pycom05g19670

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
OG0000319
Physical Location & Seq
Reverse (-)
22565262 .. 22566616
1355 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g19670.2

Sequence Viewer

Length: 1182 bp
ATGGTTTCCAGAAATCCTGGGATAATCAAAGAAGTTGATGAAATAGGGTGGACTCCATTACACTACGCATCACTGAAAGGGAACCTTATAGCAGCTAAACTACTGATTCAAAATTCTAACTCTGCTTGTTACATCCCAGACAAACTTGGAATGTCAGCTCTCCACGTTGCGGCATATGCAGGGCATACCAAAATAATTGATGAGTTGATTCAACGTTGTCCTGATATTTGCAATTGTGTCACTCAGAAAGGCCAAACAGCTCTACATGCAGCAGTTTTAGGCGAAAAAATAGATGTTGTGAAGTACATTTTGAAAACGCCTAAGCTTGCGATACTTATAAACAAAGCAGATAAGGATGGAAACACTCCTTGGCATCTAGCTGCTATTCGCAAAAATAGTAAAATTGTTGCTATTTTAAGGAGAGACAGTAGGTTGAACAGAACTGCTATCAATAAAAAATTTTTGCAAGTTAGCGACATTTTGCTCGCCAATAACACGGGAAGAAAGGAAATCATAAAAAGTCGCAATGTTCGCTACCTGGGAGACATTGTCGTTCCCGTGCCATATTTTCAACAAGAAATCAAGCAGGAGTTCAAGAAATTTGAATCCCAAGAGGAGATCAGTACGTCTGAGACGCTAGTCAATACTACAAATACGAGAGAAAACTTGCAGGCTTATTCGGATCCGACCTTCAATAAAAATGATGCGAAACTTGTGGTAGCGACGGTCATTGCAACCGTTACATTTACAGCCCTTATCAACCCGCCTGGAGGGTTTAAAGAAGATGGAACATCAGTTTTAAGAGAAAAAGCAGCTTACAAAGTATTTTCGGGTTTTAACCAGCTATCCTTCGTACTCTCAGTGTTTGCGATATATAATGAATCCAGTCCGATATCTGTCCTATCCACCCATCTGCCAACACCCGCGAGTCTTATTAATTATTCCATTGCTGGAATGGTGATAGCATTTTGGGCAGCCCTGGCAGCAGTGGAACCCAAGCCACCCGGGCAAAGTATGGTTAAATATTTTTTGTATGGTGGCGACGAAACCGTTGTTTCTGATACGCTCCTGCTTATTGTTGTAATTGTAGGCGCACTAGTTGTTATCTCGGTTGCGAAGCGTCTATTTCAAATAATCATGAGGAAAAGAAGGATCCACGACTTCCAGAACCACGTAATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

394

Amino Acids

43.48

Weight (kDa)

9.44

Isoelectric Point (pI)

