCGGCTGAATTCAAGCAAATGAATTTCTTTAAAGAAGTCAAGTTTCATCATCCTCAATCTCCACGGTTTTGGGACACCAACAAGAACCGCGAAACTCCTCTCCATGTTGCTGCAAGAGTAGGATGTGATGAAATAGTGGAGTTCATCATTGCTAAGATGAAACCTCTTGAAGAAGTTGATTTGGAAGACGGACCAATTAATGAGGAGGAAATCACACCAGCTGCTGAGGAAACCACGCCATCTGGTGAGGAAATCTTACAACATTATGAGGAAAGCAGATCATCTGCTGAGGAAAACAGACCAGTTGATGGGGAAATCAGATCATCTGCTGAGGAAATAAGACCAAACAGATCAGTTGATGGGGAAATCAGACCAGATGGTGTTAAACCTTATAAAAAACTACTCCGAATGAAAAATTCGGAAAAGGATACAGCATTGCATGTTGCTGTACGATATCGTCACGATAGGGTGGTGGCTCAGTTAATGAAAGCCGATCCTGAATTATGTTGTTTTACTAATAGCGCCGCAGAGTCACCCTTATTCCTAGCTGTTAGAACGGGCTCTCCAAGCATTGCTCTTTATATTCTAAACGAGTCTCCCTCTGATAGACCTCCTTCTTTTCAGGGGACAAATGGTGTGACAGCTTTGCATGCAGCTGTCACTCGCAGACCCCTTACCCACCAAGGCATCGTGGCAACTATGGTTTCCAAAAATCATGAAATAATCAAACAAGCAGACGACATTGGGTGGACTCCCTTACACTATGCAGCATTGAGAGGTAACCTTAAAGCAACTCAACTGCTGATTGGAAAGGAGAAGTCTGCTTGTTACATCTTGGACAAACTTGGGTTGTCAGCTCTCCACATCGCCGCATATGCAGGGCACACCAAAATATTGGAAGAGTTGATTGGATGTGAGCCTGCTACTTGTCATTTGGTCAACCACAAAGGTCAAACAGCTCTGCATGCTGCCGTCGTAGGTGAAAAAATAAACGTTATAAAGTACGTTCTGAAGACGCCTAAGCTTGGGAGACTTCTAAATCAAGCAGATAACGAAGGGAACACTCCTTTGCATCTTGCTGCCATTTGCCGAAATCATGGAATGATAAAAATCTTGTCAACAGACCCTAGGTTGGACAAAACGGCTATCAATAAAAAATTCTTAACGGTTGCCGACATTTTGCGCGAGGACAAGATGGAACAAAAGGAGAGGACCAATAGTGCCGAGGTTAGGAAGTACCCGATTTGGTCCTTGACCGCTGGGGTGCCATATTTTCAACAACAAATCACCCTTGTGTTTACGAATTTAGAATCTCCGGAGAAGAAAGATGAGGCTGATACGCCAGCCATTACACATGGGACCTTGAAAAGACATGATACCAAACTATTGGTAGCAACGCTCATTGCAACCGTCACATTTGCAGCGTCCATCAATGTTCCTGGAGGGTTCAAAACCGACGGAAGGCCGGCTTTAGAAGACAATGCATATTTCCGAGTGTGTGGGGTTTTTAACATGTATGCCTTCTTTTTCTCAGTTCTTGCGATATCTAACGAATACGCTCCGCTACGGTTCCTATCTACCCATTTACCCACACCTGCAAGTCTCATTCAGTTTTCAATTGGTGGGATGGTAATAGCATTTGTTGCAGCCATACTGGCATTGTCGCAGCCAAAACGCCCCAATGAAAGTCTGTTTAAATATTTGTTTGGCACACCCGTTGATTTGGTGCTCGGTCTAATATTTGCCATATTTGTTTGCGCATTAGTTTTAATCCCCATTTATAGGTCTCAACTGCAAATAATGCGGGGGATAAGGATCCGTGAGCTCCGGAACTACGTTATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 Ank_5 PGG

Protein Analysis

661

Amino Acids

73.6

Weight (kDa)

7.34

Isoelectric Point (pI)

40.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000319)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18590 FvH4_1g18590 FvH4_3g16140 FvH4_3g16141 FvH4_3g16160
