Rroxscaffold_1G00052280

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000319
Physical Location & Seq
Reverse (-)
73007294 .. 73009613
2320 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00052280.1

Sequence Viewer

Length: 1749 bp
ATGGATCCTTACCTGTATGAGGCGGCGACGCTCGGAGATGTCAGCTTCTTGAGAAGAATCAGAGACGGTGACGTATTACTAAACCACGATCTTCTCCTTCAGAAAACGCCTAAAGACAACAACATTCTACACATCGCCGCCGAATTCAAACACAATGAATTTTTCAGACAAGTCCCGAATCACTATTCTCCAGCTCTGTTTTGGGCGGCCAACAAAAAGGGCGACACTCCTCTGCACGTGGCCGCTAGAGTAGGCTGTGATGAAATAGTCGAGTTCCTTATCGATCAGGCGAAAGCGCTGCACATAAGAGGAGCTGATGAGGAAAGCTGTCATCGAAAGCCGCTACTTCGGATGACGAATTTAGAAATGGATACGGCTCTGCATGTGGCGGTGCGGTACGGTCATCTTGGAGTGGTGGTTATGTTAATGGAAGCCGATCCAGAACTGTGTTGTTTGACTAACAGGGCAGATGAATCGGTTTTATTCTTGGCTGCTAGGAAGGGGTCCGCAGAGATTGCTCTTTATCTGTTGAACGAGTCTCCGGTGTGTCCTTGTTTTCGAGGGACTAATGGTGTGACGGCTTTGCACGCCGCTGTAACTCGCAGCAACCTCACCAGCAAAGGCATTGTGAGGACTATGGTGTCCAAAAATCCTGATATGATTAAAAACGTCGATGCACTTGGCTGGACACCGTTACACTATGCAGCATTTAGAGGGAACCTTGAAGCGACTAGAGTCCTGATGCAATGTGATAGTTCTGCATCTTACATCTTAGACAACTCTGGAATGTCAGCTCTCCATGTGGCAGCCCATGCCGGCCACACCAAGATAATGGAAGAACTGATTCGGTGGCGGCCTGATATTTGTGATCTGCTGAATGACAAAGGCCAAACGGCTTTACATGCGGCAGTATTAGGAGAACGAGTTAATGTTGTGGAGTACATATTGAAGACGCCTAAGCTTGCAGCGATTATAAACGAACCAGATAAAGATGGAAACACTCCTTTGCACTTGGCTGCCCTTCAGCAAAATGATAAAATCATCAAAGTTTTGTCAGGCGATCGTAGAGTAGACATGATTGCTATTAATAAGGATTTCTCGAAGCCCATTGACATGTTTCTTGGTGACAATATTGGGGAACAGGAAACAATTCGCAGTGGTATGGTTTTGCACAACCTGGGGTGCTCCGTTGGTGTGCCATTTTTCCAACAACAAATCAGTCGTGACTTGAACAAATTGGAACCACCGGACAAGGATACAGACAAGACCAGAGAAAACCAACAGCAAGCTCCTCGCGATGATAATGCCTTGAAAAGAAATGACACCAAACTACTTGTAGCAACGCTGATTGCAACCGTCACATTTGCAGCTTCTTTCACCAATGTGCCTGGAGGATTTAAAGACGATGGAATGCCTGTTTTATATGACAAGGCGCCTTTCAAAGTGTTTCAGTTCTTCAATGCAGTGTCCTTCTACATCTCAATTCTTGCAATCTATAACGAATCAACTCCGATAACTGTGTTATCCATCCATCTACCCACTCCATCAATTCTCATTCAGTATTCAATTGGAGGAATGGTGGTTGCATTTTTTTCGGGCACGTTAGCGGTGCAGCCAAGACACCATCATCCCTGTGCTGAAGTCTCTGATTCAAATAAGCAGGGGAAAGAGGATTCACTGGCTCCGAAACCGTCACATGGATCTATTCTTATTTTTCTTACAGTTGCTTGTGGATTTGTGGAAGCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

582

Amino Acids

64.24

Weight (kDa)

6.19

Isoelectric Point (pI)

36.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 28 - 96 3.5e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 127 - 217 4.1e-09 Ankyrin repeats (3 copies)