32.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000319)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18590 FvH4_1g18590 FvH4_3g16140 FvH4_3g16141 FvH4_3g16160
malus_domestica MD02G1193600.v1.1 MD04G1020900.v1.1 MD04G1021000.v1.1 MD05G1212100.v1.1 MD05G1212300.v1.1 MD05G1213100.v1.1 MD05G1213400.v1.1 MD10G1197300.v1.1
prunus_persica Prupe.4G144500_v2.0.a1 Prupe.4G144600_v2.0.a1 Prupe.4G144800_v2.0.a1 Prupe.4G144900_v2.0.a1 Prupe.4G145100_v2.0.a1 Prupe.4G145300_v2.0.a1
pyrus_communis pycom02g15730 pycom02g15740 pycom05g19670 pycom05g19680 pycom10g17020 pycom11g27250
rosa_chinensis RchiOBHm_Chr2g0109301 RchiOBHm_Chr2g0109321 RchiOBHm_Chr2g0109341 RchiOBHm_Chr2g0109381 RchiOBHm_Chr3g0482301 RchiOBHm_Chr5g0027111 RchiOBHm_Chr5g0027121 RchiOBHm_Chr5g0027141 RchiOBHm_Chr5g0027181 RchiOBHm_Chr5g0027241
rosa_laevigata RLG00000017731 RLG00000017732 RLG00000032990 RLG00000032992 RLG00000032993 RLG00000032995 RLG00000032997 RLG00000033002
rosa_multiflora Rmu_sc0000135.1_g000002 Rmu_sc0000332.1_g000010 Rmu_sc0000882.1_g000028 Rmu_sc0000882.1_g000032 Rmu_sc0000882.1_g000033 Rmu_sc0000882.1_g000039 Rmu_sc0000882.1_g000043 Rmu_sc0000882.1_g000046 Rmu_sc0006065.1_g000003 Rmu_sc0006065.1_g000012 Rmu_sc0006065.1_g000018 Rmu_sc0006065.1_g000019 Rmu_sc0006065.1_g000022 Rmu_sc0007497.1_g000002 Rmu_sc0013610.1_g000011 Rmu_sc0015338.1_g000006 Rmu_ssc0000357.1_g000035
rosa_roxburghii Rroxscaffold_1G00052250 Rroxscaffold_1G00052280 Rroxscaffold_1G00052290 Rroxscaffold_1G00052310 Rroxscaffold_1G00052330 Rroxscaffold_1G00052360 Rroxscaffold_1G00052380 Rroxscaffold_1G00052390 Rroxscaffold_2G00134310 Rroxscaffold_2G00134330
rosa_rugosa Rorug02G0159400 Rorug05G0097300 Rorug05G0097500 Rorug05G0097600 Rorug05G0097700 Rorug05G0097700 Rorug05G0097700 Rorug05G0122900
rosa_samantha Rh2AG210900 Rh2AG211200 Rh2AG211500 Rh2BG221200 Rh2BG221800 Rh2CG213100 Rh2CG213200 Rh2CG213600 Rh3CG277900 Rh3CG278000 Rh3CG278600 Rh3DG274600 Rh5BG188600 Rh5BG188700 Rh5BG188900 Rh5BG189100 Rh5BG189200 Rh5BG189400 Rh5CG208400 Rh5CG208500 Rh5CG208700 Rh5CG209000 Rh5CG209100 Rh5CG209400 Rh5CG209700 Rh5CG209800 Rh5CG209900 Rh5CG210000 Rh5DG190500 Rh5DG190700 Rh5DG191200 Rh5DG191500
rosa_wichuraiana Rw3G022160 Rw5G017410 Rw5G017420 Rw5G017450 Rw5G017460 Rw5G017470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 338
AccII CGCG 1 cut(s) 926
AciI CCGC 3 cut(s) 170, 764, 924
AclI AACGTT 1 cut(s) 214
AclWI GGATC 4 cut(s) 677, 690, 1147, 1160
AcsI RAATTY 3 cut(s) 112, 458, 599
AfaI GTAC 3 cut(s) 305, 625, 855
AfiI CCNNNNNNNGG 2 cut(s) 169, 770
AgsI TTSAA 9 cut(s) 110, 212, 313, 436, 572, 595, 605, 694, 1130
AhlI ACTAGT 1 cut(s) 1096
AjnI CCWGG 4 cut(s) 16, 537, 766, 978
AjuI GAANNNNNNNTTGG 2 cut(s) 352, 384