malus_domestica MD02G1193600.v1.1 MD04G1020900.v1.1 MD04G1021000.v1.1 MD05G1212100.v1.1 MD05G1212300.v1.1 MD05G1213100.v1.1 MD05G1213400.v1.1 MD10G1197300.v1.1
prunus_persica Prupe.4G144500_v2.0.a1 Prupe.4G144600_v2.0.a1 Prupe.4G144800_v2.0.a1 Prupe.4G144900_v2.0.a1 Prupe.4G145100_v2.0.a1 Prupe.4G145300_v2.0.a1
pyrus_communis pycom02g15730 pycom02g15740 pycom05g19670 pycom05g19680 pycom10g17020 pycom11g27250
rosa_chinensis RchiOBHm_Chr2g0109301 RchiOBHm_Chr2g0109321 RchiOBHm_Chr2g0109341 RchiOBHm_Chr2g0109381 RchiOBHm_Chr3g0482301 RchiOBHm_Chr5g0027111 RchiOBHm_Chr5g0027121 RchiOBHm_Chr5g0027141 RchiOBHm_Chr5g0027181 RchiOBHm_Chr5g0027241
rosa_laevigata RLG00000017731 RLG00000017732 RLG00000032990 RLG00000032992 RLG00000032993 RLG00000032995 RLG00000032997 RLG00000033002
rosa_multiflora Rmu_sc0000135.1_g000002 Rmu_sc0000332.1_g000010 Rmu_sc0000882.1_g000028 Rmu_sc0000882.1_g000032 Rmu_sc0000882.1_g000033 Rmu_sc0000882.1_g000039 Rmu_sc0000882.1_g000043 Rmu_sc0000882.1_g000046 Rmu_sc0006065.1_g000003 Rmu_sc0006065.1_g000012 Rmu_sc0006065.1_g000018 Rmu_sc0006065.1_g000019 Rmu_sc0006065.1_g000022 Rmu_sc0007497.1_g000002 Rmu_sc0013610.1_g000011 Rmu_sc0015338.1_g000006 Rmu_ssc0000357.1_g000035
rosa_roxburghii Rroxscaffold_1G00052250 Rroxscaffold_1G00052280 Rroxscaffold_1G00052290 Rroxscaffold_1G00052310 Rroxscaffold_1G00052330 Rroxscaffold_1G00052360 Rroxscaffold_1G00052380 Rroxscaffold_1G00052390 Rroxscaffold_2G00134310 Rroxscaffold_2G00134330
rosa_rugosa Rorug02G0159400 Rorug05G0097300 Rorug05G0097500 Rorug05G0097600 Rorug05G0097700 Rorug05G0097700 Rorug05G0097700 Rorug05G0122900
rosa_samantha Rh2AG210900 Rh2AG211200 Rh2AG211500 Rh2BG221200 Rh2BG221800 Rh2CG213100 Rh2CG213200 Rh2CG213600 Rh3CG277900 Rh3CG278000 Rh3CG278600 Rh3DG274600 Rh5BG188600 Rh5BG188700 Rh5BG188900 Rh5BG189100 Rh5BG189200 Rh5BG189400 Rh5CG208400 Rh5CG208500 Rh5CG208700 Rh5CG209000 Rh5CG209100 Rh5CG209400 Rh5CG209700 Rh5CG209800 Rh5CG209900 Rh5CG210000 Rh5DG190500 Rh5DG190700 Rh5DG191200 Rh5DG191500