Ank_4 PF13637 195 - 247 3.9e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 208 - 285 4.1e-12 Ankyrin repeats (3 copies)
Ank_4 PF13637 266 - 315 4.2e-07 Ankyrin repeats (many copies)
Ank_2 PF12796 290 - 352 2.3e-10 Ankyrin repeats (3 copies)
PGG PF13962 438 - 536 3.1e-18 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000319)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18590 FvH4_1g18590 FvH4_3g16140 FvH4_3g16141 FvH4_3g16160
malus_domestica MD02G1193600.v1.1 MD04G1020900.v1.1 MD04G1021000.v1.1 MD05G1212100.v1.1 MD05G1212300.v1.1 MD05G1213100.v1.1 MD05G1213400.v1.1 MD10G1197300.v1.1
prunus_persica Prupe.4G144500_v2.0.a1 Prupe.4G144600_v2.0.a1 Prupe.4G144800_v2.0.a1 Prupe.4G144900_v2.0.a1 Prupe.4G145100_v2.0.a1 Prupe.4G145300_v2.0.a1
pyrus_communis pycom02g15730 pycom02g15740 pycom05g19670 pycom05g19680 pycom10g17020 pycom11g27250
rosa_chinensis RchiOBHm_Chr2g0109301 RchiOBHm_Chr2g0109321 RchiOBHm_Chr2g0109341 RchiOBHm_Chr2g0109381 RchiOBHm_Chr3g0482301 RchiOBHm_Chr5g0027111 RchiOBHm_Chr5g0027121 RchiOBHm_Chr5g0027141 RchiOBHm_Chr5g0027181 RchiOBHm_Chr5g0027241
rosa_laevigata RLG00000017731 RLG00000017732 RLG00000032990 RLG00000032992 RLG00000032993 RLG00000032995 RLG00000032997 RLG00000033002
rosa_multiflora Rmu_sc0000135.1_g000002 Rmu_sc0000332.1_g000010 Rmu_sc0000882.1_g000028 Rmu_sc0000882.1_g000032 Rmu_sc0000882.1_g000033 Rmu_sc0000882.1_g000039 Rmu_sc0000882.1_g000043 Rmu_sc0000882.1_g000046 Rmu_sc0006065.1_g000003 Rmu_sc0006065.1_g000012 Rmu_sc0006065.1_g000018 Rmu_sc0006065.1_g000019 Rmu_sc0006065.1_g000022 Rmu_sc0007497.1_g000002 Rmu_sc0013610.1_g000011 Rmu_sc0015338.1_g000006 Rmu_ssc0000357.1_g000035
rosa_roxburghii Rroxscaffold_1G00052250 Rroxscaffold_1G00052280 Rroxscaffold_1G00052290 Rroxscaffold_1G00052310 Rroxscaffold_1G00052330 Rroxscaffold_1G00052360 Rroxscaffold_1G00052380 Rroxscaffold_1G00052390 Rroxscaffold_2G00134310 Rroxscaffold_2G00134330
rosa_rugosa Rorug02G0159400 Rorug05G0097300 Rorug05G0097500 Rorug05G0097600 Rorug05G0097700 Rorug05G0097700 Rorug05G0097700 Rorug05G0122900
rosa_samantha Rh2AG210900 Rh2AG211200 Rh2AG211500 Rh2BG221200 Rh2BG221800 Rh2CG213100 Rh2CG213200 Rh2CG213600 Rh3CG277900 Rh3CG278000 Rh3CG278600 Rh3DG274600 Rh5BG188600 Rh5BG188700 Rh5BG188900 Rh5BG189100 Rh5BG189200 Rh5BG189400 Rh5CG208400 Rh5CG208500 Rh5CG208700 Rh5CG209000 Rh5CG209100 Rh5CG209400 Rh5CG209700 Rh5CG209800 Rh5CG209900 Rh5CG210000 Rh5DG190500 Rh5DG190700 Rh5DG191200 Rh5DG191500