AluBI AGCT 7 cut(s) 95, 158, 260, 325, 380, 815, 844
AluI AGCT 7 cut(s) 95, 158, 260, 325, 380, 815, 844
Alw26I GTCTC 3 cut(s) 417, 537, 626
AlwI GGATC 4 cut(s) 677, 690, 1147, 1160
Ama87I CYCGRG 1 cut(s) 1004
AoxI GGCC 1 cut(s) 250
ApeKI GCWGC 6 cut(s) 92, 269, 380, 812, 974, 983
ApoI RAATTY 3 cut(s) 112, 458, 599
AseI ATTAAT 1 cut(s) 936
AspLEI GCGC 1 cut(s) 1094
AsuC2I CCSGG 2 cut(s) 1005, 1006
AsuHPI GGTGA 1 cut(s) 970
AvaI CYCGRG 1 cut(s) 1004
BamHI GGATCC 2 cut(s) 682, 1152
BbvI GCAGC 6 cut(s) 104, 281, 367, 824, 986, 995
BccI CCATC 3 cut(s) 350, 779, 918
BciT130I CCWGG 4 cut(s) 18, 539, 768, 980
BcnI CCSGG 2 cut(s) 1005, 1006
BcoDI GTCTC 3 cut(s) 417, 537, 626
BcuI ACTAGT 1 cut(s) 1096
BfaI CTAG 3 cut(s) 377, 638, 1097
BglI GCCNNNNNGGC 1 cut(s) 1006
BisI GCNGC 7 cut(s) 93, 171, 270, 381, 813, 975, 984
BlsI GCNGC 7 cut(s) 94, 172, 271, 382, 814, 976, 985
Bme1390I CCNGG 6 cut(s) 18, 539, 768, 980, 1005, 1006
BmeT110I CYCGRG 1 cut(s) 1004
BmiI GGNNCC 4 cut(s) 83, 684, 993, 1154
BmrFI CCNGG 6 cut(s) 18, 539, 768, 980, 1005, 1006
BmsI GCATC 3 cut(s) 77, 382, 694
BoxI GACNNNNGTC 1 cut(s) 638
BpmI CTGGAG 1 cut(s) 789
Bpu10I CCTNAGC 1 cut(s) 321
BpuMI CCSGG 2 cut(s) 1005, 1006
BsaAI YACGTR 1 cut(s) 1174
BsaJI CCNNGG 5 cut(s) 17, 368, 538, 978, 1004
BsaXI ACNNNNNCTCC 4 cut(s) 412, 442, 534, 564
Bsc4I CCNNNNNNNGG 2 cut(s) 169, 770
Bse1I ACTGG 1 cut(s) 885
Bse3DI GCAATG 3 cut(s) 532, 729, 945
BseBI CCWGG 4 cut(s) 18, 539, 768, 980
BseDI CCNNGG 5 cut(s) 17, 368, 538, 978, 1004
BseGI GGATG 2 cut(s) 132, 361
BseLI CCNNNNNNNGG 2 cut(s) 169, 770
BseMI GCAATG 3 cut(s) 532, 729, 945
BseMII CTCAG 3 cut(s) 257, 621, 873
BseNI ACTGG 1 cut(s) 885
BseRI GAGGAG 1 cut(s) 629
BseXI GCAGC 6 cut(s) 104, 281, 367, 824, 986, 995
Bsh1236I CGCG 1 cut(s) 926
BshFI GGCC 1 cut(s) 252
BsiHKCI CYCGRG 1 cut(s) 1004
BsiSI CCGG 1 cut(s) 1005
BslI CCNNNNNNNGG 2 cut(s) 169, 770
BsmAI GTCTC 3 cut(s) 417, 537, 626
BsmBI CGTCTC 1 cut(s) 626
BsnI GGCC 1 cut(s) 252
BsoBI CYCGRG 1 cut(s) 1004
Bsp143I GATC 3 cut(s) 618, 682, 1152
BspACI CCGC 3 cut(s) 170, 764, 924
BspANI GGCC 1 cut(s) 252
BspCNI CTCAG 3 cut(s) 256, 622, 872
BspFNI CGCG 1 cut(s) 926
BspHI TCATGA 1 cut(s) 1137
BspLI GGNNCC 4 cut(s) 83, 684, 993, 1154
BspPI GGATC 4 cut(s) 677, 690, 1147, 1160
BsrDI GCAATG 3 cut(s) 532, 729, 945
BsrI ACTGG 1 cut(s) 885
BssECI CCNNGG 5 cut(s) 17, 368, 538, 978, 1004
BssMI GATC 3 cut(s) 618, 682, 1152
BssT1I CCWWGG 1 cut(s) 368
Bst2UI CCWGG 4 cut(s) 18, 539, 768, 980
Bst4CI ACNGT 4 cut(s) 428, 727, 739, 1051
BstBAI YACGTR 1 cut(s) 1174
BstC8I GCNNGC 3 cut(s) 327, 486, 672
BstDEI CTNAG 4 cut(s) 243, 321, 630, 859
BstF5I GGATG 2 cut(s) 132, 361
BstFNI CGCG 1 cut(s) 926
BstHHI GCGC 1 cut(s) 1094
BstKTI GATC 3 cut(s) 621, 685, 1155