rosa_wichuraiana Rw3G022160 Rw5G017410 Rw5G017420 Rw5G017450 Rw5G017460 Rw5G017470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 531, 1136
AarI CACCTGC 1 cut(s) 1741
Acc16I TGCGCA 1 cut(s) 1897
Acc36I ACCTGC 1 cut(s) 1741
AccB1I GGYRCC 1 cut(s) 1402
AccB7I CCANNNNNTGG 1 cut(s) 446
AccII CGCG 2 cut(s) 228, 1323
AccIII TCCGGA 2 cut(s) 1453, 1965
AciI CCGC 7 cut(s) 140, 226, 663, 1008, 1395, 1700, 1942
AclI AACGTT 1 cut(s) 1131
AclWI GGATC 4 cut(s) 21, 626, 1948, 1961
AcsI RAATTY 5 cut(s) 146, 160, 553, 1295, 1441
AcuI CTGAAG 1 cut(s) 1169
AcyI GRCGYC 1 cut(s) 1154
AfaI GTAC 3 cut(s) 588, 1142, 1376
AfiI CCNNNNNNNGG 6 cut(s) 446, 1163, 1270, 1368, 1599, 1920
AflIII ACRYGT 1 cut(s) 1650
AgsI TTSAA 6 cut(s) 151, 308, 1415, 1504, 1588, 1755
AjnI CCWGG 1 cut(s) 1576
AjuI GAANNNNNNNTTGG 2 cut(s) 1029, 1061
AleI CACNNNNGTG 1 cut(s) 1430
AloI GAACNNNNNNTCC 2 cut(s) 685, 717
AluBI AGCT 8 cut(s) 359, 686, 782, 794, 995, 1097, 1162, 1963
AluI AGCT 8 cut(s) 359, 686, 782, 794, 995, 1097, 1162, 1963
Alw21I GWGCWC 2 cut(s) 1869, 1965
Alw26I GTCTC 4 cut(s) 738, 1162, 1745, 1929
AlwI GGATC 4 cut(s) 21, 626, 1948, 1961
AlwNI CAGNNNCTG 1 cut(s) 362
Aor13HI TCCGGA 2 cut(s) 1453, 1965
AoxI GGCC 1 cut(s) 1601
ApoI RAATTY 5 cut(s) 146, 160, 553, 1295, 1441
AseI ATTAAT 1 cut(s) 336
AspA2I CCTAGG 1 cut(s) 1265
AspLEI GCGC 3 cut(s) 662, 1323, 1898
AspS9I GGNCC 4 cut(s) 329, 1350, 1386, 1497
AsuHPI GGTGA 6 cut(s) 56, 89, 395, 663, 1130, 1417
AvaII GGWCC 4 cut(s) 329, 1350, 1386, 1497
AvrII CCTAGG 1 cut(s) 1265
BaeGI GKGCMC 1 cut(s) 1023
BamHI GGATCC 1 cut(s) 1953
BanI GGYRCC 1 cut(s) 1402
BanII GRGCYC 2 cut(s) 701, 1965
BbsI GAAGAC 3 cut(s) 330, 1157, 1620
Bbv12I GWGCWC 2 cut(s) 1869, 1965
BbvCI CCTCAGC 3 cut(s) 363, 426, 468
BccI CCATC 7 cut(s) 385, 440, 491, 509, 1327, 1574, 1759
BceAI ACGGC 2 cut(s) 1094, 1296
BciT130I CCWGG 1 cut(s) 1578
BciVI GTATCC 1 cut(s) 559
BcoDI GTCTC 4 cut(s) 738, 1162, 1745, 1929
BfaI CTAG 2 cut(s) 683, 1266
BfoI RGCGCY 1 cut(s) 663
BfuAI ACCTGC 1 cut(s) 1741
BfuI GTATCC 1 cut(s) 559
BglI GCCNNNNNGGC 1 cut(s) 1793
BlnI CCTAGG 1 cut(s) 1265