rosa_wichuraiana Rw3G022160 Rw5G017410 Rw5G017420 Rw5G017450 Rw5G017460 Rw5G017470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 974
AasI GACNNNNNNGTC 1 cut(s) 640
AccB1I GGYRCC 1 cut(s) 1432
AccI GTMKAC 1 cut(s) 1071
AccII CGCG 1 cut(s) 1296
AclWI GGATC 3 cut(s) 12, 431, 1708
AcoI YGGCCR 3 cut(s) 207, 240, 817
AcsI RAATTY 3 cut(s) 143, 158, 358
AcuI CTGAAG 3 cut(s) 83, 1007, 1659
AcvI CACGTG 1 cut(s) 238
AcyI GRCGYC 2 cut(s) 953, 1433
AfaI GTAC 2 cut(s) 398, 941
AfeI AGCGCT 1 cut(s) 297
AfiI CCNNNNNNNGG 2 cut(s) 19, 1697
AflIII ACRYGT 1 cut(s) 1113
AjnI CCWGG 2 cut(s) 1176, 1387
AleI CACNNNNGTG 1 cut(s) 1382
AluBI AGCT 8 cut(s) 45, 194, 314, 327, 794, 961, 1289, 1370
AluI AGCT 8 cut(s) 45, 194, 314, 327, 794, 961, 1289, 1370
Alw21I GWGCWC 1 cut(s) 1187
Alw26I GTCTC 3 cut(s) 57, 543, 1648
AlwI GGATC 3 cut(s) 12, 431, 1708
Aor51HI AGCGCT 1 cut(s) 297
AoxI GGCC 5 cut(s) 207, 240, 817, 854, 886
ApeKI GCWGC 9 cut(s) 298, 491, 603, 704, 806, 965, 1016, 1367, 1612
ApoI RAATTY 3 cut(s) 143, 158, 358
AseI ATTAAT 1 cut(s) 1086
Asp700I GAANNNNTTC 2 cut(s) 843, 1149
AspLEI GCGC 2 cut(s) 298, 1435
AspS9I GGNCC 1 cut(s) 504
AsuHPI GGTGA 4 cut(s) 80, 604, 1136, 1369
AvaII GGWCC 1 cut(s) 504
BaeGI GKGCMC 1 cut(s) 1601
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 1 cut(s) 1432
BbrPI CACGTG 1 cut(s) 238
BbsI GAAGAC 1 cut(s) 956
Bbv12I GWGCWC 1 cut(s) 1187
BbvI GCAGC 9 cut(s) 285, 478, 615, 716, 818, 977, 1003, 1379, 1624
BccI CCATC 6 cut(s) 986, 1400, 1535, 1539, 1552, 1632
BceAI ACGGC 3 cut(s) 390, 594, 909
BciT130I CCWGG 2 cut(s) 1178, 1389
BciVI GTATCC 2 cut(s) 364, 1249
BcoDI GTCTC 3 cut(s) 57, 543, 1648
BfaI CTAG 4 cut(s) 246, 495, 732, 1747
BfoI RGCGCY 2 cut(s) 299, 1436
BfuI GTATCC 2 cut(s) 364, 1249
Bme1390I CCNGG 2 cut(s) 1178, 1389
Bme18I GGWCC 1 cut(s) 504
BmgT120I GGNCC 1 cut(s) 504
BmiI GGNNCC 6 cut(s) 6, 505, 719, 1242, 1434, 1683
BmrFI CCNGG 2 cut(s) 1178, 1389
BmsI GCATC 3 cut(s) 664, 732, 770
BoxI GACNNNNGTC 1 cut(s) 734
BpiI GAAGAC 1 cut(s) 956
BpmI CTGGAG 2 cut(s) 174, 1410
Bpu10I CCTNAGC 1 cut(s) 957
BpuEI CTTGAG 1 cut(s) 70
Bsa29I ATCGAT 1 cut(s) 282
BsaAI YACGTR 1 cut(s) 238
BsaHI GRCGYC 2 cut(s) 953, 1433
BsaJI CCNNGG 1 cut(s) 1177
BsaWI WCCGGW 2 cut(s) 541, 1246