BstMAI GTCTC 3 cut(s) 417, 537, 626
BstMBI GATC 3 cut(s) 618, 682, 1152
BstMWI GCNNNNNNNGC 7 cut(s) 176, 266, 531, 971, 980, 983, 1006
BstNI CCWGG 4 cut(s) 18, 539, 768, 980
BstNSI RCATGY 1 cut(s) 269
BstPAI GACNNNNGTC 1 cut(s) 638
BstSCI CCNGG 6 cut(s) 16, 537, 766, 978, 1003, 1004
BstUI CGCG 1 cut(s) 926
BstV1I GCAGC 6 cut(s) 104, 281, 367, 824, 986, 995
BstX2I RGATCY 2 cut(s) 682, 1152
BstYI RGATCY 2 cut(s) 682, 1152
BsuRI GGCC 1 cut(s) 252
BtsCI GGATG 2 cut(s) 132, 361
BtsI GCAGTG 1 cut(s) 993
BtsIMutI CAGTG 3 cut(s) 71, 867, 993
Cac8I GCNNGC 3 cut(s) 327, 486, 672
CciI TCATGA 1 cut(s) 1137
CfoI GCGC 1 cut(s) 1094
Cfr9I CCCGGG 1 cut(s) 1004
CseI GACGC 2 cut(s) 643, 1109
Csp6I GTAC 3 cut(s) 304, 624, 854
CviAII CATG 2 cut(s) 266, 1138
CviQI GTAC 3 cut(s) 304, 624, 854
DdeI CTNAG 4 cut(s) 243, 321, 630, 859
DpnI GATC 3 cut(s) 620, 684, 1154
DpnII GATC 3 cut(s) 618, 682, 1152
DraI TTTAAA 1 cut(s) 778
Eco130I CCWWGG 1 cut(s) 368
Eco32I GATATC 1 cut(s) 894
Eco88I CYCGRG 1 cut(s) 1004
EcoRII CCWGG 4 cut(s) 16, 537, 766, 978
EcoRV GATATC 1 cut(s) 894
EcoT14I CCWWGG 1 cut(s) 368
ErhI CCWWGG 1 cut(s) 368
Esp3I CGTCTC 1 cut(s) 626
FaeI CATG 2 cut(s) 269, 1141
FalI AAGNNNNNCTT 2 cut(s) 69, 101
FatI CATG 2 cut(s) 265, 1137
FauI CCCGC 2 cut(s) 771, 931
FauNDI CATATG 1 cut(s) 175
Fnu4HI GCNGC 7 cut(s) 93, 171, 270, 381, 813, 975, 984
FokI GGATG 2 cut(s) 119, 368
Fsp4HI GCNGC 7 cut(s) 93, 171, 270, 381, 813, 975, 984
FspBI CTAG 3 cut(s) 377, 638, 1097
GlaI GCGC 1 cut(s) 1093
GluI GCNGC 7 cut(s) 93, 171, 270, 381, 813, 975, 984
GsuI CTGGAG 1 cut(s) 789
HaeIII GGCC 1 cut(s) 252
HapII CCGG 1 cut(s) 1005
HgaI GACGC 2 cut(s) 643, 1109
HhaI GCGC 1 cut(s) 1094
Hin1II CATG 2 cut(s) 269, 1141
Hin6I GCGC 1 cut(s) 1092
HinP1I GCGC 1 cut(s) 1092
HindIII AAGCTT 1 cut(s) 323
HinfI GANTC 6 cut(s) 52, 106, 208, 605, 881, 928
HpaII CCGG 1 cut(s) 1005
HphI GGTGA 1 cut(s) 970
Hpy166II GTNNAC 1 cut(s) 51
Hpy188I TCNGA 6 cut(s) 246, 631, 682, 687, 891, 1060
Hpy188III TCNNGA 5 cut(s) 9, 221, 595, 1138, 1165
Hpy8I GTNNAC 1 cut(s) 51
Hpy99I CGWCG 2 cut(s) 727, 1046
HpyAV CCTTC 3 cut(s) 700, 859, 1143
HpyCH4III ACNGT 4 cut(s) 428, 727, 739, 1051
HpyCH4IV ACGT 4 cut(s) 165, 214, 626, 1173
HpyCH4V TGCA 6 cut(s) 179, 231, 269, 466, 670, 734
HpyF10VI GCNNNNNNNGC 7 cut(s) 176, 266, 531, 971, 980, 983, 1006
HpyF3I CTNAG 4 cut(s) 243, 321, 630, 859
HpySE526I ACGT 4 cut(s) 165, 214, 626, 1173
Hsp92II CATG 2 cut(s) 269, 1141
HspAI GCGC 1 cut(s) 1092
Kzo9I GATC 3 cut(s) 618, 682, 1152
LmnI GCTCC 1 cut(s) 1071
Lsp1109I GCAGC 6 cut(s) 104, 281, 367, 824, 986, 995
LweI GCATC 3 cut(s) 77, 382, 694
MaeI CTAG 3 cut(s) 377, 638, 1097
MaeII ACGT 4 cut(s) 165, 214, 626, 1173
MaeIII GTNAC 3 cut(s) 128, 238, 739
MalI GATC 3 cut(s) 620, 684, 1154