Bme1390I CCNGG 1 cut(s) 1578
Bme18I GGWCC 4 cut(s) 329, 1350, 1386, 1497
BmgT120I GGNCC 4 cut(s) 329, 1350, 1386, 1497
BmiI GGNNCC 4 cut(s) 1404, 1498, 1709, 1955
BmrFI CCNGG 1 cut(s) 1578
BmsI GCATC 2 cut(s) 834, 1219
BpiI GAAGAC 3 cut(s) 330, 1157, 1620
BplI GAGNNNNNCTC 2 cut(s) 722, 754
BpmI CTGGAG 1 cut(s) 1599
Bpu10I CCTNAGC 4 cut(s) 363, 426, 468, 1158
Bsa29I ATCGAT 1 cut(s) 86
BsaBI GATNNNNATC 2 cut(s) 1247, 1952
BsaHI GRCGYC 1 cut(s) 1154
BsaI GGTCTC 1 cut(s) 1929
BsaJI CCNNGG 4 cut(s) 200, 820, 1265, 1362
BsaWI WCCGGW 2 cut(s) 1453, 1965
BsaXI ACNNNNNCTCC 2 cut(s) 685, 715
Bsc4I CCNNNNNNNGG 6 cut(s) 446, 1163, 1270, 1368, 1599, 1920
Bse118I RCCGGY 1 cut(s) 1603
Bse1I ACTGG 2 cut(s) 440, 1797
Bse3DI GCAATG 5 cut(s) 135, 285, 572, 708, 1539
Bse8I GATNNNNATC 2 cut(s) 1247, 1952
BseAI TCCGGA 2 cut(s) 1453, 1965
BseBI CCWGG 1 cut(s) 1578
BseCI ATCGAT 1 cut(s) 86
BseDI CCNNGG 4 cut(s) 200, 820, 1265, 1362
BseGI GGATG 4 cut(s) 187, 266, 1055, 1770
BseJI GATNNNNATC 2 cut(s) 1247, 1952
BseLI CCNNNNNNNGG 6 cut(s) 446, 1163, 1270, 1368, 1599, 1920
BseMI GCAATG 5 cut(s) 135, 285, 572, 708, 1539
BseMII CTCAG 5 cut(s) 354, 417, 459, 629, 1683
BseNI ACTGG 2 cut(s) 440, 1797
BseRI GAGGAG 2 cut(s) 225, 356
BseSI GKGCMC 1 cut(s) 1023
BseYI CCCAGC 1 cut(s) 1397
Bsh1236I CGCG 2 cut(s) 228, 1323
BshFI GGCC 1 cut(s) 1603
BshNI GGYRCC 1 cut(s) 1402
BshVI ATCGAT 1 cut(s) 86
BsiHKAI GWGCWC 2 cut(s) 1869, 1965
BsiSI CCGG 3 cut(s) 1454, 1604, 1966
BslFI GGGAC 3 cut(s) 224, 778, 1510
BslI CCNNNNNNNGG 6 cut(s) 446, 1163, 1270, 1368, 1599, 1920
BsmAI GTCTC 4 cut(s) 738, 1162, 1745, 1929
BsmFI GGGAC 3 cut(s) 224, 778, 1510
BsnI GGCC 1 cut(s) 1603
Bso31I GGTCTC 1 cut(s) 1929
Bsp1286I GDGCHC 4 cut(s) 701, 1023, 1869, 1965
Bsp13I TCCGGA 2 cut(s) 1453, 1965
Bsp143I GATC 8 cut(s) 13, 46, 91, 416, 458, 488, 631, 1953
BspACI CCGC 7 cut(s) 140, 226, 663, 1008, 1395, 1700, 1942
BspANI GGCC 1 cut(s) 1603
BspCNI CTCAG 5 cut(s) 355, 418, 460, 628, 1682
BspDI ATCGAT 1 cut(s) 86
BspEI TCCGGA 2 cut(s) 1453, 1965
BspFNI CGCG 2 cut(s) 228, 1323
BspHI TCATGA 1 cut(s) 853
BspLI GGNNCC 4 cut(s) 1404, 1498, 1709, 1955