BsaXI ACNNNNNCTCC 6 cut(s) 402, 432, 909, 939, 1563, 1593
Bsc4I CCNNNNNNNGG 2 cut(s) 19, 1697
Bse118I RCCGGY 1 cut(s) 815
Bse1I ACTGG 1 cut(s) 1683
Bse3DI GCAATG 1 cut(s) 752
BseBI CCWGG 2 cut(s) 1178, 1389
BseCI ATCGAT 1 cut(s) 282
BseDI CCNNGG 1 cut(s) 1177
BseGI GGATG 3 cut(s) 357, 1527, 1627
BseLI CCNNNNNNNGG 2 cut(s) 19, 1697
BseMI GCAATG 1 cut(s) 752
BseNI ACTGG 1 cut(s) 1683
BseRI GAGGAG 3 cut(s) 219, 324, 1281
BseSI GKGCMC 1 cut(s) 1601
BseXI GCAGC 9 cut(s) 285, 478, 615, 716, 818, 977, 1003, 1379, 1624
BsgI GTGCAG 3 cut(s) 218, 284, 1631
Bsh1236I CGCG 1 cut(s) 1296
Bsh1285I CGRYCG 1 cut(s) 1063
BshFI GGCC 5 cut(s) 209, 242, 819, 856, 888
BshNI GGYRCC 1 cut(s) 1432
BshVI ATCGAT 1 cut(s) 282
BsiEI CGRYCG 1 cut(s) 1063
BsiHKAI GWGCWC 1 cut(s) 1187
BsiSI CCGG 3 cut(s) 542, 816, 1247
BslFI GGGAC 2 cut(s) 158, 577
BslI CCNNNNNNNGG 2 cut(s) 19, 1697
BsmAI GTCTC 3 cut(s) 57, 543, 1648
BsmBI CGTCTC 1 cut(s) 57
BsmFI GGGAC 2 cut(s) 158, 577
BsmI GAATGC 1 cut(s) 1416
BsnI GGCC 5 cut(s) 209, 242, 819, 856, 888
Bsp1286I GDGCHC 2 cut(s) 1187, 1601
Bsp143I GATC 7 cut(s) 4, 88, 283, 436, 868, 1060, 1700
Bsp68I TCGCGA 1 cut(s) 1296
BspANI GGCC 5 cut(s) 209, 242, 819, 856, 888
BspDI ATCGAT 1 cut(s) 282
BspFNI CGCG 1 cut(s) 1296
BspLI GGNNCC 6 cut(s) 6, 505, 719, 1242, 1434, 1683
BspPI GGATC 3 cut(s) 12, 431, 1708
BspT107I GGYRCC 1 cut(s) 1432
BsrDI GCAATG 1 cut(s) 752
BsrFI RCCGGY 1 cut(s) 815
BsrI ACTGG 1 cut(s) 1683
BssAI RCCGGY 1 cut(s) 815
BssECI CCNNGG 1 cut(s) 1177
BssMI GATC 7 cut(s) 4, 88, 283, 436, 868, 1060, 1700
BssNI GRCGYC 2 cut(s) 953, 1433
Bst2UI CCWGG 2 cut(s) 1178, 1389
Bst4CI ACNGT 8 cut(s) 68, 401, 447, 693, 1357, 1519, 1692, 1723
BstACI GRCGYC 2 cut(s) 953, 1433
BstAPI GCANNNNNTGC 2 cut(s) 515, 812
BstBAI YACGTR 1 cut(s) 238
BstC8I GCNNGC 4 cut(s) 588, 817, 963, 1287
BstDEI CTNAG 2 cut(s) 772, 957
BstENI CCTNNNNNAGG 1 cut(s) 17
BstF5I GGATG 3 cut(s) 357, 1527, 1627
BstFNI CGCG 1 cut(s) 1296
BstH2I RGCGCY 2 cut(s) 299, 1436
BstHHI GCGC 2 cut(s) 298, 1435
BstKTI GATC 7 cut(s) 7, 91, 286, 439, 871, 1063, 1703
BstMAI GTCTC 3 cut(s) 57, 543, 1648
BstMBI GATC 7 cut(s) 4, 88, 283, 436, 868, 1060, 1700
BstMCI CGRYCG 1 cut(s) 1063
BstMWI GCNNNNNNNGC 4 cut(s) 515, 587, 812, 902
BstNI CCWGG 2 cut(s) 1178, 1389
BstNSI RCATGY 3 cut(s) 386, 905, 1117
BstPAI GACNNNNGTC 1 cut(s) 734