MboI GATC 3 cut(s) 618, 682, 1152
MboII GAAGA 2 cut(s) 513, 794
MfeI CAATTG 1 cut(s) 232
MflI RGATCY 2 cut(s) 682, 1152
MluCI AATT 9 cut(s) 112, 195, 232, 402, 458, 599, 937, 1083, 1176
MlyI GAGTC 2 cut(s) 46, 937
MmeI TCCRAC 1 cut(s) 710
MnlI CCTC 3 cut(s) 607, 764, 1134
MseI TTAA 7 cut(s) 416, 777, 800, 837, 936, 1020, 1180
MspI CCGG 1 cut(s) 1005
MspR9I CCNGG 6 cut(s) 18, 539, 768, 980, 1005, 1006
MunI CAATTG 1 cut(s) 232
MvaI CCWGG 4 cut(s) 18, 539, 768, 980
MvnI CGCG 1 cut(s) 926
MwoI GCNNNNNNNGC 7 cut(s) 176, 266, 531, 971, 980, 983, 1006
NciI CCSGG 2 cut(s) 1005, 1006
NdeI CATATG 1 cut(s) 175
NdeII GATC 3 cut(s) 618, 682, 1152
NlaIII CATG 2 cut(s) 269, 1141
NlaIV GGNNCC 4 cut(s) 83, 684, 993, 1154
NmuCI GTSAC 1 cut(s) 238
NspI RCATGY 1 cut(s) 269
PagI TCATGA 1 cut(s) 1137
PfeI GAWTC 4 cut(s) 106, 208, 605, 881
PflFI GACNNNGTC 1 cut(s) 548
PkrI GCNGC 7 cut(s) 94, 172, 271, 382, 814, 976, 985
PleI GAGTC 2 cut(s) 46, 936
PpsI GAGTC 2 cut(s) 46, 936
Ppu21I YACGTR 1 cut(s) 1174
PshAI GACNNNNGTC 1 cut(s) 638
PshBI ATTAAT 1 cut(s) 936
PsiI TTATAA 1 cut(s) 338
Psp1406I AACGTT 1 cut(s) 214
Psp6I CCWGG 4 cut(s) 16, 537, 766, 978
PspGI CCWGG 4 cut(s) 16, 537, 766, 978
PspN4I GGNNCC 4 cut(s) 83, 684, 993, 1154
PsuI RGATCY 2 cut(s) 682, 1152
PsyI GACNNNGTC 1 cut(s) 548
RsaI GTAC 3 cut(s) 305, 625, 855
RsaNI GTAC 3 cut(s) 304, 624, 854
SaqAI TTAA 7 cut(s) 416, 777, 800, 837, 936, 1020, 1180
SatI GCNGC 7 cut(s) 93, 171, 270, 381, 813, 975, 984
Sau3AI GATC 3 cut(s) 618, 682, 1152
SchI GAGTC 2 cut(s) 46, 937
ScrFI CCNGG 6 cut(s) 18, 539, 768, 980, 1005, 1006
SfaNI GCATC 3 cut(s) 77, 382, 694
SmaI CCCGGG 1 cut(s) 1006
SpeI ACTAGT 1 cut(s) 1096
Sse9I AATT 9 cut(s) 112, 195, 232, 402, 458, 599, 937, 1083, 1176
SsiI CCGC 3 cut(s) 170, 764, 924
SspI AATATT 1 cut(s) 1025
SspMI CTAG 3 cut(s) 377, 638, 1097
StyD4I CCNGG 6 cut(s) 16, 537, 766, 978, 1003, 1004
StyI CCWWGG 1 cut(s) 368
TaaI ACNGT 4 cut(s) 428, 727, 739, 1051
TaiI ACGT 4 cut(s) 168, 217, 629, 1176
TasI AATT 9 cut(s) 112, 195, 232, 402, 458, 599, 937, 1083, 1176
TatI WGTACW 1 cut(s) 303
TauI GCSGC 1 cut(s) 173
TfiI GAWTC 4 cut(s) 106, 208, 605, 881
Tru1I TTAA 7 cut(s) 416, 777, 800, 837, 936, 1020, 1180
Tru9I TTAA 7 cut(s) 416, 777, 800, 837, 936, 1020, 1180
TscAI CASTG 3 cut(s) 78, 867, 993
TseFI GTSAC 1 cut(s) 238
TseI GCWGC 6 cut(s) 92, 269, 380, 812, 974, 983
Tsp45I GTSAC 1 cut(s) 238
TspDTI ATGAA 2 cut(s) 54, 894
TspMI CCCGGG 1 cut(s) 1004
TspRI CASTG 3 cut(s) 78, 867, 993
Tth111I GACNNNGTC 1 cut(s) 548
VspI ATTAAT 1 cut(s) 936
XapI RAATTY 3 cut(s) 112, 458, 599
XceI RCATGY 1 cut(s) 269
XcmI CCANNNNNNNNNTGG 1 cut(s) 952
XmaI CCCGGG 1 cut(s) 1004
XspI CTAG 3 cut(s) 377, 638, 1097
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.