BspMI ACCTGC 1 cut(s) 1741
BspPI GGATC 4 cut(s) 21, 626, 1948, 1961
BspT107I GGYRCC 1 cut(s) 1402
BspTNI GGTCTC 1 cut(s) 1929
BsrDI GCAATG 5 cut(s) 135, 285, 572, 708, 1539
BsrFI RCCGGY 1 cut(s) 1603
BsrI ACTGG 2 cut(s) 440, 1797
BssAI RCCGGY 1 cut(s) 1603
BssECI CCNNGG 4 cut(s) 200, 820, 1265, 1362
BssMI GATC 8 cut(s) 13, 46, 91, 416, 458, 488, 631, 1953
BssNI GRCGYC 1 cut(s) 1154
BssT1I CCWWGG 2 cut(s) 820, 1265
Bst2UI CCWGG 1 cut(s) 1578
Bst4CI ACNGT 4 cut(s) 204, 1306, 1549, 1707
Bst6I CTCTTC 1 cut(s) 1032
BstACI GRCGYC 1 cut(s) 1154
BstAPI GCANNNNNTGC 2 cut(s) 1781, 1939
BstC8I GCNNGC 5 cut(s) 789, 1059, 1104, 1482, 1605
BstDEI CTNAG 8 cut(s) 50, 291, 363, 426, 468, 615, 1158, 1669
BstDSI CCRYGG 1 cut(s) 200
BstEII GGTNACC 1 cut(s) 917
BstF5I GGATG 4 cut(s) 187, 266, 1055, 1770
BstFNI CGCG 2 cut(s) 228, 1323
BstH2I RGCGCY 1 cut(s) 663
BstHHI GCGC 3 cut(s) 662, 1323, 1898
BstKTI GATC 8 cut(s) 16, 49, 94, 419, 461, 491, 634, 1956
BstMAI GTCTC 4 cut(s) 738, 1162, 1745, 1929
BstMBI GATC 8 cut(s) 13, 46, 91, 416, 458, 488, 631, 1953
BstMWI GCNNNNNNNGC 7 cut(s) 705, 788, 1013, 1103, 1781, 1793, 1939
BstNI CCWGG 1 cut(s) 1578
BstNSI RCATGY 4 cut(s) 581, 791, 1106, 1654
BstPI GGTNACC 1 cut(s) 917
BstSCI CCNGG 1 cut(s) 1576
BstSLI GKGCMC 1 cut(s) 1023
BstUI CGCG 2 cut(s) 228, 1323
BstV2I GAAGAC 3 cut(s) 330, 1157, 1620
BstX2I RGATCY 1 cut(s) 1953
BstXI CCANNNNNNTGG 3 cut(s) 207, 1033, 1525
BstYI RGATCY 1 cut(s) 1953
Bsu15I ATCGAT 1 cut(s) 86
BsuI GTATCC 1 cut(s) 559
BsuRI GGCC 1 cut(s) 1603
BsuTUI ATCGAT 1 cut(s) 86
BtgI CCRYGG 1 cut(s) 200
BtgZI GCGATG 1 cut(s) 988
BtsCI GGATG 4 cut(s) 187, 266, 1055, 1770
BveI ACCTGC 1 cut(s) 1741
Cac8I GCNNGC 5 cut(s) 789, 1059, 1104, 1482, 1605
CaiI CAGNNNCTG 1 cut(s) 362
CciI TCATGA 1 cut(s) 853
CfoI GCGC 3 cut(s) 662, 1323, 1898
Cfr10I RCCGGY 1 cut(s) 1603
Cfr13I GGNCC 4 cut(s) 329, 1350, 1386, 1497
ClaI ATCGAT 1 cut(s) 86
CseI GACGC 3 cut(s) 38, 1162, 1551
Csp6I GTAC 3 cut(s) 587, 1141, 1375
CviQI GTAC 3 cut(s) 587, 1141, 1375
DdeI CTNAG 8 cut(s) 50, 291, 363, 426, 468, 615, 1158, 1669