BstSCI CCNGG 2 cut(s) 1176, 1387
BstSLI GKGCMC 1 cut(s) 1601
BstUI CGCG 1 cut(s) 1296
BstV1I GCAGC 9 cut(s) 285, 478, 615, 716, 818, 977, 1003, 1379, 1624
BstV2I GAAGAC 1 cut(s) 956
BstX2I RGATCY 2 cut(s) 4, 1700
BstXI CCANNNNNNTGG 1 cut(s) 832
BstYI RGATCY 2 cut(s) 4, 1700
Bsu15I ATCGAT 1 cut(s) 282
BsuI GTATCC 2 cut(s) 364, 1249
BsuRI GGCC 5 cut(s) 209, 242, 819, 856, 888
BsuTUI ATCGAT 1 cut(s) 282
BtgZI GCGATG 2 cut(s) 118, 1311
BtsCI GGATG 3 cut(s) 357, 1527, 1627
BtsI GCAGTG 2 cut(s) 1162, 1470
BtsIMutI CAGTG 3 cut(s) 1162, 1470, 1676
BtuMI TCGCGA 1 cut(s) 1296
Cac8I GCNNGC 4 cut(s) 588, 817, 963, 1287
CfoI GCGC 2 cut(s) 298, 1435
Cfr10I RCCGGY 1 cut(s) 815
Cfr13I GGNCC 1 cut(s) 504
ClaI ATCGAT 1 cut(s) 282
CseI GACGC 2 cut(s) 37, 961
Csp6I GTAC 2 cut(s) 397, 940
CviAII CATG 7 cut(s) 383, 800, 812, 902, 1075, 1114, 1697
CviQI GTAC 2 cut(s) 397, 940
DdeI CTNAG 2 cut(s) 772, 957
DinI GGCGCC 1 cut(s) 1434
DpnI GATC 7 cut(s) 6, 90, 285, 438, 870, 1062, 1702
DpnII GATC 7 cut(s) 4, 88, 283, 436, 868, 1060, 1700
DraI TTTAAA 1 cut(s) 1399
DrdI GACNNNNNNGTC 1 cut(s) 640
DseDI GACNNNNNNGTC 1 cut(s) 640
EaeI YGGCCR 3 cut(s) 207, 240, 817
Eco47I GGWCC 1 cut(s) 504
Eco47III AGCGCT 1 cut(s) 297
Eco57I CTGAAG 3 cut(s) 83, 1007, 1659
Eco72I CACGTG 1 cut(s) 238
EcoNI CCTNNNNNAGG 1 cut(s) 17
EcoRI GAATTC 1 cut(s) 143
EcoRII CCWGG 2 cut(s) 1176, 1387
EgeI GGCGCC 1 cut(s) 1434
EheI GGCGCC 1 cut(s) 1434
Esp3I CGTCTC 1 cut(s) 57
FaeI CATG 7 cut(s) 386, 803, 815, 905, 1078, 1117, 1700
FaqI GGGAC 2 cut(s) 158, 577
FatI CATG 7 cut(s) 382, 799, 811, 901, 1074, 1113, 1696
FblI GTMKAC 1 cut(s) 1071
FokI GGATG 3 cut(s) 364, 1514, 1614
FspBI CTAG 4 cut(s) 246, 495, 732, 1747
GlaI GCGC 2 cut(s) 297, 1434
GsuI CTGGAG 2 cut(s) 174, 1410
HaeII RGCGCY 2 cut(s) 299, 1436
HaeIII GGCC 5 cut(s) 209, 242, 819, 856, 888
HapII CCGG 3 cut(s) 542, 816, 1247
HgaI GACGC 2 cut(s) 37, 961
HhaI GCGC 2 cut(s) 298, 1435
Hin1I GRCGYC 2 cut(s) 953, 1433
Hin1II CATG 7 cut(s) 386, 803, 815, 905, 1078, 1117, 1700
Hin6I GCGC 2 cut(s) 296, 1433
HinP1I GCGC 2 cut(s) 296, 1433
HindIII AAGCTT 1 cut(s) 959
HinfI GANTC 9 cut(s) 57, 178, 473, 536, 735, 844, 1502, 1649, 1673
HpaII CCGG 3 cut(s) 542, 816, 1247
HphI GGTGA 4 cut(s) 80, 604, 1136, 1369
Hpy166II GTNNAC 1 cut(s) 1072
Hpy188I TCNGA 8 cut(s) 35, 62, 102, 167, 351, 1512, 1648, 1686
Hpy188III TCNNGA 9 cut(s) 49, 175, 440, 653, 739, 783, 1099, 1223, 1295
Hpy8I GTNNAC 1 cut(s) 1072
Hpy99I CGWCG 2 cut(s) 31, 674
HpyAV CCTTC 4 cut(s) 107, 493, 1031, 1480
HpyCH4III ACNGT 8 cut(s) 68, 401, 447, 693, 1357, 1519, 1692, 1723
HpyCH4IV ACGT 4 cut(s) 72, 237, 669, 1601
HpyF10VI GCNNNNNNNGC 4 cut(s) 515, 587, 812, 902
HpyF3I CTNAG 2 cut(s) 772, 957
HpySE526I ACGT 4 cut(s) 72, 237, 669, 1601
Hsp92I GRCGYC 2 cut(s) 953, 1433
Hsp92II CATG 7 cut(s) 386, 803, 815, 905, 1078, 1117, 1700
HspAI GCGC 2 cut(s) 296, 1433
KasI GGCGCC 1 cut(s) 1432
KroI GCCGGC 1 cut(s) 815
KroNI GCCGGC 1 cut(s) 817
Kzo9I GATC 7 cut(s) 4, 88, 283, 436, 868, 1060, 1700
LmnI GCTCC 4 cut(s) 311, 1190, 1294, 1687
Lsp1109I GCAGC 9 cut(s) 285, 478, 615, 716, 818, 977, 1003, 1379, 1624
LweI GCATC 3 cut(s) 664, 732, 770
MaeI CTAG 4 cut(s) 246, 495, 732, 1747
MaeII ACGT 4 cut(s) 72, 237, 669, 1601
MaeIII GTNAC 8 cut(s) 68, 574, 595, 693, 1124, 1223, 1357, 1692
MalI GATC 7 cut(s) 6, 90, 285, 438, 870, 1062, 1702
MboI GATC 7 cut(s) 4, 88, 283, 436, 868, 1060, 1700
MboII GAAGA 5 cut(s) 66, 83, 848, 961, 1447
MfeI CAATTG 1 cut(s) 1566
MflI RGATCY 2 cut(s) 4, 1700
MhlI GDGCHC 2 cut(s) 1187, 1601
MluCI AATT 8 cut(s) 143, 158, 358, 1149, 1235, 1482, 1548, 1566
Mly113I GGCGCC 1 cut(s) 1433
MlyI GAGTC 2 cut(s) 545, 744
MmeI TCCRAC 1 cut(s) 1231
MroNI GCCGGC 1 cut(s) 815
MroXI GAANNNNTTC 2 cut(s) 843, 1149
MseI TTAA 5 cut(s) 425, 663, 927, 1086, 1398
MslI CAYNNNNRTG 3 cut(s) 1112, 1382, 1632
MspA1I CMGCKG 1 cut(s) 593
MspI CCGG 3 cut(s) 542, 816, 1247
MspR9I CCNGG 2 cut(s) 1178, 1389
MunI CAATTG 1 cut(s) 1566
Mva1269I GAATGC 1 cut(s) 1416
MvaI CCWGG 2 cut(s) 1178, 1389
MvnI CGCG 1 cut(s) 1296
MwoI GCNNNNNNNGC 4 cut(s) 515, 587, 812, 902
NaeI GCCGGC 1 cut(s) 817
NarI GGCGCC 1 cut(s) 1433
NdeII GATC 7 cut(s) 4, 88, 283, 436, 868, 1060, 1700
NgoMIV GCCGGC 1 cut(s) 815
NlaIII CATG 7 cut(s) 386, 803, 815, 905, 1078, 1117, 1700
NlaIV GGNNCC 6 cut(s) 6, 505, 719, 1242, 1434, 1683
NmuCI GTSAC 6 cut(s) 68, 574, 1124, 1223, 1357, 1692
NruI TCGCGA 1 cut(s) 1296
NspI RCATGY 3 cut(s) 386, 905, 1117
OliI CACNNNNGTG 1 cut(s) 1382
PciI ACATGT 1 cut(s) 1113
PctI GAATGC 1 cut(s) 1416
PdiI GCCGGC 1 cut(s) 817
PdmI GAANNNNTTC 2 cut(s) 843, 1149
PfeI GAWTC 7 cut(s) 57, 178, 473, 844, 1502, 1649, 1673
Ple19I CGATCG 1 cut(s) 1063