DpnI GATC 8 cut(s) 15, 48, 93, 418, 460, 490, 633, 1955
DpnII GATC 8 cut(s) 13, 46, 91, 416, 458, 488, 631, 1953
DraI TTTAAA 2 cut(s) 169, 1834
Eam1104I CTCTTC 1 cut(s) 1032
EarI CTCTTC 1 cut(s) 1032
Ecl136II GAGCTC 1 cut(s) 1963
Eco130I CCWWGG 2 cut(s) 820, 1265
Eco24I GRGCYC 2 cut(s) 701, 1965
Eco31I GGTCTC 1 cut(s) 1929
Eco32I GATATC 2 cut(s) 593, 1683
Eco47I GGWCC 4 cut(s) 329, 1350, 1386, 1497
Eco53kI GAGCTC 1 cut(s) 1963
Eco57I CTGAAG 1 cut(s) 1169
Eco91I GGTNACC 1 cut(s) 917
EcoICRI GAGCTC 1 cut(s) 1963
EcoO109I RGGNCCY 1 cut(s) 1497
EcoO65I GGTNACC 1 cut(s) 917
EcoRI GAATTC 1 cut(s) 146
EcoRII CCWGG 1 cut(s) 1576
EcoRV GATATC 2 cut(s) 593, 1683
EcoT14I CCWWGG 2 cut(s) 820, 1265
EcoT22I ATGCAT 1 cut(s) 1624
EcoT38I GRGCYC 2 cut(s) 701, 1965
ErhI CCWWGG 2 cut(s) 820, 1265
FalI AAGNNNNNCTT 2 cut(s) 1591, 1623
FaqI GGGAC 3 cut(s) 224, 778, 1510
FauI CCCGC 1 cut(s) 1935
FauNDI CATATG 1 cut(s) 1012
FokI GGATG 4 cut(s) 174, 273, 1062, 1777
FriOI GRGCYC 2 cut(s) 701, 1965
FspBI CTAG 2 cut(s) 683, 1266
FspI TGCGCA 1 cut(s) 1897
GlaI GCGC 3 cut(s) 661, 1322, 1897
GsaI CCCAGC 1 cut(s) 1401
GsuI CTGGAG 1 cut(s) 1599
HaeII RGCGCY 1 cut(s) 663
HaeIII GGCC 1 cut(s) 1603
HapII CCGG 3 cut(s) 1454, 1604, 1966
HgaI GACGC 3 cut(s) 38, 1162, 1551
HhaI GCGC 3 cut(s) 662, 1323, 1898
Hin1I GRCGYC 1 cut(s) 1154
Hin6I GCGC 3 cut(s) 660, 1321, 1896
HinP1I GCGC 3 cut(s) 660, 1321, 1896
HincII GTYRAC 2 cut(s) 1078, 1257
HindII GTYRAC 2 cut(s) 1078, 1257
HindIII AAGCTT 1 cut(s) 1160
HinfI GANTC 4 cut(s) 668, 731, 889, 1448
HpaII CCGG 3 cut(s) 1454, 1604, 1966
HphI GGTGA 6 cut(s) 56, 89, 395, 663, 1130, 1417
Hpy166II GTNNAC 4 cut(s) 888, 1078, 1257, 1437
Hpy188I TCNGA 8 cut(s) 105, 458, 509, 545, 559, 742, 1149, 1631
Hpy188III TCNNGA 6 cut(s) 305, 599, 635, 854, 1454, 1966
Hpy8I GTNNAC 4 cut(s) 888, 1078, 1257, 1437
Hpy99I CGWCG 2 cut(s) 1115, 1598
HpyAV CCTTC 4 cut(s) 762, 1187, 1593, 1669
HpyCH4III ACNGT 4 cut(s) 204, 1306, 1549, 1707
HpyCH4IV ACGT 3 cut(s) 1131, 1143, 1974
HpyF10VI GCNNNNNNNGC 7 cut(s) 705, 788, 1013, 1103, 1781, 1793, 1939
HpyF3I CTNAG 8 cut(s) 50, 291, 363, 426, 468, 615, 1158, 1669
HpySE526I ACGT 3 cut(s) 1131, 1143, 1974
Hsp92I GRCGYC 1 cut(s) 1154
HspAI GCGC 3 cut(s) 660, 1321, 1896
Kpn2I TCCGGA 2 cut(s) 1453, 1965
KroI GCCGGC 1 cut(s) 1603
KroNI GCCGGC 1 cut(s) 1605
Kzo9I GATC 8 cut(s) 13, 46, 91, 416, 458, 488, 631, 1953
LmnI GCTCC 2 cut(s) 1702, 1968
LweI GCATC 2 cut(s) 834, 1219
MaeI CTAG 2 cut(s) 683, 1266
MaeII ACGT 3 cut(s) 1131, 1143, 1974
MaeIII GTNAC 7 cut(s) 596, 669, 775, 796, 917, 965, 1549
MalI GATC 8 cut(s) 15, 48, 93, 418, 460, 490, 633, 1955
MboI GATC 8 cut(s) 13, 46, 91, 416, 458, 488, 631, 1953
MboII GAAGA 7 cut(s) 122, 320, 335, 1049, 1162, 1471, 1625
MfeI CAATTG 1 cut(s) 1755
MflI RGATCY 1 cut(s) 1953
MhlI GDGCHC 4 cut(s) 701, 1023, 1869, 1965
MluCI AATT 9 cut(s) 66, 146, 160, 333, 553, 638, 1295, 1441, 1755
MlyI GAGTC 3 cut(s) 677, 740, 883
MmeI TCCRAC 1 cut(s) 1251
Mph1103I ATGCAT 1 cut(s) 1624
MroI TCCGGA 2 cut(s) 1453, 1965
MroNI GCCGGC 1 cut(s) 1603
MseI TTAA 9 cut(s) 168, 336, 522, 620, 924, 1301, 1647, 1833, 1907
MslI CAYNNNNRTG 1 cut(s) 1430
MspA1I CMGCKG 3 cut(s) 359, 794, 1397
MspI CCGG 3 cut(s) 1454, 1604, 1966
MspR9I CCNGG 1 cut(s) 1578
MunI CAATTG 1 cut(s) 1755
MvaI CCWGG 1 cut(s) 1578
MvnI CGCG 2 cut(s) 228, 1323
MwoI GCNNNNNNNGC 7 cut(s) 705, 788, 1013, 1103, 1781, 1793, 1939
NaeI GCCGGC 1 cut(s) 1605
NdeI CATATG 1 cut(s) 1012
NdeII GATC 8 cut(s) 13, 46, 91, 416, 458, 488, 631, 1953
NgoMIV GCCGGC 1 cut(s) 1603
NlaIV GGNNCC 4 cut(s) 1404, 1498, 1709, 1955
NmeAIII GCCGAG 1 cut(s) 1387
NmuCI GTSAC 5 cut(s) 596, 669, 775, 796, 1549
NsbI TGCGCA 1 cut(s) 1897
NsiI ATGCAT 1 cut(s) 1624
NspI RCATGY 4 cut(s) 581, 791, 1106, 1654
OliI CACNNNNGTG 1 cut(s) 1430
PaeI GCATGC 2 cut(s) 791, 1106
PagI TCATGA 1 cut(s) 853
PaqCI CACCTGC 1 cut(s) 1741
PciI ACATGT 1 cut(s) 1650
PdiI GCCGGC 1 cut(s) 1605
PfeI GAWTC 1 cut(s) 1448
PflMI CCANNNNNTGG 1 cut(s) 446
PfoI TCCNGGA 1 cut(s) 1576
PleI GAGTC 3 cut(s) 676, 739, 883
PpsI GAGTC 3 cut(s) 676, 739, 883
PpuMI RGGWCCY 1 cut(s) 1497
PscI ACATGT 1 cut(s) 1650
PshBI ATTAAT 1 cut(s) 336
PsiI TTATAA 2 cut(s) 531, 1136
Psp124BI GAGCTC 1 cut(s) 1965