PleI GAGTC 2 cut(s) 544, 743
PluTI GGCGCC 1 cut(s) 1436
PmaCI CACGTG 1 cut(s) 238
PmlI CACGTG 1 cut(s) 238
PpsI GAGTC 2 cut(s) 544, 743
Ppu21I YACGTR 1 cut(s) 238
PscI ACATGT 1 cut(s) 1113
PshAI GACNNNNGTC 1 cut(s) 734
PshBI ATTAAT 1 cut(s) 1086
PsiI TTATAA 1 cut(s) 974
Psp6I CCWGG 2 cut(s) 1176, 1387
PspCI CACGTG 1 cut(s) 238
PspGI CCWGG 2 cut(s) 1176, 1387
PspN4I GGNNCC 6 cut(s) 6, 505, 719, 1242, 1434, 1683
PspPI GGNCC 1 cut(s) 504
PsuI RGATCY 2 cut(s) 4, 1700
PvuI CGATCG 1 cut(s) 1063
RruI TCGCGA 1 cut(s) 1296
RsaI GTAC 2 cut(s) 398, 941
RsaNI GTAC 2 cut(s) 397, 940
RseI CAYNNNNRTG 3 cut(s) 1112, 1382, 1632
SaqAI TTAA 5 cut(s) 425, 663, 927, 1086, 1398
Sau3AI GATC 7 cut(s) 4, 88, 283, 436, 868, 1060, 1700
Sau96I GGNCC 1 cut(s) 504
SchI GAGTC 2 cut(s) 545, 744
ScrFI CCNGG 2 cut(s) 1178, 1389
SduI GDGCHC 2 cut(s) 1187, 1601
SfaNI GCATC 3 cut(s) 664, 732, 770
SfoI GGCGCC 1 cut(s) 1434
SinI GGWCC 1 cut(s) 504
SmiMI CAYNNNNRTG 3 cut(s) 1112, 1382, 1632
SmlI CTYRAG 1 cut(s) 49
SmoI CTYRAG 1 cut(s) 49
Sse9I AATT 8 cut(s) 143, 158, 358, 1149, 1235, 1482, 1548, 1566
SspDI GGCGCC 1 cut(s) 1432
SspI AATATT 1 cut(s) 1132
SspMI CTAG 4 cut(s) 246, 495, 732, 1747
StyD4I CCNGG 2 cut(s) 1176, 1387
TaaI ACNGT 8 cut(s) 68, 401, 447, 693, 1357, 1519, 1692, 1723
TaiI ACGT 4 cut(s) 75, 240, 672, 1604
TaqI TCGA 6 cut(s) 270, 282, 334, 559, 672, 1100
TasI AATT 8 cut(s) 143, 158, 358, 1149, 1235, 1482, 1548, 1566
TatI WGTACW 1 cut(s) 939
TauI GCSGC 8 cut(s) 26, 140, 209, 245, 343, 593, 856, 908
TfiI GAWTC 7 cut(s) 57, 178, 473, 844, 1502, 1649, 1673
Tru1I TTAA 5 cut(s) 425, 663, 927, 1086, 1398
Tru9I TTAA 5 cut(s) 425, 663, 927, 1086, 1398
TscAI CASTG 3 cut(s) 1162, 1470, 1683
TseFI GTSAC 6 cut(s) 68, 574, 1124, 1223, 1357, 1692
TseI GCWGC 9 cut(s) 298, 491, 603, 704, 806, 965, 1016, 1367, 1612
Tsp45I GTSAC 6 cut(s) 68, 574, 1124, 1223, 1357, 1692
TspDTI ATGAA 3 cut(s) 171, 276, 486
TspGWI ACGGA 1 cut(s) 1177
TspRI CASTG 3 cut(s) 1162, 1470, 1683
VpaK11BI GGWCC 1 cut(s) 504
VspI ATTAAT 1 cut(s) 1086
XagI CCTNNNNNAGG 1 cut(s) 17
XapI RAATTY 3 cut(s) 143, 158, 358
XceI RCATGY 3 cut(s) 386, 905, 1117
XcmI CCANNNNNNNNNTGG 1 cut(s) 198
XmiI GTMKAC 1 cut(s) 1071
XmnI GAANNNNTTC 2 cut(s) 843, 1149
XspI CTAG 4 cut(s) 246, 495, 732, 1747
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.