Psp1406I AACGTT 1 cut(s) 1131
Psp5II RGGWCCY 1 cut(s) 1497
Psp6I CCWGG 1 cut(s) 1576
PspEI GGTNACC 1 cut(s) 917
PspFI CCCAGC 1 cut(s) 1397
PspGI CCWGG 1 cut(s) 1576
PspN4I GGNNCC 4 cut(s) 1404, 1498, 1709, 1955
PspPI GGNCC 4 cut(s) 329, 1350, 1386, 1497
PspPPI RGGWCCY 1 cut(s) 1497
PstNI CAGNNNCTG 1 cut(s) 362
PsuI RGATCY 1 cut(s) 1953
PvuII CAGCTG 2 cut(s) 359, 794
RsaI GTAC 3 cut(s) 588, 1142, 1376
RsaNI GTAC 3 cut(s) 587, 1141, 1375
RseI CAYNNNNRTG 1 cut(s) 1430
SacI GAGCTC 1 cut(s) 1965
SaqAI TTAA 9 cut(s) 168, 336, 522, 620, 924, 1301, 1647, 1833, 1907
Sau3AI GATC 8 cut(s) 13, 46, 91, 416, 458, 488, 631, 1953
Sau96I GGNCC 4 cut(s) 329, 1350, 1386, 1497
SchI GAGTC 3 cut(s) 677, 740, 883
ScrFI CCNGG 1 cut(s) 1578
SduI GDGCHC 4 cut(s) 701, 1023, 1869, 1965
SfaNI GCATC 2 cut(s) 834, 1219
SinI GGWCC 4 cut(s) 329, 1350, 1386, 1497
SmiMI CAYNNNNRTG 1 cut(s) 1430
SphI GCATGC 2 cut(s) 791, 1106
Sse9I AATT 9 cut(s) 66, 146, 160, 333, 553, 638, 1295, 1441, 1755
SsiI CCGC 7 cut(s) 140, 226, 663, 1008, 1395, 1700, 1942
SspI AATATT 3 cut(s) 1032, 1838, 1878
SspMI CTAG 2 cut(s) 683, 1266
SstI GAGCTC 1 cut(s) 1965
StyD4I CCNGG 1 cut(s) 1576
StyI CCWWGG 2 cut(s) 820, 1265
TaaI ACNGT 4 cut(s) 204, 1306, 1549, 1707
TaiI ACGT 3 cut(s) 1134, 1146, 1977
TaqI TCGA 1 cut(s) 86
TaqII GACCGA 1 cut(s) 1859
TasI AATT 9 cut(s) 66, 146, 160, 333, 553, 638, 1295, 1441, 1755
TauI GCSGC 3 cut(s) 143, 665, 1010
TfiI GAWTC 1 cut(s) 1448
Tru1I TTAA 9 cut(s) 168, 336, 522, 620, 924, 1301, 1647, 1833, 1907
Tru9I TTAA 9 cut(s) 168, 336, 522, 620, 924, 1301, 1647, 1833, 1907
TseFI GTSAC 5 cut(s) 596, 669, 775, 796, 1549
Tsp45I GTSAC 5 cut(s) 596, 669, 775, 796, 1549
TspDTI ATGAA 9 cut(s) 173, 173, 271, 282, 311, 563, 638, 870, 1836
TspGWI ACGGA 3 cut(s) 342, 1611, 1946
Van91I CCANNNNNTGG 1 cut(s) 446
VpaK11BI GGWCC 4 cut(s) 329, 1350, 1386, 1497
VspI ATTAAT 1 cut(s) 336
XapI RAATTY 5 cut(s) 146, 160, 553, 1295, 1441
XceI RCATGY 4 cut(s) 581, 791, 1106, 1654
XmaJI CCTAGG 1 cut(s) 1265
XspI CTAG 2 cut(s) 683, 1266
Zsp2I ATGCAT 1 cut(s) 1624
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.